Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050695.t1 | XP_004494871.1 | 61.5 | 275 | 64 | 8 | 1 | 244 | 1 | 264 | 8.40E-74 | 287 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050695.t1 | P19684 | 32.8 | 174 | 106 | 3 | 71 | 233 | 115 | 288 | 3.1e-16 | 87.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050695.t1 | A0A1S2XWT8 | 61.5 | 275 | 64 | 8 | 1 | 244 | 1 | 264 | 6.1e-74 | 287.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050695 | MS.gene040115 | PPI |
| MS.gene050695 | MS.gene001756 | PPI |
| MS.gene050695 | MS.gene93753 | PPI |
| MS.gene050695 | MS.gene94561 | PPI |
| MS.gene019556 | MS.gene050695 | PPI |
| MS.gene050695 | MS.gene056722 | PPI |
| MS.gene047001 | MS.gene050695 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050695.t1 | MTR_7g118230 | 70.166 | 181 | 29 | 3 | 60 | 240 | 33 | 188 | 3.17e-72 | 224 |
| MS.gene050695.t1 | MTR_1g056520 | 33.133 | 166 | 87 | 3 | 55 | 213 | 101 | 249 | 8.92e-20 | 86.7 |
| MS.gene050695.t1 | MTR_1g045510 | 32.000 | 175 | 100 | 2 | 70 | 235 | 113 | 277 | 1.11e-18 | 83.2 |
| MS.gene050695.t1 | MTR_7g106440 | 30.189 | 159 | 109 | 1 | 57 | 213 | 96 | 254 | 1.50e-18 | 83.2 |
| MS.gene050695.t1 | MTR_3g027140 | 33.333 | 132 | 86 | 1 | 71 | 202 | 61 | 190 | 2.96e-18 | 81.3 |
| MS.gene050695.t1 | MTR_1g097440 | 33.562 | 146 | 84 | 3 | 62 | 207 | 113 | 245 | 1.78e-14 | 72.8 |
| MS.gene050695.t1 | MTR_4g104470 | 41.573 | 89 | 50 | 1 | 60 | 148 | 208 | 294 | 7.88e-14 | 69.7 |
| MS.gene050695.t1 | MTR_4g104470 | 27.222 | 180 | 115 | 3 | 71 | 241 | 123 | 295 | 1.08e-13 | 69.3 |
| MS.gene050695.t1 | MTR_3g075500 | 28.409 | 176 | 109 | 3 | 71 | 235 | 110 | 279 | 3.01e-13 | 68.2 |
| MS.gene050695.t1 | MTR_3g075500 | 37.778 | 90 | 52 | 2 | 55 | 143 | 193 | 279 | 4.87e-12 | 64.7 |
| MS.gene050695.t1 | MTR_3g075500 | 30.556 | 144 | 92 | 2 | 71 | 212 | 110 | 247 | 4.43e-13 | 67.4 |
| MS.gene050695.t1 | MTR_1g064230 | 27.559 | 254 | 138 | 6 | 9 | 233 | 21 | 257 | 2.27e-12 | 65.5 |
| MS.gene050695.t1 | MTR_6g040190 | 31.579 | 133 | 77 | 3 | 72 | 204 | 115 | 233 | 4.29e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050695.t1 | AT1G01080 | 49.231 | 195 | 82 | 4 | 64 | 244 | 102 | 293 | 2.63e-57 | 184 |
| MS.gene050695.t1 | AT1G01080 | 48.980 | 196 | 82 | 5 | 64 | 244 | 102 | 294 | 1.47e-55 | 180 |
| MS.gene050695.t1 | AT1G01080 | 51.497 | 167 | 73 | 3 | 64 | 225 | 102 | 265 | 6.62e-51 | 167 |
| MS.gene050695.t1 | AT3G52150 | 31.667 | 180 | 105 | 4 | 37 | 202 | 33 | 208 | 4.49e-19 | 84.0 |
| MS.gene050695.t1 | AT3G52150 | 31.667 | 180 | 105 | 4 | 37 | 202 | 33 | 208 | 4.49e-19 | 84.0 |
