Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048092.t1 | XP_013454911.1 | 95.3 | 532 | 25 | 0 | 1 | 532 | 1 | 532 | 2.90E-305 | 1057 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048092.t1 | Q3HRQ2 | 72.4 | 514 | 137 | 2 | 22 | 531 | 9 | 521 | 1.5e-225 | 783.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048092.t1 | A0A072UGT2 | 95.3 | 532 | 25 | 0 | 1 | 532 | 1 | 532 | 2.1e-305 | 1057.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene048092 | MS.gene27027 | PPI |
| MS.gene048092 | MS.gene69423 | PPI |
| MS.gene048092 | MS.gene63972 | PPI |
| MS.gene048092 | MS.gene42280 | PPI |
| MS.gene048092 | MS.gene82837 | PPI |
| MS.gene048092 | MS.gene014446 | PPI |
| MS.gene048092 | MS.gene064736 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048092.t1 | MTR_4g019520 | 95.301 | 532 | 25 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1004 |
| MS.gene048092.t1 | MTR_7g114530 | 46.654 | 523 | 258 | 11 | 28 | 531 | 49 | 569 | 1.98e-153 | 451 |
| MS.gene048092.t1 | MTR_1g023570 | 45.367 | 518 | 264 | 11 | 28 | 531 | 30 | 542 | 2.01e-151 | 444 |
| MS.gene048092.t1 | MTR_5g038410 | 43.889 | 540 | 248 | 14 | 42 | 531 | 1 | 535 | 1.68e-148 | 437 |
| MS.gene048092.t1 | MTR_3g113210 | 45.265 | 528 | 259 | 14 | 28 | 531 | 33 | 554 | 7.27e-148 | 436 |
| MS.gene048092.t1 | MTR_6g004960 | 44.316 | 519 | 266 | 10 | 32 | 531 | 1 | 515 | 2.46e-147 | 433 |
| MS.gene048092.t1 | MTR_3g075520 | 42.941 | 510 | 271 | 10 | 42 | 532 | 1 | 509 | 1.81e-136 | 405 |
| MS.gene048092.t1 | MTR_8g102900 | 41.065 | 526 | 285 | 11 | 28 | 532 | 112 | 633 | 1.26e-135 | 407 |
| MS.gene048092.t1 | MTR_6g088300 | 40.977 | 532 | 285 | 11 | 28 | 532 | 56 | 585 | 9.58e-132 | 395 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048092.t1 | AT3G53950 | 69.434 | 530 | 154 | 3 | 9 | 531 | 15 | 543 | 0.0 | 768 |
| MS.gene048092.t1 | AT1G75620 | 47.969 | 517 | 253 | 11 | 28 | 532 | 35 | 547 | 1.89e-160 | 468 |
| MS.gene048092.t1 | AT3G57620 | 46.035 | 517 | 257 | 12 | 30 | 531 | 37 | 546 | 7.49e-158 | 461 |
| MS.gene048092.t1 | AT1G19900 | 44.894 | 519 | 269 | 10 | 28 | 531 | 31 | 547 | 9.16e-150 | 441 |
| MS.gene048092.t1 | AT1G14430 | 45.355 | 549 | 274 | 14 | 6 | 531 | 19 | 564 | 2.85e-148 | 437 |
| MS.gene048092.t1 | AT5G19580 | 41.588 | 529 | 284 | 13 | 22 | 531 | 71 | 593 | 2.33e-130 | 392 |
| MS.gene048092.t1 | AT1G67290 | 41.333 | 525 | 283 | 13 | 27 | 531 | 95 | 614 | 2.08e-128 | 388 |
Find 171 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGGTGGCACGTGCTGATTT+TGG | 0.269002 | 4.4:-81738167 | None:intergenic |
| ACACCATACAACACCGTTTC+AGG | 0.273365 | 4.4:-81739418 | None:intergenic |
| GGGATTATTGAAGTGAATTT+AGG | 0.275605 | 4.4:+81739481 | MS.gene048092:CDS |
| ACCGGTTGGGTTACGGTTCA+TGG | 0.288813 | 4.4:+81739189 | MS.gene048092:CDS |
| AATCACACGGGTTGAATATT+CGG | 0.293301 | 4.4:-81738502 | None:intergenic |
| TAACGAAAATCGTGTGGTTC+GGG | 0.310975 | 4.4:+81738808 | MS.gene048092:CDS |
| TTGAGGCTATACCTGCGTTT+TGG | 0.317464 | 4.4:-81738214 | None:intergenic |
| TGCATTTCTTGAACGGAATA+CGG | 0.349741 | 4.4:+81738952 | MS.gene048092:CDS |
| TAAAGTCTTGGCACAGTGCC+TGG | 0.354244 | 4.4:-81739220 | None:intergenic |
| ATCCGACCCGGTTTGGGAAA+TGG | 0.361268 | 4.4:+81739018 | MS.gene048092:CDS |
| GACGGGATCCGACCCGGTTT+GGG | 0.365091 | 4.4:+81739012 | MS.gene048092:CDS |
| CGACGGGATCCGACCCGGTT+TGG | 0.384357 | 4.4:+81739011 | MS.gene048092:CDS |
| TCGGGTTTACCCGGAGTTAA+CGG | 0.387975 | 4.4:+81738826 | MS.gene048092:CDS |
| CGGGTTTACCCGGAGTTAAC+GGG | 0.388275 | 4.4:+81738827 | MS.gene048092:CDS |
| ATTATCCATTTGTGTATCTT+CGG | 0.390138 | 4.4:-81738708 | None:intergenic |
| TTATCCGTCCGCGGGGAGTT+CGG | 0.403982 | 4.4:+81738862 | MS.gene048092:CDS |
| CGTGTTTGCGAACACGAAAT+CGG | 0.404762 | 4.4:+81738772 | MS.gene048092:CDS |
| TGAGAGAATAATGGGTGATA+TGG | 0.406764 | 4.4:+81739054 | MS.gene048092:CDS |
| GTCAACGATTGGTCAAGCTT+GGG | 0.407088 | 4.4:+81739539 | MS.gene048092:CDS |
| TCCGGTTCATTTCTTCCAAA+CGG | 0.407288 | 4.4:+81738434 | MS.gene048092:CDS |
| TTTATATCGACCTGGTGAAC+CGG | 0.410632 | 4.4:+81739171 | MS.gene048092:CDS |
| CGCGGGGAGTTCGGTGATGC+TGG | 0.411630 | 4.4:+81738871 | MS.gene048092:CDS |
| TGCACCGCCAGGTTATTATA+TGG | 0.418499 | 4.4:+81739633 | MS.gene048092:CDS |
| TTAACGAAAATCGTGTGGTT+CGG | 0.425229 | 4.4:+81738807 | MS.gene048092:CDS |
| TTCAACCCGTGTGATTCAAC+CGG | 0.427789 | 4.4:+81738509 | MS.gene048092:CDS |
