AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene014659

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014659.t1 MTR_3g110110 99.363 157 1 0 1 157 1 157 2.88e-118 330
MS.gene014659.t1 MTR_4g073240 42.177 147 81 3 7 153 5 147 3.99e-35 119
MS.gene014659.t1 MTR_8g071040 42.177 147 81 3 7 153 5 147 5.58e-35 119
MS.gene014659.t1 MTR_5g075580 40.816 147 83 3 7 153 5 147 1.17e-34 118
MS.gene014659.t1 MTR_1g021150 41.497 147 82 3 7 153 5 147 1.21e-34 118
MS.gene014659.t1 MTR_3g062450 40.816 147 83 3 7 153 5 147 1.36e-34 118
MS.gene014659.t1 MTR_7g116940 40.816 147 83 3 7 153 5 147 3.39e-34 117
MS.gene014659.t1 MTR_4g108080 38.732 142 83 3 4 145 5 142 9.79e-34 116
MS.gene014659.t1 MTR_2g078010 40.411 146 83 3 7 152 9 150 1.57e-33 115
MS.gene014659.t1 MTR_8g468530 38.732 142 83 3 4 145 21 158 1.60e-33 116
MS.gene014659.t1 MTR_7g116940 39.610 154 82 4 7 153 5 154 1.03e-32 114
MS.gene014659.t1 MTR_3g098780 42.373 118 67 1 6 123 5 121 3.05e-32 114
MS.gene014659.t1 MTR_4g073240 45.000 120 64 2 34 153 1 118 3.34e-32 111
MS.gene014659.t1 MTR_1g021150 44.628 121 65 2 33 153 37 155 5.06e-32 112
MS.gene014659.t1 MTR_2g078010 39.706 136 79 2 7 142 9 141 5.30e-32 112
MS.gene014659.t1 MTR_3g098780 42.373 118 67 1 6 123 29 145 6.40e-32 113
MS.gene014659.t1 MTR_5g075580 44.167 120 65 2 34 153 1 118 7.32e-32 110
MS.gene014659.t1 MTR_2g078010 36.875 160 83 4 7 152 9 164 1.61e-29 106
MS.gene014659.t1 MTR_4g108080 41.667 108 60 2 4 111 5 109 8.91e-28 100
MS.gene014659.t1 MTR_2g078010 44.118 102 54 2 7 108 9 107 6.41e-26 95.1
MS.gene014659.t1 MTR_7g116940 43.519 108 58 2 7 114 5 109 1.08e-25 95.1
MS.gene014659.t1 MTR_7g087590 36.913 149 90 3 7 155 14 158 1.54e-25 98.6
MS.gene014659.t1 MTR_4g108080 39.815 108 63 2 38 145 37 142 2.79e-25 94.7
MS.gene014659.t1 MTR_1g095510 41.905 105 60 1 21 125 4 107 1.71e-24 92.4
MS.gene014659.t1 MTR_1g095510 41.905 105 60 1 21 125 58 161 2.76e-24 93.6
MS.gene014659.t1 MTR_4g063490 33.613 119 65 2 28 133 28 145 4.59e-23 89.7
MS.gene014659.t1 MTR_4g076200 36.607 112 70 1 20 131 6 116 1.02e-22 87.8
MS.gene014659.t1 MTR_8g028920 31.618 136 89 3 21 155 18 150 1.46e-22 89.0
MS.gene014659.t1 MTR_2g096690 34.454 119 64 2 28 133 28 145 2.40e-22 87.8
MS.gene014659.t1 MTR_4g076200 39.216 102 61 1 30 131 57 157 3.44e-22 87.8
MS.gene014659.t1 MTR_2g096690 34.783 115 61 2 28 129 28 141 4.55e-22 87.0
MS.gene014659.t1 MTR_5g009020 36.607 112 70 1 20 131 47 157 5.21e-22 87.0
MS.gene014659.t1 MTR_1g095510 41.053 95 55 1 21 115 58 151 5.61e-21 84.3
MS.gene014659.t1 MTR_4g106690 29.630 135 91 3 14 147 11 142 7.61e-21 84.3
MS.gene014659.t1 MTR_8g085690 37.500 120 72 2 1 120 20 136 1.77e-20 82.8
MS.gene014659.t1 MTR_8g098595 32.456 114 75 2 43 155 23 135 5.97e-20 81.6
MS.gene014659.t1 MTR_8g028920 33.945 109 70 2 48 155 4 111 2.53e-19 79.3
MS.gene014659.t1 MTR_5g019480 30.827 133 88 3 3 135 29 157 3.75e-18 77.4
MS.gene014659.t1 MTR_5g019480 30.827 133 88 3 3 135 32 160 3.90e-18 77.4
MS.gene014659.t1 MTR_4g073240 45.238 84 44 2 70 153 4 85 7.72e-18 73.9
MS.gene014659.t1 MTR_5g019480 31.532 111 74 2 25 135 1 109 8.14e-17 72.4
MS.gene014659.t1 MTR_2g096690 44.776 67 36 1 28 94 28 93 2.57e-16 70.9
MS.gene014659.t1 MTR_4g094872 30.719 153 95 6 4 149 5 153 2.63e-16 72.0
MS.gene014659.t1 MTR_4g121960 34.513 113 64 4 7 115 14 120 1.11e-15 72.8
MS.gene014659.t1 MTR_8g076490 37.864 103 59 3 7 108 19 117 1.04e-14 67.8
MS.gene014659.t1 MTR_5g016630 29.496 139 82 4 4 132 5 137 1.25e-14 67.4
MS.gene014659.t1 MTR_5g021260 41.558 77 43 2 33 108 42 117 2.79e-14 66.6
MS.gene014659.t1 MTR_8g023380 28.800 125 79 4 2 122 4 122 2.14e-11 60.1
MS.gene014659.t1 MTR_1g073600 33.333 66 44 0 39 104 27 92 5.29e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014659.t1 AT5G25760 94.268 157 9 0 1 157 1 157 1.16e-112 316
MS.gene014659.t1 AT5G25760 94.268 157 9 0 1 157 1 157 1.16e-112 316
MS.gene014659.t1 AT5G53300 42.857 147 80 3 7 153 5 147 4.30e-36 122
MS.gene014659.t1 AT5G53300 42.857 147 80 3 7 153 5 147 4.30e-36 122
MS.gene014659.t1 AT5G53300 42.857 147 80 3 7 153 5 147 4.30e-36 122
MS.gene014659.t1 AT4G27960 42.177 147 81 3 7 153 5 147 6.29e-36 122
MS.gene014659.t1 AT1G64230 42.857 147 80 3 7 153 5 147 1.10e-35 121
MS.gene014659.t1 AT1G64230 42.857 147 80 3 7 153 5 147 1.10e-35 121
MS.gene014659.t1 AT4G27960 40.523 153 87 3 1 153 29 177 1.10e-35 122
MS.gene014659.t1 AT3G08690 41.497 147 82 3 7 153 5 147 1.93e-35 120
MS.gene014659.t1 AT3G08690 41.497 147 82 3 7 153 5 147 1.93e-35 120