| MS.gene050695.t1 | AT3G52380 | 29.545 | 176 | 118 | 3 | 67 | 240 | 113 | 284 | 1.15e-18 | 84.0 |
| MS.gene050695.t1 | AT1G60000 | 28.253 | 269 | 140 | 10 | 1 | 235 | 1 | 250 | 2.47e-16 | 76.3 |
| MS.gene050695.t1 | AT5G50250 | 30.968 | 155 | 94 | 3 | 59 | 213 | 108 | 249 | 1.98e-15 | 74.3 |
| MS.gene050695.t1 | AT5G50250 | 38.462 | 91 | 54 | 1 | 58 | 148 | 197 | 285 | 5.78e-13 | 67.4 |
| MS.gene050695.t1 | AT2G37220 | 26.857 | 175 | 96 | 2 | 61 | 213 | 82 | 246 | 4.30e-14 | 70.5 |
| MS.gene050695.t1 | AT4G24770 | 32.168 | 143 | 90 | 2 | 71 | 213 | 151 | 286 | 3.72e-13 | 68.2 |
| MS.gene050695.t1 | AT4G24770 | 41.026 | 78 | 46 | 0 | 71 | 148 | 245 | 322 | 8.10e-13 | 67.4 |
| MS.gene050695.t1 | AT4G24770 | 32.168 | 143 | 90 | 2 | 71 | 213 | 151 | 286 | 3.72e-13 | 68.2 |
| MS.gene050695.t1 | AT4G24770 | 41.026 | 78 | 46 | 0 | 71 | 148 | 245 | 322 | 8.10e-13 | 67.4 |
| MS.gene050695.t1 | AT3G16380 | 31.655 | 139 | 85 | 2 | 72 | 210 | 23 | 151 | 5.61e-12 | 65.5 |
| MS.gene050695.t1 | AT1G22760 | 27.907 | 172 | 113 | 3 | 34 | 205 | 103 | 263 | 2.38e-11 | 63.5 |
Find 60 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGACATCTCTTTGGTAAATT+TGG | 0.099306 | 7.4:-429431 | MS.gene050695:CDS |
| AAGAGATGTCTCACGTCTTC+AGG | 0.315903 | 7.4:+429443 | None:intergenic |
| TCTCACCAGTCTCTGCATTT+CGG | 0.377067 | 7.4:+429771 | None:intergenic |
| TGTCGAGTATCACAGCTTCT+AGG | 0.377323 | 7.4:+429914 | None:intergenic |
| CAGAGACTGGTGAGAGTAAA+GGG | 0.393341 | 7.4:-429763 | MS.gene050695:CDS |
| CTCCAAGTAGTGGCTGCTTA+TGG | 0.394918 | 7.4:+430086 | None:intergenic |
| GGTGTTGCAAGATTTGAATC+AGG | 0.395551 | 7.4:-429390 | MS.gene050695:CDS |
| TACCATAAGCAGCCACTACT+TGG | 0.428423 | 7.4:-430088 | MS.gene050695:CDS |
| TGCAGACGTAAACTTGGGTT+GGG | 0.442375 | 7.4:+429942 | None:intergenic |
| TAACGAAGAGGAAGAGAAAG+AGG | 0.445652 | 7.4:+430114 | None:intergenic |
| TTCCCAACATACACCTTATG+AGG | 0.456223 | 7.4:+429485 | None:intergenic |
| GAAGGTTGCAGACGTAAACT+TGG | 0.462333 | 7.4:+429936 | None:intergenic |
| TGTTGGTGGGCGCGAAATGC+GGG | 0.472414 | 7.4:-429588 | MS.gene050695:CDS |
| CTTTGGTAAATTTGGAAATG+TGG | 0.479793 | 7.4:-429423 | MS.gene050695:CDS |
| GCAGAGACTGGTGAGAGTAA+AGG | 0.480321 | 7.4:-429764 | MS.gene050695:CDS |
| GTCCTCATAAGGTGTATGTT+GGG | 0.485859 | 7.4:-429487 | MS.gene050695:CDS |
| TTGCAGACGTAAACTTGGGT+TGG | 0.485972 | 7.4:+429941 | None:intergenic |
| ATACTATGAAGGTCCTCATA+AGG | 0.498833 | 7.4:-429498 | MS.gene050695:CDS |
| GAAGACGTGAGACATCTCTT+TGG | 0.500754 | 7.4:-429440 | MS.gene050695:CDS |
| GGGAGTGCTTATGTCACAAT+GGG | 0.508546 | 7.4:-429743 | MS.gene050695:CDS |
| TCGTTTGAATTGAAGGATGT+TGG | 0.510713 | 7.4:-429605 | MS.gene050695:intron |