| TATGCCGTTTGAGAGAATAA+TGG | 0.427793 | 4.4:+81739045 | MS.gene048092:CDS |
| ACCGACACATGGTGCTCTTC+CGG | 0.428965 | 4.4:+81738416 | MS.gene048092:CDS |
| TCGTGTTCGCAAACACGAAA+AGG | 0.428988 | 4.4:-81738766 | None:intergenic |
| GTTGGCTCTGCGGTGGTCGA+TGG | 0.442039 | 4.4:+81739562 | MS.gene048092:CDS |
| TCTTCGGTTTCTTGCAGAAA+CGG | 0.444669 | 4.4:-81738692 | None:intergenic |
| AGTGTGCCTTTGCCAGTTGT+GGG | 0.448625 | 4.4:+81739460 | MS.gene048092:CDS |
| ACTAGAAGCTCCCACGTGCC+GGG | 0.449893 | 4.4:-81738191 | None:intergenic |
| ATTCAACCGGGTCATGCGAT+TGG | 0.450450 | 4.4:+81738522 | MS.gene048092:CDS |
| GACTAGAAGCTCCCACGTGC+CGG | 0.450544 | 4.4:-81738192 | None:intergenic |
| ATATCCTCCATTTCCCAAAC+CGG | 0.453250 | 4.4:-81739025 | None:intergenic |
| CTCCCACGTGCCGGGGAGGG+TGG | 0.454205 | 4.4:-81738183 | None:intergenic |
| ATCGACCTGGTGAACCGGTT+GGG | 0.456060 | 4.4:+81739176 | MS.gene048092:CDS |
| ATGCCGTTTGAGAGAATAAT+GGG | 0.461994 | 4.4:+81739046 | MS.gene048092:CDS |
| CGATGTTGGTTCGGTCTAAG+AGG | 0.463410 | 4.4:-81738271 | None:intergenic |
| GGTTCGGTCTAAGAGGATTA+CGG | 0.463695 | 4.4:-81738264 | None:intergenic |
| CTGGTGAACCGGTTGGGTTA+CGG | 0.466700 | 4.4:+81739182 | MS.gene048092:CDS |
| TCGTGTGGTTCGGGTTTACC+CGG | 0.467897 | 4.4:+81738817 | MS.gene048092:CDS |
| ACCATGAACCGTAACCCAAC+CGG | 0.468515 | 4.4:-81739190 | None:intergenic |
| AAACCGGTGGTGACTTAGAC+GGG | 0.468824 | 4.4:+81738468 | MS.gene048092:CDS |
| TTGCGGCGCATGGGAGTTGT+GGG | 0.473306 | 4.4:+81738978 | MS.gene048092:CDS |
| TTCACCAGGTCGATATAAAA+CGG | 0.477041 | 4.4:-81739167 | None:intergenic |
| GGGTTGGACCGATGTTGGTT+CGG | 0.478378 | 4.4:-81738280 | None:intergenic |
| CTCGGTCCACCCGTTAACTC+CGG | 0.479222 | 4.4:-81738836 | None:intergenic |
| TCAGGCACTTCGAATATCTC+AGG | 0.481224 | 4.4:-81739400 | None:intergenic |
| ACCGTTTGGAAGAAATGAAC+CGG | 0.483003 | 4.4:-81738435 | None:intergenic |
| ATTGCGGCGCATGGGAGTTG+TGG | 0.483609 | 4.4:+81738977 | MS.gene048092:CDS |
| TTCAACCGGGTCATGCGATT+GGG | 0.484013 | 4.4:+81738523 | MS.gene048092:CDS |
| CCGGTTCACTAAAACCAAAC+CGG | 0.484133 | 4.4:+81738328 | MS.gene048092:CDS |
| GTGCAACCATCCCACTCGGT+GGG | 0.485681 | 4.4:-81739615 | None:intergenic |
| GATGCGGTGGTTGTTGTTTG+TGG | 0.487523 | 4.4:+81738914 | MS.gene048092:CDS |
| AGTGGGATGGTTGCACCGCC+AGG | 0.487641 | 4.4:+81739622 | MS.gene048092:CDS |
| AAGCTCCCACGTGCCGGGGA+GGG | 0.488068 | 4.4:-81738186 | None:intergenic |
| GGTCAACGATTGGTCAAGCT+TGG | 0.488405 | 4.4:+81739538 | MS.gene048092:CDS |
| CTCTTCCCAATCGCATGACC+CGG | 0.491639 | 4.4:-81738528 | None:intergenic |
| CGAATTTATTACCAGATGGA+AGG | 0.492234 | 4.4:+81739254 | MS.gene048092:CDS |
| ATGAGCGTAACAATCCGGTT+TGG | 0.492855 | 4.4:-81738342 | None:intergenic |
| TCGAATTAAGCGAAGGTCGT+TGG | 0.493274 | 4.4:+81738561 | MS.gene048092:CDS |
| AATACGGATATTGCGGCGCA+TGG | 0.500268 | 4.4:+81738968 | MS.gene048092:CDS |
| CGATTGGTCAAGCTTGGGGT+TGG | 0.500671 | 4.4:+81739544 | MS.gene048092:CDS |
| TGGTCGATGGTGTTGGAAGG+TGG | 0.502054 | 4.4:+81739575 | MS.gene048092:CDS |
| ACTTCAATAATCCCCACAAC+TGG | 0.502199 | 4.4:-81739472 | None:intergenic |
| GTGCCACCCTCCCCGGCACG+TGG | 0.504038 | 4.4:+81738180 | MS.gene048092:CDS |
| TCAGCACGTGCCACCCTCCC+CGG | 0.505836 | 4.4:+81738173 | MS.gene048092:CDS |
| GAGTGTGCCTTTGCCAGTTG+TGG | 0.506333 | 4.4:+81739459 | MS.gene048092:CDS |
| GAGTTCGGTGATGCTGGCGT+TGG | 0.510473 | 4.4:+81738877 | MS.gene048092:CDS |
| CAAACCGGTGGTGACTTAGA+CGG | 0.512760 | 4.4:+81738467 | MS.gene048092:CDS |
| GCTAGTAAAACCCTTCCATC+TGG | 0.516105 | 4.4:-81739265 | None:intergenic |
| TCACCAGGTCGATATAAAAC+GGG | 0.517151 | 4.4:-81739166 | None:intergenic |
| ATGATGATGACGGAACCATC+TGG | 0.518424 | 4.4:-81738605 | None:intergenic |
| GTTTGTAAAAGTGAACCGTT+TGG | 0.519490 | 4.4:-81738449 | None:intergenic |
| TTAGGAAGAAGATGAACATA+TGG | 0.519523 | 4.4:-81738737 | None:intergenic |
| CCGAGGAATTATCCGTCCGC+GGG | 0.521080 | 4.4:+81738854 | MS.gene048092:CDS |
| TATCGACCTGGTGAACCGGT+TGG | 0.521135 | 4.4:+81739175 | MS.gene048092:CDS |
| CGTAACCCAACCGGTTCACC+AGG | 0.522888 | 4.4:-81739181 | None:intergenic |
| TCACCCATTATTCTCTCAAA+CGG | 0.523026 | 4.4:-81739049 | None:intergenic |
| GTTTGTGGCGGTGCTCAATA+CGG | 0.523510 | 4.4:+81738929 | MS.gene048092:CDS |
| CGGTGGTCGATGGTGTTGGA+AGG | 0.524502 | 4.4:+81739572 | MS.gene048092:CDS |