MS.gene014659.t1 AT2G16740 42.282 149 78 4 7 153 5 147 1.97e-35 120
MS.gene014659.t1 AT5G41700 41.497 147 82 3 7 153 5 147 4.65e-35 119
MS.gene014659.t1 AT5G41700 41.497 147 82 3 7 153 5 147 4.65e-35 119
MS.gene014659.t1 AT5G41700 41.497 147 82 3 7 153 5 147 4.65e-35 119
MS.gene014659.t1 AT1G16890 41.096 146 82 3 7 152 9 150 4.57e-34 117
MS.gene014659.t1 AT1G64230 40.260 154 83 4 7 153 5 156 7.10e-34 117
MS.gene014659.t1 AT5G41700 40.667 150 80 4 7 153 5 148 7.74e-34 116
MS.gene014659.t1 AT1G14400 38.356 146 79 3 4 149 5 139 9.20e-34 116
MS.gene014659.t1 AT1G14400 38.356 146 79 3 4 149 5 139 9.20e-34 116
MS.gene014659.t1 AT1G78870 41.096 146 82 3 7 152 9 150 1.38e-33 116
MS.gene014659.t1 AT2G02760 38.732 142 83 3 4 145 5 142 1.41e-33 116
MS.gene014659.t1 AT2G02760 38.732 142 83 3 4 145 5 142 1.41e-33 116
MS.gene014659.t1 AT2G02760 38.732 142 83 3 4 145 5 142 1.41e-33 116
MS.gene014659.t1 AT2G02760 38.732 142 83 3 4 145 5 142 1.41e-33 116
MS.gene014659.t1 AT1G16890 43.077 130 72 2 23 152 32 159 4.59e-33 115
MS.gene014659.t1 AT5G56150 39.456 147 85 3 7 153 5 147 4.83e-33 114
MS.gene014659.t1 AT5G62540 40.580 138 78 3 4 141 5 138 8.15e-33 114
MS.gene014659.t1 AT1G64230 46.281 121 63 2 33 153 71 189 2.47e-32 114
MS.gene014659.t1 AT1G64230 46.281 121 63 2 33 153 71 189 2.47e-32 114
MS.gene014659.t1 AT1G16890 45.690 116 61 2 37 152 4 117 3.81e-32 111
MS.gene014659.t1 AT3G08700 40.136 147 85 3 7 153 5 148 4.04e-32 112
MS.gene014659.t1 AT3G08700 40.136 147 85 3 7 153 5 148 4.04e-32 112
MS.gene014659.t1 AT1G78870 45.690 116 61 2 37 152 4 117 8.99e-32 110
MS.gene014659.t1 AT5G50870 37.333 150 86 3 6 152 5 149 1.08e-30 110
MS.gene014659.t1 AT5G50870 41.525 118 68 1 6 123 5 121 1.93e-30 109
MS.gene014659.t1 AT1G78870 45.299 117 61 3 37 152 4 118 5.59e-30 105
MS.gene014659.t1 AT1G36340 40.336 119 69 2 30 148 32 148 1.76e-28 103
MS.gene014659.t1 AT1G36340 40.336 119 69 2 30 148 32 148 1.76e-28 103
MS.gene014659.t1 AT5G53300 47.525 101 50 2 7 107 5 102 7.09e-27 97.8
MS.gene014659.t1 AT5G05080 37.500 144 87 3 13 155 17 158 8.58e-27 101
MS.gene014659.t1 AT5G05080 37.500 144 87 3 13 155 17 158 8.58e-27 101
MS.gene014659.t1 AT5G05080 37.500 144 87 3 13 155 17 158 8.58e-27 101
MS.gene014659.t1 AT5G05080 37.500 144 87 3 13 155 17 158 8.58e-27 101
MS.gene014659.t1 AT5G41700 46.535 101 51 2 7 107 5 102 9.27e-27 98.6
MS.gene014659.t1 AT1G78870 45.098 102 53 2 7 108 9 107 1.67e-26 97.1
MS.gene014659.t1 AT5G56150 42.718 103 56 2 7 109 5 104 8.97e-25 92.4
MS.gene014659.t1 AT3G13550 39.024 123 72 2 1 123 34 153 4.83e-24 92.4
MS.gene014659.t1 AT3G55380 30.935 139 82 2 28 153 29 166 1.30e-23 90.9
MS.gene014659.t1 AT3G13550 38.333 120 71 2 1 120 34 150 2.94e-23 90.1
MS.gene014659.t1 AT2G46030 33.577 137 87 3 21 156 18 151 3.00e-23 90.5
MS.gene014659.t1 AT2G46030 33.577 137 87 3 21 156 18 151 3.00e-23 90.5
MS.gene014659.t1 AT2G46030 33.577 137 87 3 21 156 21 154 3.28e-23 90.5
MS.gene014659.t1 AT2G46030 33.577 137 87 3 21 156 21 154 3.28e-23 90.5
MS.gene014659.t1 AT3G20060 37.838 111 68 1 21 131 7 116 5.37e-23 88.6
MS.gene014659.t1 AT2G46030 33.577 137 87 3 21 156 90 223 6.96e-23 91.3
MS.gene014659.t1 AT3G20060 37.838 111 68 1 21 131 52 161 8.81e-23 89.4
MS.gene014659.t1 AT3G46460 35.294 119 63 2 28 133 28 145 4.94e-22 87.0
MS.gene014659.t1 AT5G41340 30.137 146 100 2 13 157 8 152 6.43e-22 87.0
MS.gene014659.t1 AT5G59300 33.613 119 65 2 28 133 28 145 6.53e-22 86.7
MS.gene014659.t1 AT1G63800 34.483 116 74 2 41 155 21 135 8.43e-22 86.7
MS.gene014659.t1 AT1G50490 39.216 102 61 1 30 131 60 160 8.97e-22 86.7
MS.gene014659.t1 AT1G63800 35.088 114 72 2 43 155 38 150 1.23e-21 86.3
MS.gene014659.t1 AT3G24515 44.086 93 47 2 39 127 49 140 1.80e-21 89.7
MS.gene014659.t1 AT3G24515 41.121 107 55 3 25 127 63 165 4.93e-21 88.6
MS.gene014659.t1 AT5G41340 35.455 110 69 2 49 157 9 117 4.21e-20 81.6
MS.gene014659.t1 AT2G32790 34.899 149 90 5 2 148 28 171 4.29e-18 77.0
MS.gene014659.t1 AT3G55380 25.434 173 81 3 28 153 29 200 6.96e-17 74.3
MS.gene014659.t1 AT2G18600 30.534 131 87 3 3 133 31 157 9.78e-17 73.6
MS.gene014659.t1 AT2G18600 30.534 131 87 3 3 133 31 157 9.78e-17 73.6
MS.gene014659.t1 AT4G36800 29.771 131 88 3 3 133 30 156 4.03e-16 72.0
MS.gene014659.t1 AT4G36800 29.771 131 88 3 3 133 30 156 4.03e-16 72.0
MS.gene014659.t1 AT1G45050 40.000 110 47 4 7 108 19 117 4.83e-16 71.2
MS.gene014659.t1 AT3G57870 35.294 102 63 2 33 132 38 138 3.05e-15 69.3
MS.gene014659.t1 AT3G17000 34.959 123 62 6 7 123 15 125 3.65e-15 71.2
MS.gene014659.t1 AT1G75440 42.857 77 42 2 33 108 42 117 8.33e-15 68.2
MS.gene014659.t1 AT3G46460 32.990 97 51 2 50 133 8 103 8.09e-14 64.7
MS.gene014659.t1 AT3G46460 32.990 97 51 2 50 133 8 103 8.09e-14 64.7
MS.gene014659.t1 AT5G42990 41.558 77 43 2 33 108 42 117 8.22e-14 65.5
MS.gene014659.t1 AT4G36410 37.864 103 59 3 7 108 19 117 1.24e-13 65.1

Find 32 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAGCTATAATTGCATTGA+TGG 0.267079 3.1:+87699327 MS.gene014659:CDS
TTCAGTGGGCTGTCAGGTTC+TGG 0.292721 3.1:-87699355 None:intergenic
CTACGTTCAGGTGATGTTAG+AGG 0.363620 3.1:+87699969 MS.gene014659:CDS
TGTACCTTAAAATGCACGTT+GGG 0.399307 3.1:-87696995 None:intergenic
TCGCAAACGAGTTGAATATC+AGG 0.409108 3.1:-87696724 None:intergenic
TCACAATTCAGTGGGCTGTC+AGG 0.446936 3.1:-87699361 None:intergenic
AGCCCACTGAATTGTGATTC+AGG 0.455844 3.1:+87699367 MS.gene014659:CDS
GCAGGTAATCTTCTACGTTC+AGG 0.470047 3.1:+87699957 MS.gene014659:intron
TAAATGGACAGCTTTAATCA+AGG 0.484965 3.1:+87696762 MS.gene014659:CDS
CGAACTTGAGGAGGTTGTAA+AGG 0.493381 3.1:-87696950 None:intergenic
GATATCTAGGCAAATCTCTC+CGG 0.497339 3.1:-87699260 None:intergenic
ATCAAGGGCGAGGCTGTTCA+AGG 0.501997 3.1:+87696666 MS.gene014659:CDS
TAGATATCTTGAAAACTGCT+TGG 0.517403 3.1:+87699275 MS.gene014659:CDS
TAACGCAGGCATCAAGGGCG+AGG 0.520499 3.1:+87696656 MS.gene014659:intron
GGTTGTAAAGGATAATGCTC+AGG 0.528178 3.1:-87696938 None:intergenic
ACAGATTGCAGAGTCCATGC+GGG 0.543633 3.1:-87699301 None:intergenic
CTTCAGAGACTCCATATGAC+GGG 0.544665 3.1:+87696888 MS.gene014659:CDS
CCATGGCAAGAATGTACACT+AGG 0.549301 3.1:+87700000 MS.gene014659:CDS
AAACTGCTTGGAGCCCCGCA+TGG 0.558893 3.1:+87699287 MS.gene014659:CDS
CAGGAACAGAAAATGCAAGC+TGG 0.568612 3.1:-87696919 None:intergenic
CCTAGTGTACATTCTTGCCA+TGG 0.608526 3.1:-87700000 None:intergenic
CCGTCATATGGAGTCTCTGA+AGG 0.612997 3.1:-87696887 None:intergenic
AACCTGAATCACAATTCAGT+GGG 0.616964 3.1:-87699369 None:intergenic
CAACCTGAATCACAATTCAG+TGG 0.619957 3.1:-87699370 None:intergenic
TGTTAGAGGCTATCAGTCCA+TGG 0.632305 3.1:+87699983 MS.gene014659:CDS
AACAGATTGCAGAGTCCATG+CGG 0.633452 3.1:-87699302 None:intergenic
CCTTCAGAGACTCCATATGA+CGG 0.637278 3.1:+87696887 MS.gene014659:CDS
TTGTACCTTAAAATGCACGT+TGG 0.668554 3.1:-87696996 None:intergenic
GTACCTTAAAATGCACGTTG+GGG 0.672523 3.1:-87696994 None:intergenic
TTCAGAGACTCCATATGACG+GGG 0.673654 3.1:+87696889 MS.gene014659:CDS
CAGATTGCAGAGTCCATGCG+GGG 0.695314 3.1:-87699300 None:intergenic
TCAGAGACTCCATATGACGG+GGG 0.759301 3.1:+87696890 MS.gene014659:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACATCAAAAATTAAATAAA+TGG - chr3.1:87698455-87698474 None:intergenic 10.0%
!!! AAATGATTTTTTTAACAAAA+TGG - chr3.1:87697874-87697893 None:intergenic 10.0%
!!! TTGTTAAAAAAATCATTTTT+AGG + chr3.1:87697876-87697895 MS.gene014659:intron 10.0%
!!! TTTAAAAAAAATAGATTTTG+AGG - chr3.1:87698079-87698098 None:intergenic 10.0%
!!! TTTAGAAAAAAAATAGATTT+TGG - chr3.1:87697934-87697953 None:intergenic 10.0%
!! ACAATTGTATGATAAAAATA+GGG + chr3.1:87697079-87697098 MS.gene014659:intron 15.0%
!! GATGTTTAAAAATAGTTAAT+TGG - chr3.1:87699604-87699623 None:intergenic 15.0%
!! TCAAATTTATAAACAACAAA+AGG - chr3.1:87699156-87699175 None:intergenic 15.0%
!!! AAAATAAGGTGTATATATTT+TGG - chr3.1:87699849-87699868 None:intergenic 15.0%
!!! AGTTTTATTATTTATTTGGA+GGG - chr3.1:87699469-87699488 None:intergenic 15.0%
!!! ATCTTCAAAAAATGATTTTT+AGG + chr3.1:87697983-87698002 MS.gene014659:intron 15.0%
!!! CTATTTTTTTTCTAAATACA+AGG + chr3.1:87697938-87697957 MS.gene014659:intron 15.0%
!!! GTTTATTTTGTTCAATATTA+GGG + chr3.1:87696863-87696882 MS.gene014659:intron 15.0%
!!! TAGCAGTTTTATTATTTATT+TGG - chr3.1:87699473-87699492 None:intergenic 15.0%
!! AAAAATTAAATAAATGGCAC+TGG - chr3.1:87698449-87698468 None:intergenic 20.0%
!! AGAGAAAGAAAAAAATGATA+TGG - chr3.1:87699412-87699431 None:intergenic 20.0%
!! ATCTAATATACCAAATTAGT+TGG + chr3.1:87697510-87697529 MS.gene014659:intron 20.0%
!! CAAACGATGTTAATTTATAA+GGG + chr3.1:87698653-87698672 MS.gene014659:intron 20.0%
!! CAATAGCTAATATATCAAAT+TGG + chr3.1:87697426-87697445 MS.gene014659:intron 20.0%
!! CACAATTGTATGATAAAAAT+AGG + chr3.1:87697078-87697097 MS.gene014659:intron 20.0%
!! GATAACTTCATTTATTCAAT+TGG + chr3.1:87699178-87699197 MS.gene014659:intron 20.0%
!! TCAAAAAAATCCAAAACAAA+CGG - chr3.1:87697777-87697796 None:intergenic 20.0%
!!! AGTATAGCTTTATTGATTAT+AGG + chr3.1:87699529-87699548 MS.gene014659:intron 20.0%
!!! ATGATTCCAACATTTTTAAA+TGG + chr3.1:87696746-87696765 MS.gene014659:CDS 20.0%
!!! ATTAACTTGTATTTGTTTGT+TGG + chr3.1:87696548-87696567 MS.gene014659:intron 20.0%
