AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40316

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40316.t1 MTR_3g110110 99.363 157 1 0 1 157 1 157 2.88e-118 330
MS.gene40316.t1 MTR_4g073240 42.177 147 81 3 7 153 5 147 3.99e-35 119
MS.gene40316.t1 MTR_8g071040 42.177 147 81 3 7 153 5 147 5.58e-35 119
MS.gene40316.t1 MTR_5g075580 40.816 147 83 3 7 153 5 147 1.17e-34 118
MS.gene40316.t1 MTR_1g021150 41.497 147 82 3 7 153 5 147 1.21e-34 118
MS.gene40316.t1 MTR_3g062450 40.816 147 83 3 7 153 5 147 1.36e-34 118
MS.gene40316.t1 MTR_7g116940 40.816 147 83 3 7 153 5 147 3.39e-34 117
MS.gene40316.t1 MTR_4g108080 38.732 142 83 3 4 145 5 142 9.79e-34 116
MS.gene40316.t1 MTR_2g078010 40.411 146 83 3 7 152 9 150 1.57e-33 115
MS.gene40316.t1 MTR_8g468530 38.732 142 83 3 4 145 21 158 1.60e-33 116
MS.gene40316.t1 MTR_7g116940 39.610 154 82 4 7 153 5 154 1.03e-32 114
MS.gene40316.t1 MTR_3g098780 42.373 118 67 1 6 123 5 121 3.05e-32 114
MS.gene40316.t1 MTR_4g073240 45.000 120 64 2 34 153 1 118 3.34e-32 111
MS.gene40316.t1 MTR_1g021150 44.628 121 65 2 33 153 37 155 5.06e-32 112
MS.gene40316.t1 MTR_2g078010 39.706 136 79 2 7 142 9 141 5.30e-32 112
MS.gene40316.t1 MTR_3g098780 42.373 118 67 1 6 123 29 145 6.40e-32 113
MS.gene40316.t1 MTR_5g075580 44.167 120 65 2 34 153 1 118 7.32e-32 110
MS.gene40316.t1 MTR_2g078010 36.875 160 83 4 7 152 9 164 1.61e-29 106
MS.gene40316.t1 MTR_4g108080 41.667 108 60 2 4 111 5 109 8.91e-28 100
MS.gene40316.t1 MTR_2g078010 44.118 102 54 2 7 108 9 107 6.41e-26 95.1
MS.gene40316.t1 MTR_7g116940 43.519 108 58 2 7 114 5 109 1.08e-25 95.1
MS.gene40316.t1 MTR_7g087590 36.913 149 90 3 7 155 14 158 1.54e-25 98.6
MS.gene40316.t1 MTR_4g108080 39.815 108 63 2 38 145 37 142 2.79e-25 94.7
MS.gene40316.t1 MTR_1g095510 41.905 105 60 1 21 125 4 107 1.71e-24 92.4
MS.gene40316.t1 MTR_1g095510 41.905 105 60 1 21 125 58 161 2.76e-24 93.6
MS.gene40316.t1 MTR_4g063490 33.613 119 65 2 28 133 28 145 4.59e-23 89.7
MS.gene40316.t1 MTR_4g076200 36.607 112 70 1 20 131 6 116 1.02e-22 87.8
MS.gene40316.t1 MTR_8g028920 31.618 136 89 3 21 155 18 150 1.46e-22 89.0
MS.gene40316.t1 MTR_2g096690 34.454 119 64 2 28 133 28 145 2.40e-22 87.8
MS.gene40316.t1 MTR_4g076200 39.216 102 61 1 30 131 57 157 3.44e-22 87.8
MS.gene40316.t1 MTR_2g096690 34.783 115 61 2 28 129 28 141 4.55e-22 87.0
MS.gene40316.t1 MTR_5g009020 36.607 112 70 1 20 131 47 157 5.21e-22 87.0
MS.gene40316.t1 MTR_1g095510 41.053 95 55 1 21 115 58 151 5.61e-21 84.3
MS.gene40316.t1 MTR_4g106690 29.630 135 91 3 14 147 11 142 7.61e-21 84.3
MS.gene40316.t1 MTR_8g085690 37.500 120 72 2 1 120 20 136 1.77e-20 82.8
MS.gene40316.t1 MTR_8g098595 32.456 114 75 2 43 155 23 135 5.97e-20 81.6
MS.gene40316.t1 MTR_8g028920 33.945 109 70 2 48 155 4 111 2.53e-19 79.3
MS.gene40316.t1 MTR_5g019480 30.827 133 88 3 3 135 29 157 3.75e-18 77.4
MS.gene40316.t1 MTR_5g019480 30.827 133 88 3 3 135 32 160 3.90e-18 77.4
MS.gene40316.t1 MTR_4g073240 45.238 84 44 2 70 153 4 85 7.72e-18 73.9
MS.gene40316.t1 MTR_5g019480 31.532 111 74 2 25 135 1 109 8.14e-17 72.4
MS.gene40316.t1 MTR_2g096690 44.776 67 36 1 28 94 28 93 2.57e-16 70.9
MS.gene40316.t1 MTR_4g094872 30.719 153 95 6 4 149 5 153 2.63e-16 72.0
MS.gene40316.t1 MTR_4g121960 34.513 113 64 4 7 115 14 120 1.11e-15 72.8
MS.gene40316.t1 MTR_8g076490 37.864 103 59 3 7 108 19 117 1.04e-14 67.8
MS.gene40316.t1 MTR_5g016630 29.496 139 82 4 4 132 5 137 1.25e-14 67.4
MS.gene40316.t1 MTR_5g021260 41.558 77 43 2 33 108 42 117 2.79e-14 66.6
MS.gene40316.t1 MTR_8g023380 28.800 125 79 4 2 122 4 122 2.14e-11 60.1
MS.gene40316.t1 MTR_1g073600 33.333 66 44 0 39 104 27 92 5.29e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40316.t1 AT5G25760 94.268 157 9 0 1 157 1 157 1.16e-112 316
MS.gene40316.t1 AT5G25760 94.268 157 9 0 1 157 1 157 1.16e-112 316
MS.gene40316.t1 AT5G53300 42.857 147 80 3 7 153 5 147 4.30e-36 122
MS.gene40316.t1 AT5G53300 42.857 147 80 3 7 153 5 147 4.30e-36 122
MS.gene40316.t1 AT5G53300 42.857 147 80 3 7 153 5 147 4.30e-36 122
MS.gene40316.t1 AT4G27960 42.177 147 81 3 7 153 5 147 6.29e-36 122
MS.gene40316.t1 AT1G64230 42.857 147 80 3 7 153 5 147 1.10e-35 121
MS.gene40316.t1 AT1G64230 42.857 147 80 3 7 153 5 147 1.10e-35 121
MS.gene40316.t1 AT4G27960 40.523 153 87 3 1 153 29 177 1.10e-35 122