| AAGGTGGAGGATCCGATGTA+TGG | 0.526774 | 4.4:+81739591 | MS.gene048092:CDS |
| GTCATCATCATCGGTGGAAG+AGG | 0.527761 | 4.4:+81738617 | MS.gene048092:CDS |
| TCGGTCCACCCGTTAACTCC+GGG | 0.528086 | 4.4:-81738835 | None:intergenic |
| AGAAACCGAAGATACACAAA+TGG | 0.528804 | 4.4:+81738703 | MS.gene048092:CDS |
| TTTACGGGTTGGACCGATGT+TGG | 0.532259 | 4.4:-81738285 | None:intergenic |
| ACTGAATGAGCGTAACAATC+CGG | 0.533549 | 4.4:-81738347 | None:intergenic |
| TCTGCGGTGGTCGATGGTGT+TGG | 0.534258 | 4.4:+81739568 | MS.gene048092:CDS |
| GTGCCTGAAACGGTGTTGTA+TGG | 0.534746 | 4.4:+81739415 | MS.gene048092:CDS |
| ATTATAAATGGAGCTATGAA+AGG | 0.537384 | 4.4:+81739103 | MS.gene048092:CDS |
| TCGGTGATGCTGGCGTTGGA+AGG | 0.537808 | 4.4:+81738881 | MS.gene048092:CDS |
| CCCGCGGACGGATAATTCCT+CGG | 0.543468 | 4.4:-81738854 | None:intergenic |
| AATACGGTGCATTTCTTGAA+CGG | 0.544808 | 4.4:+81738945 | MS.gene048092:CDS |
| CAAGCTTGGGGTTGGCTCTG+CGG | 0.545621 | 4.4:+81739552 | MS.gene048092:CDS |
| GTGCCACACTTGGCACACCT+TGG | 0.553755 | 4.4:-81739669 | None:intergenic |
| ATTTATAATCAAAACATCAC+CGG | 0.555102 | 4.4:-81739089 | None:intergenic |
| AACACGAAAAGGTTACCGTT+AGG | 0.555856 | 4.4:-81738755 | None:intergenic |
| AAAGTCTTGGCACAGTGCCT+GGG | 0.557778 | 4.4:-81739219 | None:intergenic |
| TATGTTCATCTTCTTCCTAA+CGG | 0.558720 | 4.4:+81738740 | MS.gene048092:CDS |
| GATGGTTCCGTCATCATCAT+CGG | 0.561725 | 4.4:+81738608 | MS.gene048092:CDS |
| GCTTGGGGTTGGCTCTGCGG+TGG | 0.561916 | 4.4:+81739555 | MS.gene048092:CDS |
| GAAACGGTGTTGTATGGTGT+AGG | 0.562222 | 4.4:+81739421 | MS.gene048092:CDS |
| CACTCGGTGGGGCCATACAT+CGG | 0.564008 | 4.4:-81739603 | None:intergenic |
| GAAGCTCCCACGTGCCGGGG+AGG | 0.564391 | 4.4:-81738187 | None:intergenic |
| TGTATCCAACGTGCCACACT+TGG | 0.569532 | 4.4:-81739679 | None:intergenic |
| GAATTTATTACCAGATGGAA+GGG | 0.570517 | 4.4:+81739255 | MS.gene048092:CDS |
| TCAACGATTGGTCAAGCTTG+GGG | 0.570845 | 4.4:+81739540 | MS.gene048092:CDS |
| ACGAATCAAATTCTTCCAGA+TGG | 0.571165 | 4.4:+81738590 | MS.gene048092:CDS |
| TTATCTGAATCCAAATACTC+AGG | 0.573512 | 4.4:-81739364 | None:intergenic |
| CTAGAAGCTCCCACGTGCCG+GGG | 0.574028 | 4.4:-81738190 | None:intergenic |
| ATCACCGAACTCCCCGCGGA+CGG | 0.574564 | 4.4:-81738866 | None:intergenic |
| TTTGGGAGGAGTTTACGGGT+TGG | 0.577906 | 4.4:-81738296 | None:intergenic |
| AGAAGGCATATCACAAAGAG+AGG | 0.580613 | 4.4:-81738125 | None:intergenic |
| TAAAACGATAAAACACATGT+GGG | 0.581204 | 4.4:-81739297 | None:intergenic |
| GATGTATGGCCCCACCGAGT+GGG | 0.582898 | 4.4:+81739605 | MS.gene048092:CDS |
| GATATTCGAAGTGCCTGAAA+CGG | 0.583385 | 4.4:+81739405 | MS.gene048092:CDS |
| TTAAAACGATAAAACACATG+TGG | 0.585965 | 4.4:-81739298 | None:intergenic |
| AAACGGTGTTGTATGGTGTA+GGG | 0.586784 | 4.4:+81739422 | MS.gene048092:CDS |
| GGCGGTGCAACCATCCCACT+CGG | 0.587429 | 4.4:-81739619 | None:intergenic |
| TGCAACCATCCCACTCGGTG+GGG | 0.594099 | 4.4:-81739614 | None:intergenic |
| ACAGCGAATTTATTACCAGA+TGG | 0.594949 | 4.4:+81739250 | MS.gene048092:CDS |
| GGTGCAACCATCCCACTCGG+TGG | 0.596224 | 4.4:-81739616 | None:intergenic |
| TATCCTCCATTTCCCAAACC+GGG | 0.596564 | 4.4:-81739024 | None:intergenic |
| GATATGGTAATTCTACCAAC+CGG | 0.597681 | 4.4:+81739070 | MS.gene048092:CDS |
| TCGATGGTGTTGGAAGGTGG+AGG | 0.600846 | 4.4:+81739578 | MS.gene048092:CDS |
| ATAATCAAAACATCACCGGT+TGG | 0.601564 | 4.4:-81739085 | None:intergenic |
| CTCTTAGACCGAACCAACAT+CGG | 0.601639 | 4.4:+81738272 | MS.gene048092:CDS |
| GCTGTCGAATGATAAAGTCT+TGG | 0.602093 | 4.4:-81739232 | None:intergenic |
| CTCCATTTCCCAAACCGGGT+CGG | 0.602491 | 4.4:-81739020 | None:intergenic |
| ATGTGAAGAGTTGTATGAGA+AGG | 0.602817 | 4.4:-81738142 | None:intergenic |
| ATAATCCCCACAACTGGCAA+AGG | 0.604040 | 4.4:-81739466 | None:intergenic |
| ATTAGCGACGGGATCCGACC+CGG | 0.604219 | 4.4:+81739006 | MS.gene048092:CDS |
| ATACGGATATTGCGGCGCAT+GGG | 0.604957 | 4.4:+81738969 | MS.gene048092:CDS |
| CGGCGCATGGGAGTTGTGGG+CGG | 0.606382 | 4.4:+81738981 | MS.gene048092:CDS |
| TGCCACCCTCCCCGGCACGT+GGG | 0.606639 | 4.4:+81738181 | MS.gene048092:CDS |
| CATGACCCGGTTGAATCACA+CGG | 0.611488 | 4.4:-81738515 | None:intergenic |
| GAACCCGTCTAAGTCACCAC+CGG | 0.611682 | 4.4:-81738471 | None:intergenic |
| GTGTGCCTTTGCCAGTTGTG+GGG | 0.616116 | 4.4:+81739461 | MS.gene048092:CDS |
| TAAAGATGTTGAGTTTGCGA+CGG | 0.616862 | 4.4:+81739318 | MS.gene048092:CDS |