| ACAACCACGTAAGTTGAAGC+TGG | 0.512125 | 7.4:-429969 | MS.gene050695:CDS |
| CGCGAGGAGAAAGAAGGATA+AGG | 0.512495 | 7.4:+430025 | None:intergenic |
| AATGCACTTGCTGCATTGGA+TGG | 0.517474 | 7.4:-429701 | MS.gene050695:CDS |
| GGTCCTCATAAGGTGTATGT+TGG | 0.523656 | 7.4:-429488 | MS.gene050695:CDS |
| GAAACACAGAGTAGCAGAGT+TGG | 0.527590 | 7.4:+430138 | None:intergenic |
| GTATATAGTTCTTCTTCTCA+CGG | 0.533646 | 7.4:+429517 | None:intergenic |
| TCTAGTGGTTAGAGAGGGTG+TGG | 0.535491 | 7.4:-429191 | MS.gene050695:CDS |
| AGAAGAACTATATACTATGA+AGG | 0.536527 | 7.4:-429509 | MS.gene050695:CDS |
| ATGTTGGTGGGCGCGAAATG+CGG | 0.539679 | 7.4:-429589 | MS.gene050695:CDS |
| TATATAGTTCTTCTTCTCAC+GGG | 0.541659 | 7.4:+429518 | None:intergenic |
| GTGTTGCAAGATTTGAATCA+GGG | 0.546447 | 7.4:-429389 | MS.gene050695:CDS |
| TCGAACTCTAGTGGTTAGAG+AGG | 0.547494 | 7.4:-429197 | MS.gene050695:CDS |
| CAACCACGTAAGTTGAAGCT+GGG | 0.548485 | 7.4:-429968 | MS.gene050695:CDS |
| AAGCAGCCACTACTTGGAGT+TGG | 0.552480 | 7.4:-430082 | MS.gene050695:CDS |
| GAGGAGTGAAGAGATGAAGT+AGG | 0.557135 | 7.4:+429891 | None:intergenic |
| CTGTGACGCGAGGAGAAAGA+AGG | 0.561006 | 7.4:+430019 | None:intergenic |
| TTTGAATTGAAGGATGTTGG+TGG | 0.563904 | 7.4:-429602 | MS.gene050695:intron |
| GTTTGCCGAAATGCAGAGAC+TGG | 0.571702 | 7.4:-429776 | MS.gene050695:CDS |
| TTGAATTGAAGGATGTTGGT+GGG | 0.579799 | 7.4:-429601 | MS.gene050695:intron |
| GAGTATCCAACTCCAAGTAG+TGG | 0.587862 | 7.4:+430076 | None:intergenic |
| CTTCATCTCTTCACTCCTCA+CGG | 0.594839 | 7.4:-429887 | MS.gene050695:CDS |
| TTCCCCAGCTTCAACTTACG+TGG | 0.601446 | 7.4:+429965 | None:intergenic |
| AGGGAGTGCTTATGTCACAA+TGG | 0.612091 | 7.4:-429744 | MS.gene050695:CDS |
| AAGGTTGCAGACGTAAACTT+GGG | 0.613456 | 7.4:+429937 | None:intergenic |
| TTGAGAGAGATAAGAGACAA+AGG | 0.615725 | 7.4:+429344 | None:intergenic |
| AATGGACGCGCTGTGACGCG+AGG | 0.621619 | 7.4:+430009 | None:intergenic |
| ACTTGCTGCATTGGATGGAT+CGG | 0.623524 | 7.4:-429696 | MS.gene050695:intron |
| GAGTATCACAGCTTCTAGGA+AGG | 0.626004 | 7.4:+429918 | None:intergenic |
| TGGAAATGTGGCTAGTGTGA+GGG | 0.626364 | 7.4:-429411 | MS.gene050695:CDS |
| ATAGTTCTTCTTCTCACGGG+AGG | 0.629773 | 7.4:+429521 | None:intergenic |
| TTGGAAATGTGGCTAGTGTG+AGG | 0.645229 | 7.4:-429412 | MS.gene050695:CDS |
| ACGTACCTCGGTAGATAGAA+CGG | 0.653839 | 7.4:+429862 | None:intergenic |
| CGAACTCTAGTGGTTAGAGA+GGG | 0.654487 | 7.4:-429196 | MS.gene050695:CDS |
| TGTTGCAAGATTTGAATCAG+GGG | 0.656854 | 7.4:-429388 | MS.gene050695:CDS |
| AACCACGTAAGTTGAAGCTG+GGG | 0.663989 | 7.4:-429967 | MS.gene050695:CDS |
| CTTATGGTAGAGTAACGAAG+AGG | 0.714741 | 7.4:+430102 | None:intergenic |
| AAGAGACAAAGGCATAGACA+CGG | 0.730141 | 7.4:+429355 | None:intergenic |
| GTAGATAGAACGGTACCGTG+AGG | 0.731002 | 7.4:+429872 | None:intergenic |
| CGGTACCGTTCTATCTACCG+AGG | 0.742490 | 7.4:-429867 | MS.gene050695:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATTATTACTTGTAATGTAA+TGG | - | chr7.4:429497-429516 | MS.gene050695:CDS | 20.0% |
| !!! | ATATTTTACAGTTTCATTGA+GGG | + | chr7.4:430023-430042 | None:intergenic | 20.0% |
| ! | AGAAGAACTATATACTATGA+AGG | - | chr7.4:429810-429829 | MS.gene050695:intron | 25.0% |
| !! | CATATTTTACAGTTTCATTG+AGG | + | chr7.4:430024-430043 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCGTTTGAATTGA+AGG | - | chr7.4:429707-429726 | MS.gene050695:CDS | 25.0% |
| AGACATCTCTTTGGTAAATT+TGG | - | chr7.4:429888-429907 | MS.gene050695:CDS | 30.0% | |
| CTTTGGTAAATTTGGAAATG+TGG | - | chr7.4:429896-429915 | MS.gene050695:CDS | 30.0% | |
| GCAGTAGAAAAAGTGAAAAA+AGG | + | chr7.4:430053-430072 | None:intergenic | 30.0% | |
| GTAGAAAAAGTGAAAAAAGG+TGG | + | chr7.4:430050-430069 | None:intergenic | 30.0% | |
| GTATATAGTTCTTCTTCTCA+CGG | + | chr7.4:429805-429824 | None:intergenic | 30.0% | |
| TATATAGTTCTTCTTCTCAC+GGG | + | chr7.4:429804-429823 | None:intergenic | 30.0% | |
| ! | TTCTTCTTCGTTTTCTACAA+TGG | + | chr7.4:429331-429350 | None:intergenic | 30.0% |
| ATACTATGAAGGTCCTCATA+AGG | - | chr7.4:429821-429840 | MS.gene050695:intron | 35.0% | |
| ATCTTATAATGCTGTGCTGT+AGG | - | chr7.4:429521-429540 | MS.gene050695:CDS | 35.0% | |
| GAAAAAGTGAAAAAAGGTGG+AGG | + | chr7.4:430047-430066 | None:intergenic | 35.0% | |
| GTGTTGCAAGATTTGAATCA+GGG | - | chr7.4:429930-429949 | MS.gene050695:CDS | 35.0% | |
| TCGTTTGAATTGAAGGATGT+TGG | - | chr7.4:429714-429733 | MS.gene050695:CDS | 35.0% | |
| TGTTGCAAGATTTGAATCAG+GGG | - | chr7.4:429931-429950 | MS.gene050695:CDS | 35.0% | |
| TTGAATTGAAGGATGTTGGT+GGG | - | chr7.4:429718-429737 | MS.gene050695:CDS | 35.0% | |
| TTGAGAGAGATAAGAGACAA+AGG | + | chr7.4:429978-429997 | None:intergenic | 35.0% | |
| TTTGAATTGAAGGATGTTGG+TGG | - | chr7.4:429717-429736 | MS.gene050695:CDS | 35.0% | |
| ! | TAAAAATGCACTTGCTGCAT+TGG | - | chr7.4:429614-429633 | MS.gene050695:intron | 35.0% |
| ! | TTGTTCTTGCAGCAATTTTG+TGG | - | chr7.4:430099-430118 | MS.gene050695:CDS | 35.0% |
| AAGGTTGCAGACGTAAACTT+GGG | + | chr7.4:429385-429404 | None:intergenic | 40.0% | |
| AGCAACATACTTACGTACCT+CGG | + | chr7.4:429472-429491 | None:intergenic | 40.0% | |
| AGTTTCATTGAGGGACAAAG+AGG | + | chr7.4:430014-430033 | None:intergenic | 40.0% | |
| CTTATGGTAGAGTAACGAAG+AGG | + | chr7.4:429220-429239 | None:intergenic | 40.0% | |
| GTCCTCATAAGGTGTATGTT+GGG | - | chr7.4:429832-429851 | MS.gene050695:intron | 40.0% | |
| TAACGAAGAGGAAGAGAAAG+AGG | + | chr7.4:429208-429227 | None:intergenic | 40.0% | |
| TTCCCAACATACACCTTATG+AGG | + | chr7.4:429837-429856 | None:intergenic | 40.0% | |
| ! | AAGAGACAAAGGCATAGACA+CGG | + | chr7.4:429967-429986 | None:intergenic | 40.0% |
| ! | ATTTTGTGGTCGAACTCTAG+TGG | - | chr7.4:430113-430132 | MS.gene050695:CDS | 40.0% |
| ! | GGTGTTGCAAGATTTGAATC+AGG | - | chr7.4:429929-429948 | MS.gene050695:CDS | 40.0% |
| AAGAGATGTCTCACGTCTTC+AGG | + | chr7.4:429879-429898 | None:intergenic | 45.0% | |
| ACGTACCTCGGTAGATAGAA+CGG | + | chr7.4:429460-429479 | None:intergenic | 45.0% | |
| ATAGTTCTTCTTCTCACGGG+AGG | + | chr7.4:429801-429820 | None:intergenic | 45.0% | |
| CAGAGACTGGTGAGAGTAAA+GGG | - | chr7.4:429556-429575 | MS.gene050695:CDS | 45.0% | |
| CGAACTCTAGTGGTTAGAGA+GGG | - | chr7.4:430123-430142 | MS.gene050695:CDS | 45.0% | |
| CTTCATCTCTTCACTCCTCA+CGG | - | chr7.4:429432-429451 | MS.gene050695:CDS | 45.0% | |
| GAAACACAGAGTAGCAGAGT+TGG | + | chr7.4:429184-429203 | None:intergenic | 45.0% | |
| GAAGACGTGAGACATCTCTT+TGG | - | chr7.4:429879-429898 | MS.gene050695:CDS | 45.0% | |
| GAAGGTTGCAGACGTAAACT+TGG | + | chr7.4:429386-429405 | None:intergenic | 45.0% | |
| GAGGAGTGAAGAGATGAAGT+AGG | + | chr7.4:429431-429450 | None:intergenic | 45.0% | |
| GAGTATCCAACTCCAAGTAG+TGG | + | chr7.4:429246-429265 | None:intergenic | 45.0% | |
| GCTGCAAGAACAAGACTAGT+AGG | + | chr7.4:430092-430111 | None:intergenic | 45.0% | |
| GGTCCTCATAAGGTGTATGT+TGG | - | chr7.4:429831-429850 | MS.gene050695:intron | 45.0% | |
| TACCATAAGCAGCCACTACT+TGG | - | chr7.4:429231-429250 | MS.gene050695:intron | 45.0% | |
| TCGAACTCTAGTGGTTAGAG+AGG | - | chr7.4:430122-430141 | MS.gene050695:CDS | 45.0% | |
| TCTCACCAGTCTCTGCATTT+CGG | + | chr7.4:429551-429570 | None:intergenic | 45.0% | |
| TCTCTCTCAAAGAGAACGTG+AGG | - | chr7.4:429988-430007 | MS.gene050695:CDS | 45.0% | |
| TGCAGACGTAAACTTGGGTT+GGG | + | chr7.4:429380-429399 | None:intergenic | 45.0% | |
| TGGAAATGTGGCTAGTGTGA+GGG | - | chr7.4:429908-429927 | MS.gene050695:CDS | 45.0% | |
| TGTCGAGTATCACAGCTTCT+AGG | + | chr7.4:429408-429427 | None:intergenic | 45.0% | |
| TTGCAGACGTAAACTTGGGT+TGG | + | chr7.4:429381-429400 | None:intergenic | 45.0% | |
| TTGGAAATGTGGCTAGTGTG+AGG | - | chr7.4:429907-429926 | MS.gene050695:CDS | 45.0% | |
| ! | AACCACGTAAGTTGAAGCTG+GGG | - | chr7.4:429352-429371 | MS.gene050695:CDS | 45.0% |
| ! | AATGCACTTGCTGCATTGGA+TGG | - | chr7.4:429618-429637 | MS.gene050695:intron | 45.0% |
| ! | ACAACCACGTAAGTTGAAGC+TGG | - | chr7.4:429350-429369 | MS.gene050695:CDS | 45.0% |
| ! | ACTTGCTGCATTGGATGGAT+CGG | - | chr7.4:429623-429642 | MS.gene050695:intron | 45.0% |
| ! | CAACCACGTAAGTTGAAGCT+GGG | - | chr7.4:429351-429370 | MS.gene050695:CDS | 45.0% |
| ! | GAGTATCACAGCTTCTAGGA+AGG | + | chr7.4:429404-429423 | None:intergenic | 45.0% |
| !! | AGGGAGTGCTTATGTCACAA+TGG | - | chr7.4:429575-429594 | MS.gene050695:CDS | 45.0% |
| !! | GGGAGTGCTTATGTCACAAT+GGG | - | chr7.4:429576-429595 | MS.gene050695:CDS | 45.0% |
| AAGCAGCCACTACTTGGAGT+TGG | - | chr7.4:429237-429256 | MS.gene050695:intron | 50.0% | |
| CGCGAGGAGAAAGAAGGATA+AGG | + | chr7.4:429297-429316 | None:intergenic | 50.0% | |
| CTCCAAGTAGTGGCTGCTTA+TGG | + | chr7.4:429236-429255 | None:intergenic | 50.0% | |
| GCAGAGACTGGTGAGAGTAA+AGG | - | chr7.4:429555-429574 | MS.gene050695:CDS | 50.0% | |
| GTAGATAGAACGGTACCGTG+AGG | + | chr7.4:429450-429469 | None:intergenic | 50.0% | |
| GTTTGCCGAAATGCAGAGAC+TGG | - | chr7.4:429543-429562 | MS.gene050695:CDS | 50.0% | |
| TCTAGTGGTTAGAGAGGGTG+TGG | - | chr7.4:430128-430147 | MS.gene050695:CDS | 50.0% | |
| TTCCCCAGCTTCAACTTACG+TGG | + | chr7.4:429357-429376 | None:intergenic | 50.0% | |
| CGGTACCGTTCTATCTACCG+AGG | - | chr7.4:429452-429471 | MS.gene050695:CDS | 55.0% | |
| CTGTGACGCGAGGAGAAAGA+AGG | + | chr7.4:429303-429322 | None:intergenic | 55.0% | |
| ! | ATGTTGGTGGGCGCGAAATG+CGG | - | chr7.4:429730-429749 | MS.gene050695:CDS | 55.0% |
| ! | TGTTGGTGGGCGCGAAATGC+GGG | - | chr7.4:429731-429750 | MS.gene050695:CDS | 60.0% |
| AATGGACGCGCTGTGACGCG+AGG | + | chr7.4:429313-429332 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 429174 | 430167 | 429174 | ID=MS.gene050695 |
| chr7.4 | mRNA | 429174 | 430167 | 429174 | ID=MS.gene050695.t1;Parent=MS.gene050695 |
| chr7.4 | exon | 429868 | 430167 | 429868 | ID=MS.gene050695.t1.exon1;Parent=MS.gene050695.t1 |
| chr7.4 | CDS | 429868 | 430167 | 429868 | ID=cds.MS.gene050695.t1;Parent=MS.gene050695.t1 |
| chr7.4 | exon | 429697 | 429798 | 429697 | ID=MS.gene050695.t1.exon2;Parent=MS.gene050695.t1 |
| chr7.4 | CDS | 429697 | 429798 | 429697 | ID=cds.MS.gene050695.t1;Parent=MS.gene050695.t1 |
| chr7.4 | exon | 429337 | 429612 | 429337 | ID=MS.gene050695.t1.exon3;Parent=MS.gene050695.t1 |
| chr7.4 | CDS | 429337 | 429612 | 429337 | ID=cds.MS.gene050695.t1;Parent=MS.gene050695.t1 |
| chr7.4 | exon | 429174 | 429230 | 429174 | ID=MS.gene050695.t1.exon4;Parent=MS.gene050695.t1 |
| chr7.4 | CDS | 429174 | 429230 | 429174 | ID=cds.MS.gene050695.t1;Parent=MS.gene050695.t1 |
| Gene Sequence |
| Protein sequence |