MS.gene40316.t1 AT3G08690 41.497 147 82 3 7 153 5 147 1.93e-35 120
MS.gene40316.t1 AT3G08690 41.497 147 82 3 7 153 5 147 1.93e-35 120
MS.gene40316.t1 AT2G16740 42.282 149 78 4 7 153 5 147 1.97e-35 120
MS.gene40316.t1 AT5G41700 41.497 147 82 3 7 153 5 147 4.65e-35 119
MS.gene40316.t1 AT5G41700 41.497 147 82 3 7 153 5 147 4.65e-35 119
MS.gene40316.t1 AT5G41700 41.497 147 82 3 7 153 5 147 4.65e-35 119
MS.gene40316.t1 AT1G16890 41.096 146 82 3 7 152 9 150 4.57e-34 117
MS.gene40316.t1 AT1G64230 40.260 154 83 4 7 153 5 156 7.10e-34 117
MS.gene40316.t1 AT5G41700 40.667 150 80 4 7 153 5 148 7.74e-34 116
MS.gene40316.t1 AT1G14400 38.356 146 79 3 4 149 5 139 9.20e-34 116
MS.gene40316.t1 AT1G14400 38.356 146 79 3 4 149 5 139 9.20e-34 116
MS.gene40316.t1 AT1G78870 41.096 146 82 3 7 152 9 150 1.38e-33 116
MS.gene40316.t1 AT2G02760 38.732 142 83 3 4 145 5 142 1.41e-33 116
MS.gene40316.t1 AT2G02760 38.732 142 83 3 4 145 5 142 1.41e-33 116
MS.gene40316.t1 AT2G02760 38.732 142 83 3 4 145 5 142 1.41e-33 116
MS.gene40316.t1 AT2G02760 38.732 142 83 3 4 145 5 142 1.41e-33 116
MS.gene40316.t1 AT1G16890 43.077 130 72 2 23 152 32 159 4.59e-33 115
MS.gene40316.t1 AT5G56150 39.456 147 85 3 7 153 5 147 4.83e-33 114
MS.gene40316.t1 AT5G62540 40.580 138 78 3 4 141 5 138 8.15e-33 114
MS.gene40316.t1 AT1G64230 46.281 121 63 2 33 153 71 189 2.47e-32 114
MS.gene40316.t1 AT1G64230 46.281 121 63 2 33 153 71 189 2.47e-32 114
MS.gene40316.t1 AT1G16890 45.690 116 61 2 37 152 4 117 3.81e-32 111
MS.gene40316.t1 AT3G08700 40.136 147 85 3 7 153 5 148 4.04e-32 112
MS.gene40316.t1 AT3G08700 40.136 147 85 3 7 153 5 148 4.04e-32 112
MS.gene40316.t1 AT1G78870 45.690 116 61 2 37 152 4 117 8.99e-32 110
MS.gene40316.t1 AT5G50870 37.333 150 86 3 6 152 5 149 1.08e-30 110
MS.gene40316.t1 AT5G50870 41.525 118 68 1 6 123 5 121 1.93e-30 109
MS.gene40316.t1 AT1G78870 45.299 117 61 3 37 152 4 118 5.59e-30 105
MS.gene40316.t1 AT1G36340 40.336 119 69 2 30 148 32 148 1.76e-28 103
MS.gene40316.t1 AT1G36340 40.336 119 69 2 30 148 32 148 1.76e-28 103
MS.gene40316.t1 AT5G53300 47.525 101 50 2 7 107 5 102 7.09e-27 97.8
MS.gene40316.t1 AT5G05080 37.500 144 87 3 13 155 17 158 8.58e-27 101
MS.gene40316.t1 AT5G05080 37.500 144 87 3 13 155 17 158 8.58e-27 101
MS.gene40316.t1 AT5G05080 37.500 144 87 3 13 155 17 158 8.58e-27 101
MS.gene40316.t1 AT5G05080 37.500 144 87 3 13 155 17 158 8.58e-27 101
MS.gene40316.t1 AT5G41700 46.535 101 51 2 7 107 5 102 9.27e-27 98.6
MS.gene40316.t1 AT1G78870 45.098 102 53 2 7 108 9 107 1.67e-26 97.1
MS.gene40316.t1 AT5G56150 42.718 103 56 2 7 109 5 104 8.97e-25 92.4
MS.gene40316.t1 AT3G13550 39.024 123 72 2 1 123 34 153 4.83e-24 92.4
MS.gene40316.t1 AT3G55380 30.935 139 82 2 28 153 29 166 1.30e-23 90.9
MS.gene40316.t1 AT3G13550 38.333 120 71 2 1 120 34 150 2.94e-23 90.1
MS.gene40316.t1 AT2G46030 33.577 137 87 3 21 156 18 151 3.00e-23 90.5
MS.gene40316.t1 AT2G46030 33.577 137 87 3 21 156 18 151 3.00e-23 90.5
MS.gene40316.t1 AT2G46030 33.577 137 87 3 21 156 21 154 3.28e-23 90.5
MS.gene40316.t1 AT2G46030 33.577 137 87 3 21 156 21 154 3.28e-23 90.5
MS.gene40316.t1 AT3G20060 37.838 111 68 1 21 131 7 116 5.37e-23 88.6
MS.gene40316.t1 AT2G46030 33.577 137 87 3 21 156 90 223 6.96e-23 91.3
MS.gene40316.t1 AT3G20060 37.838 111 68 1 21 131 52 161 8.81e-23 89.4
MS.gene40316.t1 AT3G46460 35.294 119 63 2 28 133 28 145 4.94e-22 87.0
MS.gene40316.t1 AT5G41340 30.137 146 100 2 13 157 8 152 6.43e-22 87.0
MS.gene40316.t1 AT5G59300 33.613 119 65 2 28 133 28 145 6.53e-22 86.7
MS.gene40316.t1 AT1G63800 34.483 116 74 2 41 155 21 135 8.43e-22 86.7
MS.gene40316.t1 AT1G50490 39.216 102 61 1 30 131 60 160 8.97e-22 86.7
MS.gene40316.t1 AT1G63800 35.088 114 72 2 43 155 38 150 1.23e-21 86.3
MS.gene40316.t1 AT3G24515 44.086 93 47 2 39 127 49 140 1.80e-21 89.7
MS.gene40316.t1 AT3G24515 41.121 107 55 3 25 127 63 165 4.93e-21 88.6
MS.gene40316.t1 AT5G41340 35.455 110 69 2 49 157 9 117 4.21e-20 81.6
MS.gene40316.t1 AT2G32790 34.899 149 90 5 2 148 28 171 4.29e-18 77.0
MS.gene40316.t1 AT3G55380 25.434 173 81 3 28 153 29 200 6.96e-17 74.3
MS.gene40316.t1 AT2G18600 30.534 131 87 3 3 133 31 157 9.78e-17 73.6
MS.gene40316.t1 AT2G18600 30.534 131 87 3 3 133 31 157 9.78e-17 73.6
MS.gene40316.t1 AT4G36800 29.771 131 88 3 3 133 30 156 4.03e-16 72.0