| TGTGGGCGGATATTAGCGAC+GGG | 0.620984 | 4.4:+81738995 | MS.gene048092:CDS |
| TCTTCCACCGATGATGATGA+CGG | 0.621819 | 4.4:-81738615 | None:intergenic |
| TGAACGGAATACGGATATTG+CGG | 0.624955 | 4.4:+81738961 | MS.gene048092:CDS |
| ACCGAGGAATTATCCGTCCG+CGG | 0.628281 | 4.4:+81738853 | MS.gene048092:CDS |
| TATGGCCCCACCGAGTGGGA+TGG | 0.638714 | 4.4:+81739609 | MS.gene048092:CDS |
| TTGTGGGCGGATATTAGCGA+CGG | 0.639903 | 4.4:+81738994 | MS.gene048092:CDS |
| GCGGTGGTTGTTGTTTGTGG+CGG | 0.641116 | 4.4:+81738917 | MS.gene048092:CDS |
| TCAACCCGTGTGATTCAACC+GGG | 0.642606 | 4.4:+81738510 | MS.gene048092:CDS |
| CGATGTATGGCCCCACCGAG+TGG | 0.643067 | 4.4:+81739604 | MS.gene048092:CDS |
| GTTTACCCGGAGTTAACGGG+TGG | 0.643181 | 4.4:+81738830 | MS.gene048092:CDS |
| CGACCCGGTTTGGGAAATGG+AGG | 0.646092 | 4.4:+81739021 | MS.gene048092:CDS |
| TGTTACTGTTGTGTGCATTG+AGG | 0.648238 | 4.4:-81738231 | None:intergenic |
| TGACTTTAACGAAAATCGTG+TGG | 0.648534 | 4.4:+81738802 | MS.gene048092:CDS |
| ATGGTGTTTGCTGTTAACCA+AGG | 0.651581 | 4.4:+81739652 | MS.gene048092:CDS |
| CGGAGTTAACGGGTGGACCG+AGG | 0.655464 | 4.4:+81738837 | MS.gene048092:CDS |
| GCAAACACCATATAATAACC+TGG | 0.656118 | 4.4:-81739640 | None:intergenic |
| GCATATCACAAAGAGAGGGA+TGG | 0.656871 | 4.4:-81738120 | None:intergenic |
| GGTTCCGTCATCATCATCGG+TGG | 0.657675 | 4.4:+81738611 | MS.gene048092:CDS |
| TATAAAACGGGATTCAAACA+CGG | 0.660384 | 4.4:-81739154 | None:intergenic |
| ACCGGAAGAGCACCATGTGT+CGG | 0.660505 | 4.4:-81738417 | None:intergenic |
| AAGAGCACCATGTGTCGGTG+AGG | 0.665534 | 4.4:-81738412 | None:intergenic |
| GAAGGCATATCACAAAGAGA+GGG | 0.667837 | 4.4:-81738124 | None:intergenic |
| AACGACGTCGAATTAAGCGA+AGG | 0.672371 | 4.4:+81738554 | MS.gene048092:CDS |
| GGAGCTATGAAAGGTACACA+AGG | 0.678870 | 4.4:+81739112 | MS.gene048092:CDS |
| ATGACCCGGTTGAATCACAC+GGG | 0.686842 | 4.4:-81738514 | None:intergenic |
| TAACCAAGGTGTGCCAAGTG+TGG | 0.694344 | 4.4:+81739666 | MS.gene048092:CDS |
| GTGTGCCAAGTGTGGCACGT+TGG | 0.703709 | 4.4:+81739674 | MS.gene048092:CDS |
| GAGCTTCTAGTCCAAAACGC+AGG | 0.708220 | 4.4:+81738203 | MS.gene048092:CDS |
| CGAGGAATTATCCGTCCGCG+GGG | 0.723364 | 4.4:+81738855 | MS.gene048092:CDS |
| CAGCATCACCGAACTCCCCG+CGG | 0.727234 | 4.4:-81738870 | None:intergenic |
| AACACCATATAATAACCTGG+CGG | 0.782194 | 4.4:-81739637 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATAATCAAAACATCAC+CGG | - | chr4.4:81739092-81739111 | None:intergenic | 20.0% |
| ! | ATTATAAATGGAGCTATGAA+AGG | + | chr4.4:81739103-81739122 | MS.gene048092:CDS | 25.0% |
| ! | ATTATCCATTTGTGTATCTT+CGG | - | chr4.4:81738711-81738730 | None:intergenic | 25.0% |
| ! | TAAAACGATAAAACACATGT+GGG | - | chr4.4:81739300-81739319 | None:intergenic | 25.0% |
| ! | TTAAAACGATAAAACACATG+TGG | - | chr4.4:81739301-81739320 | None:intergenic | 25.0% |
| !!! | GGTGATGTTTTGATTATAAA+TGG | + | chr4.4:81739091-81739110 | MS.gene048092:CDS | 25.0% |
| GAAAAACTATGTGTAGCAAA+AGG | - | chr4.4:81739514-81739533 | None:intergenic | 30.0% | |
| GAATTTATTACCAGATGGAA+GGG | + | chr4.4:81739255-81739274 | MS.gene048092:CDS | 30.0% | |
| GGGATTATTGAAGTGAATTT+AGG | + | chr4.4:81739481-81739500 | MS.gene048092:CDS | 30.0% | |
| TATAAAACGGGATTCAAACA+CGG | - | chr4.4:81739157-81739176 | None:intergenic | 30.0% | |
| TATGTTCATCTTCTTCCTAA+CGG | + | chr4.4:81738740-81738759 | MS.gene048092:CDS | 30.0% | |
| TTAGGAAGAAGATGAACATA+TGG | - | chr4.4:81738740-81738759 | None:intergenic | 30.0% | |
| TTATCTGAATCCAAATACTC+AGG | - | chr4.4:81739367-81739386 | None:intergenic | 30.0% | |
| AACACCATATAATAACCTGG+CGG | - | chr4.4:81739640-81739659 | None:intergenic | 35.0% | |
| AATACGGTGCATTTCTTGAA+CGG | + | chr4.4:81738945-81738964 | MS.gene048092:CDS | 35.0% | |
| ACAGCGAATTTATTACCAGA+TGG | + | chr4.4:81739250-81739269 | MS.gene048092:CDS | 35.0% | |
| ACGAATCAAATTCTTCCAGA+TGG | + | chr4.4:81738590-81738609 | MS.gene048092:CDS | 35.0% | |
| AGAAACCGAAGATACACAAA+TGG | + | chr4.4:81738703-81738722 | MS.gene048092:CDS | 35.0% | |
| ATAATCAAAACATCACCGGT+TGG | - | chr4.4:81739088-81739107 | None:intergenic | 35.0% | |
| ATGTGAAGAGTTGTATGAGA+AGG | - | chr4.4:81738145-81738164 | None:intergenic | 35.0% | |
| CGAATTTATTACCAGATGGA+AGG | + | chr4.4:81739254-81739273 | MS.gene048092:CDS | 35.0% | |
| GATATGGTAATTCTACCAAC+CGG | + | chr4.4:81739070-81739089 | MS.gene048092:CDS | 35.0% | |
| GCAAACACCATATAATAACC+TGG | - | chr4.4:81739643-81739662 | None:intergenic | 35.0% | |
| GTTTGTAAAAGTGAACCGTT+TGG | - | chr4.4:81738452-81738471 | None:intergenic | 35.0% | |
| TAAAGATGTTGAGTTTGCGA+CGG | + | chr4.4:81739318-81739337 | MS.gene048092:CDS | 35.0% | |
| TCACCCATTATTCTCTCAAA+CGG | - | chr4.4:81739052-81739071 | None:intergenic | 35.0% | |
| TGACTTTAACGAAAATCGTG+TGG | + | chr4.4:81738802-81738821 | MS.gene048092:CDS | 35.0% | |
| TGCATTTCTTGAACGGAATA+CGG | + | chr4.4:81738952-81738971 | MS.gene048092:CDS | 35.0% | |
| TTAACGAAAATCGTGTGGTT+CGG | + | chr4.4:81738807-81738826 | MS.gene048092:CDS | 35.0% | |
| TTCACCAGGTCGATATAAAA+CGG | - | chr4.4:81739170-81739189 | None:intergenic | 35.0% | |
| ! | AATCACACGGGTTGAATATT+CGG | - | chr4.4:81738505-81738524 | None:intergenic | 35.0% |
| ! | ATGCCGTTTGAGAGAATAAT+GGG | + | chr4.4:81739046-81739065 | MS.gene048092:CDS | 35.0% |
| ! | GCTACACATAGTTTTTCACA+GGG | + | chr4.4:81739517-81739536 | MS.gene048092:CDS | 35.0% |
| ! | TATGCCGTTTGAGAGAATAA+TGG | + | chr4.4:81739045-81739064 | MS.gene048092:CDS | 35.0% |
| ! | TGCTACACATAGTTTTTCAC+AGG | + | chr4.4:81739516-81739535 | MS.gene048092:CDS | 35.0% |
| ! | TTTTACCCGAAACGCAAAAA+CGG | + | chr4.4:81738656-81738675 | MS.gene048092:CDS | 35.0% |
| !! | AACGGTTCACTTTTACAAAC+CGG | + | chr4.4:81738452-81738471 | MS.gene048092:CDS | 35.0% |
| !! | TGAGAGAATAATGGGTGATA+TGG | + | chr4.4:81739054-81739073 | MS.gene048092:CDS | 35.0% |
| !!! | ACAAGGTTTTGAAATGGGTT+CGG | + | chr4.4:81739129-81739148 | MS.gene048092:CDS | 35.0% |
| !!! | AGGTACACAAGGTTTTGAAA+TGG | + | chr4.4:81739123-81739142 | MS.gene048092:CDS | 35.0% |
| !!! | GGTACACAAGGTTTTGAAAT+GGG | + | chr4.4:81739124-81739143 | MS.gene048092:CDS | 35.0% |
| AACACGAAAAGGTTACCGTT+AGG | - | chr4.4:81738758-81738777 | None:intergenic | 40.0% | |
| ACCGTTTGGAAGAAATGAAC+CGG | - | chr4.4:81738438-81738457 | None:intergenic | 40.0% | |
| ACTGAATGAGCGTAACAATC+CGG | - | chr4.4:81738350-81738369 | None:intergenic | 40.0% | |
| ACTTCAATAATCCCCACAAC+TGG | - | chr4.4:81739475-81739494 | None:intergenic | 40.0% | |
| ATATCCTCCATTTCCCAAAC+CGG | - | chr4.4:81739028-81739047 | None:intergenic | 40.0% | |
| GCTGTCGAATGATAAAGTCT+TGG | - | chr4.4:81739235-81739254 | None:intergenic | 40.0% | |
| TAAAAATCCTCACCGACACA+TGG | + | chr4.4:81738405-81738424 | MS.gene048092:CDS | 40.0% | |
| TAACGAAAATCGTGTGGTTC+GGG | + | chr4.4:81738808-81738827 | MS.gene048092:CDS | 40.0% | |
| TCACCAGGTCGATATAAAAC+GGG | - | chr4.4:81739169-81739188 | None:intergenic | 40.0% | |
| TCCGGTTCATTTCTTCCAAA+CGG | + | chr4.4:81738434-81738453 | MS.gene048092:CDS | 40.0% | |
| TCTTCGGTTTCTTGCAGAAA+CGG | - | chr4.4:81738695-81738714 | None:intergenic | 40.0% | |
| TGAACGGAATACGGATATTG+CGG | + | chr4.4:81738961-81738980 | MS.gene048092:CDS | 40.0% | |
| TGTTACTGTTGTGTGCATTG+AGG | - | chr4.4:81738234-81738253 | None:intergenic | 40.0% | |
| TTTATATCGACCTGGTGAAC+CGG | + | chr4.4:81739171-81739190 | MS.gene048092:CDS | 40.0% | |
| ! | AATCCCGTTTTATATCGACC+TGG | + | chr4.4:81739163-81739182 | MS.gene048092:CDS | 40.0% |
| ! | AGAAGGCATATCACAAAGAG+AGG | - | chr4.4:81738128-81738147 | None:intergenic | 40.0% |
| ! | AGATGGAAGGGTTTTACTAG+CGG | + | chr4.4:81739267-81739286 | MS.gene048092:CDS | 40.0% |
| ! | GAAGGCATATCACAAAGAGA+GGG | - | chr4.4:81738127-81738146 | None:intergenic | 40.0% |
| ! | GATATTCGAAGTGCCTGAAA+CGG | + | chr4.4:81739405-81739424 | MS.gene048092:CDS | 40.0% |
| ! | GGAAGGTGAATTTTCTGATG+CGG | + | chr4.4:81738898-81738917 | MS.gene048092:CDS | 40.0% |
| ! | TTTTTCACAGGGTCAACGAT+TGG | + | chr4.4:81739528-81739547 | MS.gene048092:CDS | 40.0% |
| !! | AAACGGTGTTGTATGGTGTA+GGG | + | chr4.4:81739422-81739441 | MS.gene048092:CDS | 40.0% |
| !! | ATGGTGTTTGCTGTTAACCA+AGG | + | chr4.4:81739652-81739671 | MS.gene048092:CDS | 40.0% |
| !! | GTGTCGGTGAGGATTTTTAA+GGG | - | chr4.4:81738404-81738423 | None:intergenic | 40.0% |
| !! | TGTCGGTGAGGATTTTTAAG+GGG | - | chr4.4:81738403-81738422 | None:intergenic | 40.0% |
| !! | TGTGTCGGTGAGGATTTTTA+AGG | - | chr4.4:81738405-81738424 | None:intergenic | 40.0% |
| !!! | GGTTTTTTGGGAGGAGTTTA+CGG | - | chr4.4:81738304-81738323 | None:intergenic | 40.0% |
| !!! | GTTTTTTGGGAGGAGTTTAC+GGG | - | chr4.4:81738303-81738322 | None:intergenic | 40.0% |
| !!! | TGAACCGGCAATGGTTTTTT+GGG | - | chr4.4:81738316-81738335 | None:intergenic | 40.0% |
| AACGACGTCGAATTAAGCGA+AGG | + | chr4.4:81738554-81738573 | MS.gene048092:CDS | 45.0% | |
| ACACCATACAACACCGTTTC+AGG | - | chr4.4:81739421-81739440 | None:intergenic | 45.0% | |
| ATAATCCCCACAACTGGCAA+AGG | - | chr4.4:81739469-81739488 | None:intergenic | 45.0% | |
| ATGAGCGTAACAATCCGGTT+TGG | - | chr4.4:81738345-81738364 | None:intergenic | 45.0% | |
| CCGGTTCACTAAAACCAAAC+CGG | + | chr4.4:81738328-81738347 | MS.gene048092:CDS | 45.0% | |
| CGTGTTTGCGAACACGAAAT+CGG | + | chr4.4:81738772-81738791 | MS.gene048092:CDS | 45.0% | |
| CTCTTAGACCGAACCAACAT+CGG | + | chr4.4:81738272-81738291 | MS.gene048092:CDS | 45.0% | |
| GATGGTTCCGTCATCATCAT+CGG | + | chr4.4:81738608-81738627 | MS.gene048092:CDS | 45.0% | |
| GCATATCACAAAGAGAGGGA+TGG | - | chr4.4:81738123-81738142 | None:intergenic | 45.0% | |
| GCTAGTAAAACCCTTCCATC+TGG | - | chr4.4:81739268-81739287 | None:intergenic | 45.0% | |
| TATCCTCCATTTCCCAAACC+GGG | - | chr4.4:81739027-81739046 | None:intergenic | 45.0% | |
| TCAGGCACTTCGAATATCTC+AGG | - | chr4.4:81739403-81739422 | None:intergenic | 45.0% | |
| TCCTCCCAAAAAACCATTGC+CGG | + | chr4.4:81738309-81738328 | MS.gene048092:CDS | 45.0% | |
| TCGAATTAAGCGAAGGTCGT+TGG | + | chr4.4:81738561-81738580 | MS.gene048092:CDS | 45.0% | |
| TCGTGTTCGCAAACACGAAA+AGG | - | chr4.4:81738769-81738788 | None:intergenic | 45.0% | |
| TGCACCGCCAGGTTATTATA+TGG | + | chr4.4:81739633-81739652 | MS.gene048092:CDS | 45.0% | |
| TTCAACCCGTGTGATTCAAC+CGG | + | chr4.4:81738509-81738528 | MS.gene048092:CDS | 45.0% | |
| ! | AGCGTTTTCGCCTGAGTATT+TGG | + | chr4.4:81739354-81739373 | MS.gene048092:CDS | 45.0% |
| ! | AGGTGAATTTTCTGATGCGG+TGG | + | chr4.4:81738901-81738920 | MS.gene048092:CDS | 45.0% |
| ! | GATGGAAGGGTTTTACTAGC+GGG | + | chr4.4:81739268-81739287 | MS.gene048092:CDS | 45.0% |
| ! | GGAGCTATGAAAGGTACACA+AGG | + | chr4.4:81739112-81739131 | MS.gene048092:CDS | 45.0% |
| ! | GGTTCGGTCTAAGAGGATTA+CGG | - | chr4.4:81738267-81738286 | None:intergenic | 45.0% |
| ! | GTCAACGATTGGTCAAGCTT+GGG | + | chr4.4:81739539-81739558 | MS.gene048092:CDS | 45.0% |
| ! | TCAACGATTGGTCAAGCTTG+GGG | + | chr4.4:81739540-81739559 | MS.gene048092:CDS | 45.0% |
| ! | TCTTCCACCGATGATGATGA+CGG | - | chr4.4:81738618-81738637 | None:intergenic | 45.0% |
| ! | TTGAGGCTATACCTGCGTTT+TGG | - | chr4.4:81738217-81738236 | None:intergenic | 45.0% |
| !! | ACGACACCGTTTTTGCGTTT+CGG | - | chr4.4:81738665-81738684 | None:intergenic | 45.0% |
| !! | ATGATGATGACGGAACCATC+TGG | - | chr4.4:81738608-81738627 | None:intergenic | 45.0% |
| !! | GAAACGGTGTTGTATGGTGT+AGG | + | chr4.4:81739421-81739440 | MS.gene048092:CDS | 45.0% |
| !! | GGTTCACTTTTACAAACCGG+TGG | + | chr4.4:81738455-81738474 | MS.gene048092:CDS | 45.0% |
| !!! | CCGGTTTGGTTTTAGTGAAC+CGG | - | chr4.4:81738331-81738350 | None:intergenic | 45.0% |
| !!! | GGCGGAGTTGGTTTTTTATG+GGG | - | chr4.4:81738382-81738401 | None:intergenic | 45.0% |
| !!! | GGGCGGAGTTGGTTTTTTAT+GGG | - | chr4.4:81738383-81738402 | None:intergenic | 45.0% |
| !!! | GGTTTTTTATGGGGTCGAAG+AGG | - | chr4.4:81738373-81738392 | None:intergenic | 45.0% |
| !!! | GTGAACCGGCAATGGTTTTT+TGG | - | chr4.4:81738317-81738336 | None:intergenic | 45.0% |
| !!! | TGGTTTTAGTGAACCGGCAA+TGG | - | chr4.4:81738325-81738344 | None:intergenic | 45.0% |
| AAACCGGTGGTGACTTAGAC+GGG | + | chr4.4:81738468-81738487 | MS.gene048092:CDS | 50.0% | |
| AAAGTCTTGGCACAGTGCCT+GGG | - | chr4.4:81739222-81739241 | None:intergenic | 50.0% | |
| AAGGTGGAGGATCCGATGTA+TGG | + | chr4.4:81739591-81739610 | MS.gene048092:CDS | 50.0% | |
| AATACGGATATTGCGGCGCA+TGG | + | chr4.4:81738968-81738987 | MS.gene048092:CDS | 50.0% | |
| ACCATGAACCGTAACCCAAC+CGG | - | chr4.4:81739193-81739212 | None:intergenic | 50.0% | |
| AGTGTGCCTTTGCCAGTTGT+GGG | + | chr4.4:81739460-81739479 | MS.gene048092:CDS | 50.0% | |
| ATACGGATATTGCGGCGCAT+GGG | + | chr4.4:81738969-81738988 | MS.gene048092:CDS | 50.0% | |
| ATGACCCGGTTGAATCACAC+GGG | - | chr4.4:81738517-81738536 | None:intergenic | 50.0% | |
| ATTCAACCGGGTCATGCGAT+TGG | + | chr4.4:81738522-81738541 | MS.gene048092:CDS | 50.0% | |
| CAAACCGGTGGTGACTTAGA+CGG | + | chr4.4:81738467-81738486 | MS.gene048092:CDS | 50.0% | |
| CATGACCCGGTTGAATCACA+CGG | - | chr4.4:81738518-81738537 | None:intergenic | 50.0% | |
| GAGCTTCTAGTCCAAAACGC+AGG | + | chr4.4:81738203-81738222 | MS.gene048092:CDS | 50.0% | |
| GTCATCATCATCGGTGGAAG+AGG | + | chr4.4:81738617-81738636 | MS.gene048092:CDS | 50.0% | |
| GTTTGTGGCGGTGCTCAATA+CGG | + | chr4.4:81738929-81738948 | MS.gene048092:CDS | 50.0% | |
| TAAAGTCTTGGCACAGTGCC+TGG | - | chr4.4:81739223-81739242 | None:intergenic | 50.0% | |
| TAACCAAGGTGTGCCAAGTG+TGG | + | chr4.4:81739666-81739685 | MS.gene048092:CDS | 50.0% | |
| TCAACCCGTGTGATTCAACC+GGG | + | chr4.4:81738510-81738529 | MS.gene048092:CDS | 50.0% | |
| TCGGGTTTACCCGGAGTTAA+CGG | + | chr4.4:81738826-81738845 | MS.gene048092:CDS | 50.0% | |
| TGTATCCAACGTGCCACACT+TGG | - | chr4.4:81739682-81739701 | None:intergenic | 50.0% | |
| TTCAACCGGGTCATGCGATT+GGG | + | chr4.4:81738523-81738542 | MS.gene048092:CDS | 50.0% | |
| TTGTGGGCGGATATTAGCGA+CGG | + | chr4.4:81738994-81739013 | MS.gene048092:CDS | 50.0% | |
| TTTGGGAGGAGTTTACGGGT+TGG | - | chr4.4:81738299-81738318 | None:intergenic | 50.0% | |
| ! | GGTCAACGATTGGTCAAGCT+TGG | + | chr4.4:81739538-81739557 | MS.gene048092:CDS | 50.0% |
| !! | CGACACCGTTTTTGCGTTTC+GGG | - | chr4.4:81738664-81738683 | None:intergenic | 50.0% |
| !! | CGATGTTGGTTCGGTCTAAG+AGG | - | chr4.4:81738274-81738293 | None:intergenic | 50.0% |
| !! | CGGTGAGGATTTTTAAGGGG+CGG | - | chr4.4:81738400-81738419 | None:intergenic | 50.0% |
| !! | GATGCGGTGGTTGTTGTTTG+TGG | + | chr4.4:81738914-81738933 | MS.gene048092:CDS | 50.0% |
| !! | GGATTTTTAAGGGGCGGAGT+TGG | - | chr4.4:81738394-81738413 | None:intergenic | 50.0% |
| !! | GTGCCTGAAACGGTGTTGTA+TGG | + | chr4.4:81739415-81739434 | MS.gene048092:CDS | 50.0% |
| !! | TTTACGGGTTGGACCGATGT+TGG | - | chr4.4:81738288-81738307 | None:intergenic | 50.0% |
| !!! | ACCGGCAATGGTTTTTTGGG+AGG | - | chr4.4:81738313-81738332 | None:intergenic | 50.0% |
| !!! | CGGTTCATGGTTTTGAACCC+AGG | + | chr4.4:81739202-81739221 | MS.gene048092:CDS | 50.0% |
| !!! | GGGGCGGAGTTGGTTTTTTA+TGG | - | chr4.4:81738384-81738403 | None:intergenic | 50.0% |
| ACCGACACATGGTGCTCTTC+CGG | + | chr4.4:81738416-81738435 | MS.gene048092:CDS | 55.0% | |
| ACCGAGGAATTATCCGTCCG+CGG | + | chr4.4:81738853-81738872 | MS.gene048092:CDS | 55.0% | |
| ACCGGTTGGGTTACGGTTCA+TGG | + | chr4.4:81739189-81739208 | MS.gene048092:CDS | 55.0% | |
| ATCGACCTGGTGAACCGGTT+GGG | + | chr4.4:81739176-81739195 | MS.gene048092:CDS | 55.0% | |
| CGGGTTTACCCGGAGTTAAC+GGG | + | chr4.4:81738827-81738846 | MS.gene048092:CDS | 55.0% | |
| CTCCATTTCCCAAACCGGGT+CGG | - | chr4.4:81739023-81739042 | None:intergenic | 55.0% | |
| CTCTTCCCAATCGCATGACC+CGG | - | chr4.4:81738531-81738550 | None:intergenic | 55.0% | |
| CTGGTGAACCGGTTGGGTTA+CGG | + | chr4.4:81739182-81739201 | MS.gene048092:CDS | 55.0% | |
| GAACCCGTCTAAGTCACCAC+CGG | - | chr4.4:81738474-81738493 | None:intergenic | 55.0% | |
| GAGTGTGCCTTTGCCAGTTG+TGG | + | chr4.4:81739459-81739478 | MS.gene048092:CDS | 55.0% | |
| GGTTCCGTCATCATCATCGG+TGG | + | chr4.4:81738611-81738630 | MS.gene048092:CDS | 55.0% | |
| GTGTGCCTTTGCCAGTTGTG+GGG | + | chr4.4:81739461-81739480 | MS.gene048092:CDS | 55.0% | |
| GTTTACCCGGAGTTAACGGG+TGG | + | chr4.4:81738830-81738849 | MS.gene048092:CDS | 55.0% | |
| TATCGACCTGGTGAACCGGT+TGG | + | chr4.4:81739175-81739194 | MS.gene048092:CDS | 55.0% | |
| TGTGGGCGGATATTAGCGAC+GGG | + | chr4.4:81738995-81739014 | MS.gene048092:CDS | 55.0% | |
| ! | CGATTGGTCAAGCTTGGGGT+TGG | + | chr4.4:81739544-81739563 | MS.gene048092:CDS | 55.0% |
| ! | GGGTTGGACCGATGTTGGTT+CGG | - | chr4.4:81738283-81738302 | None:intergenic | 55.0% |
| ! | TCGATGGTGTTGGAAGGTGG+AGG | + | chr4.4:81739578-81739597 | MS.gene048092:CDS | 55.0% |
| ! | TCGTGTGGTTCGGGTTTACC+CGG | + | chr4.4:81738817-81738836 | MS.gene048092:CDS | 55.0% |
| ! | TGGTCGATGGTGTTGGAAGG+TGG | + | chr4.4:81739575-81739594 | MS.gene048092:CDS | 55.0% |
| !! | AAGAGCACCATGTGTCGGTG+AGG | - | chr4.4:81738415-81738434 | None:intergenic | 55.0% |
| !! | ACCGGAAGAGCACCATGTGT+CGG | - | chr4.4:81738420-81738439 | None:intergenic | 55.0% |
| !! | ATCCGACCCGGTTTGGGAAA+TGG | + | chr4.4:81739018-81739037 | MS.gene048092:CDS | 55.0% |
| !! | GCGGTGGTTGTTGTTTGTGG+CGG | + | chr4.4:81738917-81738936 | MS.gene048092:CDS | 55.0% |
| !!! | AGGGTGGCACGTGCTGATTT+TGG | - | chr4.4:81738170-81738189 | None:intergenic | 55.0% |
| !!! | GGGTGGCACGTGCTGATTTT+GGG | - | chr4.4:81738169-81738188 | None:intergenic | 55.0% |
| ACTAGAAGCTCCCACGTGCC+GGG | - | chr4.4:81738194-81738213 | None:intergenic | 60.0% | |
| ATTAGCGACGGGATCCGACC+CGG | + | chr4.4:81739006-81739025 | MS.gene048092:CDS | 60.0% | |
| ATTGCGGCGCATGGGAGTTG+TGG | + | chr4.4:81738977-81738996 | MS.gene048092:CDS | 60.0% | |
| CCCGCGGACGGATAATTCCT+CGG | - | chr4.4:81738857-81738876 | None:intergenic | 60.0% | |
| CCGAGGAATTATCCGTCCGC+GGG | + | chr4.4:81738854-81738873 | MS.gene048092:CDS | 60.0% | |
| CGAGGAATTATCCGTCCGCG+GGG | + | chr4.4:81738855-81738874 | MS.gene048092:CDS | 60.0% | |
| CTCGGTCCACCCGTTAACTC+CGG | - | chr4.4:81738839-81738858 | None:intergenic | 60.0% | |
| GACTAGAAGCTCCCACGTGC+CGG | - | chr4.4:81738195-81738214 | None:intergenic | 60.0% | |
| GATGTATGGCCCCACCGAGT+GGG | + | chr4.4:81739605-81739624 | MS.gene048092:CDS | 60.0% | |
| GTGCAACCATCCCACTCGGT+GGG | - | chr4.4:81739618-81739637 | None:intergenic | 60.0% | |
| GTGCCACACTTGGCACACCT+TGG | - | chr4.4:81739672-81739691 | None:intergenic | 60.0% | |
| GTGTGCCAAGTGTGGCACGT+TGG | + | chr4.4:81739674-81739693 | MS.gene048092:CDS | 60.0% | |
| TCGGTCCACCCGTTAACTCC+GGG | - | chr4.4:81738838-81738857 | None:intergenic | 60.0% | |
| TCTGCGGTGGTCGATGGTGT+TGG | + | chr4.4:81739568-81739587 | MS.gene048092:CDS | 60.0% | |
| TTATCCGTCCGCGGGGAGTT+CGG | + | chr4.4:81738862-81738881 | MS.gene048092:CDS | 60.0% | |
| TTGCGGCGCATGGGAGTTGT+GGG | + | chr4.4:81738978-81738997 | MS.gene048092:CDS | 60.0% | |
| ! | CACTCGGTGGGGCCATACAT+CGG | - | chr4.4:81739606-81739625 | None:intergenic | 60.0% |
| ! | CGGTGGTCGATGGTGTTGGA+AGG | + | chr4.4:81739572-81739591 | MS.gene048092:CDS | 60.0% |
| ! | CGTAACCCAACCGGTTCACC+AGG | - | chr4.4:81739184-81739203 | None:intergenic | 60.0% |
| ! | GAGTTCGGTGATGCTGGCGT+TGG | + | chr4.4:81738877-81738896 | MS.gene048092:CDS | 60.0% |
| ! | TCGGTGATGCTGGCGTTGGA+AGG | + | chr4.4:81738881-81738900 | MS.gene048092:CDS | 60.0% |
| ! | TGCAACCATCCCACTCGGTG+GGG | - | chr4.4:81739617-81739636 | None:intergenic | 60.0% |
| !! | CAAGCTTGGGGTTGGCTCTG+CGG | + | chr4.4:81739552-81739571 | MS.gene048092:CDS | 60.0% |
| !! | CGACCCGGTTTGGGAAATGG+AGG | + | chr4.4:81739021-81739040 | MS.gene048092:CDS | 60.0% |
| AGTGGGATGGTTGCACCGCC+AGG | + | chr4.4:81739622-81739641 | MS.gene048092:CDS | 65.0% | |
| ATCACCGAACTCCCCGCGGA+CGG | - | chr4.4:81738869-81738888 | None:intergenic | 65.0% | |
| CAGCATCACCGAACTCCCCG+CGG | - | chr4.4:81738873-81738892 | None:intergenic | 65.0% | |
| CGATGTATGGCCCCACCGAG+TGG | + | chr4.4:81739604-81739623 | MS.gene048092:CDS | 65.0% | |
| CTAGAAGCTCCCACGTGCCG+GGG | - | chr4.4:81738193-81738212 | None:intergenic | 65.0% | |
| GACGGGATCCGACCCGGTTT+GGG | + | chr4.4:81739012-81739031 | MS.gene048092:CDS | 65.0% | |
| GGCGGTGCAACCATCCCACT+CGG | - | chr4.4:81739622-81739641 | None:intergenic | 65.0% | |
| GGTGCAACCATCCCACTCGG+TGG | - | chr4.4:81739619-81739638 | None:intergenic | 65.0% | |
| TATGGCCCCACCGAGTGGGA+TGG | + | chr4.4:81739609-81739628 | MS.gene048092:CDS | 65.0% | |
| ! | CGGAGTTAACGGGTGGACCG+AGG | + | chr4.4:81738837-81738856 | MS.gene048092:CDS | 65.0% |
| !! | GTTGGCTCTGCGGTGGTCGA+TGG | + | chr4.4:81739562-81739581 | MS.gene048092:CDS | 65.0% |
| AAGCTCCCACGTGCCGGGGA+GGG | - | chr4.4:81738189-81738208 | None:intergenic | 70.0% | |
| CGACGGGATCCGACCCGGTT+TGG | + | chr4.4:81739011-81739030 | MS.gene048092:CDS | 70.0% | |
| CGGCGCATGGGAGTTGTGGG+CGG | + | chr4.4:81738981-81739000 | MS.gene048092:CDS | 70.0% | |
| TCAGCACGTGCCACCCTCCC+CGG | + | chr4.4:81738173-81738192 | MS.gene048092:CDS | 70.0% | |
| ! | CGCGGGGAGTTCGGTGATGC+TGG | + | chr4.4:81738871-81738890 | MS.gene048092:CDS | 70.0% |
| !! | GCTTGGGGTTGGCTCTGCGG+TGG | + | chr4.4:81739555-81739574 | MS.gene048092:CDS | 70.0% |
| GAAGCTCCCACGTGCCGGGG+AGG | - | chr4.4:81738190-81738209 | None:intergenic | 75.0% | |
| TGCCACCCTCCCCGGCACGT+GGG | + | chr4.4:81738181-81738200 | MS.gene048092:CDS | 75.0% | |
| ! | CTCCCACGTGCCGGGGAGGG+TGG | - | chr4.4:81738186-81738205 | None:intergenic | 80.0% |
| ! | GTGCCACCCTCCCCGGCACG+TGG | + | chr4.4:81738180-81738199 | MS.gene048092:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 81738113 | 81739711 | 81738113 | ID=MS.gene048092 |
| chr4.4 | mRNA | 81738113 | 81739711 | 81738113 | ID=MS.gene048092.t1;Parent=MS.gene048092 |
| chr4.4 | exon | 81738113 | 81739711 | 81738113 | ID=MS.gene048092.t1.exon1;Parent=MS.gene048092.t1 |
| chr4.4 | CDS | 81738113 | 81739711 | 81738113 | ID=cds.MS.gene048092.t1;Parent=MS.gene048092.t1 |
| Gene Sequence |
| Protein sequence |