!!! CAGTTTTATTATTTATTTGG+AGG - chr3.1:87699470-87699489 None:intergenic 20.0%
!!! GGTTTATTTTGTTCAATATT+AGG + chr3.1:87696862-87696881 MS.gene014659:intron 20.0%
!!! TAACATTTTAACATATCTCA+GGG - chr3.1:87697122-87697141 None:intergenic 20.0%
!!! TTGAAGTATGGATTTTAATT+AGG + chr3.1:87697679-87697698 MS.gene014659:intron 20.0%
! AAGAAACTTGTATTCAGATA+TGG + chr3.1:87699497-87699516 MS.gene014659:intron 25.0%
! AGAGCTTGATTTAAAAATAG+AGG + chr3.1:87698709-87698728 MS.gene014659:intron 25.0%
! AGCTAATATATCAAATTGGT+TGG + chr3.1:87697430-87697449 MS.gene014659:intron 25.0%
! AGCTTGATTTAAAAATAGAG+GGG + chr3.1:87698711-87698730 MS.gene014659:intron 25.0%
! ATCAATAAAGCTATACTACA+TGG - chr3.1:87699526-87699545 None:intergenic 25.0%
! CCAGTAAGTTAATGTTAATT+CGG + chr3.1:87697715-87697734 MS.gene014659:intron 25.0%
! GAAAGCAAAAATAATTGACT+AGG - chr3.1:87699134-87699153 None:intergenic 25.0%
! GAGCTTGATTTAAAAATAGA+GGG + chr3.1:87698710-87698729 MS.gene014659:intron 25.0%
! GCAAACGATGTTAATTTATA+AGG + chr3.1:87698652-87698671 MS.gene014659:intron 25.0%
! GTTTCAGTACAAAGAAAATA+AGG - chr3.1:87699863-87699882 None:intergenic 25.0%
! GTTTGATTCAAAAGTTAAAC+TGG - chr3.1:87698486-87698505 None:intergenic 25.0%
! TATAATGAACAACGAAAATC+TGG - chr3.1:87699748-87699767 None:intergenic 25.0%
! TCAATAAAGCTATACTACAT+GGG - chr3.1:87699525-87699544 None:intergenic 25.0%
! TTTATTATTTATTTGGAGGG+AGG - chr3.1:87699466-87699485 None:intergenic 25.0%
! TTTGACATTTCACTTAATGA+TGG + chr3.1:87699675-87699694 MS.gene014659:intron 25.0%
!! TGTTATTTGAAGATATCTCA+GGG + chr3.1:87698741-87698760 MS.gene014659:intron 25.0%
!!! AACATTTTAACATATCTCAG+GGG - chr3.1:87697121-87697140 None:intergenic 25.0%
!!! ATATATTTTGGAATGAGTTG+CGG - chr3.1:87699837-87699856 None:intergenic 25.0%
!!! ATTTCTCACTTATTTTCTGT+TGG + chr3.1:87699930-87699949 MS.gene014659:intron 25.0%
!!! CAGTATTTTTTGGAAGATAA+AGG + chr3.1:87699794-87699813 MS.gene014659:intron 25.0%
!!! CTATCCTCGTTTAATTTTAA+AGG - chr3.1:87698691-87698710 None:intergenic 25.0%
!!! CTGAGGAATTTTTGTTTTAA+TGG + chr3.1:87698626-87698645 MS.gene014659:intron 25.0%
!!! CTTAGCATATCAGTATTTTT+TGG + chr3.1:87699784-87699803 MS.gene014659:intron 25.0%
!!! GGAATTTTTGTTTTAATGGA+TGG + chr3.1:87698630-87698649 MS.gene014659:intron 25.0%
!!! GTAACATTTTAACATATCTC+AGG - chr3.1:87697123-87697142 None:intergenic 25.0%
!!! GTTTAACTTTTGAATCAAAC+CGG + chr3.1:87698486-87698505 MS.gene014659:intron 25.0%
AACAATAAGCCAACCAATTT+GGG + chr3.1:87697622-87697641 MS.gene014659:intron 30.0%
AACTGAAAAAAGCAAAGTCA+CGG - chr3.1:87697358-87697377 None:intergenic 30.0%
AAGGTAACAGTGTTAAAGTT+GGG - chr3.1:87697184-87697203 None:intergenic 30.0%
AATTAAGATTTAGACTGGTG+TGG + chr3.1:87698964-87698983 MS.gene014659:intron 30.0%
AATTAGGGATATTCACAAGT+TGG + chr3.1:87698843-87698862 MS.gene014659:intron 30.0%
ACAAGTTCTTATGAAACTCA+AGG - chr3.1:87699075-87699094 None:intergenic 30.0%
ACGATGTTAATTTATAAGGG+AGG + chr3.1:87698656-87698675 MS.gene014659:intron 30.0%
AGATTTGAATTTGAACGAAC+CGG + chr3.1:87696814-87696833 MS.gene014659:intron 30.0%
AGCTGTCCATTTAAAAATGT+TGG - chr3.1:87696755-87696774 None:intergenic 30.0%
ATACCAAATTAGTTGGAACA+TGG + chr3.1:87697517-87697536 MS.gene014659:intron 30.0%
ATCAATTATGCTCGATAGAA+TGG + chr3.1:87699633-87699652 MS.gene014659:intron 30.0%
CAAGTTCTTATGAAACTCAA+GGG - chr3.1:87699074-87699093 None:intergenic 30.0%
CCGAATTAACATTAACTTAC+TGG - chr3.1:87697718-87697737 None:intergenic 30.0%
CTCTAACTTATCAACATCAT+TGG - chr3.1:87699022-87699041 None:intergenic 30.0%
CTGAAAACTTGTAATCTAGT+TGG + chr3.1:87699897-87699916 MS.gene014659:intron 30.0%
GGTATATTAGATGCTCAATT+TGG - chr3.1:87697502-87697521 None:intergenic 30.0%
GGTTGAATTAAGATTTAGAC+TGG + chr3.1:87698959-87698978 MS.gene014659:intron 30.0%
TAACAATAAGCCAACCAATT+TGG + chr3.1:87697621-87697640 MS.gene014659:intron 30.0%
TAGAGCTATAATTGCATTGA+TGG + chr3.1:87699327-87699346 MS.gene014659:CDS 30.0%
TAGATATCTTGAAAACTGCT+TGG + chr3.1:87699275-87699294 MS.gene014659:CDS 30.0%
TATAACTTCTTTCCATTCCA+TGG - chr3.1:87699439-87699458 None:intergenic 30.0%
TCAATTATGCTCGATAGAAT+GGG + chr3.1:87699634-87699653 MS.gene014659:intron 30.0%
TCATTATAAAATTTCCCAGC+AGG + chr3.1:87699760-87699779 MS.gene014659:intron 30.0%
TGAGTTTCATAAGAACTTGT+TGG + chr3.1:87699075-87699094 MS.gene014659:intron 30.0%
! CTTGTAATAATTTTGCAGAC+CGG + chr3.1:87699241-87699260 MS.gene014659:intron 30.0%
! CTTGTATTTGTTTGTTGGTT+AGG + chr3.1:87696553-87696572 MS.gene014659:intron 30.0%
! TAAATGGACAGCTTTAATCA+AGG + chr3.1:87696762-87696781 MS.gene014659:CDS 30.0%