MS.gene40316.t1 AT4G36800 29.771 131 88 3 3 133 30 156 4.03e-16 72.0
MS.gene40316.t1 AT1G45050 40.000 110 47 4 7 108 19 117 4.83e-16 71.2
MS.gene40316.t1 AT3G57870 35.294 102 63 2 33 132 38 138 3.05e-15 69.3
MS.gene40316.t1 AT3G17000 34.959 123 62 6 7 123 15 125 3.65e-15 71.2
MS.gene40316.t1 AT1G75440 42.857 77 42 2 33 108 42 117 8.33e-15 68.2
MS.gene40316.t1 AT3G46460 32.990 97 51 2 50 133 8 103 8.09e-14 64.7
MS.gene40316.t1 AT3G46460 32.990 97 51 2 50 133 8 103 8.09e-14 64.7
MS.gene40316.t1 AT5G42990 41.558 77 43 2 33 108 42 117 8.22e-14 65.5
MS.gene40316.t1 AT4G36410 37.864 103 59 3 7 108 19 117 1.24e-13 65.1

Find 32 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAGCTATAATTGCATTGA+TGG 0.267079 3.2:+87741156 MS.gene40316:CDS
TTCAGTGGGCTGTCAGGTTC+TGG 0.292721 3.2:-87741184 None:intergenic
CTACGTTCAGGTGATGTTAG+AGG 0.363620 3.2:+87741798 MS.gene40316:CDS
CGTACCTTAAAATGCACGTT+GGG 0.401640 3.2:-87739172 None:intergenic
TCGCAAACGAGTTGAATATC+AGG 0.409108 3.2:-87738901 None:intergenic
TCACAATTCAGTGGGCTGTC+AGG 0.446936 3.2:-87741190 None:intergenic
AGCCCACTGAATTGTGATTC+AGG 0.455844 3.2:+87741196 MS.gene40316:CDS
GCAGGTAATCTTCTACGTTC+AGG 0.470047 3.2:+87741786 MS.gene40316:intron
TAAATGGACAGCTTTAATCA+AGG 0.484965 3.2:+87738939 MS.gene40316:CDS
CGAACTTGAGGAGGTTGTAA+AGG 0.493381 3.2:-87739127 None:intergenic
GATATCTAGGCAAATCTCTC+CGG 0.497339 3.2:-87741089 None:intergenic
ATCAAGGGCGAGGCTGTTCA+AGG 0.501997 3.2:+87738843 MS.gene40316:CDS
GGTTGTAAAGGATAATGCTC+TGG 0.511645 3.2:-87739115 None:intergenic
TAGATATCTTGAAAACTGCT+TGG 0.517403 3.2:+87741104 MS.gene40316:CDS
TAACGCAGGCATCAAGGGCG+AGG 0.520499 3.2:+87738833 MS.gene40316:intron
CTGGAACAGAAAATGCAAGC+TGG 0.542398 3.2:-87739096 None:intergenic
ACAGATTGCAGAGTCCATGC+GGG 0.543633 3.2:-87741130 None:intergenic
CTTCAGAGACTCCATATGAC+GGG 0.544665 3.2:+87739065 MS.gene40316:CDS
CCATGGCAAGAATGTACACT+AGG 0.549301 3.2:+87741829 MS.gene40316:CDS
AAACTGCTTGGAGCCCCGCA+TGG 0.558893 3.2:+87741116 MS.gene40316:CDS
CCTAGTGTACATTCTTGCCA+TGG 0.608526 3.2:-87741829 None:intergenic
CCGTCATATGGAGTCTCTGA+AGG 0.612997 3.2:-87739064 None:intergenic
AACCTGAATCACAATTCAGT+GGG 0.616964 3.2:-87741198 None:intergenic
CAACCTGAATCACAATTCAG+TGG 0.619957 3.2:-87741199 None:intergenic
TGTTAGAGGCTATCAGTCCA+TGG 0.632305 3.2:+87741812 MS.gene40316:CDS
AACAGATTGCAGAGTCCATG+CGG 0.633452 3.2:-87741131 None:intergenic
CCTTCAGAGACTCCATATGA+CGG 0.637278 3.2:+87739064 MS.gene40316:CDS
TTCAGAGACTCCATATGACG+GGG 0.673654 3.2:+87739066 MS.gene40316:CDS
TCGTACCTTAAAATGCACGT+TGG 0.686745 3.2:-87739173 None:intergenic
CAGATTGCAGAGTCCATGCG+GGG 0.695314 3.2:-87741129 None:intergenic
GTACCTTAAAATGCACGTTG+GGG 0.705376 3.2:-87739171 None:intergenic
TCAGAGACTCCATATGACGG+GGG 0.759301 3.2:+87739067 MS.gene40316:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACATCAAAAATTAAATAAA+TGG - chr3.2:87740282-87740301 None:intergenic 10.0%
!! ACAATTGTATGATAAAAATA+GGG + chr3.2:87739256-87739275 MS.gene40316:intron 15.0%
!! GATGTTTAAAAATAGTTAAT+TGG - chr3.2:87741433-87741452 None:intergenic 15.0%
!! TAATAATATATCAAATTGGT+TGG + chr3.2:87739601-87739620 MS.gene40316:intron 15.0%
!! TAGCTAATAATATATCAAAT+TGG + chr3.2:87739597-87739616 MS.gene40316:intron 15.0%
!! TCAAATTTATAAAGAACAAA+AGG - chr3.2:87740984-87741003 None:intergenic 15.0%
!!! AAAATAAGGTGTATATATTT+TGG - chr3.2:87741678-87741697 None:intergenic 15.0%
!!! AGTTTTATTATTTATTTGGA+GGG - chr3.2:87741298-87741317 None:intergenic 15.0%
!!! ATAACTTCATTTTATTCAAT+TGG + chr3.2:87741007-87741026 MS.gene40316:intron 15.0%
!!! GTTTATTTTGTTCAATATTA+GGG + chr3.2:87739040-87739059 MS.gene40316:intron 15.0%
!!! TAGCAGTTTTATTATTTATT+TGG - chr3.2:87741302-87741321 None:intergenic 15.0%
!! AAAAATTAAATAAATGGCAC+TGG - chr3.2:87740276-87740295 None:intergenic 20.0%
!! AGAGAAAGAAAAAAATGATA+TGG - chr3.2:87741241-87741260 None:intergenic 20.0%
!! CAAACGATGTTAATTTATAA+GGG + chr3.2:87740480-87740499 MS.gene40316:intron 20.0%
!! CACAATTGTATGATAAAAAT+AGG + chr3.2:87739255-87739274 MS.gene40316:intron 20.0%
!!! AAGTTTTTATGAAACTCAAA+GGG - chr3.2:87740901-87740920 None:intergenic 20.0%
!!! AGTATAGCTTTATTGATTAT+AGG + chr3.2:87741358-87741377 MS.gene40316:intron 20.0%
!!! ATGATTCCAACATTTTTAAA+TGG + chr3.2:87738923-87738942 MS.gene40316:CDS 20.0%
!!! CAGTTTTATTATTTATTTGG+AGG - chr3.2:87741299-87741318 None:intergenic 20.0%
!!! CTAAGGAATTTTTGTTTTAA+TGG + chr3.2:87740453-87740472 MS.gene40316:intron 20.0%
!!! GGTTTATTTTGTTCAATATT+AGG + chr3.2:87739039-87739058 MS.gene40316:intron 20.0%
!!! TAACATTTTAACATATCTCA+GGG - chr3.2:87739299-87739318 None:intergenic 20.0%
!!! TATTTTAATTGTGATGGAAA+AGG + chr3.2:87739933-87739952 MS.gene40316:intron 20.0%
! AACTAATATACCAAATTGGT+TGG + chr3.2:87739681-87739700 MS.gene40316:intron 25.0%
! AAGAAACTTGTATTCAGATA+TGG + chr3.2:87741326-87741345 MS.gene40316:intron 25.0%
! AATTAAGATTTAGACTGGTA+TGG + chr3.2:87740791-87740810 MS.gene40316:intron 25.0%
! AGAGCTTGATTTAAAAATAG+AGG + chr3.2:87740536-87740555 MS.gene40316:intron 25.0%
! AGCTTGATTTAAAAATAGAG+GGG + chr3.2:87740538-87740557 MS.gene40316:intron 25.0%
! ATCAATAAAGCTATACTACA+TGG - chr3.2:87741355-87741374 None:intergenic 25.0%
! CCAGTAAGTTAATGTTAATT+CGG + chr3.2:87739886-87739905 MS.gene40316:intron 25.0%
! CTTGTATTGAATTGATTAGT+AGG + chr3.2:87738712-87738731 MS.gene40316:intron 25.0%
! GAAAGCAAAAATAATTGACT+AGG - chr3.2:87740962-87740981 None:intergenic 25.0%
! GAGCTTGATTTAAAAATAGA+GGG + chr3.2:87740537-87740556 MS.gene40316:intron 25.0%
! GCAAACGATGTTAATTTATA+AGG + chr3.2:87740479-87740498 MS.gene40316:intron 25.0%
! GTTTCAGTACAAAGAAAATA+AGG - chr3.2:87741692-87741711 None:intergenic 25.0%
! GTTTGATTCAAAAGTTAAAC+TGG - chr3.2:87740313-87740332 None:intergenic 25.0%
! TATAATGAACAACGAAAATC+TGG - chr3.2:87741577-87741596 None:intergenic 25.0%
! TCAATAAAGCTATACTACAT+GGG - chr3.2:87741354-87741373 None:intergenic 25.0%
! TGAGTTTCATAAAAACTTGT+TGG + chr3.2:87740903-87740922 MS.gene40316:intron 25.0%
! TTTATTATTTATTTGGAGGG+AGG - chr3.2:87741295-87741314 None:intergenic 25.0%
! TTTGACATTTCACTTAATGA+TGG + chr3.2:87741504-87741523 MS.gene40316:intron 25.0%
!! CAAGTTTTTATGAAACTCAA+AGG - chr3.2:87740902-87740921 None:intergenic 25.0%
!! TGTTATTTGAAGATATCTCA+GGG + chr3.2:87740568-87740587 MS.gene40316:intron 25.0%
!!! AACATTTTAACATATCTCAG+GGG - chr3.2:87739298-87739317 None:intergenic 25.0%
!!! ATATATTTTGGAATGAGTTG+CGG - chr3.2:87741666-87741685 None:intergenic 25.0%
!!! ATTTCTCACTTATTTTCTGT+TGG + chr3.2:87741759-87741778 MS.gene40316:intron 25.0%
!!! CAGTATTTTTTGGAAGATAA+AGG + chr3.2:87741623-87741642 MS.gene40316:intron 25.0%
!!! CTATCCTCGTTTAATTTTAA+AGG - chr3.2:87740518-87740537 None:intergenic 25.0%
!!! CTTAGCATATCAGTATTTTT+TGG + chr3.2:87741613-87741632 MS.gene40316:intron 25.0%
!!! GGAATTTTTGTTTTAATGGA+TGG + chr3.2:87740457-87740476 MS.gene40316:intron 25.0%
!!! GTAACATTTTAACATATCTC+AGG - chr3.2:87739300-87739319 None:intergenic 25.0%
!!! GTTTAACTTTTGAATCAAAC+CGG + chr3.2:87740313-87740332 MS.gene40316:intron 25.0%
!!! GTTTTTAAAACTATGGTCTA+AGG + chr3.2:87740436-87740455 MS.gene40316:intron 25.0%
!!! TAGACCATAGTTTTAAAAAC+CGG - chr3.2:87740436-87740455 None:intergenic 25.0%
!!! TCATTGAACTTGTTGAAATA+TGG + chr3.2:87739838-87739857 MS.gene40316:intron 25.0%
AACTGAAAAAAGCAAAGTCA+CGG - chr3.2:87739526-87739545 None:intergenic 30.0%
AAGGTAACAGTGTTAAAGTT+GGG - chr3.2:87739352-87739371 None:intergenic 30.0%
AATTAGGGATATTCACAAGT+TGG + chr3.2:87740670-87740689 MS.gene40316:intron 30.0%
ACGATGTTAATTTATAAGGG+AGG + chr3.2:87740483-87740502 MS.gene40316:intron 30.0%
AGATTTGAATTTGAACGAAC+CGG + chr3.2:87738991-87739010 MS.gene40316:intron 30.0%
AGCTGTCCATTTAAAAATGT+TGG - chr3.2:87738932-87738951 None:intergenic 30.0%
ATCAATTATGCTCGATAGAA+TGG + chr3.2:87741462-87741481 MS.gene40316:intron 30.0%
CCGAATTAACATTAACTTAC+TGG - chr3.2:87739889-87739908 None:intergenic 30.0%
CTCTAACTTATCAACATCAT+TGG - chr3.2:87740849-87740868 None:intergenic 30.0%
CTGAAAACTTGTAATCTAGT+TGG + chr3.2:87741726-87741745 MS.gene40316:intron 30.0%
GAGCAACTAATATACCAAAT+TGG + chr3.2:87739677-87739696 MS.gene40316:intron 30.0%
GGTATATTAGTTGCTCAATT+TGG - chr3.2:87739673-87739692 None:intergenic 30.0%
GGTTGAATTAAGATTTAGAC+TGG + chr3.2:87740786-87740805 MS.gene40316:intron 30.0%
TAGAGCTATAATTGCATTGA+TGG + chr3.2:87741156-87741175 MS.gene40316:CDS 30.0%
TAGATATCTTGAAAACTGCT+TGG + chr3.2:87741104-87741123 MS.gene40316:CDS 30.0%
TATAACTTCTTTCCATTCCA+TGG - chr3.2:87741268-87741287 None:intergenic 30.0%
TCAATTATGCTCGATAGAAT+GGG + chr3.2:87741463-87741482 MS.gene40316:intron 30.0%
TCATTATAAAATTTCCCAGC+AGG + chr3.2:87741589-87741608 MS.gene40316:intron 30.0%
TTTATGAAACTCAAAGGGTA+GGG - chr3.2:87740896-87740915 None:intergenic 30.0%
! CTTGTAATAATTTTGCAGAC+CGG + chr3.2:87741070-87741089 MS.gene40316:intron 30.0%
! TAAATGGACAGCTTTAATCA+AGG + chr3.2:87738939-87738958 MS.gene40316:CDS 30.0%
! TCTTTTTGTCTATAACAGCA+AGG - chr3.2:87739371-87739390 None:intergenic 30.0%
! TTTTATGAAACTCAAAGGGT+AGG - chr3.2:87740897-87740916 None:intergenic 30.0%
! TTTTTCTTTCTCTAATGCCA+TGG + chr3.2:87741248-87741267 MS.gene40316:intron 30.0%
!! AAGCAGTTTTCAAGATATCT+AGG - chr3.2:87741105-87741124 None:intergenic 30.0%
!! GTCACCTTTAAAATTAAACG+AGG + chr3.2:87740511-87740530 MS.gene40316:intron 30.0%
!! GTGTTATTTGAAGATATCTC+AGG + chr3.2:87740567-87740586 MS.gene40316:intron 30.0%
!! TTTGTTTGTGTTTTTAACGC+AGG + chr3.2:87738819-87738838 MS.gene40316:intron 30.0%
!!! GTGCTGTATTTTAATTGTGA+TGG + chr3.2:87739927-87739946 MS.gene40316:intron 30.0%
!!! TATATTTTGGAATGAGTTGC+GGG - chr3.2:87741665-87741684 None:intergenic 30.0%
!!! TGACTTTGCTTTTTTCAGTT+TGG + chr3.2:87739526-87739545 MS.gene40316:intron 30.0%
AACAATAAGCCGACCAATTT+GGG + chr3.2:87739793-87739812 MS.gene40316:intron 35.0%
AACCTGAATCACAATTCAGT+GGG - chr3.2:87741201-87741220 None:intergenic 35.0%
AATCATGTGAGGCATATTAG+TGG - chr3.2:87739716-87739735 None:intergenic 35.0%
AATGTTAATTCGGCAACACA+TGG + chr3.2:87739896-87739915 MS.gene40316:intron 35.0%
AATTTCAAATCATCGCAGAC+CGG - chr3.2:87739013-87739032 None:intergenic 35.0%
ACTAATATGCCTCACATGAT+TGG + chr3.2:87739715-87739734 MS.gene40316:intron 35.0%
ACTGAAAAAAGCAAAGTCAC+GGG - chr3.2:87739525-87739544 None:intergenic 35.0%
AGGTAACAGTGTTAAAGTTG+GGG - chr3.2:87739351-87739370 None:intergenic 35.0%
AGTGAAATGTCAAATCCTAG+TGG - chr3.2:87741498-87741517 None:intergenic 35.0%
ATACCAAATTGGTTGGAACA+TGG + chr3.2:87739688-87739707 MS.gene40316:intron 35.0%
ATTATTTATTTGGAGGGAGG+AGG - chr3.2:87741292-87741311 None:intergenic 35.0%
CAAGGTAACAGTGTTAAAGT+TGG - chr3.2:87739353-87739372 None:intergenic 35.0%
CATGTTGCATGTGATTAGAT+CGG + chr3.2:87740727-87740746 MS.gene40316:intron 35.0%
CTAATATGCCTCACATGATT+GGG + chr3.2:87739716-87739735 MS.gene40316:intron 35.0%
CTAATCACATGCAACATGTT+TGG - chr3.2:87740725-87740744 None:intergenic 35.0%
GAACCATCAGTGTGAAATTA+GGG + chr3.2:87740655-87740674 MS.gene40316:intron 35.0%
GAGTTAGGGTTATGCAAAAT+TGG + chr3.2:87738752-87738771 MS.gene40316:intron 35.0%
TAAAGTTCACCCAAATTGGT+CGG - chr3.2:87739805-87739824 None:intergenic 35.0%
TAACAATAAGCCGACCAATT+TGG + chr3.2:87739792-87739811 MS.gene40316:intron 35.0%
TAATATGCCTCACATGATTG+GGG + chr3.2:87739717-87739736 MS.gene40316:intron 35.0%
TATCCCTAATTTCACACTGA+TGG - chr3.2:87740661-87740680 None:intergenic 35.0%
TGAACCATCAGTGTGAAATT+AGG + chr3.2:87740654-87740673 MS.gene40316:intron 35.0%
TGTTCACATGAAGAGTGAAT+GGG + chr3.2:87740628-87740647 MS.gene40316:intron 35.0%
TTAGTCAAAAAGCGAACTTG+AGG - chr3.2:87739142-87739161 None:intergenic 35.0%
TTATGAAACTCAAAGGGTAG+GGG - chr3.2:87740895-87740914 None:intergenic 35.0%
TTCAACCGTTTGATTCAGAT+TGG - chr3.2:87740773-87740792 None:intergenic 35.0%
TTGTTCACATGAAGAGTGAA+TGG + chr3.2:87740627-87740646 MS.gene40316:intron 35.0%
! AGCAAGCTTAGCATTGAAAT+TGG + chr3.2:87738795-87738814 MS.gene40316:intron 35.0%
! CGATGATTTGAAATTTGCTC+TGG + chr3.2:87739018-87739037 MS.gene40316:intron 35.0%
! GGTCTATTTTCATCTTGGTT+TGG + chr3.2:87739622-87739641 MS.gene40316:intron 35.0%
! TGGTTTTCCCATTATAGAGA+GGG - chr3.2:87740829-87740848 None:intergenic 35.0%
! TGTTTGTTGGTTAGGAGTTA+GGG + chr3.2:87738738-87738757 MS.gene40316:intron 35.0%
! TTGTTTGTTGGTTAGGAGTT+AGG + chr3.2:87738737-87738756 MS.gene40316:intron 35.0%
!! GATTAGTAGGTCTTGTTTGT+TGG + chr3.2:87738725-87738744 MS.gene40316:intron 35.0%
!! TCTCACTTATTTTCTGTTGG+CGG + chr3.2:87741762-87741781 MS.gene40316:intron 35.0%
!! TTGGTTTTCCCATTATAGAG+AGG - chr3.2:87740830-87740849 None:intergenic 35.0%
!! TTGTTTCGAGTTTGTGGTAT+AGG + chr3.2:87740694-87740713 MS.gene40316:intron 35.0%
!!! AATGGTGTTTTTCTGAAGTC+TGG + chr3.2:87739481-87739500 MS.gene40316:intron 35.0%
!!! CATAGTTTTAAAAACCGGAC+AGG - chr3.2:87740431-87740450 None:intergenic 35.0%
!!! CTGTCCGGTTTTTAAAACTA+TGG + chr3.2:87740429-87740448 MS.gene40316:intron 35.0%
!!! TATTTTCATCTTGGTTTGGC+TGG + chr3.2:87739626-87739645 MS.gene40316:intron 35.0%
!!! TGGTTGGTCTATTTTCATCT+TGG + chr3.2:87739617-87739636 MS.gene40316:intron 35.0%
ACTTTACATCCTTAACCGCT+GGG - chr3.2:87740219-87740238 None:intergenic 40.0%
AGCGTAAAGTTCACCCAAAT+TGG - chr3.2:87739809-87739828 None:intergenic 40.0%
ATAGGCGATCAGATTGAAAC+TGG + chr3.2:87741376-87741395 MS.gene40316:intron 40.0%
ATCTGATAGTAACCTGCAGA+AGG - chr3.2:87739204-87739223 None:intergenic 40.0%
ATTGTTAACCCGACAACAAG+TGG - chr3.2:87739779-87739798 None:intergenic 40.0%
CAACCTGAATCACAATTCAG+TGG - chr3.2:87741202-87741221 None:intergenic 40.0%
CACGCAGTTAAAGAACAGAA+GGG - chr3.2:87741530-87741549 None:intergenic 40.0%
CCATTATTACCCTCAAGCAT+AGG - chr3.2:87739466-87739485 None:intergenic 40.0%
CCTATGCTTGAGGGTAATAA+TGG + chr3.2:87739463-87739482 MS.gene40316:intron 40.0%
CGTACCTTAAAATGCACGTT+GGG - chr3.2:87739175-87739194 None:intergenic 40.0%
CTGAAAAAAGCAAAGTCACG+GGG - chr3.2:87739524-87739543 None:intergenic 40.0%
CTTGCAGCAATGCCAAAAAA+AGG + chr3.2:87741852-87741871 MS.gene40316:CDS 40.0%
CTTTCTCTAATGCCATGGAA+TGG + chr3.2:87741253-87741272 MS.gene40316:intron 40.0%
GACCAGATATGCATATGAAC+CGG - chr3.2:87740364-87740383 None:intergenic 40.0%
GATATCTAGGCAAATCTCTC+CGG - chr3.2:87741092-87741111 None:intergenic 40.0%
GGTAACAGTGTTAAAGTTGG+GGG - chr3.2:87739350-87739369 None:intergenic 40.0%
GGTTGTAAAGGATAATGCTC+TGG - chr3.2:87739118-87739137 None:intergenic 40.0%
GTACCTTAAAATGCACGTTG+GGG - chr3.2:87739174-87739193 None:intergenic 40.0%
TACTTTACATCCTTAACCGC+TGG - chr3.2:87740220-87740239 None:intergenic 40.0%
TATGAAACTCAAAGGGTAGG+GGG - chr3.2:87740894-87740913 None:intergenic 40.0%
TCAGATTGAAACTGGACTTG+AGG + chr3.2:87741384-87741403 MS.gene40316:intron 40.0%
TCCAGCCAATCTGAATCAAA+CGG + chr3.2:87740765-87740784 MS.gene40316:intron 40.0%
TCGTACCTTAAAATGCACGT+TGG - chr3.2:87739176-87739195 None:intergenic 40.0%
TGGTGTCTCATCTATGAAAC+TGG + chr3.2:87739422-87739441 MS.gene40316:intron 40.0%
TGTCTGTCGTCTTCTTCATT+TGG + chr3.2:87739402-87739421 MS.gene40316:intron 40.0%
TTGACTGCCCTCTCTATAAT+GGG + chr3.2:87740819-87740838 MS.gene40316:intron 40.0%
! AACCGGTTCATATGCATATC+TGG + chr3.2:87740359-87740378 MS.gene40316:intron 40.0%
! GTTTTTAACGCAGGCATCAA+GGG + chr3.2:87738828-87738847 MS.gene40316:intron 40.0%
! TAAATGGCACTGGATCTCTA+AGG - chr3.2:87740266-87740285 None:intergenic 40.0%
! TCGCAAACGAGTTGAATATC+AGG - chr3.2:87738904-87738923 None:intergenic 40.0%
! TTGAATCAAACCGGTTCAAC+CGG + chr3.2:87740322-87740341 MS.gene40316:intron 40.0%
!! GTAGGTCTTGTTTGTTGGTT+AGG + chr3.2:87738730-87738749 MS.gene40316:intron 40.0%
!! TGTTTTTAACGCAGGCATCA+AGG + chr3.2:87738827-87738846 MS.gene40316:intron 40.0%
!! TTTCGAGTTTGTGGTATAGG+AGG + chr3.2:87740697-87740716 MS.gene40316:intron 40.0%
!!! ACGTGCATTTTAAGGTACGA+TGG + chr3.2:87739176-87739195 MS.gene40316:intron 40.0%
AACAAGTGGCATACAGGATG+CGG - chr3.2:87739765-87739784 None:intergenic 45.0%
AACAGATTGCAGAGTCCATG+CGG - chr3.2:87741134-87741153 None:intergenic 45.0%
ACCGTTTGATTCAGATTGGC+TGG - chr3.2:87740769-87740788 None:intergenic 45.0%
ACTGATATGCTAAGACCTGC+TGG - chr3.2:87741607-87741626 None:intergenic 45.0%
AGCCCACTGAATTGTGATTC+AGG + chr3.2:87741196-87741215 MS.gene40316:CDS 45.0%
CCATGGCAAGAATGTACACT+AGG + chr3.2:87741829-87741848 MS.gene40316:CDS 45.0%
CCTAAAGCTCCTATGCTTGA+GGG + chr3.2:87739454-87739473 MS.gene40316:intron 45.0%
CCTAGTGTACATTCTTGCCA+TGG - chr3.2:87741832-87741851 None:intergenic 45.0%
CCTTCAGAGACTCCATATGA+CGG + chr3.2:87739064-87739083 MS.gene40316:CDS 45.0%
CGAACTTGAGGAGGTTGTAA+AGG - chr3.2:87739130-87739149 None:intergenic 45.0%
CGGTTGAACTGGAAATCAAC+CGG + chr3.2:87740342-87740361 MS.gene40316:intron 45.0%
CTACGTTCAGGTGATGTTAG+AGG + chr3.2:87741798-87741817 MS.gene40316:CDS 45.0%
CTCAATACCCCAATCATGTG+AGG - chr3.2:87739727-87739746 None:intergenic 45.0%
CTGATATGCTAAGACCTGCT+GGG - chr3.2:87741606-87741625 None:intergenic 45.0%
CTGGAACAGAAAATGCAAGC+TGG - chr3.2:87739099-87739118 None:intergenic 45.0%
CTTCAGAGACTCCATATGAC+GGG + chr3.2:87739065-87739084 MS.gene40316:CDS 45.0%
CTTGACTGCCCTCTCTATAA+TGG + chr3.2:87740818-87740837 MS.gene40316:intron 45.0%
GCACGCAGTTAAAGAACAGA+AGG - chr3.2:87741531-87741550 None:intergenic 45.0%
GCAGGTAATCTTCTACGTTC+AGG + chr3.2:87741786-87741805 MS.gene40316:intron 45.0%
GTCAAAAAGCGAACTTGAGG+AGG - chr3.2:87739139-87739158 None:intergenic 45.0%
GTGCCATGTTCCAACCAATT+TGG - chr3.2:87739694-87739713 None:intergenic 45.0%
GTGTTAAAGTTGGGGGTCTT+TGG - chr3.2:87739343-87739362 None:intergenic 45.0%
TATGCTCGATAGAATGGGTG+TGG + chr3.2:87741468-87741487 MS.gene40316:intron 45.0%
TCGGCAACACATGGTAATTC+AGG + chr3.2:87739905-87739924 MS.gene40316:intron 45.0%
TGTTAGAGGCTATCAGTCCA+TGG + chr3.2:87741812-87741831 MS.gene40316:CDS 45.0%
TTCAGAGACTCCATATGACG+GGG + chr3.2:87739066-87739085 MS.gene40316:CDS 45.0%
! AAGATTCCACGTTTTCCCAG+CGG + chr3.2:87740201-87740220 MS.gene40316:intron 45.0%
! CGGTTGATTTCCAGTTCAAC+CGG - chr3.2:87740344-87740363 None:intergenic 45.0%
! TCACCCCAACGTGCATTTTA+AGG + chr3.2:87739168-87739187 MS.gene40316:CDS 45.0%
! TTATTTTCTGTTGGCGGTGC+AGG + chr3.2:87741768-87741787 MS.gene40316:intron 45.0%
!! GTTGGCTTGTTTCGAGTTTG+TGG + chr3.2:87740688-87740707 MS.gene40316:intron 45.0%
!! TCCTGTATGCCACTTGTTGT+CGG + chr3.2:87739767-87739786 MS.gene40316:intron 45.0%
!! TGGGGTATTGAGCCATTATC+TGG + chr3.2:87739735-87739754 MS.gene40316:intron 45.0%
ACAGATTGCAGAGTCCATGC+GGG - chr3.2:87741133-87741152 None:intergenic 50.0%
ATCTGGTCCAACACCGTTAC+TGG + chr3.2:87740376-87740395 MS.gene40316:intron 50.0%
CCCTCAAGCATAGGAGCTTT+AGG - chr3.2:87739457-87739476 None:intergenic 50.0%
CCGTCATATGGAGTCTCTGA+AGG - chr3.2:87739067-87739086 None:intergenic 50.0%
CTGAAGTCTGGTGTGAGTGA+TGG + chr3.2:87739493-87739512 MS.gene40316:intron 50.0%
GCCTAAAGCTCCTATGCTTG+AGG + chr3.2:87739453-87739472 MS.gene40316:intron 50.0%
GGATGCGGACATCCAGATAA+TGG - chr3.2:87739750-87739769 None:intergenic 50.0%
GGGGTCTTTGGCAAACTAGA+GGG - chr3.2:87739331-87739350 None:intergenic 50.0%
GGGTCTTTGGCAAACTAGAG+GGG - chr3.2:87739330-87739349 None:intergenic 50.0%
TCAGAGACTCCATATGACGG+GGG + chr3.2:87739067-87739086 MS.gene40316:CDS 50.0%
TCCAGTTCAACCGGTTGAAC+CGG - chr3.2:87740335-87740354 None:intergenic 50.0%
TGGAAAACACCCCCGTCATA+TGG - chr3.2:87739079-87739098 None:intergenic 50.0%
!! CCTGTATGCCACTTGTTGTC+GGG + chr3.2:87739768-87739787 MS.gene40316:intron 50.0%
!! TCACAATTCAGTGGGCTGTC+AGG - chr3.2:87741193-87741212 None:intergenic 50.0%
AAAAACCGGACAGGCCGAAC+CGG - chr3.2:87740422-87740441 None:intergenic 55.0%
AATGGGTGTGGTGGTCCACT+AGG + chr3.2:87741480-87741499 MS.gene40316:intron 55.0%
ATCAAGGGCGAGGCTGTTCA+AGG + chr3.2:87738843-87738862 MS.gene40316:CDS 55.0%
CAGATTGCAGAGTCCATGCG+GGG - chr3.2:87741132-87741151 None:intergenic 55.0%
CCCGACAACAAGTGGCATAC+AGG - chr3.2:87739771-87739790 None:intergenic 55.0%
CCTTAACCGCTGGGAAAACG+TGG - chr3.2:87740210-87740229 None:intergenic 55.0%
GCTCGATAGAATGGGTGTGG+TGG + chr3.2:87741471-87741490 MS.gene40316:intron 55.0%
GGGGGTCTTTGGCAAACTAG+AGG - chr3.2:87739332-87739351 None:intergenic 55.0%
GGTACGATGGATCCTTCTGC+AGG + chr3.2:87739189-87739208 MS.gene40316:intron 55.0%
GTCCAACACCGTTACTGGAC+CGG + chr3.2:87740381-87740400 MS.gene40316:intron 55.0%
! AAGGGTAGGGGGCGTAATAG+TGG - chr3.2:87740883-87740902 None:intergenic 55.0%
! ACCGGTTCAACCGGTTGAAC+TGG + chr3.2:87740331-87740350 MS.gene40316:intron 55.0%
! CATGGGTCTGGTTTCCGGTT+CGG + chr3.2:87740405-87740424 MS.gene40316:intron 55.0%
! CCACGTTTTCCCAGCGGTTA+AGG + chr3.2:87740207-87740226 MS.gene40316:intron 55.0%
!! TTCAGTGGGCTGTCAGGTTC+TGG - chr3.2:87741187-87741206 None:intergenic 55.0%
AAACTGCTTGGAGCCCCGCA+TGG + chr3.2:87741116-87741135 MS.gene40316:CDS 60.0%
ACCCATGGCCGGTCCAGTAA+CGG - chr3.2:87740392-87740411 None:intergenic 60.0%
ACCGTTACTGGACCGGCCAT+GGG + chr3.2:87740388-87740407 MS.gene40316:intron 60.0%
CGAACCGGAAACCAGACCCA+TGG - chr3.2:87740407-87740426 None:intergenic 60.0%
TAACGCAGGCATCAAGGGCG+AGG + chr3.2:87738833-87738852 MS.gene40316:intron 60.0%
CACCGTTACTGGACCGGCCA+TGG + chr3.2:87740387-87740406 MS.gene40316:intron 65.0%
CCGGAAACCAGACCCATGGC+CGG - chr3.2:87740403-87740422 None:intergenic 65.0%
GGCCGGTCCAGTAACGGTGT+TGG - chr3.2:87740386-87740405 None:intergenic 65.0%
TACTGGACCGGCCATGGGTC+TGG + chr3.2:87740393-87740412 MS.gene40316:intron 65.0%
! CCGGCCATGGGTCTGGTTTC+CGG + chr3.2:87740400-87740419 MS.gene40316:intron 65.0%
!! GGTTTCCGGTTCGGCCTGTC+CGG + chr3.2:87740414-87740433 MS.gene40316:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 87738664 87741878 87738664 ID=MS.gene40316
chr3.2 mRNA 87738664 87741878 87738664 ID=MS.gene40316.t1;Parent=MS.gene40316
chr3.2 exon 87738664 87738669 87738664 ID=MS.gene40316.t1.exon1;Parent=MS.gene40316.t1
chr3.2 CDS 87738664 87738669 87738664 ID=cds.MS.gene40316.t1;Parent=MS.gene40316.t1
chr3.2 exon 87738841 87738960 87738841 ID=MS.gene40316.t1.exon2;Parent=MS.gene40316.t1
chr3.2 CDS 87738841 87738960 87738841 ID=cds.MS.gene40316.t1;Parent=MS.gene40316.t1
chr3.2 exon 87739061 87739189 87739061 ID=MS.gene40316.t1.exon3;Parent=MS.gene40316.t1
chr3.2 CDS 87739061 87739189 87739061 ID=cds.MS.gene40316.t1;Parent=MS.gene40316.t1
chr3.2 exon 87741088 87741217 87741088 ID=MS.gene40316.t1.exon4;Parent=MS.gene40316.t1
chr3.2 CDS 87741088 87741217 87741088 ID=cds.MS.gene40316.t1;Parent=MS.gene40316.t1
chr3.2 exon 87741790 87741878 87741790 ID=MS.gene40316.t1.exon5;Parent=MS.gene40316.t1
chr3.2 CDS 87741790 87741878 87741790 ID=cds.MS.gene40316.t1;Parent=MS.gene40316.t1
Gene Sequence

>MS.gene40316

ATGCAGGTTCGTTCGTTAATGGATTCAATTCTTAGTGTCTTTAATTAACTTGTATTGAATTGATTAGTAGGTCTTGTTTGTTGGTTAGGAGTTAGGGTTATGCAAAATTGGATTTGTGTTATTGTAATTGTAGCAAGCTTAGCATTGAAATTGGATTTGTTTGTGTTTTTAACGCAGGCATCAAGGGCGAGGCTGTTCAAGGAGTACAAAGAAGTGCAACGAGAGAAGACAGCTGATCCTGATATTCAACTCGTTTGCGATGATTCCAACATTTTTAAATGGACAGCTTTAATCAAGGTATAGTAGCTAATAATCTCGAATTTTAAAAGATTTGAATTTGAACGAACCGGTCTGCGATGATTTGAAATTTGCTCTGGTTTATTTTGTTCAATATTAGGGACCTTCAGAGACTCCATATGACGGGGGTGTTTTCCAGCTTGCATTTTCTGTTCCAGAGCATTATCCTTTACAACCTCCTCAAGTTCGCTTTTTGACTAAAATATTTCACCCCAACGTGCATTTTAAGGTACGATGGATCCTTCTGCAGGTTACTATCAGATTGTTGTTTGCTGATGCTTTTCACTTTTAGAACACAATTGTATGATAAAAATAGGGTAAATTGCATTACATTCCCCTGAGATATGTTAAAATGTTACACATACACCCCTCTAGTTTGCCAAAGACCCCCAACTTTAACACTGTTACCTTGCTGTTATAGACAAAAAGAGAAAAAGTTTTTGTCTGTCGTCTTCTTCATTTGGTGTCTCATCTATGAAACTGGCTTTCTCAGCCTAAAGCTCCTATGCTTGAGGGTAATAATGGTGTTTTTCTGAAGTCTGGTGTGAGTGATGGATACACCCCGTGACTTTGCTTTTTTCAGTTTGGTGTTTGACTTCATATATTTTGTCTACAAAATCAAGAACACGATGACAATAGCTAATAATATATCAAATTGGTTGGTCTATTTTCATCTTGGTTTGGCTGGCAAAACTTAATTATCTCTATGCCAAATTGAGCAACTAATATACCAAATTGGTTGGAACATGGCACCACTAATATGCCTCACATGATTGGGGTATTGAGCCATTATCTGGATGTCCGCATCCTGTATGCCACTTGTTGTCGGGTTAACAATAAGCCGACCAATTTGGGTGAACTTTACGCTCTGTCAATTTCATTGAACTTGTTGAAATATGGATTTTAATTAGCAAAATAAAATGTACCAGTAAGTTAATGTTAATTCGGCAACACATGGTAATTCAGGTGCTGTATTTTAATTGTGATGGAAAAGGTAGATTTATATTAAAATATAAATCGTTACAAATTTATTACTTATAAATACATATACTAAATTTATTTTTAATTTGATAAGTCTTGAAAGTTTAAGTTATAACAATTTAGTTTATAGAAGTTAAATGTTAGTATATACTTTTTTTGAAAAAAGTAGTAACATACGTATTAAAGCAAGTAATCTAACACAAGAAAACTAGTAACATATATATATATATATATTTACAAGTAGAAGTGATAATTTTGCAAGATTCCACGTTTTCCCAGCGGTTAAGGATGTAAAGTAGTACAAGTGTCTCAAGTTCTACTCCTTAGAGATCCAGTGCCATTTATTTAATTTTTGATGTAACTACAAACCAGTTTAACTTTTGAATCAAACCGGTTCAACCGGTTGAACTGGAAATCAACCGGTTCATATGCATATCTGGTCCAACACCGTTACTGGACCGGCCATGGGTCTGGTTTCCGGTTCGGCCTGTCCGGTTTTTAAAACTATGGTCTAAGGAATTTTTGTTTTAATGGATGGCAAACGATGTTAATTTATAAGGGAGGCAACTGTCACCTTTAAAATTAAACGAGGATAGAGCTTGATTTAAAAATAGAGGGGATGTTTGTGTTATTTGAAGATATCTCAGGGAAGTCATTGTAATTTGCACTTAAAAATATCTAGTAGTTGTTCACATGAAGAGTGAATGGGATCTGAACCATCAGTGTGAAATTAGGGATATTCACAAGTTGGCTTGTTTCGAGTTTGTGGTATAGGAGGATCCAAACATGTTGCATGTGATTAGATCGGTTTTAATTTTTTTTCTCCAGCCAATCTGAATCAAACGGTTGAATTAAGATTTAGACTGGTATGGTTGTCTTGACTGCCCTCTCTATAATGGGAAAACCAATGATGTTGATAAGTTAGAGACTAGTAATTTCCACTATTACGCCCCCTACCCTTTGAGTTTCATAAAAACTTGTTGGAAACTGACAACAATATTGATTTGAAGTTGAATTCCTAGTCAATTATTTTTGCTTTCCTTTTGTTCTTTATAAATTTGATAGATAACTTCATTTTATTCAATTGGATTTGTTTTTCTTGACATTTTTTCATGAATACTTTTTAATCTTGTAATAATTTTGCAGACCGGAGAGATTTGCCTAGATATCTTGAAAACTGCTTGGAGCCCCGCATGGACTCTGCAATCTGTTTGTAGAGCTATAATTGCATTGATGGCTCATCCAGAACCTGACAGCCCACTGAATTGTGATTCAGGTTGTTAAACTTTCTCTGTTCCATATCATTTTTTTCTTTCTCTAATGCCATGGAATGGAAAGAAGTTATATCCTCCTCCCTCCAAATAAATAATAAAACTGCTAGAAAAAGAAACTTGTATTCAGATATGGATCCCATGTAGTATAGCTTTATTGATTATAGGCGATCAGATTGAAACTGGACTTGAGGATTTAGTAACTGCAAAAGATTTGCCAATTAACTATTTTTAAACATCATCATGCTTATCAATTATGCTCGATAGAATGGGTGTGGTGGTCCACTAGGATTTGACATTTCACTTAATGATGGCCCTTCTGTTCTTTAACTGCGTGCTATTTGAATTTATATGCATGCTTCCAGATTTTCGTTGTTCATTATAAAATTTCCCAGCAGGTCTTAGCATATCAGTATTTTTTGGAAGATAAAGGACTTCAAATTCTTAAGCCCGCAACTCATTCCAAAATATATACACCTTATTTTCTTTGTACTGAAACAAAAATAATGTGAACTGAAAACTTGTAATCTAGTTGGAAAGAATGTCATTTCTCACTTATTTTCTGTTGGCGGTGCAGGTAATCTTCTACGTTCAGGTGATGTTAGAGGCTATCAGTCCATGGCAAGAATGTACACTAGGCTTGCAGCAATGCCAAAAAAAGGCTGA
Protein sequence

>MS.gene40316.t1

MQASRARLFKEYKEVQREKTADPDIQLVCDDSNIFKWTALIKGPSETPYDGGVFQLAFSVPEHYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKTAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG