Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75306.t1 | XP_013461998.1 | 99.4 | 157 | 1 | 0 | 1 | 157 | 1 | 157 | 1.20E-86 | 328.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75306.t1 | Q8LGF7 | 94.3 | 157 | 9 | 0 | 1 | 157 | 1 | 157 | 5.9e-85 | 314.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75306.t1 | G7ZWG0 | 99.4 | 157 | 1 | 0 | 1 | 157 | 1 | 157 | 9.0e-87 | 328.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene75306 | MS.gene08926 | PPI |
MS.gene75306 | MS.gene052128 | PPI |
MS.gene75306 | MS.gene52445 | PPI |
MS.gene75306 | MS.gene060634 | PPI |
MS.gene75306 | MS.gene051559 | PPI |
MS.gene75306 | MS.gene33044 | PPI |
MS.gene75306 | MS.gene009653 | PPI |
MS.gene75306 | MS.gene05127 | PPI |
MS.gene75306 | MS.gene041043 | PPI |
MS.gene75306 | MS.gene53889 | PPI |
MS.gene75306 | MS.gene31164 | PPI |
MS.gene75306 | MS.gene99771 | PPI |
MS.gene75306 | MS.gene08774 | PPI |
MS.gene75306 | MS.gene30950 | PPI |
MS.gene033148 | MS.gene75306 | PPI |
MS.gene75306 | MS.gene98045 | PPI |
MS.gene75306 | MS.gene017247 | PPI |
MS.gene75306 | MS.gene059660 | PPI |
MS.gene90484 | MS.gene75306 | PPI |
MS.gene75306 | MS.gene023529 | PPI |
MS.gene75306 | MS.gene049883 | PPI |
MS.gene75306 | MS.gene67704 | PPI |
MS.gene75306 | MS.gene049594 | PPI |
MS.gene75306 | MS.gene56807 | PPI |
MS.gene75306 | MS.gene58462 | PPI |
MS.gene75306 | MS.gene060137 | PPI |
MS.gene75306 | MS.gene58463 | PPI |
MS.gene40572 | MS.gene75306 | PPI |
MS.gene015187 | MS.gene75306 | PPI |
MS.gene75306 | MS.gene011789 | PPI |
MS.gene75306 | MS.gene26246 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75306.t1 | MTR_3g110110 | 99.363 | 157 | 1 | 0 | 1 | 157 | 1 | 157 | 2.88e-118 | 330 |
MS.gene75306.t1 | MTR_4g073240 | 42.177 | 147 | 81 | 3 | 7 | 153 | 5 | 147 | 3.99e-35 | 119 |
MS.gene75306.t1 | MTR_8g071040 | 42.177 | 147 | 81 | 3 | 7 | 153 | 5 | 147 | 5.58e-35 | 119 |
MS.gene75306.t1 | MTR_5g075580 | 40.816 | 147 | 83 | 3 | 7 | 153 | 5 | 147 | 1.17e-34 | 118 |
MS.gene75306.t1 | MTR_1g021150 | 41.497 | 147 | 82 | 3 | 7 | 153 | 5 | 147 | 1.21e-34 | 118 |
MS.gene75306.t1 | MTR_3g062450 | 40.816 | 147 | 83 | 3 | 7 | 153 | 5 | 147 | 1.36e-34 | 118 |
MS.gene75306.t1 | MTR_7g116940 | 40.816 | 147 | 83 | 3 | 7 | 153 | 5 | 147 | 3.39e-34 | 117 |
MS.gene75306.t1 | MTR_4g108080 | 38.732 | 142 | 83 | 3 | 4 | 145 | 5 | 142 | 9.79e-34 | 116 |
MS.gene75306.t1 | MTR_2g078010 | 40.411 | 146 | 83 | 3 | 7 | 152 | 9 | 150 | 1.57e-33 | 115 |
MS.gene75306.t1 | MTR_8g468530 | 38.732 | 142 | 83 | 3 | 4 | 145 | 21 | 158 | 1.60e-33 | 116 |
MS.gene75306.t1 | MTR_7g116940 | 39.610 | 154 | 82 | 4 | 7 | 153 | 5 | 154 | 1.03e-32 | 114 |
MS.gene75306.t1 | MTR_3g098780 | 42.373 | 118 | 67 | 1 | 6 | 123 | 5 | 121 | 3.05e-32 | 114 |
MS.gene75306.t1 | MTR_4g073240 | 45.000 | 120 | 64 | 2 | 34 | 153 | 1 | 118 | 3.34e-32 | 111 |
MS.gene75306.t1 | MTR_1g021150 | 44.628 | 121 | 65 | 2 | 33 | 153 | 37 | 155 | 5.06e-32 | 112 |
MS.gene75306.t1 | MTR_2g078010 | 39.706 | 136 | 79 | 2 | 7 | 142 | 9 | 141 | 5.30e-32 | 112 |
MS.gene75306.t1 | MTR_3g098780 | 42.373 | 118 | 67 | 1 | 6 | 123 | 29 | 145 | 6.40e-32 | 113 |
MS.gene75306.t1 | MTR_5g075580 | 44.167 | 120 | 65 | 2 | 34 | 153 | 1 | 118 | 7.32e-32 | 110 |
MS.gene75306.t1 | MTR_2g078010 | 36.875 | 160 | 83 | 4 | 7 | 152 | 9 | 164 | 1.61e-29 | 106 |
MS.gene75306.t1 | MTR_4g108080 | 41.667 | 108 | 60 | 2 | 4 | 111 | 5 | 109 | 8.91e-28 | 100 |
MS.gene75306.t1 | MTR_2g078010 | 44.118 | 102 | 54 | 2 | 7 | 108 | 9 | 107 | 6.41e-26 | 95.1 |
MS.gene75306.t1 | MTR_7g116940 | 43.519 | 108 | 58 | 2 | 7 | 114 | 5 | 109 | 1.08e-25 | 95.1 |
MS.gene75306.t1 | MTR_7g087590 | 36.913 | 149 | 90 | 3 | 7 | 155 | 14 | 158 | 1.54e-25 | 98.6 |
MS.gene75306.t1 | MTR_4g108080 | 39.815 | 108 | 63 | 2 | 38 | 145 | 37 | 142 | 2.79e-25 | 94.7 |
MS.gene75306.t1 | MTR_1g095510 | 41.905 | 105 | 60 | 1 | 21 | 125 | 4 | 107 | 1.71e-24 | 92.4 |
MS.gene75306.t1 | MTR_1g095510 | 41.905 | 105 | 60 | 1 | 21 | 125 | 58 | 161 | 2.76e-24 | 93.6 |
MS.gene75306.t1 | MTR_4g063490 | 33.613 | 119 | 65 | 2 | 28 | 133 | 28 | 145 | 4.59e-23 | 89.7 |
MS.gene75306.t1 | MTR_4g076200 | 36.607 | 112 | 70 | 1 | 20 | 131 | 6 | 116 | 1.02e-22 | 87.8 |
MS.gene75306.t1 | MTR_8g028920 | 31.618 | 136 | 89 | 3 | 21 | 155 | 18 | 150 | 1.46e-22 | 89.0 |
MS.gene75306.t1 | MTR_2g096690 | 34.454 | 119 | 64 | 2 | 28 | 133 | 28 | 145 | 2.40e-22 | 87.8 |
MS.gene75306.t1 | MTR_4g076200 | 39.216 | 102 | 61 | 1 | 30 | 131 | 57 | 157 | 3.44e-22 | 87.8 |
MS.gene75306.t1 | MTR_2g096690 | 34.783 | 115 | 61 | 2 | 28 | 129 | 28 | 141 | 4.55e-22 | 87.0 |
MS.gene75306.t1 | MTR_5g009020 | 36.607 | 112 | 70 | 1 | 20 | 131 | 47 | 157 | 5.21e-22 | 87.0 |
MS.gene75306.t1 | MTR_1g095510 | 41.053 | 95 | 55 | 1 | 21 | 115 | 58 | 151 | 5.61e-21 | 84.3 |
MS.gene75306.t1 | MTR_4g106690 | 29.630 | 135 | 91 | 3 | 14 | 147 | 11 | 142 | 7.61e-21 | 84.3 |
MS.gene75306.t1 | MTR_8g085690 | 37.500 | 120 | 72 | 2 | 1 | 120 | 20 | 136 | 1.77e-20 | 82.8 |
MS.gene75306.t1 | MTR_8g098595 | 32.456 | 114 | 75 | 2 | 43 | 155 | 23 | 135 | 5.97e-20 | 81.6 |
MS.gene75306.t1 | MTR_8g028920 | 33.945 | 109 | 70 | 2 | 48 | 155 | 4 | 111 | 2.53e-19 | 79.3 |
MS.gene75306.t1 | MTR_5g019480 | 30.827 | 133 | 88 | 3 | 3 | 135 | 29 | 157 | 3.75e-18 | 77.4 |
MS.gene75306.t1 | MTR_5g019480 | 30.827 | 133 | 88 | 3 | 3 | 135 | 32 | 160 | 3.90e-18 | 77.4 |
MS.gene75306.t1 | MTR_4g073240 | 45.238 | 84 | 44 | 2 | 70 | 153 | 4 | 85 | 7.72e-18 | 73.9 |
MS.gene75306.t1 | MTR_5g019480 | 31.532 | 111 | 74 | 2 | 25 | 135 | 1 | 109 | 8.14e-17 | 72.4 |
MS.gene75306.t1 | MTR_2g096690 | 44.776 | 67 | 36 | 1 | 28 | 94 | 28 | 93 | 2.57e-16 | 70.9 |
MS.gene75306.t1 | MTR_4g094872 | 30.719 | 153 | 95 | 6 | 4 | 149 | 5 | 153 | 2.63e-16 | 72.0 |
MS.gene75306.t1 | MTR_4g121960 | 34.513 | 113 | 64 | 4 | 7 | 115 | 14 | 120 | 1.11e-15 | 72.8 |
MS.gene75306.t1 | MTR_8g076490 | 37.864 | 103 | 59 | 3 | 7 | 108 | 19 | 117 | 1.04e-14 | 67.8 |
MS.gene75306.t1 | MTR_5g016630 | 29.496 | 139 | 82 | 4 | 4 | 132 | 5 | 137 | 1.25e-14 | 67.4 |
MS.gene75306.t1 | MTR_5g021260 | 41.558 | 77 | 43 | 2 | 33 | 108 | 42 | 117 | 2.79e-14 | 66.6 |
MS.gene75306.t1 | MTR_8g023380 | 28.800 | 125 | 79 | 4 | 2 | 122 | 4 | 122 | 2.14e-11 | 60.1 |
MS.gene75306.t1 | MTR_1g073600 | 33.333 | 66 | 44 | 0 | 39 | 104 | 27 | 92 | 5.29e-11 | 57.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75306.t1 | AT5G25760 | 94.268 | 157 | 9 | 0 | 1 | 157 | 1 | 157 | 1.16e-112 | 316 |
MS.gene75306.t1 | AT5G25760 | 94.268 | 157 | 9 | 0 | 1 | 157 | 1 | 157 | 1.16e-112 | 316 |
MS.gene75306.t1 | AT5G53300 | 42.857 | 147 | 80 | 3 | 7 | 153 | 5 | 147 | 4.30e-36 | 122 |
MS.gene75306.t1 | AT5G53300 | 42.857 | 147 | 80 | 3 | 7 | 153 | 5 | 147 | 4.30e-36 | 122 |
MS.gene75306.t1 | AT5G53300 | 42.857 | 147 | 80 | 3 | 7 | 153 | 5 | 147 | 4.30e-36 | 122 |
MS.gene75306.t1 | AT4G27960 | 42.177 | 147 | 81 | 3 | 7 | 153 | 5 | 147 | 6.29e-36 | 122 |
MS.gene75306.t1 | AT1G64230 | 42.857 | 147 | 80 | 3 | 7 | 153 | 5 | 147 | 1.10e-35 | 121 |
MS.gene75306.t1 | AT1G64230 | 42.857 | 147 | 80 | 3 | 7 | 153 | 5 | 147 | 1.10e-35 | 121 |
MS.gene75306.t1 | AT4G27960 | 40.523 | 153 | 87 | 3 | 1 | 153 | 29 | 177 | 1.10e-35 | 122 |
MS.gene75306.t1 | AT3G08690 | 41.497 | 147 | 82 | 3 | 7 | 153 | 5 | 147 | 1.93e-35 | 120 |
MS.gene75306.t1 | AT3G08690 | 41.497 | 147 | 82 | 3 | 7 | 153 | 5 | 147 | 1.93e-35 | 120 |
MS.gene75306.t1 | AT2G16740 | 42.282 | 149 | 78 | 4 | 7 | 153 | 5 | 147 | 1.97e-35 | 120 |
MS.gene75306.t1 | AT5G41700 | 41.497 | 147 | 82 | 3 | 7 | 153 | 5 | 147 | 4.65e-35 | 119 |
MS.gene75306.t1 | AT5G41700 | 41.497 | 147 | 82 | 3 | 7 | 153 | 5 | 147 | 4.65e-35 | 119 |
MS.gene75306.t1 | AT5G41700 | 41.497 | 147 | 82 | 3 | 7 | 153 | 5 | 147 | 4.65e-35 | 119 |
MS.gene75306.t1 | AT1G16890 | 41.096 | 146 | 82 | 3 | 7 | 152 | 9 | 150 | 4.57e-34 | 117 |
MS.gene75306.t1 | AT1G64230 | 40.260 | 154 | 83 | 4 | 7 | 153 | 5 | 156 | 7.10e-34 | 117 |
MS.gene75306.t1 | AT5G41700 | 40.667 | 150 | 80 | 4 | 7 | 153 | 5 | 148 | 7.74e-34 | 116 |
MS.gene75306.t1 | AT1G14400 | 38.356 | 146 | 79 | 3 | 4 | 149 | 5 | 139 | 9.20e-34 | 116 |
MS.gene75306.t1 | AT1G14400 | 38.356 | 146 | 79 | 3 | 4 | 149 | 5 | 139 | 9.20e-34 | 116 |
MS.gene75306.t1 | AT1G78870 | 41.096 | 146 | 82 | 3 | 7 | 152 | 9 | 150 | 1.38e-33 | 116 |
MS.gene75306.t1 | AT2G02760 | 38.732 | 142 | 83 | 3 | 4 | 145 | 5 | 142 | 1.41e-33 | 116 |
MS.gene75306.t1 | AT2G02760 | 38.732 | 142 | 83 | 3 | 4 | 145 | 5 | 142 | 1.41e-33 | 116 |
MS.gene75306.t1 | AT2G02760 | 38.732 | 142 | 83 | 3 | 4 | 145 | 5 | 142 | 1.41e-33 | 116 |
MS.gene75306.t1 | AT2G02760 | 38.732 | 142 | 83 | 3 | 4 | 145 | 5 | 142 | 1.41e-33 | 116 |
MS.gene75306.t1 | AT1G16890 | 43.077 | 130 | 72 | 2 | 23 | 152 | 32 | 159 | 4.59e-33 | 115 |
MS.gene75306.t1 | AT5G56150 | 39.456 | 147 | 85 | 3 | 7 | 153 | 5 | 147 | 4.83e-33 | 114 |
MS.gene75306.t1 | AT5G62540 | 40.580 | 138 | 78 | 3 | 4 | 141 | 5 | 138 | 8.15e-33 | 114 |
MS.gene75306.t1 | AT1G64230 | 46.281 | 121 | 63 | 2 | 33 | 153 | 71 | 189 | 2.47e-32 | 114 |
MS.gene75306.t1 | AT1G64230 | 46.281 | 121 | 63 | 2 | 33 | 153 | 71 | 189 | 2.47e-32 | 114 |
MS.gene75306.t1 | AT1G16890 | 45.690 | 116 | 61 | 2 | 37 | 152 | 4 | 117 | 3.81e-32 | 111 |
MS.gene75306.t1 | AT3G08700 | 40.136 | 147 | 85 | 3 | 7 | 153 | 5 | 148 | 4.04e-32 | 112 |
MS.gene75306.t1 | AT3G08700 | 40.136 | 147 | 85 | 3 | 7 | 153 | 5 | 148 | 4.04e-32 | 112 |
MS.gene75306.t1 | AT1G78870 | 45.690 | 116 | 61 | 2 | 37 | 152 | 4 | 117 | 8.99e-32 | 110 |
MS.gene75306.t1 | AT5G50870 | 37.333 | 150 | 86 | 3 | 6 | 152 | 5 | 149 | 1.08e-30 | 110 |
MS.gene75306.t1 | AT5G50870 | 41.525 | 118 | 68 | 1 | 6 | 123 | 5 | 121 | 1.93e-30 | 109 |
MS.gene75306.t1 | AT1G78870 | 45.299 | 117 | 61 | 3 | 37 | 152 | 4 | 118 | 5.59e-30 | 105 |
MS.gene75306.t1 | AT1G36340 | 40.336 | 119 | 69 | 2 | 30 | 148 | 32 | 148 | 1.76e-28 | 103 |
MS.gene75306.t1 | AT1G36340 | 40.336 | 119 | 69 | 2 | 30 | 148 | 32 | 148 | 1.76e-28 | 103 |
MS.gene75306.t1 | AT5G53300 | 47.525 | 101 | 50 | 2 | 7 | 107 | 5 | 102 | 7.09e-27 | 97.8 |
MS.gene75306.t1 | AT5G05080 | 37.500 | 144 | 87 | 3 | 13 | 155 | 17 | 158 | 8.58e-27 | 101 |
MS.gene75306.t1 | AT5G05080 | 37.500 | 144 | 87 | 3 | 13 | 155 | 17 | 158 | 8.58e-27 | 101 |
MS.gene75306.t1 | AT5G05080 | 37.500 | 144 | 87 | 3 | 13 | 155 | 17 | 158 | 8.58e-27 | 101 |
MS.gene75306.t1 | AT5G05080 | 37.500 | 144 | 87 | 3 | 13 | 155 | 17 | 158 | 8.58e-27 | 101 |
MS.gene75306.t1 | AT5G41700 | 46.535 | 101 | 51 | 2 | 7 | 107 | 5 | 102 | 9.27e-27 | 98.6 |
MS.gene75306.t1 | AT1G78870 | 45.098 | 102 | 53 | 2 | 7 | 108 | 9 | 107 | 1.67e-26 | 97.1 |
MS.gene75306.t1 | AT5G56150 | 42.718 | 103 | 56 | 2 | 7 | 109 | 5 | 104 | 8.97e-25 | 92.4 |
MS.gene75306.t1 | AT3G13550 | 39.024 | 123 | 72 | 2 | 1 | 123 | 34 | 153 | 4.83e-24 | 92.4 |
MS.gene75306.t1 | AT3G55380 | 30.935 | 139 | 82 | 2 | 28 | 153 | 29 | 166 | 1.30e-23 | 90.9 |
MS.gene75306.t1 | AT3G13550 | 38.333 | 120 | 71 | 2 | 1 | 120 | 34 | 150 | 2.94e-23 | 90.1 |
MS.gene75306.t1 | AT2G46030 | 33.577 | 137 | 87 | 3 | 21 | 156 | 18 | 151 | 3.00e-23 | 90.5 |
MS.gene75306.t1 | AT2G46030 | 33.577 | 137 | 87 | 3 | 21 | 156 | 18 | 151 | 3.00e-23 | 90.5 |
MS.gene75306.t1 | AT2G46030 | 33.577 | 137 | 87 | 3 | 21 | 156 | 21 | 154 | 3.28e-23 | 90.5 |
MS.gene75306.t1 | AT2G46030 | 33.577 | 137 | 87 | 3 | 21 | 156 | 21 | 154 | 3.28e-23 | 90.5 |
MS.gene75306.t1 | AT3G20060 | 37.838 | 111 | 68 | 1 | 21 | 131 | 7 | 116 | 5.37e-23 | 88.6 |
MS.gene75306.t1 | AT2G46030 | 33.577 | 137 | 87 | 3 | 21 | 156 | 90 | 223 | 6.96e-23 | 91.3 |
MS.gene75306.t1 | AT3G20060 | 37.838 | 111 | 68 | 1 | 21 | 131 | 52 | 161 | 8.81e-23 | 89.4 |
MS.gene75306.t1 | AT3G46460 | 35.294 | 119 | 63 | 2 | 28 | 133 | 28 | 145 | 4.94e-22 | 87.0 |
MS.gene75306.t1 | AT5G41340 | 30.137 | 146 | 100 | 2 | 13 | 157 | 8 | 152 | 6.43e-22 | 87.0 |
MS.gene75306.t1 | AT5G59300 | 33.613 | 119 | 65 | 2 | 28 | 133 | 28 | 145 | 6.53e-22 | 86.7 |
MS.gene75306.t1 | AT1G63800 | 34.483 | 116 | 74 | 2 | 41 | 155 | 21 | 135 | 8.43e-22 | 86.7 |
MS.gene75306.t1 | AT1G50490 | 39.216 | 102 | 61 | 1 | 30 | 131 | 60 | 160 | 8.97e-22 | 86.7 |
MS.gene75306.t1 | AT1G63800 | 35.088 | 114 | 72 | 2 | 43 | 155 | 38 | 150 | 1.23e-21 | 86.3 |
MS.gene75306.t1 | AT3G24515 | 44.086 | 93 | 47 | 2 | 39 | 127 | 49 | 140 | 1.80e-21 | 89.7 |
MS.gene75306.t1 | AT3G24515 | 41.121 | 107 | 55 | 3 | 25 | 127 | 63 | 165 | 4.93e-21 | 88.6 |
MS.gene75306.t1 | AT5G41340 | 35.455 | 110 | 69 | 2 | 49 | 157 | 9 | 117 | 4.21e-20 | 81.6 |
MS.gene75306.t1 | AT2G32790 | 34.899 | 149 | 90 | 5 | 2 | 148 | 28 | 171 | 4.29e-18 | 77.0 |
MS.gene75306.t1 | AT3G55380 | 25.434 | 173 | 81 | 3 | 28 | 153 | 29 | 200 | 6.96e-17 | 74.3 |
MS.gene75306.t1 | AT2G18600 | 30.534 | 131 | 87 | 3 | 3 | 133 | 31 | 157 | 9.78e-17 | 73.6 |
MS.gene75306.t1 | AT2G18600 | 30.534 | 131 | 87 | 3 | 3 | 133 | 31 | 157 | 9.78e-17 | 73.6 |
MS.gene75306.t1 | AT4G36800 | 29.771 | 131 | 88 | 3 | 3 | 133 | 30 | 156 | 4.03e-16 | 72.0 |
MS.gene75306.t1 | AT4G36800 | 29.771 | 131 | 88 | 3 | 3 | 133 | 30 | 156 | 4.03e-16 | 72.0 |
MS.gene75306.t1 | AT1G45050 | 40.000 | 110 | 47 | 4 | 7 | 108 | 19 | 117 | 4.83e-16 | 71.2 |
MS.gene75306.t1 | AT3G57870 | 35.294 | 102 | 63 | 2 | 33 | 132 | 38 | 138 | 3.05e-15 | 69.3 |
MS.gene75306.t1 | AT3G17000 | 34.959 | 123 | 62 | 6 | 7 | 123 | 15 | 125 | 3.65e-15 | 71.2 |
MS.gene75306.t1 | AT1G75440 | 42.857 | 77 | 42 | 2 | 33 | 108 | 42 | 117 | 8.33e-15 | 68.2 |
MS.gene75306.t1 | AT3G46460 | 32.990 | 97 | 51 | 2 | 50 | 133 | 8 | 103 | 8.09e-14 | 64.7 |
MS.gene75306.t1 | AT3G46460 | 32.990 | 97 | 51 | 2 | 50 | 133 | 8 | 103 | 8.09e-14 | 64.7 |
MS.gene75306.t1 | AT5G42990 | 41.558 | 77 | 43 | 2 | 33 | 108 | 42 | 117 | 8.22e-14 | 65.5 |
MS.gene75306.t1 | AT4G36410 | 37.864 | 103 | 59 | 3 | 7 | 108 | 19 | 117 | 1.24e-13 | 65.1 |
Find 31 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGAGCTATAATTGCATTGA+TGG | 0.267079 | 3.3:+90406513 | MS.gene75306:CDS |
TTCAGTGGGCTGTCAGGTTC+TGG | 0.292721 | 3.3:-90406541 | None:intergenic |
CTACGTTCAGGTGATGTTAG+AGG | 0.363620 | 3.3:+90407155 | MS.gene75306:CDS |
CGTACCTTAAAATGCACGTT+GGG | 0.401640 | 3.3:-90404507 | None:intergenic |
TCGCAAACGAGTTGAATATC+AGG | 0.409108 | 3.3:-90404236 | None:intergenic |
TCACAATTCAGTGGGCTGTC+AGG | 0.446936 | 3.3:-90406547 | None:intergenic |
AGCCCACTGAATTGTGATTC+AGG | 0.455844 | 3.3:+90406553 | MS.gene75306:CDS |
GCAGGTAATCTTCTACGTTC+AGG | 0.470047 | 3.3:+90407143 | MS.gene75306:intron |
TAAATGGACAGCTTTAATCA+AGG | 0.484965 | 3.3:+90404274 | MS.gene75306:CDS |
CGAACTTGAGGAGGTTGTAA+AGG | 0.493381 | 3.3:-90404462 | None:intergenic |
GATATCTAGGCAAATCTCTC+CGG | 0.497339 | 3.3:-90406446 | None:intergenic |
GGTTGTAAAGGATAATGCTC+TGG | 0.511645 | 3.3:-90404450 | None:intergenic |
TAGATATCTTGAAAACTGCT+TGG | 0.517403 | 3.3:+90406461 | MS.gene75306:CDS |
TAACGCAGGCATCAAGGGCG+AGG | 0.520499 | 3.3:+90404168 | MS.gene75306:intron |
CTGGAACAGAAAATGCAAGC+TGG | 0.542398 | 3.3:-90404431 | None:intergenic |
ACAGATTGCAGAGTCCATGC+GGG | 0.543633 | 3.3:-90406487 | None:intergenic |
CTTCAGAGACTCCATATGAC+GGG | 0.544665 | 3.3:+90404400 | MS.gene75306:CDS |
CCATGGCAAGAATGTACACT+AGG | 0.549301 | 3.3:+90407186 | MS.gene75306:CDS |
AAACTGCTTGGAGCCCCGCA+TGG | 0.558893 | 3.3:+90406473 | MS.gene75306:CDS |
CCTAGTGTACATTCTTGCCA+TGG | 0.608526 | 3.3:-90407186 | None:intergenic |
CCGTCATATGGAGTCTCTGA+AGG | 0.612997 | 3.3:-90404399 | None:intergenic |
AACCTGAATCACAATTCAGT+GGG | 0.616964 | 3.3:-90406555 | None:intergenic |
CAACCTGAATCACAATTCAG+TGG | 0.619957 | 3.3:-90406556 | None:intergenic |
TGTTAGAGGCTATCAGTCCA+TGG | 0.632305 | 3.3:+90407169 | MS.gene75306:CDS |
AACAGATTGCAGAGTCCATG+CGG | 0.633452 | 3.3:-90406488 | None:intergenic |
CCTTCAGAGACTCCATATGA+CGG | 0.637278 | 3.3:+90404399 | MS.gene75306:CDS |
TTCAGAGACTCCATATGACG+GGG | 0.673654 | 3.3:+90404401 | MS.gene75306:CDS |
TCGTACCTTAAAATGCACGT+TGG | 0.686745 | 3.3:-90404508 | None:intergenic |
CAGATTGCAGAGTCCATGCG+GGG | 0.695314 | 3.3:-90406486 | None:intergenic |
GTACCTTAAAATGCACGTTG+GGG | 0.705376 | 3.3:-90404506 | None:intergenic |
TCAGAGACTCCATATGACGG+GGG | 0.759301 | 3.3:+90404402 | MS.gene75306:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TACATCAAAAATTAAATAAA+TGG | - | chr3.3:90405639-90405658 | None:intergenic | 10.0% |
!! | ACAATTGTATGATAAAAATA+GGG | + | chr3.3:90404591-90404610 | MS.gene75306:intron | 15.0% |
!! | GATGTTTAAAAATAGTTAAT+TGG | - | chr3.3:90406790-90406809 | None:intergenic | 15.0% |
!! | TCAAATTTATAAAGAACAAA+AGG | - | chr3.3:90406341-90406360 | None:intergenic | 15.0% |
!!! | AAAATAAGGTGTATATATTT+TGG | - | chr3.3:90407035-90407054 | None:intergenic | 15.0% |
!!! | AGTTTTATTATTTATTTGGA+GGG | - | chr3.3:90406655-90406674 | None:intergenic | 15.0% |
!!! | ATAACTTCATTTTATTCAAT+TGG | + | chr3.3:90406364-90406383 | MS.gene75306:intron | 15.0% |
!!! | GTTTATTTTGTTCAATATTA+GGG | + | chr3.3:90404375-90404394 | MS.gene75306:intron | 15.0% |
!!! | TAGCAGTTTTATTATTTATT+TGG | - | chr3.3:90406659-90406678 | None:intergenic | 15.0% |
!! | AAAAATTAAATAAATGGCAC+TGG | - | chr3.3:90405633-90405652 | None:intergenic | 20.0% |
!! | AGAGAAAGAAAAAAATGATA+TGG | - | chr3.3:90406598-90406617 | None:intergenic | 20.0% |
!! | CAAACGATGTTAATTTATAA+GGG | + | chr3.3:90405837-90405856 | MS.gene75306:intron | 20.0% |
!! | CACAATTGTATGATAAAAAT+AGG | + | chr3.3:90404590-90404609 | MS.gene75306:intron | 20.0% |
!! | TAATCATATATCAAATTGGT+TGG | + | chr3.3:90404936-90404955 | MS.gene75306:intron | 20.0% |
!! | TAGCTAATCATATATCAAAT+TGG | + | chr3.3:90404932-90404951 | MS.gene75306:intron | 20.0% |
!!! | AAGTTTTTATGAAACTCAAA+GGG | - | chr3.3:90406258-90406277 | None:intergenic | 20.0% |
!!! | AGTATAGCTTTATTGATTAT+AGG | + | chr3.3:90406715-90406734 | MS.gene75306:intron | 20.0% |
!!! | ATGATTCCAACATTTTTAAA+TGG | + | chr3.3:90404258-90404277 | MS.gene75306:CDS | 20.0% |
!!! | ATTAACTTGTATTTGTTTGT+TGG | + | chr3.3:90404060-90404079 | MS.gene75306:intron | 20.0% |
!!! | CAGTTTTATTATTTATTTGG+AGG | - | chr3.3:90406656-90406675 | None:intergenic | 20.0% |
!!! | GGTTTATTTTGTTCAATATT+AGG | + | chr3.3:90404374-90404393 | MS.gene75306:intron | 20.0% |
!!! | TAACATTTTAACATATCTCA+GGG | - | chr3.3:90404634-90404653 | None:intergenic | 20.0% |
!!! | TATTTTAATTGTGATGGAAA+AGG | + | chr3.3:90405268-90405287 | MS.gene75306:intron | 20.0% |
! | AACTAATATACCAAATTGGT+TGG | + | chr3.3:90405016-90405035 | MS.gene75306:intron | 25.0% |
! | AAGAAACTTGTATTCAGATA+TGG | + | chr3.3:90406683-90406702 | MS.gene75306:intron | 25.0% |
! | AATTAAGATTTAGACTGGTA+TGG | + | chr3.3:90406148-90406167 | MS.gene75306:intron | 25.0% |
! | AGAGCTTGATTTAAAAATAG+AGG | + | chr3.3:90405893-90405912 | MS.gene75306:intron | 25.0% |
! | AGCTTGATTTAAAAATAGAG+GGG | + | chr3.3:90405895-90405914 | MS.gene75306:intron | 25.0% |
! | ATCAATAAAGCTATACTACA+TGG | - | chr3.3:90406712-90406731 | None:intergenic | 25.0% |
! | CCAGTAAGTTAATGTTAATT+CGG | + | chr3.3:90405221-90405240 | MS.gene75306:intron | 25.0% |
! | GAAAGCAAAAATAATTGACT+AGG | - | chr3.3:90406319-90406338 | None:intergenic | 25.0% |
! | GAGCTTGATTTAAAAATAGA+GGG | + | chr3.3:90405894-90405913 | MS.gene75306:intron | 25.0% |
! | GCAAACGATGTTAATTTATA+AGG | + | chr3.3:90405836-90405855 | MS.gene75306:intron | 25.0% |
! | GTTTCAGTACAAAGAAAATA+AGG | - | chr3.3:90407049-90407068 | None:intergenic | 25.0% |
! | GTTTGATTCAAAAGTTAAAC+TGG | - | chr3.3:90405670-90405689 | None:intergenic | 25.0% |
! | TATAATGAACAACGAAAATC+TGG | - | chr3.3:90406934-90406953 | None:intergenic | 25.0% |
! | TCAATAAAGCTATACTACAT+GGG | - | chr3.3:90406711-90406730 | None:intergenic | 25.0% |
! | TGAGTTTCATAAAAACTTGT+TGG | + | chr3.3:90406260-90406279 | MS.gene75306:intron | 25.0% |
! | TTTATTATTTATTTGGAGGG+AGG | - | chr3.3:90406652-90406671 | None:intergenic | 25.0% |
! | TTTGACATTTCACTTAATGA+TGG | + | chr3.3:90406861-90406880 | MS.gene75306:intron | 25.0% |
!! | CAAGTTTTTATGAAACTCAA+AGG | - | chr3.3:90406259-90406278 | None:intergenic | 25.0% |
!! | TGTTATTTGAAGATATCTCA+GGG | + | chr3.3:90405925-90405944 | MS.gene75306:intron | 25.0% |
!!! | AACATTTTAACATATCTCAG+GGG | - | chr3.3:90404633-90404652 | None:intergenic | 25.0% |
!!! | ATATATTTTGGAATGAGTTG+CGG | - | chr3.3:90407023-90407042 | None:intergenic | 25.0% |
!!! | ATTTCTCACTTATTTTCTGT+TGG | + | chr3.3:90407116-90407135 | MS.gene75306:intron | 25.0% |
!!! | CAGTATTTTTTGGAAGATAA+AGG | + | chr3.3:90406980-90406999 | MS.gene75306:intron | 25.0% |
!!! | CTATCCTCGTTTAATTTTAA+AGG | - | chr3.3:90405875-90405894 | None:intergenic | 25.0% |
!!! | CTGAGGAATTTTTGTTTTAA+TGG | + | chr3.3:90405810-90405829 | MS.gene75306:intron | 25.0% |
!!! | CTTAGCATATCAGTATTTTT+TGG | + | chr3.3:90406970-90406989 | MS.gene75306:intron | 25.0% |
!!! | GGAATTTTTGTTTTAATGGA+TGG | + | chr3.3:90405814-90405833 | MS.gene75306:intron | 25.0% |
!!! | GTAACATTTTAACATATCTC+AGG | - | chr3.3:90404635-90404654 | None:intergenic | 25.0% |
!!! | GTTTAACTTTTGAATCAAAC+CGG | + | chr3.3:90405670-90405689 | MS.gene75306:intron | 25.0% |
!!! | TCATTGAACTTGTTGAAATA+TGG | + | chr3.3:90405173-90405192 | MS.gene75306:intron | 25.0% |
AACTGAAAAAAGCAAAGTCA+CGG | - | chr3.3:90404861-90404880 | None:intergenic | 30.0% | |
AAGGTAACAGTGTTAAAGTT+GGG | - | chr3.3:90404687-90404706 | None:intergenic | 30.0% | |
AATTAGGGATATTCACAAGT+TGG | + | chr3.3:90406027-90406046 | MS.gene75306:intron | 30.0% | |
ACGATGTTAATTTATAAGGG+AGG | + | chr3.3:90405840-90405859 | MS.gene75306:intron | 30.0% | |
AGATTTGAATTTGAACGAAC+CGG | + | chr3.3:90404326-90404345 | MS.gene75306:intron | 30.0% | |
AGCTGTCCATTTAAAAATGT+TGG | - | chr3.3:90404267-90404286 | None:intergenic | 30.0% | |
ATCAATTATGCTCGATAGAA+TGG | + | chr3.3:90406819-90406838 | MS.gene75306:intron | 30.0% | |
CCGAATTAACATTAACTTAC+TGG | - | chr3.3:90405224-90405243 | None:intergenic | 30.0% | |
CTCTAACTTATCAACATCAT+TGG | - | chr3.3:90406206-90406225 | None:intergenic | 30.0% | |
CTGAAAACTTGTAATCTAGT+TGG | + | chr3.3:90407083-90407102 | MS.gene75306:intron | 30.0% | |
GAGCAACTAATATACCAAAT+TGG | + | chr3.3:90405012-90405031 | MS.gene75306:intron | 30.0% | |
GGTATATTAGTTGCTCAATT+TGG | - | chr3.3:90405008-90405027 | None:intergenic | 30.0% | |
GGTTGAATTAAGATTTAGAC+TGG | + | chr3.3:90406143-90406162 | MS.gene75306:intron | 30.0% | |
TAGAGCTATAATTGCATTGA+TGG | + | chr3.3:90406513-90406532 | MS.gene75306:CDS | 30.0% | |
TAGATATCTTGAAAACTGCT+TGG | + | chr3.3:90406461-90406480 | MS.gene75306:CDS | 30.0% | |
TATAACTTCTTTCCATTCCA+TGG | - | chr3.3:90406625-90406644 | None:intergenic | 30.0% | |
TCAATTATGCTCGATAGAAT+GGG | + | chr3.3:90406820-90406839 | MS.gene75306:intron | 30.0% | |
TCATTATAAAATTTCCCAGC+AGG | + | chr3.3:90406946-90406965 | MS.gene75306:intron | 30.0% | |
TTTATGAAACTCAAAGGGTA+GGG | - | chr3.3:90406253-90406272 | None:intergenic | 30.0% | |
! | CTTGTAATAATTTTGCAGAC+CGG | + | chr3.3:90406427-90406446 | MS.gene75306:intron | 30.0% |
! | CTTGTATTTGTTTGTTGGTT+AGG | + | chr3.3:90404065-90404084 | MS.gene75306:intron | 30.0% |
! | TAAATGGACAGCTTTAATCA+AGG | + | chr3.3:90404274-90404293 | MS.gene75306:CDS | 30.0% |
! | TCTTTTTGTCTATAACAGCA+AGG | - | chr3.3:90404706-90404725 | None:intergenic | 30.0% |
! | TTTTATGAAACTCAAAGGGT+AGG | - | chr3.3:90406254-90406273 | None:intergenic | 30.0% |
! | TTTTTCTTTCTCTAATGCCA+TGG | + | chr3.3:90406605-90406624 | MS.gene75306:intron | 30.0% |
!! | AAGCAGTTTTCAAGATATCT+AGG | - | chr3.3:90406462-90406481 | None:intergenic | 30.0% |
!! | GTCACCTTTAAAATTAAACG+AGG | + | chr3.3:90405868-90405887 | MS.gene75306:intron | 30.0% |
!! | GTGTTATTTGAAGATATCTC+AGG | + | chr3.3:90405924-90405943 | MS.gene75306:intron | 30.0% |
!! | TTTGTTTGTGTTTTTAACGC+AGG | + | chr3.3:90404154-90404173 | MS.gene75306:intron | 30.0% |
!!! | CAGACCATAGTTTTAAAAAC+CGG | - | chr3.3:90405793-90405812 | None:intergenic | 30.0% |
!!! | GTGCTGTATTTTAATTGTGA+TGG | + | chr3.3:90405262-90405281 | MS.gene75306:intron | 30.0% |
!!! | GTTTTTAAAACTATGGTCTG+AGG | + | chr3.3:90405793-90405812 | MS.gene75306:intron | 30.0% |
!!! | TATATTTTGGAATGAGTTGC+GGG | - | chr3.3:90407022-90407041 | None:intergenic | 30.0% |
!!! | TGACTTTGCTTTTTTCAGTT+TGG | + | chr3.3:90404861-90404880 | MS.gene75306:intron | 30.0% |
AACAATAAGCCGACCAATTT+GGG | + | chr3.3:90405128-90405147 | MS.gene75306:intron | 35.0% | |
AACCTGAATCACAATTCAGT+GGG | - | chr3.3:90406558-90406577 | None:intergenic | 35.0% | |
AATCATGTGAGGCATATTAG+TGG | - | chr3.3:90405051-90405070 | None:intergenic | 35.0% | |
AATGTTAATTCGGCAACACA+TGG | + | chr3.3:90405231-90405250 | MS.gene75306:intron | 35.0% | |
AATTTCAAATCATCGCAGAC+CGG | - | chr3.3:90404348-90404367 | None:intergenic | 35.0% | |
ACTAATATGCCTCACATGAT+TGG | + | chr3.3:90405050-90405069 | MS.gene75306:intron | 35.0% | |
ACTGAAAAAAGCAAAGTCAC+GGG | - | chr3.3:90404860-90404879 | None:intergenic | 35.0% | |
AGCATAAAGTTCACCCAAAT+TGG | - | chr3.3:90405144-90405163 | None:intergenic | 35.0% | |
AGGTAACAGTGTTAAAGTTG+GGG | - | chr3.3:90404686-90404705 | None:intergenic | 35.0% | |
AGTGAAATGTCAAATCCTAG+TGG | - | chr3.3:90406855-90406874 | None:intergenic | 35.0% | |
ATACCAAATTGGTTGGAACA+TGG | + | chr3.3:90405023-90405042 | MS.gene75306:intron | 35.0% | |
ATTATTTATTTGGAGGGAGG+AGG | - | chr3.3:90406649-90406668 | None:intergenic | 35.0% | |
CAAGGTAACAGTGTTAAAGT+TGG | - | chr3.3:90404688-90404707 | None:intergenic | 35.0% | |
CATGTTGCATGTGATTAGAT+CGG | + | chr3.3:90406084-90406103 | MS.gene75306:intron | 35.0% | |
CTAATATGCCTCACATGATT+GGG | + | chr3.3:90405051-90405070 | MS.gene75306:intron | 35.0% | |
CTAATCACATGCAACATGTT+TGG | - | chr3.3:90406082-90406101 | None:intergenic | 35.0% | |
GAACCATCAGTGTGAAATTA+GGG | + | chr3.3:90406012-90406031 | MS.gene75306:intron | 35.0% | |
GAGTTAGGGTTATGCAAAAT+TGG | + | chr3.3:90404087-90404106 | MS.gene75306:intron | 35.0% | |
TAAAGTTCACCCAAATTGGT+CGG | - | chr3.3:90405140-90405159 | None:intergenic | 35.0% | |
TAACAATAAGCCGACCAATT+TGG | + | chr3.3:90405127-90405146 | MS.gene75306:intron | 35.0% | |
TAATATGCCTCACATGATTG+GGG | + | chr3.3:90405052-90405071 | MS.gene75306:intron | 35.0% | |
TATCCCTAATTTCACACTGA+TGG | - | chr3.3:90406018-90406037 | None:intergenic | 35.0% | |
TGAACCATCAGTGTGAAATT+AGG | + | chr3.3:90406011-90406030 | MS.gene75306:intron | 35.0% | |
TGTTCACATGAAGAGTGAAT+GGG | + | chr3.3:90405985-90406004 | MS.gene75306:intron | 35.0% | |
TTAGTCAAAAAGCGAACTTG+AGG | - | chr3.3:90404477-90404496 | None:intergenic | 35.0% | |
TTATGAAACTCAAAGGGTAG+GGG | - | chr3.3:90406252-90406271 | None:intergenic | 35.0% | |
TTCAACCGTTTGATTCAGAT+TGG | - | chr3.3:90406130-90406149 | None:intergenic | 35.0% | |
TTGTTCACATGAAGAGTGAA+TGG | + | chr3.3:90405984-90406003 | MS.gene75306:intron | 35.0% | |
! | AGCAAGCTTAGCATTGAAAT+TGG | + | chr3.3:90404130-90404149 | MS.gene75306:intron | 35.0% |
! | CGATGATTTGAAATTTGCTC+TGG | + | chr3.3:90404353-90404372 | MS.gene75306:intron | 35.0% |
! | GGTCTATTTTCATCTTGGTT+TGG | + | chr3.3:90404957-90404976 | MS.gene75306:intron | 35.0% |
! | TGGTTTTCCCATTATAGAGA+GGG | - | chr3.3:90406186-90406205 | None:intergenic | 35.0% |
! | TGTTTGTTGGTTAGGAGTTA+GGG | + | chr3.3:90404073-90404092 | MS.gene75306:intron | 35.0% |
! | TTGTTTGTTGGTTAGGAGTT+AGG | + | chr3.3:90404072-90404091 | MS.gene75306:intron | 35.0% |
!! | TCTCACTTATTTTCTGTTGG+CGG | + | chr3.3:90407119-90407138 | MS.gene75306:intron | 35.0% |
!! | TTGGTTTTCCCATTATAGAG+AGG | - | chr3.3:90406187-90406206 | None:intergenic | 35.0% |
!! | TTGTTTCGAGTTTGTGGTAT+AGG | + | chr3.3:90406051-90406070 | MS.gene75306:intron | 35.0% |
!!! | AATGGTGTTTTTCTGAAGTC+TGG | + | chr3.3:90404816-90404835 | MS.gene75306:intron | 35.0% |
!!! | CATAGTTTTAAAAACCGGAC+AGG | - | chr3.3:90405788-90405807 | None:intergenic | 35.0% |
!!! | CTGTCCGGTTTTTAAAACTA+TGG | + | chr3.3:90405786-90405805 | MS.gene75306:intron | 35.0% |
!!! | TATTTTCATCTTGGTTTGGC+TGG | + | chr3.3:90404961-90404980 | MS.gene75306:intron | 35.0% |
!!! | TGGTTGGTCTATTTTCATCT+TGG | + | chr3.3:90404952-90404971 | MS.gene75306:intron | 35.0% |
ACTTTACATCCTTAACCGCT+GGG | - | chr3.3:90405576-90405595 | None:intergenic | 40.0% | |
ATAGGCGATCAGATTGAAAC+TGG | + | chr3.3:90406733-90406752 | MS.gene75306:intron | 40.0% | |
ATCTGATAGTAACCTGCAGA+AGG | - | chr3.3:90404539-90404558 | None:intergenic | 40.0% | |
ATTGTTAACCCGACAACAAG+TGG | - | chr3.3:90405114-90405133 | None:intergenic | 40.0% | |
CAACCTGAATCACAATTCAG+TGG | - | chr3.3:90406559-90406578 | None:intergenic | 40.0% | |
CACGCAGTTAAAGAACAGAA+GGG | - | chr3.3:90406887-90406906 | None:intergenic | 40.0% | |
CCATTATTACCCTCAAGCAT+AGG | - | chr3.3:90404801-90404820 | None:intergenic | 40.0% | |
CCTATGCTTGAGGGTAATAA+TGG | + | chr3.3:90404798-90404817 | MS.gene75306:intron | 40.0% | |
CGTACCTTAAAATGCACGTT+GGG | - | chr3.3:90404510-90404529 | None:intergenic | 40.0% | |
CTGAAAAAAGCAAAGTCACG+GGG | - | chr3.3:90404859-90404878 | None:intergenic | 40.0% | |
CTTGCAGCAATGCCAAAAAA+AGG | + | chr3.3:90407209-90407228 | MS.gene75306:CDS | 40.0% | |
CTTTCTCTAATGCCATGGAA+TGG | + | chr3.3:90406610-90406629 | MS.gene75306:intron | 40.0% | |
GACCAGATATGCATATGAAC+CGG | - | chr3.3:90405721-90405740 | None:intergenic | 40.0% | |
GATATCTAGGCAAATCTCTC+CGG | - | chr3.3:90406449-90406468 | None:intergenic | 40.0% | |
GGTAACAGTGTTAAAGTTGG+GGG | - | chr3.3:90404685-90404704 | None:intergenic | 40.0% | |
GGTTGTAAAGGATAATGCTC+TGG | - | chr3.3:90404453-90404472 | None:intergenic | 40.0% | |
GTACCTTAAAATGCACGTTG+GGG | - | chr3.3:90404509-90404528 | None:intergenic | 40.0% | |
TACTTTACATCCTTAACCGC+TGG | - | chr3.3:90405577-90405596 | None:intergenic | 40.0% | |
TATGAAACTCAAAGGGTAGG+GGG | - | chr3.3:90406251-90406270 | None:intergenic | 40.0% | |
TCAGATTGAAACTGGACTTG+AGG | + | chr3.3:90406741-90406760 | MS.gene75306:intron | 40.0% | |
TCCAGCCAATCTGAATCAAA+CGG | + | chr3.3:90406122-90406141 | MS.gene75306:intron | 40.0% | |
TCGTACCTTAAAATGCACGT+TGG | - | chr3.3:90404511-90404530 | None:intergenic | 40.0% | |
TGGTGTCTCATCTATGAAAC+TGG | + | chr3.3:90404757-90404776 | MS.gene75306:intron | 40.0% | |
TGTCTGTCGTCTTCTTCATT+TGG | + | chr3.3:90404737-90404756 | MS.gene75306:intron | 40.0% | |
TTGACTGCCCTCTCTATAAT+GGG | + | chr3.3:90406176-90406195 | MS.gene75306:intron | 40.0% | |
! | AACCGGTTCATATGCATATC+TGG | + | chr3.3:90405716-90405735 | MS.gene75306:intron | 40.0% |
! | GTTTTTAACGCAGGCATCAA+GGG | + | chr3.3:90404163-90404182 | MS.gene75306:intron | 40.0% |
! | TAAATGGCACTGGATCTCTA+AGG | - | chr3.3:90405623-90405642 | None:intergenic | 40.0% |
! | TCGCAAACGAGTTGAATATC+AGG | - | chr3.3:90404239-90404258 | None:intergenic | 40.0% |
! | TTGAATCAAACCGGTTCAAC+CGG | + | chr3.3:90405679-90405698 | MS.gene75306:intron | 40.0% |
!! | TGTTTTTAACGCAGGCATCA+AGG | + | chr3.3:90404162-90404181 | MS.gene75306:intron | 40.0% |
!! | TTTCGAGTTTGTGGTATAGG+AGG | + | chr3.3:90406054-90406073 | MS.gene75306:intron | 40.0% |
!!! | ACGTGCATTTTAAGGTACGA+TGG | + | chr3.3:90404511-90404530 | MS.gene75306:intron | 40.0% |
AACAAGTGGCATACAGGATG+CGG | - | chr3.3:90405100-90405119 | None:intergenic | 45.0% | |
AACAGATTGCAGAGTCCATG+CGG | - | chr3.3:90406491-90406510 | None:intergenic | 45.0% | |
ACCGTTTGATTCAGATTGGC+TGG | - | chr3.3:90406126-90406145 | None:intergenic | 45.0% | |
ACTGATATGCTAAGACCTGC+TGG | - | chr3.3:90406964-90406983 | None:intergenic | 45.0% | |
AGCCCACTGAATTGTGATTC+AGG | + | chr3.3:90406553-90406572 | MS.gene75306:CDS | 45.0% | |
CCATGGCAAGAATGTACACT+AGG | + | chr3.3:90407186-90407205 | MS.gene75306:CDS | 45.0% | |
CCTAAAGCTCCTATGCTTGA+GGG | + | chr3.3:90404789-90404808 | MS.gene75306:intron | 45.0% | |
CCTAGTGTACATTCTTGCCA+TGG | - | chr3.3:90407189-90407208 | None:intergenic | 45.0% | |
CCTTCAGAGACTCCATATGA+CGG | + | chr3.3:90404399-90404418 | MS.gene75306:CDS | 45.0% | |
CGAACTTGAGGAGGTTGTAA+AGG | - | chr3.3:90404465-90404484 | None:intergenic | 45.0% | |
CGGTTGAACTGGAAATCAAC+CGG | + | chr3.3:90405699-90405718 | MS.gene75306:intron | 45.0% | |
CTACGTTCAGGTGATGTTAG+AGG | + | chr3.3:90407155-90407174 | MS.gene75306:CDS | 45.0% | |
CTCAATACCCCAATCATGTG+AGG | - | chr3.3:90405062-90405081 | None:intergenic | 45.0% | |
CTGATATGCTAAGACCTGCT+GGG | - | chr3.3:90406963-90406982 | None:intergenic | 45.0% | |
CTGGAACAGAAAATGCAAGC+TGG | - | chr3.3:90404434-90404453 | None:intergenic | 45.0% | |
CTTCAGAGACTCCATATGAC+GGG | + | chr3.3:90404400-90404419 | MS.gene75306:CDS | 45.0% | |
CTTGACTGCCCTCTCTATAA+TGG | + | chr3.3:90406175-90406194 | MS.gene75306:intron | 45.0% | |
GCACGCAGTTAAAGAACAGA+AGG | - | chr3.3:90406888-90406907 | None:intergenic | 45.0% | |
GCAGGTAATCTTCTACGTTC+AGG | + | chr3.3:90407143-90407162 | MS.gene75306:intron | 45.0% | |
GTCAAAAAGCGAACTTGAGG+AGG | - | chr3.3:90404474-90404493 | None:intergenic | 45.0% | |
GTGCCATGTTCCAACCAATT+TGG | - | chr3.3:90405029-90405048 | None:intergenic | 45.0% | |
GTGTTAAAGTTGGGGGTCTT+TGG | - | chr3.3:90404678-90404697 | None:intergenic | 45.0% | |
TATGCTCGATAGAATGGGTG+TGG | + | chr3.3:90406825-90406844 | MS.gene75306:intron | 45.0% | |
TCGGCAACACATGGTAATTC+AGG | + | chr3.3:90405240-90405259 | MS.gene75306:intron | 45.0% | |
TGTTAGAGGCTATCAGTCCA+TGG | + | chr3.3:90407169-90407188 | MS.gene75306:CDS | 45.0% | |
TTCAGAGACTCCATATGACG+GGG | + | chr3.3:90404401-90404420 | MS.gene75306:CDS | 45.0% | |
! | AAGATTCCACGTTTTCCCAG+CGG | + | chr3.3:90405558-90405577 | MS.gene75306:intron | 45.0% |
! | CGGTTGATTTCCAGTTCAAC+CGG | - | chr3.3:90405701-90405720 | None:intergenic | 45.0% |
! | TCACCCCAACGTGCATTTTA+AGG | + | chr3.3:90404503-90404522 | MS.gene75306:CDS | 45.0% |
! | TTATTTTCTGTTGGCGGTGC+AGG | + | chr3.3:90407125-90407144 | MS.gene75306:intron | 45.0% |
!! | GTTGGCTTGTTTCGAGTTTG+TGG | + | chr3.3:90406045-90406064 | MS.gene75306:intron | 45.0% |
!! | TCCTGTATGCCACTTGTTGT+CGG | + | chr3.3:90405102-90405121 | MS.gene75306:intron | 45.0% |
!! | TGGGGTATTGAGCCATTATC+TGG | + | chr3.3:90405070-90405089 | MS.gene75306:intron | 45.0% |
ACAGATTGCAGAGTCCATGC+GGG | - | chr3.3:90406490-90406509 | None:intergenic | 50.0% | |
ATCTGGTCCAACACCGTTAC+TGG | + | chr3.3:90405733-90405752 | MS.gene75306:intron | 50.0% | |
CCCTCAAGCATAGGAGCTTT+AGG | - | chr3.3:90404792-90404811 | None:intergenic | 50.0% | |
CCGTCATATGGAGTCTCTGA+AGG | - | chr3.3:90404402-90404421 | None:intergenic | 50.0% | |
CTGAAGTCTGGTGTGAGTGA+TGG | + | chr3.3:90404828-90404847 | MS.gene75306:intron | 50.0% | |
GCCTAAAGCTCCTATGCTTG+AGG | + | chr3.3:90404788-90404807 | MS.gene75306:intron | 50.0% | |
GGATGCGGACATCCAGATAA+TGG | - | chr3.3:90405085-90405104 | None:intergenic | 50.0% | |
GGGGTCTTTGGCAAACTAGA+GGG | - | chr3.3:90404666-90404685 | None:intergenic | 50.0% | |
GGGTCTTTGGCAAACTAGAG+GGG | - | chr3.3:90404665-90404684 | None:intergenic | 50.0% | |
TCAGAGACTCCATATGACGG+GGG | + | chr3.3:90404402-90404421 | MS.gene75306:CDS | 50.0% | |
TCCAGTTCAACCGGTTGAAC+CGG | - | chr3.3:90405692-90405711 | None:intergenic | 50.0% | |
TGGAAAACACCCCCGTCATA+TGG | - | chr3.3:90404414-90404433 | None:intergenic | 50.0% | |
TGGAATGAGTTGCGGGCTTA+AGG | - | chr3.3:90407015-90407034 | None:intergenic | 50.0% | |
!! | CCTGTATGCCACTTGTTGTC+GGG | + | chr3.3:90405103-90405122 | MS.gene75306:intron | 50.0% |
!! | TCACAATTCAGTGGGCTGTC+AGG | - | chr3.3:90406550-90406569 | None:intergenic | 50.0% |
AAAAACCGGACAGGCCGAAC+CGG | - | chr3.3:90405779-90405798 | None:intergenic | 55.0% | |
AATGGGTGTGGTGGTCCACT+AGG | + | chr3.3:90406837-90406856 | MS.gene75306:intron | 55.0% | |
CAGATTGCAGAGTCCATGCG+GGG | - | chr3.3:90406489-90406508 | None:intergenic | 55.0% | |
CCCGACAACAAGTGGCATAC+AGG | - | chr3.3:90405106-90405125 | None:intergenic | 55.0% | |
CCTTAACCGCTGGGAAAACG+TGG | - | chr3.3:90405567-90405586 | None:intergenic | 55.0% | |
GCTCGATAGAATGGGTGTGG+TGG | + | chr3.3:90406828-90406847 | MS.gene75306:intron | 55.0% | |
GGGGGTCTTTGGCAAACTAG+AGG | - | chr3.3:90404667-90404686 | None:intergenic | 55.0% | |
GGTACGATGGATCCTTCTGC+AGG | + | chr3.3:90404524-90404543 | MS.gene75306:intron | 55.0% | |
GTCCAACACCGTTACTGGAC+CGG | + | chr3.3:90405738-90405757 | MS.gene75306:intron | 55.0% | |
! | AAGGGTAGGGGGCGTAATAG+TGG | - | chr3.3:90406240-90406259 | None:intergenic | 55.0% |
! | ACCGGTTCAACCGGTTGAAC+TGG | + | chr3.3:90405688-90405707 | MS.gene75306:intron | 55.0% |
! | CATGGGTCTGGTTTCCGGTT+CGG | + | chr3.3:90405762-90405781 | MS.gene75306:intron | 55.0% |
! | CCACGTTTTCCCAGCGGTTA+AGG | + | chr3.3:90405564-90405583 | MS.gene75306:intron | 55.0% |
!! | TTCAGTGGGCTGTCAGGTTC+TGG | - | chr3.3:90406544-90406563 | None:intergenic | 55.0% |
AAACTGCTTGGAGCCCCGCA+TGG | + | chr3.3:90406473-90406492 | MS.gene75306:CDS | 60.0% | |
ACCCATGGCCGGTCCAGTAA+CGG | - | chr3.3:90405749-90405768 | None:intergenic | 60.0% | |
ACCGTTACTGGACCGGCCAT+GGG | + | chr3.3:90405745-90405764 | MS.gene75306:intron | 60.0% | |
CGAACCGGAAACCAGACCCA+TGG | - | chr3.3:90405764-90405783 | None:intergenic | 60.0% | |
TAACGCAGGCATCAAGGGCG+AGG | + | chr3.3:90404168-90404187 | MS.gene75306:intron | 60.0% | |
CACCGTTACTGGACCGGCCA+TGG | + | chr3.3:90405744-90405763 | MS.gene75306:intron | 65.0% | |
CCGGAAACCAGACCCATGGC+CGG | - | chr3.3:90405760-90405779 | None:intergenic | 65.0% | |
GGCCGGTCCAGTAACGGTGT+TGG | - | chr3.3:90405743-90405762 | None:intergenic | 65.0% | |
TACTGGACCGGCCATGGGTC+TGG | + | chr3.3:90405750-90405769 | MS.gene75306:intron | 65.0% | |
! | CCGGCCATGGGTCTGGTTTC+CGG | + | chr3.3:90405757-90405776 | MS.gene75306:intron | 65.0% |
!! | GGTTTCCGGTTCGGCCTGTC+CGG | + | chr3.3:90405771-90405790 | MS.gene75306:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 90404017 | 90407235 | 90404017 | ID=MS.gene75306 |
chr3.3 | mRNA | 90404017 | 90407235 | 90404017 | ID=MS.gene75306.t1;Parent=MS.gene75306 |
chr3.3 | exon | 90404017 | 90404022 | 90404017 | ID=MS.gene75306.t1.exon1;Parent=MS.gene75306.t1 |
chr3.3 | CDS | 90404017 | 90404022 | 90404017 | ID=cds.MS.gene75306.t1;Parent=MS.gene75306.t1 |
chr3.3 | exon | 90404176 | 90404295 | 90404176 | ID=MS.gene75306.t1.exon2;Parent=MS.gene75306.t1 |
chr3.3 | CDS | 90404176 | 90404295 | 90404176 | ID=cds.MS.gene75306.t1;Parent=MS.gene75306.t1 |
chr3.3 | exon | 90404396 | 90404524 | 90404396 | ID=MS.gene75306.t1.exon3;Parent=MS.gene75306.t1 |
chr3.3 | CDS | 90404396 | 90404524 | 90404396 | ID=cds.MS.gene75306.t1;Parent=MS.gene75306.t1 |
chr3.3 | exon | 90406445 | 90406574 | 90406445 | ID=MS.gene75306.t1.exon4;Parent=MS.gene75306.t1 |
chr3.3 | CDS | 90406445 | 90406574 | 90406445 | ID=cds.MS.gene75306.t1;Parent=MS.gene75306.t1 |
chr3.3 | exon | 90407147 | 90407235 | 90407147 | ID=MS.gene75306.t1.exon5;Parent=MS.gene75306.t1 |
chr3.3 | CDS | 90407147 | 90407235 | 90407147 | ID=cds.MS.gene75306.t1;Parent=MS.gene75306.t1 |
Gene Sequence |
Protein sequence |