! TACCTTTTCCATCACAATTA+GGG - chr3.1:87698117-87698136 None:intergenic 30.0%
! TTTTTCTTTCTCTAATGCCA+TGG + chr3.1:87699419-87699438 MS.gene014659:intron 30.0%
!! AAGCAGTTTTCAAGATATCT+AGG - chr3.1:87699276-87699295 None:intergenic 30.0%
!! AATTCAGGTGCTGTATTTTA+AGG + chr3.1:87697749-87697768 MS.gene014659:intron 30.0%
!! ATTCAGGTGCTGTATTTTAA+GGG + chr3.1:87697750-87697769 MS.gene014659:intron 30.0%
!! GTCACCTTTAAAATTAAACG+AGG + chr3.1:87698684-87698703 MS.gene014659:intron 30.0%
!! GTGTTATTTGAAGATATCTC+AGG + chr3.1:87698740-87698759 MS.gene014659:intron 30.0%
!! TAGATTTTGGAAAAGCTACT+TGG - chr3.1:87697921-87697940 None:intergenic 30.0%
!! TCATTCAACTTGTTGAAGTA+TGG + chr3.1:87697667-87697686 MS.gene014659:intron 30.0%
!! TTTGTTTGTGTTTTTAACGC+AGG + chr3.1:87696642-87696661 MS.gene014659:intron 30.0%
!!! CAGACCATAGTTTTAAAAAC+CGG - chr3.1:87698609-87698628 None:intergenic 30.0%
!!! GTTTTTAAAACTATGGTCTG+AGG + chr3.1:87698609-87698628 MS.gene014659:intron 30.0%
!!! TATATTTTGGAATGAGTTGC+GGG - chr3.1:87699836-87699855 None:intergenic 30.0%
!!! TATTTTCATCTTGGTTTGGA+TGG + chr3.1:87697455-87697474 MS.gene014659:intron 30.0%
!!! TGACTTTGCTTTTTTCAGTT+TGG + chr3.1:87697358-87697377 MS.gene014659:intron 30.0%
!!! TTGTTTTGAGTTTGTGGTAT+AGG + chr3.1:87698867-87698886 MS.gene014659:intron 30.0%
AACCTGAATCACAATTCAGT+GGG - chr3.1:87699372-87699391 None:intergenic 35.0%
AATGTTAATTCGGCAACACA+TGG + chr3.1:87697725-87697744 MS.gene014659:intron 35.0%
AATTTCAAATCATCGCAGAC+CGG - chr3.1:87696836-87696855 None:intergenic 35.0%
ACTGAAAAAAGCAAAGTCAC+GGG - chr3.1:87697357-87697376 None:intergenic 35.0%
AGGTAACAGTGTTAAAGTTG+GGG - chr3.1:87697183-87697202 None:intergenic 35.0%
AGTGAAATGTCAAATCCTAG+TGG - chr3.1:87699669-87699688 None:intergenic 35.0%
ATCTGATAGTAACCTACAGA+AGG - chr3.1:87697027-87697046 None:intergenic 35.0%
ATTATTTATTTGGAGGGAGG+AGG - chr3.1:87699463-87699482 None:intergenic 35.0%
CAAGGTAACAGTGTTAAAGT+TGG - chr3.1:87697185-87697204 None:intergenic 35.0%
CATGTTGCATGTGATTAGAT+TGG + chr3.1:87698900-87698919 MS.gene014659:intron 35.0%
CTAATCACATGCAACATGTT+TGG - chr3.1:87698898-87698917 None:intergenic 35.0%
GAACCATCAGTGTGAAATTA+GGG + chr3.1:87698828-87698847 MS.gene014659:intron 35.0%
GAGTTAGGGTTATGCAAAAT+TGG + chr3.1:87696575-87696594 MS.gene014659:intron 35.0%
TAAAGTTCACCCAAATTGGT+TGG - chr3.1:87697634-87697653 None:intergenic 35.0%
TATCCCTAATTTCACACTGA+TGG - chr3.1:87698834-87698853 None:intergenic 35.0%
TCTTATGAAACTCAAGGGTA+CGG - chr3.1:87699069-87699088 None:intergenic 35.0%
TGAACCATCAGTGTGAAATT+AGG + chr3.1:87698827-87698846 MS.gene014659:intron 35.0%
TGTACCTTAAAATGCACGTT+GGG - chr3.1:87696998-87697017 None:intergenic 35.0%
TGTTCACATGAAGAGTGAAT+GGG + chr3.1:87698801-87698820 MS.gene014659:intron 35.0%
TTAGTCAAAAAGCGAACTTG+AGG - chr3.1:87696965-87696984 None:intergenic 35.0%
TTCAACCGTTTGATTCAGAT+TGG - chr3.1:87698946-87698965 None:intergenic 35.0%
TTGCCATGTTCCAACTAATT+TGG - chr3.1:87697523-87697542 None:intergenic 35.0%
TTGTACCTTAAAATGCACGT+TGG - chr3.1:87696999-87697018 None:intergenic 35.0%
TTGTTCACATGAAGAGTGAA+TGG + chr3.1:87698800-87698819 MS.gene014659:intron 35.0%
! AACTGGTTCATATGCATATC+TGG + chr3.1:87698532-87698551 MS.gene014659:intron 35.0%
! AGCAAGCTTAGCATTGAAAT+TGG + chr3.1:87696618-87696637 MS.gene014659:intron 35.0%
! CGATGATTTGAAATTTGCTC+TGG + chr3.1:87696841-87696860 MS.gene014659:intron 35.0%
! CTACCTTTTCCATCACAATT+AGG - chr3.1:87698118-87698137 None:intergenic 35.0%
! GGTCTATTTTCATCTTGGTT+TGG + chr3.1:87697451-87697470 MS.gene014659:intron 35.0%
! TCTTTTTGTCTCTAACAGCA+AGG - chr3.1:87697203-87697222 None:intergenic 35.0%
! TGGTTTTCCCATTATAGAGA+GGG - chr3.1:87699002-87699021 None:intergenic 35.0%
! TGTTTGTTGGTTAGGAGTTA+GGG + chr3.1:87696561-87696580 MS.gene014659:intron 35.0%
! TTGTTTGTTGGTTAGGAGTT+AGG + chr3.1:87696560-87696579 MS.gene014659:intron 35.0%
!! TCTCACTTATTTTCTGTTGG+CGG + chr3.1:87699933-87699952 MS.gene014659:intron 35.0%
!! TTGGTTTTCCCATTATAGAG+AGG - chr3.1:87699003-87699022 None:intergenic 35.0%
!! TTTTAAGGGTCCGTTTGTTT+TGG + chr3.1:87697764-87697783 MS.gene014659:intron 35.0%
!!! AATGGTGTTTTTCTGAAGTC+TGG + chr3.1:87697313-87697332 MS.gene014659:intron 35.0%
!!! ACGTGCATTTTAAGGTACAA+TGG + chr3.1:87696999-87697018 MS.gene014659:intron 35.0%
!!! CATAGTTTTAAAAACCGGAC+AGG - chr3.1:87698604-87698623 None:intergenic 35.0%
!!! CTGTCCGGTTTTTAAAACTA+TGG + chr3.1:87698602-87698621 MS.gene014659:intron 35.0%
!!! TGGTTGGTCTATTTTCATCT+TGG + chr3.1:87697446-87697465 MS.gene014659:intron 35.0%
!!! TTTTGAGTTTGTGGTATAGG+AGG + chr3.1:87698870-87698889 MS.gene014659:intron 35.0%
ACTTTACATCCTTAACCGCT+GGG - chr3.1:87698392-87698411 None:intergenic 40.0%
AGCGTAAAGTTCACCCAAAT+TGG - chr3.1:87697638-87697657 None:intergenic 40.0%
AGTGTCTTTGGCAAACTAGA+GGG - chr3.1:87697154-87697173 None:intergenic 40.0%
ATACAAGGAGCTCAAGTGTA+AGG + chr3.1:87697953-87697972 MS.gene014659:intron 40.0%
ATAGGCGATCAGATTGAAAC+TGG + chr3.1:87699547-87699566 MS.gene014659:intron 40.0%
ATTGTTATCCCGACAACAAG+TGG - chr3.1:87697608-87697627 None:intergenic 40.0%
CAACCTGAATCACAATTCAG+TGG - chr3.1:87699373-87699392 None:intergenic 40.0%
CACGCAGTTAAAGAACAGAA+GGG - chr3.1:87699701-87699720 None:intergenic 40.0%
CCATTATTACCCTCAAGCAT+AGG - chr3.1:87697298-87697317 None:intergenic 40.0%
CCTATGCTTGAGGGTAATAA+TGG + chr3.1:87697295-87697314 MS.gene014659:intron 40.0%
CTGAAAAAAGCAAAGTCACG+GGG - chr3.1:87697356-87697375 None:intergenic 40.0%
CTTGCAGCAATGCCAAAAAA+AGG + chr3.1:87700023-87700042 MS.gene014659:CDS 40.0%
CTTTCTCTAATGCCATGGAA+TGG + chr3.1:87699424-87699443 MS.gene014659:intron 40.0%
GATATCTAGGCAAATCTCTC+CGG - chr3.1:87699263-87699282 None:intergenic 40.0%
GGTAACAGTGTTAAAGTTGG+GGG - chr3.1:87697182-87697201 None:intergenic 40.0%
GGTTGTAAAGGATAATGCTC+AGG - chr3.1:87696941-87696960 None:intergenic 40.0%
GTACCTTAAAATGCACGTTG+GGG - chr3.1:87696997-87697016 None:intergenic 40.0%
TACAAGGAGCTCAAGTGTAA+GGG + chr3.1:87697954-87697973 MS.gene014659:intron 40.0%
TACTTTACATCCTTAACCGC+TGG - chr3.1:87698393-87698412 None:intergenic 40.0%
TAGTGTCTTTGGCAAACTAG+AGG - chr3.1:87697155-87697174 None:intergenic 40.0%
TCAGATTGAAACTGGACTTG+AGG + chr3.1:87699555-87699574 MS.gene014659:intron 40.0%
TCCAGCCAATCTGAATCAAA+CGG + chr3.1:87698938-87698957 MS.gene014659:intron 40.0%
TGGTGTCTCATCTATGAAAC+TGG + chr3.1:87697254-87697273 MS.gene014659:intron 40.0%
TGTCTGTCGTCTTCTTCATT+TGG + chr3.1:87697234-87697253 MS.gene014659:intron 40.0%
TTGACTGCCCTCTCTATAAT+GGG + chr3.1:87698992-87699011 MS.gene014659:intron 40.0%
! AAGATTCCACATTTTCCCAG+CGG + chr3.1:87698374-87698393 MS.gene014659:intron 40.0%
! CACCCTAATTGTGATGGAAA+AGG + chr3.1:87698112-87698131 MS.gene014659:intron 40.0%
! CAGTTGATTTCCAGTTCAAC+CGG - chr3.1:87698517-87698536 None:intergenic 40.0%
! CTTATGAAACTCAAGGGTAC+GGG - chr3.1:87699068-87699087 None:intergenic 40.0%
! GTTTTTAACGCAGGCATCAA+GGG + chr3.1:87696651-87696670 MS.gene014659:intron 40.0%
! TAAATGGCACTGGATCTCTA+AGG - chr3.1:87698439-87698458 None:intergenic 40.0%
! TCGCAAACGAGTTGAATATC+AGG - chr3.1:87696727-87696746 None:intergenic 40.0%
! TTATGAAACTCAAGGGTACG+GGG - chr3.1:87699067-87699086 None:intergenic 40.0%
! TTGAATCAAACCGGTTCAAC+CGG + chr3.1:87698495-87698514 MS.gene014659:intron 40.0%
!! TGTTTTTAACGCAGGCATCA+AGG + chr3.1:87696650-87696669 MS.gene014659:intron 40.0%
!!! GTTGGCTTGTTTTGAGTTTG+TGG + chr3.1:87698861-87698880 MS.gene014659:intron 40.0%
AACAGATTGCAGAGTCCATG+CGG - chr3.1:87699305-87699324 None:intergenic 45.0%
AACAGTGTTAAAGTTGGGGG+AGG - chr3.1:87697179-87697198 None:intergenic 45.0%
ACCGTTTGATTCAGATTGGC+TGG - chr3.1:87698942-87698961 None:intergenic 45.0%
ACTGATATGCCGCACATGAT+TGG + chr3.1:87697544-87697563 MS.gene014659:intron 45.0%
ACTGATATGCTAAGACCTGC+TGG - chr3.1:87699778-87699797 None:intergenic 45.0%
AGCCCACTGAATTGTGATTC+AGG + chr3.1:87699367-87699386 MS.gene014659:CDS 45.0%
CAAACGCACCCTAATTGTGA+TGG + chr3.1:87698106-87698125 MS.gene014659:intron 45.0%
CAGGAACAGAAAATGCAAGC+TGG - chr3.1:87696922-87696941 None:intergenic 45.0%
CCATGGCAAGAATGTACACT+AGG + chr3.1:87700000-87700019 MS.gene014659:CDS 45.0%
CCTAAAGCTCCTATGCTTGA+GGG + chr3.1:87697286-87697305 MS.gene014659:intron 45.0%
CCTAGTGTACATTCTTGCCA+TGG - chr3.1:87700003-87700022 None:intergenic 45.0%
CCTTCAGAGACTCCATATGA+CGG + chr3.1:87696887-87696906 MS.gene014659:CDS 45.0%
CGAACTTGAGGAGGTTGTAA+AGG - chr3.1:87696953-87696972 None:intergenic 45.0%
CGGTTGAACTGGAAATCAAC+TGG + chr3.1:87698515-87698534 MS.gene014659:intron 45.0%
CTACGTTCAGGTGATGTTAG+AGG + chr3.1:87699969-87699988 MS.gene014659:CDS 45.0%
CTCAATACCCCAATCATGTG+CGG - chr3.1:87697556-87697575 None:intergenic 45.0%
CTGATATGCCGCACATGATT+GGG + chr3.1:87697545-87697564 MS.gene014659:intron 45.0%
CTGATATGCTAAGACCTGCT+GGG - chr3.1:87699777-87699796 None:intergenic 45.0%
CTTCAGAGACTCCATATGAC+GGG + chr3.1:87696888-87696907 MS.gene014659:CDS 45.0%
CTTGACTGCCCTCTCTATAA+TGG + chr3.1:87698991-87699010 MS.gene014659:intron 45.0%
GCACGCAGTTAAAGAACAGA+AGG - chr3.1:87699702-87699721 None:intergenic 45.0%
GCAGGTAATCTTCTACGTTC+AGG + chr3.1:87699957-87699976 MS.gene014659:intron 45.0%
GGTACAATGGATCCTTCTGT+AGG + chr3.1:87697012-87697031 MS.gene014659:intron 45.0%
GTCAAAAAGCGAACTTGAGG+AGG - chr3.1:87696962-87696981 None:intergenic 45.0%
GTGTCTTTGGCAAACTAGAG+GGG - chr3.1:87697153-87697172 None:intergenic 45.0%
TATGCTCGATAGAATGGGTG+TGG + chr3.1:87699639-87699658 MS.gene014659:intron 45.0%
TCGGCAACACATGGTAATTC+AGG + chr3.1:87697734-87697753 MS.gene014659:intron 45.0%
TGATATGCCGCACATGATTG+GGG + chr3.1:87697546-87697565 MS.gene014659:intron 45.0%
TGTTAGAGGCTATCAGTCCA+TGG + chr3.1:87699983-87700002 MS.gene014659:CDS 45.0%
TTCAGAGACTCCATATGACG+GGG + chr3.1:87696889-87696908 MS.gene014659:CDS 45.0%
! TCACCCCAACGTGCATTTTA+AGG + chr3.1:87696991-87697010 MS.gene014659:CDS 45.0%
! TTATTTTCTGTTGGCGGTGC+AGG + chr3.1:87699939-87699958 MS.gene014659:intron 45.0%
!! TGGGGTATTGAGCCATTATC+TGG + chr3.1:87697564-87697583 MS.gene014659:intron 45.0%
!! ATCAAATTAAAAATAAATTT+AGG - chr3.1:87698191-87698210 None:intergenic 5.0%
ACAGATTGCAGAGTCCATGC+GGG - chr3.1:87699304-87699323 None:intergenic 50.0%
ATCTGGTCCAACACCGTTAC+TGG + chr3.1:87698549-87698568 MS.gene014659:intron 50.0%
CCCTCAAGCATAGGAGCTTT+AGG - chr3.1:87697289-87697308 None:intergenic 50.0%
CCGACAACAAGTGGCATACA+GGG - chr3.1:87697599-87697618 None:intergenic 50.0%
CCGTCATATGGAGTCTCTGA+AGG - chr3.1:87696890-87696909 None:intergenic 50.0%
CCTTAACCGCTGGGAAAATG+TGG - chr3.1:87698383-87698402 None:intergenic 50.0%
CTGAAGTCTGGTGTGAGTGA+TGG + chr3.1:87697325-87697344 MS.gene014659:intron 50.0%
GCCTAAAGCTCCTATGCTTG+AGG + chr3.1:87697285-87697304 MS.gene014659:intron 50.0%
GGGTGCAGACATCCAGATAA+TGG - chr3.1:87697579-87697598 None:intergenic 50.0%
TCAGAGACTCCATATGACGG+GGG + chr3.1:87696890-87696909 MS.gene014659:CDS 50.0%
TCCAGTTCAACCGGTTGAAC+CGG - chr3.1:87698508-87698527 None:intergenic 50.0%
TGGAAAACACCCCCGTCATA+TGG - chr3.1:87696902-87696921 None:intergenic 50.0%
TGGAATGAGTTGCGGGCTTA+AGG - chr3.1:87699829-87699848 None:intergenic 50.0%
TTGGGGGAGGTTAGTGTCTT+TGG - chr3.1:87697166-87697185 None:intergenic 50.0%
! CCACATTTTCCCAGCGGTTA+AGG + chr3.1:87698380-87698399 MS.gene014659:intron 50.0%
!! CCCTGTATGCCACTTGTTGT+CGG + chr3.1:87697596-87697615 MS.gene014659:intron 50.0%
!! CCTGTATGCCACTTGTTGTC+GGG + chr3.1:87697597-87697616 MS.gene014659:intron 50.0%
!! TCACAATTCAGTGGGCTGTC+AGG - chr3.1:87699364-87699383 None:intergenic 50.0%
AATGGGTGTGGTGGTCCACT+AGG + chr3.1:87699651-87699670 MS.gene014659:intron 55.0%
ATCAAGGGCGAGGCTGTTCA+AGG + chr3.1:87696666-87696685 MS.gene014659:CDS 55.0%
CAGATTGCAGAGTCCATGCG+GGG - chr3.1:87699303-87699322 None:intergenic 55.0%
CCCGACAACAAGTGGCATAC+AGG - chr3.1:87697600-87697619 None:intergenic 55.0%
GCTCGATAGAATGGGTGTGG+TGG + chr3.1:87699642-87699661 MS.gene014659:intron 55.0%
GTCCAACACCGTTACTGGAC+CGG + chr3.1:87698554-87698573 MS.gene014659:intron 55.0%
! AAGGGTACGGGGCGTAATAG+TGG - chr3.1:87699056-87699075 None:intergenic 55.0%
! ACCGGTTCAACCGGTTGAAC+TGG + chr3.1:87698504-87698523 MS.gene014659:intron 55.0%
!! CATGGGTCTGGTTTCGGGTT+CGG + chr3.1:87698578-87698597 MS.gene014659:intron 55.0%
!! TTCAGTGGGCTGTCAGGTTC+TGG - chr3.1:87699358-87699377 None:intergenic 55.0%
AAACTGCTTGGAGCCCCGCA+TGG + chr3.1:87699287-87699306 MS.gene014659:CDS 60.0%
ACCCATGGCCGGTCCAGTAA+CGG - chr3.1:87698565-87698584 None:intergenic 60.0%
ACCGTTACTGGACCGGCCAT+GGG + chr3.1:87698561-87698580 MS.gene014659:intron 60.0%
CGAACCCGAAACCAGACCCA+TGG - chr3.1:87698580-87698599 None:intergenic 60.0%
TAACGCAGGCATCAAGGGCG+AGG + chr3.1:87696656-87696675 MS.gene014659:intron 60.0%
! ACCGGCCATGGGTCTGGTTT+CGG + chr3.1:87698572-87698591 MS.gene014659:intron 60.0%
CACCGTTACTGGACCGGCCA+TGG + chr3.1:87698560-87698579 MS.gene014659:intron 65.0%
CCCGAAACCAGACCCATGGC+CGG - chr3.1:87698576-87698595 None:intergenic 65.0%
GGCCGGTCCAGTAACGGTGT+TGG - chr3.1:87698559-87698578 None:intergenic 65.0%
TACTGGACCGGCCATGGGTC+TGG + chr3.1:87698566-87698585 MS.gene014659:intron 65.0%
! CCGGCCATGGGTCTGGTTTC+GGG + chr3.1:87698573-87698592 MS.gene014659:intron 65.0%
!! GGTTTCGGGTTCGGCCTGTC+CGG + chr3.1:87698587-87698606 MS.gene014659:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 87696505 87700049 87696505 ID=MS.gene014659
chr3.1 mRNA 87696505 87700049 87696505 ID=MS.gene014659.t1;Parent=MS.gene014659
chr3.1 exon 87696505 87696510 87696505 ID=MS.gene014659.t1.exon1;Parent=MS.gene014659.t1
chr3.1 CDS 87696505 87696510 87696505 ID=cds.MS.gene014659.t1;Parent=MS.gene014659.t1
chr3.1 exon 87696664 87696783 87696664 ID=MS.gene014659.t1.exon2;Parent=MS.gene014659.t1
chr3.1 CDS 87696664 87696783 87696664 ID=cds.MS.gene014659.t1;Parent=MS.gene014659.t1
chr3.1 exon 87696884 87697012 87696884 ID=MS.gene014659.t1.exon3;Parent=MS.gene014659.t1
chr3.1 CDS 87696884 87697012 87696884 ID=cds.MS.gene014659.t1;Parent=MS.gene014659.t1
chr3.1 exon 87699259 87699388 87699259 ID=MS.gene014659.t1.exon4;Parent=MS.gene014659.t1
chr3.1 CDS 87699259 87699388 87699259 ID=cds.MS.gene014659.t1;Parent=MS.gene014659.t1
chr3.1 exon 87699961 87700049 87699961 ID=MS.gene014659.t1.exon5;Parent=MS.gene014659.t1
chr3.1 CDS 87699961 87700049 87699961 ID=cds.MS.gene014659.t1;Parent=MS.gene014659.t1
Gene Sequence

>MS.gene014659

ATGCAGGTTCGTTCGTTAATGGATTCAATTCTTAGTGTCTTTAATTAACTTGTATTTGTTTGTTGGTTAGGAGTTAGGGTTATGCAAAATTGGATTTGTGTTATTGTAATTGTAGCAAGCTTAGCATTGAAATTGGATTTGTTTGTGTTTTTAACGCAGGCATCAAGGGCGAGGCTGTTCAAGGAGTACAAAGAAGTGCAACGAGAGAAGACAGCTGATCCTGATATTCAACTCGTTTGCGATGATTCCAACATTTTTAAATGGACAGCTTTAATCAAGGTATAGTAGCTAATAATCTCGAATTTTAAAAGATTTGAATTTGAACGAACCGGTCTGCGATGATTTGAAATTTGCTCTGGTTTATTTTGTTCAATATTAGGGACCTTCAGAGACTCCATATGACGGGGGTGTTTTCCAGCTTGCATTTTCTGTTCCTGAGCATTATCCTTTACAACCTCCTCAAGTTCGCTTTTTGACTAAAATATTTCACCCCAACGTGCATTTTAAGGTACAATGGATCCTTCTGTAGGTTACTATCAGATTGTTGTTTGATGATGATTTTCACTTTTAGAACACAATTGTATGATAAAAATAGGGTAAATTGCATTACATTCCCCTGAGATATGTTAAAATGTTACACATACACCCCTCTAGTTTGCCAAAGACACTAACCTCCCCCAACTTTAACACTGTTACCTTGCTGTTAGAGACAAAAAGAGAAAAAGTTTTTGTCTGTCGTCTTCTTCATTTGGTGTCTCATCTATGAAACTGGCTTTCTCAGCCTAAAGCTCCTATGCTTGAGGGTAATAATGGTGTTTTTCTGAAGTCTGGTGTGAGTGATGGATACACCCCGTGACTTTGCTTTTTTCAGTTTGGTGTTTGACTTCATATATTTTGTCTACAAAATCAAAAACACGATGACAATAGCTAATATATCAAATTGGTTGGTCTATTTTCATCTTGGTTTGGATGGTAAAACTTAATTATCTCTATGCCAAATTGAGCATCTAATATACCAAATTAGTTGGAACATGGCAACACTGATATGCCGCACATGATTGGGGTATTGAGCCATTATCTGGATGTCTGCACCCTGTATGCCACTTGTTGTCGGGATAACAATAAGCCAACCAATTTGGGTGAACTTTACGCTCTGTCAATTTCATTCAACTTGTTGAAGTATGGATTTTAATTAGGAAAATAAAATGTACCAGTAAGTTAATGTTAATTCGGCAACACATGGTAATTCAGGTGCTGTATTTTAAGGGTCCGTTTGTTTTGGATTTTTTTGAAAAAAAATCTATTTTTTTAACTAAAAAATCACTTTTTTTGTTTTTGTAGTGTTTGTTTTAGATTTTGAAAAAATCCATTTTGTTAAAAAAATCATTTTTAGGCTCAAAATGAAAATCTATTCCAAGTAGCTTTTCCAAAATCTATTTTTTTTCTAAATACAAGGAGCTCAAGTGTAAGGGTTTCAAATCTTCAAAAAATGATTTTTAGGATAGTAAACAAACACAAATAGAATAGATTTTTTTAAAAATCTCTACAAAAAAAATCTCTAGATTCTTTTACCTCAAAATCTATTTTTTTTAAAGCTGAAACAAACGCACCCTAATTGTGATGGAAAAGGTAGATTTATATTAAAATATAAATCGTTACAAATTTATACTTATAAATACATATCCTAAATTTATTTTTAATTTGATAAGTCTTGAAAGTTTAAGTTATAACAATTTAGTTTATAGAAGTTAAATGTTAGTATATACTTTTTTTTGAAAAAAGTAGTAACATACGTATTAAAGCAAGTAATCTAACACAAGAAAACTAGTAACATATATATATTTTAACAAGTAGAAGTGATAATTTTGCAAGATTCCACATTTTCCCAGCGGTTAAGGATGTAAAGTAGTACAAGTGTCTCAAGTTCTACTCCTTAGAGATCCAGTGCCATTTATTTAATTTTTGATGTAACTACAAACCAGTTTAACTTTTGAATCAAACCGGTTCAACCGGTTGAACTGGAAATCAACTGGTTCATATGCATATCTGGTCCAACACCGTTACTGGACCGGCCATGGGTCTGGTTTCGGGTTCGGCCTGTCCGGTTTTTAAAACTATGGTCTGAGGAATTTTTGTTTTAATGGATGGCAAACGATGTTAATTTATAAGGGAGGCAACTGTCACCTTTAAAATTAAACGAGGATAGAGCTTGATTTAAAAATAGAGGGGATGTTTGTGTTATTTGAAGATATCTCAGGGAAGTCATTGTAATTTGCACTTAAAAATATCTAGTAGTTGTTCACATGAAGAGTGAATGGGATCTGAACCATCAGTGTGAAATTAGGGATATTCACAAGTTGGCTTGTTTTGAGTTTGTGGTATAGGAGGATCCAAACATGTTGCATGTGATTAGATTGGTTTTAATATTTTTTCTCCAGCCAATCTGAATCAAACGGTTGAATTAAGATTTAGACTGGTGTGGTTGTCTTGACTGCCCTCTCTATAATGGGAAAACCAATGATGTTGATAAGTTAGAGACTAGTAATTTCCACTATTACGCCCCGTACCCTTGAGTTTCATAAGAACTTGTTGGAAATTGACAACAATATTGATTTGAAGTTGAATTCCTAGTCAATTATTTTTGCTTTCCTTTTGTTGTTTATAAATTTGATAGATAACTTCATTTATTCAATTGGATTTGTTTTTCTTGACATTTTTTCATGAATACTTTTTAATCTTGTAATAATTTTGCAGACCGGAGAGATTTGCCTAGATATCTTGAAAACTGCTTGGAGCCCCGCATGGACTCTGCAATCTGTTTGTAGAGCTATAATTGCATTGATGGCTCATCCAGAACCTGACAGCCCACTGAATTGTGATTCAGGTTGTTAAACTTTCTCTGTTCCATATCATTTTTTTCTTTCTCTAATGCCATGGAATGGAAAGAAGTTATATCCTCCTCCCTCCAAATAAATAATAAAACTGCTAGAAAAAGAAACTTGTATTCAGATATGGATCCCATGTAGTATAGCTTTATTGATTATAGGCGATCAGATTGAAACTGGACTTGAGGATTTAGAAACTGCAAAAGATTTGCCAATTAACTATTTTTAAACATCATCATGCTTATCAATTATGCTCGATAGAATGGGTGTGGTGGTCCACTAGGATTTGACATTTCACTTAATGATGGCCCTTCTGTTCTTTAACTGCGTGCTATTTGAATTTATATGCATGCTTCCAGATTTTCGTTGTTCATTATAAAATTTCCCAGCAGGTCTTAGCATATCAGTATTTTTTGGAAGATAAAGGACTTCAAATCCTTAAGCCCGCAACTCATTCCAAAATATATACACCTTATTTTCTTTGTACTGAAACAAAAATAATGTGAACTGAAAACTTGTAATCTAGTTGGAAAGAATGTCATTTCTCACTTATTTTCTGTTGGCGGTGCAGGTAATCTTCTACGTTCAGGTGATGTTAGAGGCTATCAGTCCATGGCAAGAATGTACACTAGGCTTGCAGCAATGCCAAAAAAAGGCTGA
Protein sequence

>MS.gene014659.t1

MQASRARLFKEYKEVQREKTADPDIQLVCDDSNIFKWTALIKGPSETPYDGGVFQLAFSVPEHYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKTAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG