Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050599.t1 | XP_003626514.1 | 96.6 | 292 | 10 | 0 | 107 | 398 | 2 | 293 | 5.70E-152 | 547.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050599.t1 | Q8S8M5 | 59.1 | 298 | 110 | 4 | 102 | 398 | 12 | 298 | 6.0e-86 | 319.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050599.t1 | G7L308 | 96.6 | 292 | 10 | 0 | 107 | 398 | 2 | 293 | 4.1e-152 | 547.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050599 | MS.gene22839 | 0.98344 | 9.52E-158 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31641 | MS.gene050599 | PPI |
| MS.gene050599 | MS.gene06902 | PPI |
| MS.gene057119 | MS.gene050599 | PPI |
| MS.gene013576 | MS.gene050599 | PPI |
| MS.gene059163 | MS.gene050599 | PPI |
| MS.gene06693 | MS.gene050599 | PPI |
| MS.gene021449 | MS.gene050599 | PPI |
| MS.gene059164 | MS.gene050599 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050599.t1 | MTR_7g116710 | 96.575 | 292 | 10 | 0 | 107 | 398 | 2 | 293 | 0.0 | 587 |
| MS.gene050599.t1 | MTR_8g028410 | 70.034 | 297 | 88 | 1 | 102 | 398 | 15 | 310 | 1.02e-146 | 419 |
| MS.gene050599.t1 | MTR_8g028410 | 74.390 | 246 | 62 | 1 | 102 | 347 | 15 | 259 | 3.67e-128 | 371 |
| MS.gene050599.t1 | MTR_8g028410 | 77.885 | 208 | 45 | 1 | 102 | 309 | 15 | 221 | 3.71e-114 | 333 |
| MS.gene050599.t1 | MTR_8g028410 | 83.060 | 183 | 31 | 0 | 102 | 284 | 15 | 197 | 7.95e-109 | 318 |
| MS.gene050599.t1 | MTR_1g007880 | 51.515 | 132 | 64 | 0 | 101 | 232 | 12 | 143 | 1.01e-39 | 144 |
| MS.gene050599.t1 | MTR_1g007880 | 51.515 | 132 | 64 | 0 | 101 | 232 | 31 | 162 | 1.97e-39 | 144 |
| MS.gene050599.t1 | MTR_3g091760 | 49.618 | 131 | 66 | 0 | 102 | 232 | 16 | 146 | 4.14e-37 | 135 |
| MS.gene050599.t1 | MTR_3g091760 | 49.618 | 131 | 66 | 0 | 102 | 232 | 16 | 146 | 7.66e-37 | 137 |
| MS.gene050599.t1 | MTR_6g087680 | 39.516 | 124 | 74 | 1 | 107 | 230 | 16 | 138 | 4.75e-24 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050599.t1 | AT2G46225 | 59.396 | 298 | 109 | 4 | 102 | 398 | 12 | 298 | 2.41e-117 | 343 |
| MS.gene050599.t1 | AT2G46225 | 54.103 | 329 | 108 | 5 | 102 | 398 | 12 | 329 | 4.98e-112 | 331 |
| MS.gene050599.t1 | AT2G46225 | 57.383 | 298 | 103 | 5 | 102 | 398 | 12 | 286 | 4.26e-108 | 320 |
| MS.gene050599.t1 | AT3G49290 | 52.672 | 131 | 62 | 0 | 102 | 232 | 7 | 137 | 6.13e-40 | 144 |
| MS.gene050599.t1 | AT3G49290 | 52.672 | 131 | 62 | 0 | 102 | 232 | 7 | 137 | 6.13e-40 | 144 |
| MS.gene050599.t1 | AT5G24310 | 32.993 | 294 | 183 | 7 | 102 | 391 | 13 | 296 | 1.29e-38 | 141 |
| MS.gene050599.t1 | AT5G24310 | 48.872 | 133 | 68 | 0 | 102 | 234 | 7 | 139 | 4.59e-38 | 137 |
| MS.gene050599.t1 | AT5G24310 | 49.242 | 132 | 67 | 0 | 102 | 233 | 7 | 138 | 9.75e-38 | 139 |
| MS.gene050599.t1 | AT5G24310 | 49.242 | 132 | 67 | 0 | 102 | 233 | 13 | 144 | 1.02e-37 | 139 |
| MS.gene050599.t1 | AT5G42030 | 44.203 | 138 | 77 | 0 | 95 | 232 | 7 | 144 | 1.51e-34 | 127 |
| MS.gene050599.t1 | AT5G42030 | 44.203 | 138 | 77 | 0 | 95 | 232 | 7 | 144 | 2.37e-34 | 129 |
| MS.gene050599.t1 | AT5G42030 | 44.203 | 138 | 77 | 0 | 95 | 232 | 7 | 144 | 6.53e-33 | 126 |
| MS.gene050599.t1 | AT5G42030 | 44.578 | 83 | 46 | 0 | 150 | 232 | 15 | 97 | 6.75e-18 | 82.8 |
Find 84 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGGTTGAGGACGATTTC+TGG | 0.223483 | 7.3:+1416628 | None:intergenic |
| CTGTCTGCAGGTTGCATTAG+AGG | 0.260105 | 7.3:-1415212 | MS.gene050599:intron |
| GCCATGGTAGAAATGATTTA+TGG | 0.266807 | 7.3:+1420743 | None:intergenic |
| TTCAGACCATTGACAACATT+TGG | 0.289027 | 7.3:-1415187 | MS.gene050599:CDS |
| GCTAGATTCGATCAATAAAA+AGG | 0.306397 | 7.3:-1416702 | MS.gene050599:intron |
| GAGCTTTGTCTTCGCCCTTC+AGG | 0.315784 | 7.3:-1418376 | MS.gene050599:intron |
| CCTCTTTGTTTGTGTATACT+TGG | 0.350722 | 7.3:+1416891 | None:intergenic |
| AAGAAGATCAGTTAACTTGC+AGG | 0.369447 | 7.3:+1417076 | None:intergenic |
| GTTAATGCTGTTGATCATCT+TGG | 0.373843 | 7.3:-1417107 | MS.gene050599:CDS |
| TCGAACAACCATGTACAAAA+TGG | 0.376203 | 7.3:-1415476 | MS.gene050599:CDS |
| CAAAATGGAGTGCCTACTTC+TGG | 0.376361 | 7.3:-1415461 | MS.gene050599:CDS |
| GTCCTGTGACACCGAGTGTT+TGG | 0.383262 | 7.3:+1415429 | None:intergenic |
| TCCTGTGACACCGAGTGTTT+GGG | 0.410823 | 7.3:+1415430 | None:intergenic |
| TTCTCTCTCCCTTACCATGT+GGG | 0.416781 | 7.3:+1420443 | None:intergenic |
| GTGGAAAACTCCAGTGGTCT+TGG | 0.420567 | 7.3:+1416239 | None:intergenic |
| TTAATGCTGTTGATCATCTT+GGG | 0.424125 | 7.3:-1417106 | MS.gene050599:CDS |
| TTTGCATCAGTCTGTTTGTA+TGG | 0.428398 | 7.3:+1416668 | None:intergenic |
| GAAGATCTCTACTCTAAATC+AGG | 0.431053 | 7.3:-1417018 | MS.gene050599:intron |
| TCAGACCATTGACAACATTT+GGG | 0.437041 | 7.3:-1415186 | MS.gene050599:CDS |
| GACATACGACGAGGTTTCAA+TGG | 0.439764 | 7.3:-1418409 | MS.gene050599:CDS |
| AGAGAAACCGTTGGTGGGGA+TGG | 0.454125 | 7.3:-1420426 | MS.gene050599:CDS |
| GAGTGCCACCCCACATGGTA+AGG | 0.455433 | 7.3:-1420452 | MS.gene050599:CDS |
| AAATTCTCTGCCAAGACCAC+TGG | 0.477014 | 7.3:-1416249 | MS.gene050599:CDS |
| TGGTGGGGATGGTGGACGGA+TGG | 0.480063 | 7.3:-1420415 | MS.gene050599:CDS |
| GGGGTGGCACTCCATTTCTC+AGG | 0.488194 | 7.3:+1420463 | None:intergenic |
| GAGGAACAGATCCTGAGAAA+TGG | 0.489654 | 7.3:-1420474 | MS.gene050599:CDS |
| ACACAAACAAAGAGGGTGTT+CGG | 0.491272 | 7.3:-1416883 | MS.gene050599:CDS |
| TCAACTGTGCGGCACTCCGT+TGG | 0.493723 | 7.3:+1420769 | None:intergenic |
| CAGAATAGAGTTGAGGCCTC+AGG | 0.496323 | 7.3:+1417865 | None:intergenic |
| ACCCAAACACTCGGTGTCAC+AGG | 0.507227 | 7.3:-1415431 | MS.gene050599:CDS |
| TCTTCTTGAGCAGCAAACAT+TGG | 0.515387 | 7.3:-1417060 | MS.gene050599:CDS |
| AGAAATCGTCCTCAACCTTC+AGG | 0.517750 | 7.3:-1416626 | MS.gene050599:intron |
| AAGGACCCAAATGTTGTCAA+TGG | 0.520330 | 7.3:+1415181 | None:intergenic |
| TCAACAACTACAAACCTGTA+AGG | 0.532124 | 7.3:+1416217 | None:intergenic |
| AACACTCGGTGTCACAGGAC+GGG | 0.539319 | 7.3:-1415426 | MS.gene050599:intron |
| AGTAGAGATCTTCAAGTCCA+TGG | 0.540579 | 7.3:+1417028 | None:intergenic |
| AGATGAAGTGAACACGGTTG+AGG | 0.548875 | 7.3:-1420493 | MS.gene050599:CDS |
| GGTGCTGCCACCCAAACACT+CGG | 0.550242 | 7.3:-1415440 | MS.gene050599:CDS |
| ATGTAGTGCTTGTGATGTCT+AGG | 0.552043 | 7.3:+1416836 | None:intergenic |
| TGTTCGGCAACAGCAGCTGT+TGG | 0.553854 | 7.3:-1416867 | MS.gene050599:CDS |
| AGGGAGAGAGAAACCGTTGG+TGG | 0.557576 | 7.3:-1420432 | MS.gene050599:CDS |
| CATTTCTACCATGGCAACAA+TGG | 0.559985 | 7.3:-1420735 | MS.gene050599:intron |
| CCGTTGGTGGGGATGGTGGA+CGG | 0.561633 | 7.3:-1420419 | MS.gene050599:CDS |
| ATGCACATTTCGATTGTCAA+AGG | 0.568129 | 7.3:+1415162 | None:intergenic |
| GAAACCGTTGGTGGGGATGG+TGG | 0.569351 | 7.3:-1420423 | MS.gene050599:CDS |
| TTCAGGAACTTAAGAACCTG+AGG | 0.571860 | 7.3:-1417881 | MS.gene050599:intron |
| AGATCTGCAAAATTGAGAGC+CGG | 0.575017 | 7.3:-1415079 | MS.gene050599:CDS |
| CATAGAAATAGAGATGGAGT+TGG | 0.578860 | 7.3:-1418436 | MS.gene050599:CDS |
| ACATTTCTTTCTGATCACTA+CGG | 0.579231 | 7.3:+1417814 | None:intergenic |
| TCTCTCTCCCTTACCATGTG+GGG | 0.579741 | 7.3:+1420444 | None:intergenic |
| GGAGAGAGAAACCGTTGGTG+GGG | 0.581672 | 7.3:-1420430 | MS.gene050599:CDS |
| CCAAGTATACACAAACAAAG+AGG | 0.582927 | 7.3:-1416891 | MS.gene050599:CDS |
| TTTCTCTCTCCCTTACCATG+TGG | 0.583037 | 7.3:+1420442 | None:intergenic |
| GTCGCCGCTGCAAAGAGATG+TGG | 0.583052 | 7.3:+1420924 | None:intergenic |
| AAATGGAGTGCCACCCCACA+TGG | 0.584823 | 7.3:-1420457 | MS.gene050599:CDS |
| CTCTCCCTTACCATGTGGGG+TGG | 0.585591 | 7.3:+1420447 | None:intergenic |
| ACATGGTTGTTCGATGCTGA+AGG | 0.589188 | 7.3:+1415485 | None:intergenic |
| TTGTGCAAATATTCAGCCAA+CGG | 0.589410 | 7.3:-1420785 | MS.gene050599:CDS |
| AACATTGGATGTTTCAACCA+TGG | 0.594116 | 7.3:-1417045 | MS.gene050599:CDS |
| AGCCACGCACCTGAAGGTTG+AGG | 0.594725 | 7.3:+1416617 | None:intergenic |
| GGGAGAGAGAAACCGTTGGT+GGG | 0.595212 | 7.3:-1420431 | MS.gene050599:CDS |
| CGCTGCAAAGAGATGTGGGA+AGG | 0.595415 | 7.3:+1420929 | None:intergenic |
| CCGTCCACCATCCCCACCAA+CGG | 0.600141 | 7.3:+1420419 | None:intergenic |
| GCCATAAATCATTTCTACCA+TGG | 0.600526 | 7.3:-1420744 | MS.gene050599:CDS |
| TGGGTGGCAGCACCAGAAGT+AGG | 0.602739 | 7.3:+1415449 | None:intergenic |
| AAACACTCGGTGTCACAGGA+CGG | 0.607093 | 7.3:-1415427 | MS.gene050599:CDS |
| CGACGCGGATTTCGATGAAG+TGG | 0.612203 | 7.3:-1420964 | None:intergenic |
| TCGCCGCTGCAAAGAGATGT+GGG | 0.613953 | 7.3:+1420925 | None:intergenic |
| AGTGCCACCCCACATGGTAA+GGG | 0.614803 | 7.3:-1420451 | MS.gene050599:CDS |
| GCATTACATAGAAATAGAGA+TGG | 0.618764 | 7.3:-1418442 | MS.gene050599:CDS |
| ATGAATGACCATTGTTGCCA+TGG | 0.619553 | 7.3:+1420727 | None:intergenic |
| ACAACTACAAACCTGTAAGG+TGG | 0.621109 | 7.3:+1416220 | None:intergenic |
| AGGTATTTATGAGACAGAGC+CGG | 0.627499 | 7.3:+1415060 | None:intergenic |
| CAGATAATGAAGAGATTACA+CGG | 0.636309 | 7.3:-1415514 | MS.gene050599:CDS |
| CAAGTATACACAAACAAAGA+GGG | 0.643568 | 7.3:-1416890 | MS.gene050599:CDS |
| ATGAAGGTGAGGTACCTGAA+GGG | 0.664165 | 7.3:+1418362 | None:intergenic |
| TCTGCAGCAGAATAGAGTTG+AGG | 0.670021 | 7.3:+1417858 | None:intergenic |
| CTTCCCACATCTCTTTGCAG+CGG | 0.671133 | 7.3:-1420928 | MS.gene050599:CDS |
| TGTGACACCGAGTGTTTGGG+TGG | 0.676551 | 7.3:+1415433 | None:intergenic |
| GGTTGAAGATGAAGTGAACA+CGG | 0.687804 | 7.3:-1420499 | MS.gene050599:CDS |
| TGTAAGGTGGAAAACTCCAG+TGG | 0.700267 | 7.3:+1416233 | None:intergenic |
| GTAAGGGAGAGAGAAACCGT+TGG | 0.714207 | 7.3:-1420435 | MS.gene050599:CDS |
| ATTTATGGCAGTCAACTGTG+CGG | 0.736814 | 7.3:+1420758 | None:intergenic |
| GTTGGCAATGACATACGACG+AGG | 0.763516 | 7.3:-1418418 | MS.gene050599:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATTTACTCTATAAA+AGG | + | chr7.3:1419952-1419971 | None:intergenic | 10.0% |
| !! | AATATATTTACTCTATAAAA+GGG | + | chr7.3:1419951-1419970 | None:intergenic | 10.0% |
| !! | ATAAATCATAATAAAATCAA+AGG | + | chr7.3:1415361-1415380 | None:intergenic | 10.0% |
| !! | TTACGATATATATTTAATAA+TGG | + | chr7.3:1416124-1416143 | None:intergenic | 10.0% |
| !!! | AATGAAATATTTTAACATTA+AGG | + | chr7.3:1416854-1416873 | None:intergenic | 10.0% |
| !!! | CTTTATATAGTAAATTTTTA+TGG | - | chr7.3:1416449-1416468 | MS.gene050599:CDS | 10.0% |
| !!! | TTTGATTTTATTATGATTTA+TGG | - | chr7.3:1415360-1415379 | MS.gene050599:intron | 10.0% |
| !! | AAAAATCAAATCAAAAATCT+TGG | + | chr7.3:1415457-1415476 | None:intergenic | 15.0% |
| !! | GAAGCAAAAATATTAAATTT+GGG | - | chr7.3:1415385-1415404 | MS.gene050599:intron | 15.0% |
| !!! | AATTAAATTTTGAATCTTGT+TGG | - | chr7.3:1417795-1417814 | MS.gene050599:intron | 15.0% |
| !!! | ACTTTGTTTATTTATTCTAA+AGG | + | chr7.3:1417294-1417313 | None:intergenic | 15.0% |
| !!! | ATGTATATTTTTATGCTTTT+AGG | - | chr7.3:1418427-1418446 | MS.gene050599:CDS | 15.0% |
| !!! | ATTTGAGTTAGAATAAAAAT+AGG | + | chr7.3:1417707-1417726 | None:intergenic | 15.0% |
| !!! | ATTTTTAACCAAGAAAAAAA+GGG | + | chr7.3:1415132-1415151 | None:intergenic | 15.0% |
| !!! | GATATATATTTAATAATGGA+GGG | + | chr7.3:1416120-1416139 | None:intergenic | 15.0% |
| !!! | TGGTTAAAAATGTATAATTT+TGG | - | chr7.3:1415141-1415160 | MS.gene050599:CDS | 15.0% |
| !! | AAAAAAAAGGTTGAAAAAAG+GGG | + | chr7.3:1418284-1418303 | None:intergenic | 20.0% |
| !! | AAAAGTTCGTAATACTTTAT+TGG | - | chr7.3:1416718-1416737 | MS.gene050599:intron | 20.0% |
| !! | AAAGTTCGTAATACTTTATT+GGG | - | chr7.3:1416719-1416738 | MS.gene050599:intron | 20.0% |
| !! | ACAATAAACATGTACTTATA+AGG | + | chr7.3:1416926-1416945 | None:intergenic | 20.0% |
| !! | ATCAAATAATTCAGTTCAAT+TGG | - | chr7.3:1420425-1420444 | MS.gene050599:CDS | 20.0% |
| !! | ATGACAATAAGTAAGTATAT+TGG | + | chr7.3:1416897-1416916 | None:intergenic | 20.0% |
| !! | CAAAAAAAAGGTTGAAAAAA+GGG | + | chr7.3:1418285-1418304 | None:intergenic | 20.0% |
| !! | CGATATATATTTAATAATGG+AGG | + | chr7.3:1416121-1416140 | None:intergenic | 20.0% |
| !! | GATTAATCATTACATATTCA+GGG | - | chr7.3:1417077-1417096 | MS.gene050599:CDS | 20.0% |
| !! | GGAAGCAAAAATATTAAATT+TGG | - | chr7.3:1415384-1415403 | MS.gene050599:intron | 20.0% |
| !! | TATCTTAAAGAATAACTCAT+GGG | + | chr7.3:1415415-1415434 | None:intergenic | 20.0% |
| !! | TCAAATAATTCAGTTCAATT+GGG | - | chr7.3:1420426-1420445 | MS.gene050599:CDS | 20.0% |
| !! | TGATTAATCATTACATATTC+AGG | - | chr7.3:1417076-1417095 | MS.gene050599:CDS | 20.0% |
| !! | TTCTTAAAATATTGTCTCAA+TGG | - | chr7.3:1418679-1418698 | MS.gene050599:intron | 20.0% |
| !! | TTGATTATTTCCCAAAAAAA+AGG | + | chr7.3:1418297-1418316 | None:intergenic | 20.0% |
| !!! | AAAAGCAAGTTTTTAATTTG+AGG | - | chr7.3:1419621-1419640 | MS.gene050599:intron | 20.0% |
| !!! | AACTAAGCTATTCTTTTTAT+AGG | + | chr7.3:1420473-1420492 | None:intergenic | 20.0% |
| !!! | ACAATAACTCTTTTCATATA+TGG | + | chr7.3:1416958-1416977 | None:intergenic | 20.0% |
| !!! | ACTAAGCTATTCTTTTTATA+GGG | + | chr7.3:1420472-1420491 | None:intergenic | 20.0% |
| !!! | AGACTTTACTTATCTTTTTA+CGG | - | chr7.3:1417859-1417878 | MS.gene050599:CDS | 20.0% |
| !!! | ATTTTTACACAATTATCACA+AGG | + | chr7.3:1416646-1416665 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTAACCATGAGAT+TGG | + | chr7.3:1415780-1415799 | None:intergenic | 20.0% |
| !!! | CATTTTTAACCAAGAAAAAA+AGG | + | chr7.3:1415133-1415152 | None:intergenic | 20.0% |
| !!! | CTTTTTTCAACCTTTTTTTT+GGG | - | chr7.3:1418284-1418303 | MS.gene050599:intron | 20.0% |
| !!! | GATTTTATTATGATTTATGG+AGG | - | chr7.3:1415363-1415382 | MS.gene050599:intron | 20.0% |
| !!! | TCATTTTAGATTTACGATAA+GGG | - | chr7.3:1416389-1416408 | MS.gene050599:intron | 20.0% |
| !!! | TTAAGAAGTATGTTTTTACT+GGG | - | chr7.3:1415479-1415498 | MS.gene050599:CDS | 20.0% |
| !!! | TTCATTTTAGATTTACGATA+AGG | - | chr7.3:1416388-1416407 | MS.gene050599:intron | 20.0% |
| !!! | TTGACTATTTTATTAAAGCA+TGG | + | chr7.3:1420651-1420670 | None:intergenic | 20.0% |
| !!! | TTTAAGAAGTATGTTTTTAC+TGG | - | chr7.3:1415478-1415497 | MS.gene050599:CDS | 20.0% |
| !!! | TTTTAGTTTGTTGTTTTAGA+AGG | - | chr7.3:1418249-1418268 | MS.gene050599:intron | 20.0% |
| !!! | TTTTTACACAATTATCACAA+GGG | + | chr7.3:1416645-1416664 | None:intergenic | 20.0% |
| ! | AAATGTTAATGAATGCCTTA+AGG | - | chr7.3:1416412-1416431 | MS.gene050599:intron | 25.0% |
| ! | AAGCACTAAAAAAGAAGAAA+TGG | + | chr7.3:1420745-1420764 | None:intergenic | 25.0% |
| ! | AAGTCAAATGCTTGATTAAT+TGG | + | chr7.3:1417732-1417751 | None:intergenic | 25.0% |
| ! | AAGTTCGTAATACTTTATTG+GGG | - | chr7.3:1416720-1416739 | MS.gene050599:intron | 25.0% |
| ! | AATTTAGCCATAACATTAAC+TGG | + | chr7.3:1418373-1418392 | None:intergenic | 25.0% |
| ! | ACAATAAGTAAGTATATTGG+AGG | + | chr7.3:1416894-1416913 | None:intergenic | 25.0% |
| ! | ACTAACAAAATGCATAATCA+GGG | + | chr7.3:1416822-1416841 | None:intergenic | 25.0% |
| ! | AGAAATGTAAGATGTTTGAT+TGG | - | chr7.3:1418217-1418236 | MS.gene050599:intron | 25.0% |
| ! | AGGTCAAATACACTAATTAT+CGG | + | chr7.3:1418836-1418855 | None:intergenic | 25.0% |
| ! | ATAAAATCAACTGTTTGTAC+TGG | + | chr7.3:1418338-1418357 | None:intergenic | 25.0% |
| ! | ATAAACAATAATGCTGATAC+CGG | + | chr7.3:1418635-1418654 | None:intergenic | 25.0% |
| ! | ATAGGGAAAAAAACAAACAT+TGG | + | chr7.3:1420455-1420474 | None:intergenic | 25.0% |
| ! | ATTCAAATACAGTCAAAAGA+GGG | - | chr7.3:1415310-1415329 | MS.gene050599:intron | 25.0% |
| ! | CAATTATTATGAGATGAGTT+GGG | + | chr7.3:1418015-1418034 | None:intergenic | 25.0% |
| ! | CCAAAAAAAAGGTTGAAAAA+AGG | + | chr7.3:1418286-1418305 | None:intergenic | 25.0% |
| ! | CCAAAACAAATATATACAAG+CGG | + | chr7.3:1420361-1420380 | None:intergenic | 25.0% |
| ! | GTATCTTAAAGAATAACTCA+TGG | + | chr7.3:1415416-1415435 | None:intergenic | 25.0% |
| ! | TAAAAGATAGATCTGAATGA+AGG | + | chr7.3:1417673-1417692 | None:intergenic | 25.0% |
| ! | TAACAACAACAAATGTTAGT+TGG | + | chr7.3:1418579-1418598 | None:intergenic | 25.0% |
| ! | TAATAGAAATACCTAAAGAG+TGG | + | chr7.3:1418407-1418426 | None:intergenic | 25.0% |
| ! | TCAATTATTATGAGATGAGT+TGG | + | chr7.3:1418016-1418035 | None:intergenic | 25.0% |
| !! | AAAAAAAATTTTCCCATGGT+GGG | - | chr7.3:1415791-1415810 | MS.gene050599:intron | 25.0% |
| !! | ACGAGTAATACACATTTTAT+AGG | + | chr7.3:1415848-1415867 | None:intergenic | 25.0% |
| !! | AGTAATACACATTTTATAGG+TGG | + | chr7.3:1415845-1415864 | None:intergenic | 25.0% |
| !! | GGTTAAAAAAAATTTTCCCA+TGG | - | chr7.3:1415787-1415806 | MS.gene050599:intron | 25.0% |
| !! | GTATTCTAATGATCAACTTT+TGG | - | chr7.3:1420190-1420209 | MS.gene050599:intron | 25.0% |
| !! | TAAAAAAAATTTTCCCATGG+TGG | - | chr7.3:1415790-1415809 | MS.gene050599:intron | 25.0% |
| !! | TCATCTTTCTCAATTGTTTT+GGG | - | chr7.3:1420319-1420338 | MS.gene050599:intron | 25.0% |
| !! | TTTTTCTCTTTTACCATTGA+TGG | - | chr7.3:1419669-1419688 | MS.gene050599:intron | 25.0% |
| !!! | AAATGTATAATTTTGGTCTG+AGG | - | chr7.3:1415148-1415167 | MS.gene050599:CDS | 25.0% |
| !!! | AGGTTTGTTGTTATTTCTTT+TGG | - | chr7.3:1420122-1420141 | MS.gene050599:intron | 25.0% |
| !!! | CCTTTTTTCAACCTTTTTTT+TGG | - | chr7.3:1418283-1418302 | MS.gene050599:intron | 25.0% |
| !!! | GGTTTGTTGTTATTTCTTTT+GGG | - | chr7.3:1420123-1420142 | MS.gene050599:intron | 25.0% |
| !!! | GTACAAACAGTTGATTTTAT+CGG | - | chr7.3:1418338-1418357 | MS.gene050599:intron | 25.0% |
| !!! | TTGAAATTTTGATACAGTGA+AGG | - | chr7.3:1417046-1417065 | MS.gene050599:CDS | 25.0% |
| !!! | TTGAAGTTTTGATACATTGA+AGG | + | chr7.3:1416793-1416812 | None:intergenic | 25.0% |
| AAAACAAAATTCACAGTCTG+TGG | + | chr7.3:1419257-1419276 | None:intergenic | 30.0% | |
| AAATTTGAACAGTCTGAAAG+TGG | - | chr7.3:1418540-1418559 | MS.gene050599:intron | 30.0% | |
| AACACAATCAACAAATACCA+AGG | + | chr7.3:1419835-1419854 | None:intergenic | 30.0% | |
| AACTAGTCACACAAATTTCA+AGG | + | chr7.3:1418764-1418783 | None:intergenic | 30.0% | |
| AACTCGAAATGATGAAAAGA+TGG | + | chr7.3:1420001-1420020 | None:intergenic | 30.0% | |
| ACATTTCTTTCTGATCACTA+CGG | + | chr7.3:1418205-1418224 | None:intergenic | 30.0% | |
| ATCCAAAACAAAACAAAGTG+AGG | - | chr7.3:1417167-1417186 | MS.gene050599:intron | 30.0% | |
| ATTAAGAGTCAAGACTTCTT+TGG | - | chr7.3:1420166-1420185 | MS.gene050599:intron | 30.0% | |
| CAAGTATACACAAACAAAGA+GGG | - | chr7.3:1419126-1419145 | MS.gene050599:intron | 30.0% | |
| CAGATAATGAAGAGATTACA+CGG | - | chr7.3:1420502-1420521 | MS.gene050599:CDS | 30.0% | |
| CATTCAAATACAGTCAAAAG+AGG | - | chr7.3:1415309-1415328 | MS.gene050599:intron | 30.0% | |
| CTAAGTCGACCTTAAAAAAA+CGG | - | chr7.3:1419582-1419601 | MS.gene050599:intron | 30.0% | |
| GAATGTGTATTGTTGTACTT+AGG | - | chr7.3:1419515-1419534 | MS.gene050599:intron | 30.0% | |
| GACTAACAAAATGCATAATC+AGG | + | chr7.3:1416823-1416842 | None:intergenic | 30.0% | |
| GACTACTCATTACAATTTCA+GGG | + | chr7.3:1416762-1416781 | None:intergenic | 30.0% | |
| GAGGAAACTAAATCATATCA+AGG | + | chr7.3:1419883-1419902 | None:intergenic | 30.0% | |
| GCATTACATAGAAATAGAGA+TGG | - | chr7.3:1417574-1417593 | MS.gene050599:intron | 30.0% | |
| GCTAGATTCGATCAATAAAA+AGG | - | chr7.3:1419314-1419333 | MS.gene050599:intron | 30.0% | |
| GGTTTCATTTGAAAAGTTTG+TGG | - | chr7.3:1418073-1418092 | MS.gene050599:intron | 30.0% | |
| GTCCTTAAAGAATATCCTTA+AGG | + | chr7.3:1416430-1416449 | None:intergenic | 30.0% | |
| TATACAAGCGGTGAATAAAA+CGG | + | chr7.3:1420349-1420368 | None:intergenic | 30.0% | |
| TGACTACTCATTACAATTTC+AGG | + | chr7.3:1416763-1416782 | None:intergenic | 30.0% | |
| TGCAAACAATTGCGAAAAAT+GGG | + | chr7.3:1420690-1420709 | None:intergenic | 30.0% | |
| TGCAACAATAATACCATCAA+TGG | + | chr7.3:1419685-1419704 | None:intergenic | 30.0% | |
| TGCATGCTTCAAATAAAGTA+GGG | + | chr7.3:1417120-1417139 | None:intergenic | 30.0% | |
| TGCCTTAAGGATATTCTTTA+AGG | - | chr7.3:1416425-1416444 | MS.gene050599:CDS | 30.0% | |
| TTAATGCTGTTGATCATCTT+GGG | - | chr7.3:1418910-1418929 | MS.gene050599:intron | 30.0% | |
| TTCAAATACAGTCAAAAGAG+GGG | - | chr7.3:1415311-1415330 | MS.gene050599:intron | 30.0% | |
| TTGTTGAATAATTGTGTCCT+TGG | - | chr7.3:1419815-1419834 | MS.gene050599:intron | 30.0% | |
| ! | AAATGTTAGTTGGTGTTCTT+CGG | + | chr7.3:1418569-1418588 | None:intergenic | 30.0% |
| ! | ACGAACTTTTATACACATAC+TGG | + | chr7.3:1416708-1416727 | None:intergenic | 30.0% |
| ! | ATCAAGCATTTGACTTTAAG+TGG | - | chr7.3:1417736-1417755 | MS.gene050599:intron | 30.0% |
| ! | ATGAAAGAGTTTTTGCAACA+GGG | + | chr7.3:1419544-1419563 | None:intergenic | 30.0% |
| ! | CCGCTTGTATATATTTGTTT+TGG | - | chr7.3:1420358-1420377 | MS.gene050599:intron | 30.0% |
| ! | GTCATCTTTCTCAATTGTTT+TGG | - | chr7.3:1420318-1420337 | MS.gene050599:intron | 30.0% |
| ! | TTTCTTTTGTACCACTCTTT+AGG | - | chr7.3:1418393-1418412 | MS.gene050599:CDS | 30.0% |
| ! | TTTTAACCATGAGATTGGAA+GGG | + | chr7.3:1415775-1415794 | None:intergenic | 30.0% |
| ! | TTTTTAACCATGAGATTGGA+AGG | + | chr7.3:1415776-1415795 | None:intergenic | 30.0% |
| !! | ATCTTTTCATCATTTCGAGT+TGG | - | chr7.3:1420000-1420019 | MS.gene050599:intron | 30.0% |
| !! | ATGTTTTTACTGGGTTGTTA+TGG | - | chr7.3:1415488-1415507 | MS.gene050599:CDS | 30.0% |
| !! | CATCTTTCTCAATTGTTTTG+GGG | - | chr7.3:1420320-1420339 | MS.gene050599:intron | 30.0% |
| !! | GGTTTTCACTTCTTTGATTT+CGG | - | chr7.3:1420051-1420070 | MS.gene050599:intron | 30.0% |
| !! | GTTTTCACTTCTTTGATTTC+GGG | - | chr7.3:1420052-1420071 | MS.gene050599:intron | 30.0% |
| !! | TTTTCACTTCTTTGATTTCG+GGG | - | chr7.3:1420053-1420072 | MS.gene050599:intron | 30.0% |
| !!! | ATGTGAACTCCGTTTTTTTA+AGG | + | chr7.3:1419594-1419613 | None:intergenic | 30.0% |
| !!! | TAGTTATTTTGACAGCTTGT+GGG | - | chr7.3:1418779-1418798 | MS.gene050599:intron | 30.0% |
| AAACAAAACAAAGTGAGGAG+AGG | - | chr7.3:1417172-1417191 | MS.gene050599:intron | 35.0% | |
| AAACATAGTGTCCAATCTCA+CGG | - | chr7.3:1416019-1416038 | MS.gene050599:intron | 35.0% | |
| AACATTGGATGTTTCAACCA+TGG | - | chr7.3:1418971-1418990 | MS.gene050599:intron | 35.0% | |
| AAGGGAATCCAAGAATCTTA+TGG | + | chr7.3:1419933-1419952 | None:intergenic | 35.0% | |
| ACTAACAGAATGCACAATCA+GGG | - | chr7.3:1417017-1417036 | MS.gene050599:intron | 35.0% | |
| AGGAAGAGAATTTGCAGATT+GGG | - | chr7.3:1415168-1415187 | MS.gene050599:CDS | 35.0% | |
| AGGTAGCTAAATCACATTGA+CGG | + | chr7.3:1420280-1420299 | None:intergenic | 35.0% | |
| ATGCACATTTCGATTGTCAA+AGG | + | chr7.3:1420857-1420876 | None:intergenic | 35.0% | |
| ATTAGTGTATTTGACCTGCA+TGG | - | chr7.3:1418839-1418858 | MS.gene050599:intron | 35.0% | |
| CACTTTGCCAGTTAATGTTA+TGG | - | chr7.3:1418363-1418382 | MS.gene050599:intron | 35.0% | |
| CATAGAAATAGAGATGGAGT+TGG | - | chr7.3:1417580-1417599 | MS.gene050599:intron | 35.0% | |
| CATGACATTCTTTACTTCCT+TGG | + | chr7.3:1415993-1416012 | None:intergenic | 35.0% | |
| CATGTAAACTGTAGTTTGAG+GGG | - | chr7.3:1420213-1420232 | MS.gene050599:intron | 35.0% | |
| CCAAGTATACACAAACAAAG+AGG | - | chr7.3:1419125-1419144 | MS.gene050599:intron | 35.0% | |
| CTCTCAATCCATAAGATTCT+TGG | - | chr7.3:1419922-1419941 | MS.gene050599:intron | 35.0% | |
| CTGCATGCTTCAAATAAAGT+AGG | + | chr7.3:1417121-1417140 | None:intergenic | 35.0% | |
| CTGTTGCAAAAACTCTTTCA+TGG | - | chr7.3:1419543-1419562 | MS.gene050599:intron | 35.0% | |
| GAAATCAGTAATAAGTGCTC+AGG | + | chr7.3:1418613-1418632 | None:intergenic | 35.0% | |
| GAAGATCTCTACTCTAAATC+AGG | - | chr7.3:1418998-1419017 | MS.gene050599:intron | 35.0% | |
| GAGTTATTGTGAACATTGAG+AGG | - | chr7.3:1416968-1416987 | MS.gene050599:intron | 35.0% | |
| GCAAGAAGAAGAATAAGTAG+AGG | - | chr7.3:1417226-1417245 | MS.gene050599:intron | 35.0% | |
| GCATGTAAACTGTAGTTTGA+GGG | - | chr7.3:1420212-1420231 | MS.gene050599:intron | 35.0% | |
| GCCATAAATCATTTCTACCA+TGG | - | chr7.3:1415272-1415291 | MS.gene050599:intron | 35.0% | |
| GCCATGGTAGAAATGATTTA+TGG | + | chr7.3:1415276-1415295 | None:intergenic | 35.0% | |
| GGAGAAAAGTTATAGCAGTT+AGG | + | chr7.3:1419219-1419238 | None:intergenic | 35.0% | |
| GTAATCTCTTCATTATCTGC+AGG | + | chr7.3:1420501-1420520 | None:intergenic | 35.0% | |
| GTGCAAACAATTGCGAAAAA+TGG | + | chr7.3:1420691-1420710 | None:intergenic | 35.0% | |
| GTTAATGCTGTTGATCATCT+TGG | - | chr7.3:1418909-1418928 | MS.gene050599:intron | 35.0% | |
| TATTGGGGTAATAGTCACTT+TGG | - | chr7.3:1416735-1416754 | MS.gene050599:intron | 35.0% | |
| TCAACAACTACAAACCTGTA+AGG | + | chr7.3:1419802-1419821 | None:intergenic | 35.0% | |
| TCAGACCATTGACAACATTT+GGG | - | chr7.3:1420830-1420849 | MS.gene050599:intron | 35.0% | |
| TCCTGAAAAGACATAACACA+AGG | + | chr7.3:1418122-1418141 | None:intergenic | 35.0% | |
| TCGAACAACCATGTACAAAA+TGG | - | chr7.3:1420540-1420559 | MS.gene050599:intron | 35.0% | |
| TGTACTTGTACGTGTACTTT+GGG | + | chr7.3:1415939-1415958 | None:intergenic | 35.0% | |
| TGTTAACCTCATGTTCTTGA+GGG | - | chr7.3:1417894-1417913 | MS.gene050599:intron | 35.0% | |
| TTCAGACCATTGACAACATT+TGG | - | chr7.3:1420829-1420848 | MS.gene050599:intron | 35.0% | |
| TTGTACTTGTACGTGTACTT+TGG | + | chr7.3:1415940-1415959 | None:intergenic | 35.0% | |
| TTGTGCAAATATTCAGCCAA+CGG | - | chr7.3:1415231-1415250 | MS.gene050599:intron | 35.0% | |
| TTGTTAACCTCATGTTCTTG+AGG | - | chr7.3:1417893-1417912 | MS.gene050599:intron | 35.0% | |
| ! | AAGTCTGTCGGTTACAAAAA+TGG | - | chr7.3:1416062-1416081 | MS.gene050599:intron | 35.0% |
| ! | ATTTAGTTTCCTCAGACAGT+GGG | - | chr7.3:1419890-1419909 | MS.gene050599:intron | 35.0% |
| ! | CAAGAATCTTATGGATTGAG+AGG | + | chr7.3:1419924-1419943 | None:intergenic | 35.0% |
| ! | CATGAAAGAGTTTTTGCAAC+AGG | + | chr7.3:1419545-1419564 | None:intergenic | 35.0% |
| ! | CCTCTTTGTTTGTGTATACT+TGG | + | chr7.3:1419128-1419147 | None:intergenic | 35.0% |
| ! | CTACTTTATTTGAAGCATGC+AGG | - | chr7.3:1417119-1417138 | MS.gene050599:CDS | 35.0% |
| ! | CTGTGGTGTCAATATACTTA+TGG | + | chr7.3:1419240-1419259 | None:intergenic | 35.0% |
| ! | TCCTTGTGTTATGTCTTTTC+AGG | - | chr7.3:1418118-1418137 | MS.gene050599:intron | 35.0% |
| ! | TGAAAGAGTTTTTGCAACAG+GGG | + | chr7.3:1419543-1419562 | None:intergenic | 35.0% |
| ! | TTATTGATGATTCTGTCTGC+AGG | - | chr7.3:1420792-1420811 | MS.gene050599:CDS | 35.0% |
| ! | TTGACGGATGAAAGAAAACA+AGG | + | chr7.3:1420264-1420283 | None:intergenic | 35.0% |
| !! | AAGAAGATCAGTTAACTTGC+AGG | + | chr7.3:1418943-1418962 | None:intergenic | 35.0% |
| !! | AGAGTGGACTAAACATATTG+AGG | - | chr7.3:1420102-1420121 | MS.gene050599:intron | 35.0% |
| !! | GAGCACTTATTACTGATTTC+CGG | - | chr7.3:1418613-1418632 | MS.gene050599:intron | 35.0% |
| !!! | CTAGTTATTTTGACAGCTTG+TGG | - | chr7.3:1418778-1418797 | MS.gene050599:intron | 35.0% |
| !!! | CTCCTCACTTTGTTTTGTTT+TGG | + | chr7.3:1417172-1417191 | None:intergenic | 35.0% |
| !!! | CTTTGTTAGTTTTGCAAGAG+TGG | - | chr7.3:1420086-1420105 | MS.gene050599:intron | 35.0% |
| !!! | TTTTAATTTGAGGCTGCACA+TGG | - | chr7.3:1419631-1419650 | MS.gene050599:intron | 35.0% |
| AAAACTAACCTTGCTGCAGT+TGG | - | chr7.3:1420030-1420049 | MS.gene050599:intron | 40.0% | |
| AAGAACACTGAAATCCATGC+AGG | + | chr7.3:1418856-1418875 | None:intergenic | 40.0% | |
| AAGGACCCAAATGTTGTCAA+TGG | + | chr7.3:1420838-1420857 | None:intergenic | 40.0% | |
| ACAACTACAAACCTGTAAGG+TGG | + | chr7.3:1419799-1419818 | None:intergenic | 40.0% | |
| ACATCTGCGAATCTAGTCTA+AGG | + | chr7.3:1420300-1420319 | None:intergenic | 40.0% | |
| AGATCTGCAAAATTGAGAGC+CGG | - | chr7.3:1420937-1420956 | MS.gene050599:CDS | 40.0% | |
| AGCTTCCATGAATCACCAAA+GGG | + | chr7.3:1415881-1415900 | None:intergenic | 40.0% | |
| AGGAAGCTTTGCGAAATTGT+AGG | - | chr7.3:1415204-1415223 | MS.gene050599:CDS | 40.0% | |
| AGTAGAGATCTTCAAGTCCA+TGG | + | chr7.3:1418991-1419010 | None:intergenic | 40.0% | |
| ATGAATGACCATTGTTGCCA+TGG | + | chr7.3:1415292-1415311 | None:intergenic | 40.0% | |
| ATGTAGTGCTTGTGATGTCT+AGG | + | chr7.3:1419183-1419202 | None:intergenic | 40.0% | |
| ATTTATGGCAGTCAACTGTG+CGG | + | chr7.3:1415261-1415280 | None:intergenic | 40.0% | |
| CATAAGACAAAACCTCACCA+AGG | - | chr7.3:1415973-1415992 | MS.gene050599:intron | 40.0% | |
| CATTCTTTACTTCCTTGGTG+AGG | + | chr7.3:1415988-1416007 | None:intergenic | 40.0% | |
| CATTTCTACCATGGCAACAA+TGG | - | chr7.3:1415281-1415300 | MS.gene050599:intron | 40.0% | |
| CTCAATGGTGAAGCGTAAAA+TGG | - | chr7.3:1418694-1418713 | MS.gene050599:intron | 40.0% | |
| GAAAAAAAGGGCTCAGAAGA+AGG | + | chr7.3:1415120-1415139 | None:intergenic | 40.0% | |
| GAAGCGTAAAATGGATGTTG+TGG | - | chr7.3:1418703-1418722 | MS.gene050599:intron | 40.0% | |
| GACTAACAGAATGCACAATC+AGG | - | chr7.3:1417016-1417035 | MS.gene050599:intron | 40.0% | |
| GAGGAAGAGAATTTGCAGAT+TGG | - | chr7.3:1415167-1415186 | MS.gene050599:CDS | 40.0% | |
| GATAGATCTGAATGAAGGTG+AGG | + | chr7.3:1417668-1417687 | None:intergenic | 40.0% | |
| GATTGGGTTTACTCTGTACA+AGG | - | chr7.3:1415184-1415203 | MS.gene050599:CDS | 40.0% | |
| GGAAGCTTTGCGAAATTGTA+GGG | - | chr7.3:1415205-1415224 | MS.gene050599:CDS | 40.0% | |
| GGCATGTAAACTGTAGTTTG+AGG | - | chr7.3:1420211-1420230 | MS.gene050599:intron | 40.0% | |
| GGCATGTCGTCATACTTAAA+AGG | - | chr7.3:1418724-1418743 | MS.gene050599:intron | 40.0% | |
| GGGAACACTGATCTTACTAT+AGG | + | chr7.3:1415755-1415774 | None:intergenic | 40.0% | |
| GGTTGAAGATGAAGTGAACA+CGG | - | chr7.3:1415517-1415536 | MS.gene050599:intron | 40.0% | |
| GTACTTGTACGTGTACTTTG+GGG | + | chr7.3:1415938-1415957 | None:intergenic | 40.0% | |
| GTCGAAATTAACCGTGAGAT+TGG | + | chr7.3:1416033-1416052 | None:intergenic | 40.0% | |
| GTCTGCATATACTCAGAGAA+TGG | + | chr7.3:1418051-1418070 | None:intergenic | 40.0% | |
| TCATGGAAGCTGGTTATTGT+GGG | - | chr7.3:1415890-1415909 | MS.gene050599:intron | 40.0% | |
| TCTCACGGTTAATTTCGACT+TGG | - | chr7.3:1416034-1416053 | MS.gene050599:intron | 40.0% | |
| TCTCTGAGTATATGCAGACT+GGG | - | chr7.3:1418052-1418071 | MS.gene050599:intron | 40.0% | |
| TCTTCTTGAGCAGCAAACAT+TGG | - | chr7.3:1418956-1418975 | MS.gene050599:intron | 40.0% | |
| TTATAGCAGTTAGGCCTACT+TGG | + | chr7.3:1419210-1419229 | None:intergenic | 40.0% | |
| TTCAGGAACTTAAGAACCTG+AGG | - | chr7.3:1418135-1418154 | MS.gene050599:intron | 40.0% | |
| TTCATGGAAGCTGGTTATTG+TGG | - | chr7.3:1415889-1415908 | MS.gene050599:intron | 40.0% | |
| TTCCTAGGTGGAACAATTCT+TGG | + | chr7.3:1417977-1417996 | None:intergenic | 40.0% | |
| TTCTCTGAGTATATGCAGAC+TGG | - | chr7.3:1418051-1418070 | MS.gene050599:intron | 40.0% | |
| TTTATAGGTGGCGTTTCACA+TGG | + | chr7.3:1415833-1415852 | None:intergenic | 40.0% | |
| ! | AGCACTACATTTTGCCAAGT+AGG | - | chr7.3:1419193-1419212 | MS.gene050599:intron | 40.0% |
| ! | CGGTGTTAGTTGTATCAATG+CGG | - | chr7.3:1417199-1417218 | MS.gene050599:intron | 40.0% |
| ! | CTTTATTTGAAGCATGCAGG+AGG | - | chr7.3:1417122-1417141 | MS.gene050599:CDS | 40.0% |
| ! | GATTTAGTTTCCTCAGACAG+TGG | - | chr7.3:1419889-1419908 | MS.gene050599:intron | 40.0% |
| ! | TAGGCACTCCATTTTGTACA+TGG | + | chr7.3:1420551-1420570 | None:intergenic | 40.0% |
| ! | TTTAGTTTCCTCAGACAGTG+GGG | - | chr7.3:1419891-1419910 | MS.gene050599:intron | 40.0% |
| !! | AAATTTTCCCATGGTGGGAA+AGG | - | chr7.3:1415796-1415815 | MS.gene050599:intron | 40.0% |
| !! | ACACAAACAAAGAGGGTGTT+CGG | - | chr7.3:1419133-1419152 | MS.gene050599:intron | 40.0% |
| !!! | CTTCTGAGCCCTTTTTTTCT+TGG | - | chr7.3:1415121-1415140 | MS.gene050599:CDS | 40.0% |
| AAATTCTCTGCCAAGACCAC+TGG | - | chr7.3:1419767-1419786 | MS.gene050599:intron | 45.0% | |
| ACAGTCAAAAGAGGGGTTGT+TGG | - | chr7.3:1415318-1415337 | MS.gene050599:intron | 45.0% | |
| ACATGGTTGTTCGATGCTGA+AGG | + | chr7.3:1420534-1420553 | None:intergenic | 45.0% | |
| ACCACTTACCAACAAACCTG+AGG | + | chr7.3:1419475-1419494 | None:intergenic | 45.0% | |
| ACCTCATGTTCTTGAGGGAA+AGG | - | chr7.3:1417899-1417918 | MS.gene050599:intron | 45.0% | |
| ACTGGGTTGTTATGGTTGAG+AGG | - | chr7.3:1415496-1415515 | MS.gene050599:CDS | 45.0% | |
| AGAAATCGTCCTCAACCTTC+AGG | - | chr7.3:1419390-1419409 | MS.gene050599:intron | 45.0% | |
| AGATGAAGTGAACACGGTTG+AGG | - | chr7.3:1415523-1415542 | MS.gene050599:intron | 45.0% | |
| AGTGAAAACCAACTGCAGCA+AGG | + | chr7.3:1420041-1420060 | None:intergenic | 45.0% | |
| AGTGTTCCCTTCCAATCTCA+TGG | - | chr7.3:1415766-1415785 | MS.gene050599:intron | 45.0% | |
| CACTTACCAACAAACCTGAG+GGG | + | chr7.3:1419473-1419492 | None:intergenic | 45.0% | |
| CAGCTTCCATGAATCACCAA+AGG | + | chr7.3:1415882-1415901 | None:intergenic | 45.0% | |
| CCACTTACCAACAAACCTGA+GGG | + | chr7.3:1419474-1419493 | None:intergenic | 45.0% | |
| GACATACGACGAGGTTTCAA+TGG | - | chr7.3:1417607-1417626 | MS.gene050599:intron | 45.0% | |
| GACCGAACTCTGGATTACTA+GGG | + | chr7.3:1417928-1417947 | None:intergenic | 45.0% | |
| GAGGAACAGATCCTGAGAAA+TGG | - | chr7.3:1415542-1415561 | MS.gene050599:intron | 45.0% | |
| GGTAGGGGAGAACATACATT+AGG | + | chr7.3:1419445-1419464 | None:intergenic | 45.0% | |
| GTCGTGAGGTAAGTATAGTC+TGG | - | chr7.3:1417945-1417964 | MS.gene050599:intron | 45.0% | |
| TAGAGACGTCGTGTAGAACT+AGG | - | chr7.3:1419036-1419055 | MS.gene050599:intron | 45.0% | |
| TCCTTTCCCTCAAGAACATG+AGG | + | chr7.3:1417903-1417922 | None:intergenic | 45.0% | |
| TCTGCAGCAGAATAGAGTTG+AGG | + | chr7.3:1418161-1418180 | None:intergenic | 45.0% | |
| TGAAGGTTGAGGACGATTTC+TGG | + | chr7.3:1419391-1419410 | None:intergenic | 45.0% | |
| TGCCCTAGTAATCCAGAGTT+CGG | - | chr7.3:1417923-1417942 | MS.gene050599:intron | 45.0% | |
| TGTAAGGTGGAAAACTCCAG+TGG | + | chr7.3:1419786-1419805 | None:intergenic | 45.0% | |
| TGTTGTTGCAACTTGCAGCA+AGG | + | chr7.3:1417441-1417460 | None:intergenic | 45.0% | |
| TTAGTTTCCTCAGACAGTGG+GGG | - | chr7.3:1419892-1419911 | MS.gene050599:intron | 45.0% | |
| TTCCACCTAGGAATCGAACT+CGG | - | chr7.3:1417984-1418003 | MS.gene050599:intron | 45.0% | |
| TTCTCTCTCCCTTACCATGT+GGG | + | chr7.3:1415576-1415595 | None:intergenic | 45.0% | |
| TTTCTCTCTCCCTTACCATG+TGG | + | chr7.3:1415577-1415596 | None:intergenic | 45.0% | |
| ! | AATGAAGGTGAGGTACCTGA+AGG | + | chr7.3:1417658-1417677 | None:intergenic | 45.0% |
| ! | ACTGGAGTTTTCCACCTTAC+AGG | - | chr7.3:1419785-1419804 | MS.gene050599:intron | 45.0% |
| ! | AGGTAAGTATAGTCTGGCTC+TGG | - | chr7.3:1417951-1417970 | MS.gene050599:intron | 45.0% |
| ! | ATGAAGGTGAGGTACCTGAA+GGG | + | chr7.3:1417657-1417676 | None:intergenic | 45.0% |
| ! | CAAAATGGAGTGCCTACTTC+TGG | - | chr7.3:1420555-1420574 | MS.gene050599:intron | 45.0% |
| ! | CTTTGGTGATTCATGGAAGC+TGG | - | chr7.3:1415880-1415899 | MS.gene050599:intron | 45.0% |
| ! | TTTTGCTGCGACTAGGAACA+TGG | + | chr7.3:1420888-1420907 | None:intergenic | 45.0% |
| !! | CATCCACTTTTGCAGAACCA+AGG | - | chr7.3:1419739-1419758 | MS.gene050599:intron | 45.0% |
| !! | GACTTGGTGAAGAAGTCTGT+CGG | - | chr7.3:1416050-1416069 | MS.gene050599:intron | 45.0% |
| !! | TCAGGTTTGTTGGTAAGTGG+TGG | - | chr7.3:1419474-1419493 | MS.gene050599:intron | 45.0% |
| !!! | TGGCTGTACGGTGGTTTTAA+CGG | - | chr7.3:1415621-1415640 | MS.gene050599:intron | 45.0% |
| ACAAAGTGAGGAGAGGACAG+CGG | - | chr7.3:1417179-1417198 | MS.gene050599:intron | 50.0% | |
| AGAACCCGAGTTCGATTCCT+AGG | + | chr7.3:1417992-1418011 | None:intergenic | 50.0% | |
| AGGGAATCCTTTCCCACCAT+GGG | + | chr7.3:1415806-1415825 | None:intergenic | 50.0% | |
| CAGAATAGAGTTGAGGCCTC+AGG | + | chr7.3:1418154-1418173 | None:intergenic | 50.0% | |
| CGACCGAACTCTGGATTACT+AGG | + | chr7.3:1417929-1417948 | None:intergenic | 50.0% | |
| CTGTCTGCAGGTTGCATTAG+AGG | - | chr7.3:1420804-1420823 | MS.gene050599:intron | 50.0% | |
| CTTCCCACATCTCTTTGCAG+CGG | - | chr7.3:1415088-1415107 | MS.gene050599:CDS | 50.0% | |
| GGCCAAGAATTGTTCCACCT+AGG | - | chr7.3:1417972-1417991 | MS.gene050599:intron | 50.0% | |
| GTAAGGGAGAGAGAAACCGT+TGG | - | chr7.3:1415581-1415600 | MS.gene050599:intron | 50.0% | |
| GTGGAAAACTCCAGTGGTCT+TGG | + | chr7.3:1419780-1419799 | None:intergenic | 50.0% | |
| GTTGGCAATGACATACGACG+AGG | - | chr7.3:1417598-1417617 | MS.gene050599:intron | 50.0% | |
| TAATCCAGAGTTCGGTCGTG+AGG | - | chr7.3:1417931-1417950 | MS.gene050599:intron | 50.0% | |
| TACCAACAAACCTGAGGGGT+GGG | + | chr7.3:1419469-1419488 | None:intergenic | 50.0% | |
| TCCACCTAGGAATCGAACTC+GGG | - | chr7.3:1417985-1418004 | MS.gene050599:intron | 50.0% | |
| TCCTGTGACACCGAGTGTTT+GGG | + | chr7.3:1420589-1420608 | None:intergenic | 50.0% | |
| TCTCTCTCCCTTACCATGTG+GGG | + | chr7.3:1415575-1415594 | None:intergenic | 50.0% | |
| TGAATCACCAAAGGGCGAGA+AGG | + | chr7.3:1415873-1415892 | None:intergenic | 50.0% | |
| TGGCGTTTCACATGGTACCA+GGG | + | chr7.3:1415825-1415844 | None:intergenic | 50.0% | |
| TTACCAACAAACCTGAGGGG+TGG | + | chr7.3:1419470-1419489 | None:intergenic | 50.0% | |
| ! | AGCACACTTTTGCTGCGACT+AGG | + | chr7.3:1420895-1420914 | None:intergenic | 50.0% |
| ! | GGCAGAGAATTTTGCGTCCT+TGG | + | chr7.3:1419759-1419778 | None:intergenic | 50.0% |
| ! | TCTCGCCCTTTGGTGATTCA+TGG | - | chr7.3:1415873-1415892 | MS.gene050599:intron | 50.0% |
| !! | AAACACTCGGTGTCACAGGA+CGG | - | chr7.3:1420589-1420608 | MS.gene050599:intron | 50.0% |
| !! | CCCTCAGGTTTGTTGGTAAG+TGG | - | chr7.3:1419471-1419490 | MS.gene050599:intron | 50.0% |
| !! | CGTCCTTGGTTCTGCAAAAG+TGG | + | chr7.3:1419745-1419764 | None:intergenic | 50.0% |
| !! | TAACGGTGCTGTAGTGTTGC+TGG | - | chr7.3:1415638-1415657 | MS.gene050599:intron | 50.0% |
| ACCAACAAACCTGAGGGGTG+GGG | + | chr7.3:1419468-1419487 | None:intergenic | 55.0% | |
| ACCCGAGTTCGATTCCTAGG+TGG | + | chr7.3:1417989-1418008 | None:intergenic | 55.0% | |
| AGGGAGAGAGAAACCGTTGG+TGG | - | chr7.3:1415584-1415603 | MS.gene050599:intron | 55.0% | |
| AGGGAGAGAGGTGGAGATGA+GGG | - | chr7.3:1415680-1415699 | MS.gene050599:intron | 55.0% | |
| AGTGCCACCCCACATGGTAA+GGG | - | chr7.3:1415565-1415584 | MS.gene050599:intron | 55.0% | |
| CAGGGAATCCTTTCCCACCA+TGG | + | chr7.3:1415807-1415826 | None:intergenic | 55.0% | |
| CGCTGCAAAGAGATGTGGGA+AGG | + | chr7.3:1415090-1415109 | None:intergenic | 55.0% | |
| CTTACCTCACGACCGAACTC+TGG | + | chr7.3:1417938-1417957 | None:intergenic | 55.0% | |
| GGAGAGAGAAACCGTTGGTG+GGG | - | chr7.3:1415586-1415605 | MS.gene050599:intron | 55.0% | |
| GGGAGAGAGAAACCGTTGGT+GGG | - | chr7.3:1415585-1415604 | MS.gene050599:intron | 55.0% | |
| GTCCTGTGACACCGAGTGTT+TGG | + | chr7.3:1420590-1420609 | None:intergenic | 55.0% | |
| GTGGCGTTTCACATGGTACC+AGG | + | chr7.3:1415826-1415845 | None:intergenic | 55.0% | |
| TCGCCGCTGCAAAGAGATGT+GGG | + | chr7.3:1415094-1415113 | None:intergenic | 55.0% | |
| TGTGACACCGAGTGTTTGGG+TGG | + | chr7.3:1420586-1420605 | None:intergenic | 55.0% | |
| TGTTCGGCAACAGCAGCTGT+TGG | - | chr7.3:1419149-1419168 | MS.gene050599:intron | 55.0% | |
| TTGGTGGAGATGAGGGAGAG+AGG | - | chr7.3:1415668-1415687 | MS.gene050599:intron | 55.0% | |
| ! | AAATGGAGTGCCACCCCACA+TGG | - | chr7.3:1415559-1415578 | MS.gene050599:intron | 55.0% |
| ! | AGAGAAACCGTTGGTGGGGA+TGG | - | chr7.3:1415590-1415609 | MS.gene050599:intron | 55.0% |
| ! | CATGGTGGGAAAGGATTCCC+TGG | - | chr7.3:1415805-1415824 | MS.gene050599:intron | 55.0% |
| ! | GAGCTTTGTCTTCGCCCTTC+AGG | - | chr7.3:1417640-1417659 | MS.gene050599:intron | 55.0% |
| ! | GCTGTAGTGTTGCTGGTGGT+GGG | - | chr7.3:1415645-1415664 | MS.gene050599:intron | 55.0% |
| ! | TGCTGTAGTGTTGCTGGTGG+TGG | - | chr7.3:1415644-1415663 | MS.gene050599:intron | 55.0% |
| !! | AACACTCGGTGTCACAGGAC+GGG | - | chr7.3:1420590-1420609 | MS.gene050599:intron | 55.0% |
| !! | ACCCAAACACTCGGTGTCAC+AGG | - | chr7.3:1420585-1420604 | MS.gene050599:intron | 55.0% |
| !! | ATGGTGGACGGATGGCTGTA+CGG | - | chr7.3:1415609-1415628 | MS.gene050599:intron | 55.0% |
| !! | TAGTGTTGCTGGTGGTGGGT+TGG | - | chr7.3:1415649-1415668 | MS.gene050599:intron | 55.0% |
| !! | TGGTGGGTTGGTGGAGATGA+GGG | - | chr7.3:1415661-1415680 | MS.gene050599:intron | 55.0% |
| AGCCACGCACCTGAAGGTTG+AGG | + | chr7.3:1419402-1419421 | None:intergenic | 60.0% | |
| CAACAAACCTGAGGGGTGGG+GGG | + | chr7.3:1419466-1419485 | None:intergenic | 60.0% | |
| CAACCTTCAGGTGCGTGGCT+GGG | - | chr7.3:1419402-1419421 | MS.gene050599:intron | 60.0% | |
| CCAACAAACCTGAGGGGTGG+GGG | + | chr7.3:1419467-1419486 | None:intergenic | 60.0% | |
| CTCGTGACCTTCTCGCCCTT+TGG | - | chr7.3:1415863-1415882 | MS.gene050599:intron | 60.0% | |
| CTCTCCCTTACCATGTGGGG+TGG | + | chr7.3:1415572-1415591 | None:intergenic | 60.0% | |
| GAGGGAGAGAGGTGGAGATG+AGG | - | chr7.3:1415679-1415698 | MS.gene050599:intron | 60.0% | |
| GAGTGCCACCCCACATGGTA+AGG | - | chr7.3:1415564-1415583 | MS.gene050599:intron | 60.0% | |
| GGGGTGGCACTCCATTTCTC+AGG | + | chr7.3:1415556-1415575 | None:intergenic | 60.0% | |
| GTCCTCAACCTTCAGGTGCG+TGG | - | chr7.3:1419397-1419416 | MS.gene050599:intron | 60.0% | |
| GTCGCCGCTGCAAAGAGATG+TGG | + | chr7.3:1415095-1415114 | None:intergenic | 60.0% | |
| GTGGAGATGAGGGAGAGAGG+TGG | - | chr7.3:1415671-1415690 | MS.gene050599:intron | 60.0% | |
| TCAACCTTCAGGTGCGTGGC+TGG | - | chr7.3:1419401-1419420 | MS.gene050599:intron | 60.0% | |
| TCAACTGTGCGGCACTCCGT+TGG | + | chr7.3:1415250-1415269 | None:intergenic | 60.0% | |
| TGGGTGGCAGCACCAGAAGT+AGG | + | chr7.3:1420570-1420589 | None:intergenic | 60.0% | |
| TTTCCCAGCCACGCACCTGA+AGG | + | chr7.3:1419408-1419427 | None:intergenic | 60.0% | |
| ! | GAAACCGTTGGTGGGGATGG+TGG | - | chr7.3:1415593-1415612 | MS.gene050599:intron | 60.0% |
| ! | GGTGCTGCCACCCAAACACT+CGG | - | chr7.3:1420576-1420595 | MS.gene050599:intron | 60.0% |
| !! | CGGTGCTGTAGTGTTGCTGG+TGG | - | chr7.3:1415641-1415660 | MS.gene050599:intron | 60.0% |
| !! | GTGGTGGGTTGGTGGAGATG+AGG | - | chr7.3:1415660-1415679 | MS.gene050599:intron | 60.0% |
| !! | TGTTGCTGGTGGTGGGTTGG+TGG | - | chr7.3:1415652-1415671 | MS.gene050599:intron | 60.0% |
| AAACCTGAGGGGTGGGGGGT+AGG | + | chr7.3:1419462-1419481 | None:intergenic | 65.0% | |
| AACCTGAGGGGTGGGGGGTA+GGG | + | chr7.3:1419461-1419480 | None:intergenic | 65.0% | |
| CCCCCACCCCTCAGGTTTGT+TGG | - | chr7.3:1419464-1419483 | MS.gene050599:intron | 65.0% | |
| CCGTCCACCATCCCCACCAA+CGG | + | chr7.3:1415600-1415619 | None:intergenic | 65.0% | |
| GTCACAGCCCCCACTGTCTG+AGG | + | chr7.3:1419902-1419921 | None:intergenic | 65.0% | |
| GTGGACGGATGGCTGTACGG+TGG | - | chr7.3:1415612-1415631 | MS.gene050599:intron | 65.0% | |
| !! | CCGTTGGTGGGGATGGTGGA+CGG | - | chr7.3:1415597-1415616 | MS.gene050599:intron | 65.0% |
| !! | TGGTGGGGATGGTGGACGGA+TGG | - | chr7.3:1415601-1415620 | MS.gene050599:intron | 65.0% |
| ACCTGAGGGGTGGGGGGTAG+GGG | + | chr7.3:1419460-1419479 | None:intergenic | 70.0% | |
| TCCCCTACCCCCCACCCCTC+AGG | - | chr7.3:1419456-1419475 | MS.gene050599:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 1415066 | 1420972 | 1415066 | ID=MS.gene050599 |
| chr7.3 | mRNA | 1415066 | 1420972 | 1415066 | ID=MS.gene050599.t1;Parent=MS.gene050599 |
| chr7.3 | exon | 1420896 | 1420972 | 1420896 | ID=MS.gene050599.t1.exon1;Parent=MS.gene050599.t1 |
| chr7.3 | CDS | 1420896 | 1420972 | 1420896 | ID=cds.MS.gene050599.t1;Parent=MS.gene050599.t1 |
| chr7.3 | exon | 1420736 | 1420812 | 1420736 | ID=MS.gene050599.t1.exon2;Parent=MS.gene050599.t1 |
| chr7.3 | CDS | 1420736 | 1420812 | 1420736 | ID=cds.MS.gene050599.t1;Parent=MS.gene050599.t1 |
| chr7.3 | exon | 1420413 | 1420522 | 1420413 | ID=MS.gene050599.t1.exon3;Parent=MS.gene050599.t1 |
| chr7.3 | CDS | 1420413 | 1420522 | 1420413 | ID=cds.MS.gene050599.t1;Parent=MS.gene050599.t1 |
| chr7.3 | exon | 1418377 | 1418475 | 1418377 | ID=MS.gene050599.t1.exon4;Parent=MS.gene050599.t1 |
| chr7.3 | CDS | 1418377 | 1418475 | 1418377 | ID=cds.MS.gene050599.t1;Parent=MS.gene050599.t1 |
| chr7.3 | exon | 1417816 | 1417898 | 1417816 | ID=MS.gene050599.t1.exon5;Parent=MS.gene050599.t1 |
| chr7.3 | CDS | 1417816 | 1417898 | 1417816 | ID=cds.MS.gene050599.t1;Parent=MS.gene050599.t1 |
| chr7.3 | exon | 1417019 | 1417169 | 1417019 | ID=MS.gene050599.t1.exon6;Parent=MS.gene050599.t1 |
| chr7.3 | CDS | 1417019 | 1417169 | 1417019 | ID=cds.MS.gene050599.t1;Parent=MS.gene050599.t1 |
| chr7.3 | exon | 1416828 | 1416927 | 1416828 | ID=MS.gene050599.t1.exon7;Parent=MS.gene050599.t1 |
| chr7.3 | CDS | 1416828 | 1416927 | 1416828 | ID=cds.MS.gene050599.t1;Parent=MS.gene050599.t1 |
| chr7.3 | exon | 1416627 | 1416719 | 1416627 | ID=MS.gene050599.t1.exon8;Parent=MS.gene050599.t1 |
| chr7.3 | CDS | 1416627 | 1416719 | 1416627 | ID=cds.MS.gene050599.t1;Parent=MS.gene050599.t1 |
| chr7.3 | exon | 1416414 | 1416501 | 1416414 | ID=MS.gene050599.t1.exon9;Parent=MS.gene050599.t1 |
| chr7.3 | CDS | 1416414 | 1416501 | 1416414 | ID=cds.MS.gene050599.t1;Parent=MS.gene050599.t1 |
| chr7.3 | exon | 1416232 | 1416284 | 1416232 | ID=MS.gene050599.t1.exon10;Parent=MS.gene050599.t1 |
| chr7.3 | CDS | 1416232 | 1416284 | 1416232 | ID=cds.MS.gene050599.t1;Parent=MS.gene050599.t1 |
| chr7.3 | exon | 1415427 | 1415533 | 1415427 | ID=MS.gene050599.t1.exon11;Parent=MS.gene050599.t1 |
| chr7.3 | CDS | 1415427 | 1415533 | 1415427 | ID=cds.MS.gene050599.t1;Parent=MS.gene050599.t1 |
| chr7.3 | exon | 1415066 | 1415224 | 1415066 | ID=MS.gene050599.t1.exon12;Parent=MS.gene050599.t1 |
| chr7.3 | CDS | 1415066 | 1415224 | 1415066 | ID=cds.MS.gene050599.t1;Parent=MS.gene050599.t1 |
| Gene Sequence |
| Protein sequence |
