Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20202.t1 | RHN43517.1 | 99.4 | 669 | 4 | 0 | 1 | 669 | 1 | 669 | 0.00E+00 | 1251.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20202.t1 | Q03684 | 92.2 | 645 | 49 | 1 | 9 | 653 | 11 | 654 | 0.0e+00 | 1162.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20202.t1 | A0A396GXZ8 | 99.4 | 669 | 4 | 0 | 1 | 669 | 1 | 669 | 0.0e+00 | 1251.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene20202 | 0.820372 | 7.10E-53 | -1.69E-46 |
| MS.gene051120 | MS.gene20202 | 0.813558 | 2.41E-51 | -1.69E-46 |
| MS.gene051850 | MS.gene20202 | 0.800847 | 1.19E-48 | -1.69E-46 |
| MS.gene051885 | MS.gene20202 | 0.813333 | 2.70E-51 | -1.69E-46 |
| MS.gene052345 | MS.gene20202 | 0.833306 | 5.75E-56 | -1.69E-46 |
| MS.gene052985 | MS.gene20202 | 0.822386 | 2.44E-53 | -1.69E-46 |
| MS.gene053118 | MS.gene20202 | 0.81956 | 1.09E-52 | -1.69E-46 |
| MS.gene053143 | MS.gene20202 | 0.803018 | 4.26E-49 | -1.69E-46 |
| MS.gene05880 | MS.gene20202 | 0.822525 | 2.26E-53 | -1.69E-46 |
| MS.gene06113 | MS.gene20202 | 0.906019 | 2.32E-80 | -1.69E-46 |
| MS.gene06117 | MS.gene20202 | 0.994453 | 2.23E-207 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20202.t1 | MTR_8g099945 | 99.253 | 669 | 5 | 0 | 1 | 669 | 1 | 669 | 0.0 | 1343 |
| MS.gene20202.t1 | MTR_8g099795 | 96.285 | 646 | 23 | 1 | 1 | 646 | 2 | 646 | 0.0 | 1231 |
| MS.gene20202.t1 | MTR_7g099680 | 64.921 | 630 | 214 | 5 | 36 | 661 | 7 | 633 | 0.0 | 837 |
| MS.gene20202.t1 | MTR_4g063720 | 64.263 | 638 | 211 | 5 | 36 | 658 | 7 | 642 | 0.0 | 831 |
| MS.gene20202.t1 | MTR_4g063710 | 65.961 | 614 | 203 | 4 | 36 | 645 | 7 | 618 | 0.0 | 829 |
| MS.gene20202.t1 | MTR_7g024390 | 65.472 | 614 | 206 | 4 | 36 | 645 | 7 | 618 | 0.0 | 828 |
| MS.gene20202.t1 | MTR_7g024580 | 64.038 | 634 | 215 | 5 | 36 | 665 | 7 | 631 | 0.0 | 827 |
| MS.gene20202.t1 | MTR_4g130540 | 64.423 | 624 | 214 | 5 | 33 | 652 | 3 | 622 | 0.0 | 823 |
| MS.gene20202.t1 | MTR_2g017730 | 54.992 | 611 | 249 | 6 | 33 | 633 | 3 | 597 | 0.0 | 667 |
| MS.gene20202.t1 | MTR_6g033760 | 54.125 | 606 | 271 | 5 | 39 | 640 | 10 | 612 | 0.0 | 662 |
| MS.gene20202.t1 | MTR_6g033850 | 53.542 | 607 | 275 | 5 | 39 | 641 | 10 | 613 | 0.0 | 652 |
| MS.gene20202.t1 | MTR_7g026030 | 54.125 | 606 | 267 | 8 | 36 | 635 | 7 | 607 | 0.0 | 647 |
| MS.gene20202.t1 | MTR_7g021440 | 54.486 | 613 | 269 | 7 | 36 | 642 | 7 | 615 | 0.0 | 640 |
| MS.gene20202.t1 | MTR_2g038260 | 55.628 | 613 | 259 | 9 | 36 | 640 | 7 | 614 | 0.0 | 639 |
| MS.gene20202.t1 | MTR_7g451380 | 53.268 | 612 | 276 | 7 | 36 | 640 | 7 | 615 | 0.0 | 636 |
| MS.gene20202.t1 | MTR_7g025820 | 54.223 | 592 | 261 | 7 | 36 | 621 | 7 | 594 | 0.0 | 632 |
| MS.gene20202.t1 | MTR_5g066800 | 52.006 | 623 | 278 | 8 | 36 | 641 | 7 | 625 | 0.0 | 630 |
| MS.gene20202.t1 | MTR_2g032550 | 53.431 | 612 | 275 | 7 | 36 | 640 | 8 | 616 | 0.0 | 630 |
| MS.gene20202.t1 | MTR_7g025720 | 52.805 | 606 | 275 | 8 | 36 | 635 | 7 | 607 | 0.0 | 624 |
| MS.gene20202.t1 | MTR_6g033955 | 51.535 | 619 | 288 | 6 | 39 | 648 | 10 | 625 | 0.0 | 622 |
| MS.gene20202.t1 | MTR_7g025790 | 52.815 | 604 | 274 | 8 | 36 | 633 | 7 | 605 | 0.0 | 622 |
| MS.gene20202.t1 | MTR_6g033820 | 50.889 | 619 | 292 | 6 | 39 | 648 | 10 | 625 | 0.0 | 621 |
| MS.gene20202.t1 | MTR_7g025760 | 51.320 | 606 | 285 | 7 | 36 | 635 | 7 | 608 | 0.0 | 619 |
| MS.gene20202.t1 | MTR_7g025620 | 52.554 | 607 | 275 | 9 | 36 | 635 | 7 | 607 | 0.0 | 619 |
| MS.gene20202.t1 | MTR_7g026170 | 53.659 | 615 | 270 | 11 | 36 | 641 | 7 | 615 | 0.0 | 618 |
| MS.gene20202.t1 | MTR_6g033870 | 51.774 | 620 | 286 | 7 | 39 | 648 | 11 | 627 | 0.0 | 618 |
| MS.gene20202.t1 | MTR_7g024030 | 51.895 | 607 | 281 | 8 | 36 | 636 | 7 | 608 | 0.0 | 615 |
| MS.gene20202.t1 | MTR_7g025770 | 52.224 | 607 | 279 | 8 | 36 | 635 | 7 | 609 | 0.0 | 613 |
| MS.gene20202.t1 | MTR_2g022050 | 52.874 | 609 | 277 | 7 | 39 | 640 | 10 | 615 | 0.0 | 612 |
| MS.gene20202.t1 | MTR_8g032650 | 50.553 | 633 | 295 | 9 | 36 | 662 | 7 | 627 | 0.0 | 609 |
| MS.gene20202.t1 | MTR_7g029415 | 52.960 | 625 | 280 | 11 | 25 | 641 | 3 | 621 | 0.0 | 609 |
| MS.gene20202.t1 | MTR_7g026110 | 51.555 | 611 | 284 | 8 | 36 | 640 | 7 | 611 | 0.0 | 608 |
| MS.gene20202.t1 | MTR_7g026090 | 51.882 | 611 | 282 | 7 | 36 | 640 | 7 | 611 | 0.0 | 608 |
| MS.gene20202.t1 | MTR_7g011590 | 53.030 | 594 | 262 | 8 | 36 | 626 | 7 | 586 | 0.0 | 605 |
| MS.gene20202.t1 | MTR_4g079590 | 51.405 | 605 | 283 | 8 | 36 | 633 | 7 | 607 | 0.0 | 603 |
| MS.gene20202.t1 | MTR_2g437440 | 50.654 | 612 | 274 | 8 | 36 | 640 | 7 | 597 | 0.0 | 599 |
| MS.gene20202.t1 | MTR_7g078190 | 51.967 | 610 | 278 | 10 | 36 | 635 | 7 | 611 | 0.0 | 597 |
| MS.gene20202.t1 | MTR_7g025740 | 49.756 | 615 | 289 | 10 | 36 | 635 | 7 | 616 | 0.0 | 596 |
| MS.gene20202.t1 | MTR_8g103930 | 50.565 | 619 | 269 | 10 | 39 | 640 | 12 | 610 | 0.0 | 585 |
| MS.gene20202.t1 | MTR_2g010020 | 53.276 | 580 | 244 | 10 | 38 | 609 | 57 | 617 | 0.0 | 583 |
| MS.gene20202.t1 | MTR_2g010020 | 53.276 | 580 | 244 | 10 | 38 | 609 | 56 | 616 | 0.0 | 583 |
| MS.gene20202.t1 | MTR_4g092920 | 53.276 | 580 | 245 | 10 | 38 | 609 | 53 | 614 | 0.0 | 580 |
| MS.gene20202.t1 | MTR_7g025630 | 49.751 | 603 | 284 | 9 | 36 | 635 | 7 | 593 | 0.0 | 578 |
| MS.gene20202.t1 | MTR_7g078210 | 51.530 | 621 | 287 | 10 | 36 | 647 | 7 | 622 | 0.0 | 578 |
| MS.gene20202.t1 | MTR_7g074460 | 50.495 | 606 | 272 | 8 | 36 | 635 | 7 | 590 | 0.0 | 576 |
| MS.gene20202.t1 | MTR_2g038270 | 48.714 | 622 | 297 | 11 | 36 | 640 | 7 | 623 | 0.0 | 573 |
| MS.gene20202.t1 | MTR_4g027145 | 49.920 | 627 | 287 | 12 | 36 | 641 | 7 | 627 | 0.0 | 570 |
| MS.gene20202.t1 | MTR_7g026130 | 51.129 | 620 | 285 | 11 | 36 | 643 | 7 | 620 | 0.0 | 569 |
| MS.gene20202.t1 | MTR_2g032580 | 49.673 | 612 | 267 | 8 | 36 | 640 | 7 | 584 | 0.0 | 569 |
| MS.gene20202.t1 | MTR_1g017130 | 50.247 | 607 | 251 | 11 | 36 | 635 | 7 | 569 | 0.0 | 566 |
| MS.gene20202.t1 | MTR_7g026140 | 51.060 | 613 | 271 | 11 | 36 | 640 | 7 | 598 | 0.0 | 565 |
| MS.gene20202.t1 | MTR_7g025260 | 48.586 | 601 | 292 | 8 | 68 | 662 | 11 | 600 | 0.0 | 553 |
| MS.gene20202.t1 | MTR_2g005690 | 48.892 | 632 | 285 | 12 | 38 | 658 | 71 | 675 | 0.0 | 547 |
| MS.gene20202.t1 | MTR_6g033800 | 51.613 | 527 | 246 | 6 | 119 | 641 | 1 | 522 | 0.0 | 535 |
| MS.gene20202.t1 | MTR_7g451360 | 47.869 | 610 | 253 | 10 | 36 | 640 | 7 | 556 | 0.0 | 532 |
| MS.gene20202.t1 | MTR_7g007000 | 47.068 | 614 | 268 | 11 | 36 | 640 | 7 | 572 | 1.98e-175 | 513 |
| MS.gene20202.t1 | MTR_4g092920 | 54.016 | 498 | 204 | 9 | 119 | 609 | 1 | 480 | 1.86e-172 | 503 |
| MS.gene20202.t1 | MTR_7g035155 | 46.982 | 613 | 260 | 13 | 36 | 641 | 7 | 561 | 1.69e-168 | 494 |
| MS.gene20202.t1 | MTR_1g041565 | 46.281 | 605 | 242 | 12 | 39 | 635 | 6 | 535 | 2.26e-164 | 483 |
| MS.gene20202.t1 | MTR_2g040370 | 62.565 | 382 | 140 | 3 | 36 | 415 | 1027 | 1407 | 2.33e-153 | 486 |
| MS.gene20202.t1 | MTR_2g040370 | 62.533 | 379 | 138 | 4 | 39 | 414 | 1414 | 1791 | 7.26e-144 | 460 |
| MS.gene20202.t1 | MTR_2g040370 | 62.565 | 382 | 140 | 3 | 36 | 415 | 1027 | 1407 | 2.94e-153 | 486 |
| MS.gene20202.t1 | MTR_2g040370 | 62.434 | 378 | 138 | 4 | 39 | 413 | 1414 | 1790 | 6.08e-143 | 457 |
| MS.gene20202.t1 | MTR_2g040260 | 60.406 | 394 | 153 | 3 | 35 | 426 | 1035 | 1427 | 5.96e-153 | 480 |
| MS.gene20202.t1 | MTR_2g040160 | 60.051 | 393 | 154 | 3 | 36 | 426 | 1107 | 1498 | 3.08e-151 | 475 |
| MS.gene20202.t1 | MTR_4g063720 | 61.756 | 353 | 123 | 2 | 317 | 658 | 220 | 571 | 6.72e-151 | 449 |
| MS.gene20202.t1 | MTR_4g063720 | 70.320 | 219 | 60 | 3 | 36 | 250 | 7 | 224 | 7.67e-97 | 310 |
| MS.gene20202.t1 | MTR_2g032160 | 57.838 | 370 | 149 | 4 | 36 | 399 | 7 | 375 | 1.94e-145 | 431 |
| MS.gene20202.t1 | MTR_2g040350 | 58.228 | 395 | 158 | 5 | 38 | 426 | 820 | 1213 | 7.45e-143 | 447 |
| MS.gene20202.t1 | MTR_2g040220 | 59.487 | 390 | 148 | 5 | 36 | 416 | 1016 | 1404 | 2.96e-142 | 452 |
| MS.gene20202.t1 | MTR_2g040220 | 39.819 | 221 | 65 | 5 | 461 | 663 | 1386 | 1556 | 7.97e-31 | 130 |
| MS.gene20202.t1 | MTR_2g040350 | 58.228 | 395 | 158 | 5 | 38 | 426 | 1038 | 1431 | 1.71e-141 | 448 |
| MS.gene20202.t1 | MTR_6g034005 | 40.951 | 547 | 296 | 12 | 109 | 641 | 2 | 535 | 5.17e-128 | 395 |
| MS.gene20202.t1 | MTR_4g088515 | 47.442 | 430 | 133 | 9 | 39 | 462 | 277 | 619 | 7.14e-114 | 355 |
| MS.gene20202.t1 | MTR_1g077230 | 60.498 | 281 | 104 | 4 | 36 | 310 | 7 | 286 | 1.37e-111 | 338 |
| MS.gene20202.t1 | MTR_7g026080 | 61.265 | 253 | 87 | 5 | 36 | 278 | 7 | 258 | 1.68e-99 | 305 |
| MS.gene20202.t1 | MTR_7g026050 | 41.304 | 368 | 186 | 4 | 269 | 635 | 1 | 339 | 5.96e-86 | 274 |
| MS.gene20202.t1 | MTR_2g031670 | 52.364 | 275 | 105 | 7 | 21 | 274 | 7 | 276 | 1.66e-83 | 267 |
| MS.gene20202.t1 | MTR_2g031670 | 55.224 | 67 | 29 | 1 | 368 | 434 | 275 | 340 | 7.24e-14 | 73.9 |
| MS.gene20202.t1 | MTR_6g033855 | 40.476 | 378 | 138 | 5 | 113 | 487 | 6 | 299 | 2.31e-82 | 263 |
| MS.gene20202.t1 | MTR_6g033810 | 43.675 | 332 | 138 | 3 | 113 | 441 | 6 | 291 | 7.03e-82 | 261 |
| MS.gene20202.t1 | MTR_4g012050 | 36.387 | 382 | 236 | 4 | 37 | 413 | 2 | 381 | 1.54e-76 | 262 |
| MS.gene20202.t1 | MTR_5g092570 | 28.676 | 680 | 390 | 18 | 37 | 639 | 2 | 663 | 2.07e-74 | 255 |
| MS.gene20202.t1 | MTR_2g102180 | 32.112 | 464 | 292 | 7 | 37 | 483 | 2 | 459 | 3.87e-74 | 256 |
| MS.gene20202.t1 | MTR_3g051300 | 31.034 | 493 | 320 | 11 | 37 | 520 | 2 | 483 | 2.40e-73 | 252 |
| MS.gene20202.t1 | MTR_5g006180 | 31.609 | 522 | 294 | 13 | 29 | 520 | 19 | 507 | 3.68e-71 | 241 |
| MS.gene20202.t1 | MTR_2g040355 | 35.205 | 463 | 129 | 12 | 216 | 666 | 2 | 305 | 3.63e-64 | 215 |
| MS.gene20202.t1 | MTR_5g090110 | 31.504 | 492 | 281 | 13 | 39 | 508 | 29 | 486 | 3.12e-62 | 216 |
| MS.gene20202.t1 | MTR_1g077240 | 42.905 | 296 | 158 | 4 | 346 | 640 | 1 | 286 | 7.58e-62 | 208 |
| MS.gene20202.t1 | MTR_1207s0010 | 58.084 | 167 | 68 | 1 | 143 | 307 | 9 | 175 | 1.91e-61 | 203 |
| MS.gene20202.t1 | MTR_3g081170 | 28.932 | 515 | 322 | 12 | 12 | 496 | 8 | 508 | 3.14e-61 | 220 |
| MS.gene20202.t1 | MTR_5g097190 | 47.303 | 241 | 79 | 6 | 36 | 273 | 156 | 351 | 2.37e-58 | 201 |
| MS.gene20202.t1 | MTR_6g478100 | 49.765 | 213 | 88 | 5 | 65 | 273 | 10 | 207 | 4.34e-58 | 199 |
| MS.gene20202.t1 | MTR_4g115780 | 30.224 | 536 | 340 | 14 | 39 | 548 | 141 | 668 | 3.70e-54 | 197 |
| MS.gene20202.t1 | MTR_4g107920 | 29.880 | 502 | 318 | 12 | 39 | 522 | 21 | 506 | 2.03e-53 | 192 |
| MS.gene20202.t1 | MTR_5g005870 | 33.333 | 312 | 193 | 7 | 307 | 614 | 51 | 351 | 1.35e-46 | 170 |
| MS.gene20202.t1 | MTR_1g116250 | 38.321 | 274 | 125 | 6 | 368 | 640 | 56 | 286 | 9.66e-44 | 159 |
| MS.gene20202.t1 | MTR_7g026180 | 50.581 | 172 | 77 | 4 | 103 | 270 | 21 | 188 | 2.29e-41 | 154 |
| MS.gene20202.t1 | MTR_7g026180 | 33.486 | 218 | 109 | 6 | 427 | 641 | 144 | 328 | 2.02e-19 | 90.5 |
| MS.gene20202.t1 | MTR_7g074540 | 39.604 | 202 | 120 | 2 | 442 | 643 | 1 | 200 | 2.10e-39 | 144 |
| MS.gene20202.t1 | MTR_7g451390 | 46.667 | 180 | 93 | 3 | 462 | 640 | 10 | 187 | 5.07e-39 | 142 |
| MS.gene20202.t1 | MTR_6g033910 | 36.408 | 206 | 83 | 3 | 101 | 304 | 19 | 178 | 1.92e-34 | 130 |
| MS.gene20202.t1 | MTR_2g017710 | 35.714 | 252 | 77 | 6 | 257 | 506 | 25 | 193 | 2.31e-34 | 132 |
| MS.gene20202.t1 | MTR_5g005890 | 32.000 | 225 | 103 | 4 | 101 | 323 | 5 | 181 | 6.41e-28 | 111 |
| MS.gene20202.t1 | MTR_1g068900 | 44.681 | 141 | 70 | 4 | 452 | 588 | 23 | 159 | 8.30e-28 | 110 |
| MS.gene20202.t1 | MTR_6g033805 | 70.968 | 62 | 18 | 0 | 39 | 100 | 10 | 71 | 4.46e-24 | 96.7 |
| MS.gene20202.t1 | MTR_4g027235 | 66.176 | 68 | 21 | 1 | 36 | 101 | 7 | 74 | 8.12e-23 | 92.8 |
| MS.gene20202.t1 | MTR_4g027085 | 66.176 | 68 | 21 | 1 | 36 | 101 | 7 | 74 | 8.12e-23 | 92.8 |
| MS.gene20202.t1 | MTR_4g115860 | 38.710 | 93 | 57 | 0 | 422 | 514 | 29 | 121 | 2.13e-16 | 76.3 |
| MS.gene20202.t1 | MTR_6g033815 | 46.575 | 73 | 38 | 1 | 550 | 622 | 1 | 72 | 3.71e-15 | 72.4 |
| MS.gene20202.t1 | MTR_2g040375 | 63.636 | 55 | 20 | 0 | 424 | 478 | 51 | 105 | 7.07e-15 | 72.0 |
| MS.gene20202.t1 | MTR_7g026190 | 40.659 | 91 | 45 | 2 | 315 | 405 | 12 | 93 | 7.31e-13 | 68.6 |
| MS.gene20202.t1 | MTR_7g026095 | 37.736 | 106 | 61 | 2 | 499 | 600 | 243 | 347 | 2.08e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20202.t1 | AT5G42020 | 89.836 | 669 | 67 | 1 | 1 | 669 | 1 | 668 | 0.0 | 1221 |
| MS.gene20202.t1 | AT5G28540 | 91.190 | 647 | 56 | 1 | 1 | 647 | 1 | 646 | 0.0 | 1208 |
| MS.gene20202.t1 | AT5G42020 | 91.091 | 651 | 57 | 1 | 19 | 669 | 24 | 673 | 0.0 | 1207 |
| MS.gene20202.t1 | AT1G09080 | 77.419 | 651 | 142 | 2 | 1 | 647 | 11 | 660 | 0.0 | 1016 |
| MS.gene20202.t1 | AT1G09080 | 77.743 | 647 | 137 | 2 | 1 | 647 | 11 | 650 | 0.0 | 1011 |
| MS.gene20202.t1 | AT5G42020 | 77.015 | 670 | 96 | 5 | 1 | 669 | 1 | 613 | 0.0 | 998 |
| MS.gene20202.t1 | AT3G12580 | 64.547 | 629 | 217 | 4 | 36 | 660 | 7 | 633 | 0.0 | 832 |
| MS.gene20202.t1 | AT3G09440 | 66.234 | 616 | 198 | 5 | 36 | 645 | 7 | 618 | 0.0 | 828 |
| MS.gene20202.t1 | AT3G09440 | 66.234 | 616 | 198 | 5 | 36 | 645 | 7 | 618 | 0.0 | 828 |
| MS.gene20202.t1 | AT3G09440 | 66.234 | 616 | 198 | 5 | 36 | 645 | 7 | 618 | 0.0 | 828 |
| MS.gene20202.t1 | AT3G09440 | 66.234 | 616 | 198 | 5 | 36 | 645 | 7 | 618 | 0.0 | 828 |
| MS.gene20202.t1 | AT5G02500 | 64.984 | 614 | 209 | 4 | 36 | 645 | 7 | 618 | 0.0 | 824 |
| MS.gene20202.t1 | AT1G16030 | 63.550 | 631 | 223 | 5 | 33 | 659 | 3 | 630 | 0.0 | 824 |
| MS.gene20202.t1 | AT5G02490 | 64.984 | 614 | 209 | 4 | 36 | 645 | 7 | 618 | 0.0 | 820 |
| MS.gene20202.t1 | AT1G56410 | 62.704 | 614 | 221 | 4 | 36 | 645 | 7 | 616 | 0.0 | 789 |
| MS.gene20202.t1 | AT5G09590 | 54.138 | 580 | 240 | 11 | 38 | 609 | 59 | 620 | 0.0 | 584 |
| MS.gene20202.t1 | AT4G37910 | 54.310 | 580 | 239 | 11 | 38 | 609 | 54 | 615 | 0.0 | 560 |
| MS.gene20202.t1 | AT4G37910 | 54.310 | 580 | 239 | 11 | 38 | 609 | 54 | 615 | 0.0 | 560 |
| MS.gene20202.t1 | AT4G24280 | 50.934 | 589 | 270 | 11 | 38 | 621 | 80 | 654 | 0.0 | 548 |
| MS.gene20202.t1 | AT5G49910 | 49.196 | 622 | 292 | 13 | 38 | 654 | 80 | 682 | 0.0 | 547 |
| MS.gene20202.t1 | AT5G02500 | 67.010 | 388 | 123 | 3 | 36 | 419 | 7 | 393 | 0.0 | 530 |
| MS.gene20202.t1 | AT5G02500 | 48.077 | 104 | 53 | 1 | 542 | 645 | 386 | 488 | 1.97e-25 | 111 |
| MS.gene20202.t1 | AT1G11660 | 28.356 | 663 | 400 | 14 | 37 | 639 | 2 | 649 | 7.18e-82 | 275 |
| MS.gene20202.t1 | AT1G11660 | 28.356 | 663 | 400 | 14 | 37 | 639 | 2 | 649 | 7.18e-82 | 275 |
| MS.gene20202.t1 | AT1G11660 | 28.356 | 663 | 400 | 14 | 37 | 639 | 2 | 649 | 7.18e-82 | 275 |
| MS.gene20202.t1 | AT2G32120 | 32.877 | 511 | 312 | 10 | 39 | 534 | 31 | 525 | 2.41e-77 | 258 |
| MS.gene20202.t1 | AT2G32120 | 32.877 | 511 | 312 | 10 | 39 | 534 | 31 | 525 | 2.41e-77 | 258 |
| MS.gene20202.t1 | AT1G79930 | 32.159 | 454 | 285 | 7 | 37 | 473 | 2 | 449 | 3.15e-75 | 257 |
| MS.gene20202.t1 | AT1G79930 | 32.159 | 454 | 285 | 7 | 37 | 473 | 2 | 449 | 5.83e-75 | 258 |
| MS.gene20202.t1 | AT1G79920 | 31.718 | 454 | 287 | 7 | 37 | 473 | 2 | 449 | 4.20e-74 | 253 |
| MS.gene20202.t1 | AT1G79920 | 31.718 | 454 | 287 | 7 | 37 | 473 | 2 | 449 | 4.20e-74 | 253 |
| MS.gene20202.t1 | AT1G79920 | 31.718 | 454 | 287 | 7 | 37 | 473 | 2 | 449 | 4.20e-74 | 253 |
| MS.gene20202.t1 | AT1G79920 | 31.718 | 454 | 287 | 7 | 37 | 473 | 2 | 449 | 4.94e-74 | 253 |
| MS.gene20202.t1 | AT1G11660 | 28.275 | 626 | 374 | 14 | 74 | 639 | 2 | 612 | 9.21e-73 | 249 |
| MS.gene20202.t1 | AT4G16660 | 26.075 | 721 | 403 | 21 | 36 | 639 | 24 | 731 | 7.94e-63 | 224 |
| MS.gene20202.t1 | AT4G16660 | 26.075 | 721 | 403 | 21 | 36 | 639 | 48 | 755 | 9.82e-63 | 224 |
Find 193 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATCAAAGATGGTCCTTTC+AGG | 0.185011 | 4.4:+4418916 | None:intergenic |
| ACCAAGTTAGGGACTGTTAT+TGG | 0.230124 | 4.4:-4419102 | MS.gene20202:CDS |
| ACCGCTGCTGCCATTGCTTA+TGG | 0.244088 | 4.4:-4418371 | MS.gene20202:CDS |
| AACATTCTTGTCTTTGATCT+TGG | 0.281163 | 4.4:-4418323 | MS.gene20202:CDS |
| GCAAACAACTGTTTCTATTC+AGG | 0.282305 | 4.4:-4417362 | MS.gene20202:intron |
| GGAGCTCCAGGTGGTGCATC+AGG | 0.283486 | 4.4:-4416600 | MS.gene20202:CDS |
| TGGTAAACAGCAGTGATAAT+TGG | 0.285966 | 4.4:+4416633 | None:intergenic |
| CTCGGGAACTTTGATTTGTC+TGG | 0.291494 | 4.4:-4417183 | MS.gene20202:CDS |
| TTCAAAAGTTGTTGTACCTT+TGG | 0.293588 | 4.4:+4417754 | None:intergenic |
| TTTGATGTCAAGAGACTTAT+CGG | 0.304645 | 4.4:-4418901 | MS.gene20202:CDS |
| GAGGAAGGGACCACCAAGTT+AGG | 0.330316 | 4.4:-4419114 | MS.gene20202:CDS |
| CAAACGGTATTCTAAATGTT+AGG | 0.333992 | 4.4:-4417004 | MS.gene20202:CDS |
| GTTTGTCCTTGTCACTGATT+TGG | 0.335858 | 4.4:+4416796 | None:intergenic |
| GTGGGGATGACAGTGTTTCT+AGG | 0.341786 | 4.4:+4417421 | None:intergenic |
| TGCTTCTTTCTTCAGATTTG+AGG | 0.345147 | 4.4:-4418787 | MS.gene20202:intron |
| ACCGACGATGAGAGATTGAT+TGG | 0.362358 | 4.4:-4418970 | MS.gene20202:CDS |
| AAGGATGCCGGTGTCATTGC+TGG | 0.366360 | 4.4:-4418425 | MS.gene20202:CDS |
| TCACAGGTCCCATTGTCTTC+CGG | 0.366501 | 4.4:+4417854 | None:intergenic |
| CTTCTCACCATCATCTCCTT+AGG | 0.367766 | 4.4:-4419845 | MS.gene20202:intron |
| CCAAGTTAGGGACTGTTATT+GGG | 0.369182 | 4.4:-4419101 | MS.gene20202:CDS |
| CTTGTCTTTGATCTTGGAGG+TGG | 0.371703 | 4.4:-4418317 | MS.gene20202:CDS |
| CCTTCCCCTGATGCACCACC+TGG | 0.374305 | 4.4:+4416594 | None:intergenic |
| TGGCTCGCTCTTCTTCTTGC+GGG | 0.374938 | 4.4:-4419877 | MS.gene20202:CDS |
| ACTGTTATTGGGATAGATCT+TGG | 0.377061 | 4.4:-4419090 | MS.gene20202:CDS |
| ACTCTTCTTTCTCAACAGTT+TGG | 0.379400 | 4.4:+4416694 | None:intergenic |
| CCATTCAAGTGCTTCTTTCA+CGG | 0.386836 | 4.4:+4416728 | None:intergenic |
| ACAAAGGATTGCCGTCTTCT+CGG | 0.387262 | 4.4:-4417201 | MS.gene20202:CDS |
| CTTCACTTTCTTGTCTTCCT+CGG | 0.392206 | 4.4:+4416872 | None:intergenic |
| TTTGAGGTTCTTTCTACAAA+TGG | 0.397590 | 4.4:-4418254 | MS.gene20202:CDS |
| CCAAAGGCAACTGCTTCATC+AGG | 0.398543 | 4.4:+4417691 | None:intergenic |
| TTTACTCTGACCTGAATGTA+TGG | 0.402451 | 4.4:+4418702 | None:intergenic |
| ATTCTTGTCTTTGATCTTGG+AGG | 0.402766 | 4.4:-4418320 | MS.gene20202:CDS |
| TTTCTTCAGATTTGAGGATA+AGG | 0.403180 | 4.4:-4418781 | MS.gene20202:intron |
| CATCAAAGATGGTCCTTTCA+GGG | 0.407212 | 4.4:+4418917 | None:intergenic |
| AGTTGAACAATGACTTGTTC+CGG | 0.409326 | 4.4:-4417873 | MS.gene20202:CDS |
| CAAAGGATTGCCGTCTTCTC+GGG | 0.410284 | 4.4:-4417200 | MS.gene20202:CDS |
| TGGGGAGGCTGCGAAGAATC+TGG | 0.418293 | 4.4:-4418950 | MS.gene20202:CDS |
| GATCACCATTACAAATGAAA+AGG | 0.423968 | 4.4:-4416949 | MS.gene20202:CDS |
| GTATCCAGATATCCTTCTCT+TGG | 0.424894 | 4.4:-4417503 | MS.gene20202:intron |
| GGTAAACAGCAGTGATAATT+GGG | 0.429598 | 4.4:+4416634 | None:intergenic |
| ATCATGGCACTGACTTCCTC+AGG | 0.433544 | 4.4:+4418654 | None:intergenic |
| ATTGATGAGATTGTTCTTGT+TGG | 0.434577 | 4.4:-4417793 | MS.gene20202:CDS |
| CTGGCTACTAAGAGCTCTCT+TGG | 0.435105 | 4.4:+4417975 | None:intergenic |
| CCCAATAACAGTCCCTAACT+TGG | 0.435276 | 4.4:+4419101 | None:intergenic |
| GATGTTGCACCTCTTACCCT+TGG | 0.436670 | 4.4:-4417481 | MS.gene20202:CDS |
| TATTATGAATAGGTGTTTGA+AGG | 0.440657 | 4.4:-4417237 | MS.gene20202:intron |
| CTTCATCTTAGTCAGAATCA+TGG | 0.442913 | 4.4:+4418638 | None:intergenic |
| AAACAGTTGTTTGCTGATCC+TGG | 0.445328 | 4.4:+4417371 | None:intergenic |
| TGCAACATCTGCTGCAAAAG+AGG | 0.446763 | 4.4:-4419133 | MS.gene20202:CDS |
| CAAGTTGGAATCAGATGAAA+AGG | 0.446989 | 4.4:-4416766 | MS.gene20202:CDS |
| CAAAGGTCACTTCAATTTGA+GGG | 0.447858 | 4.4:+4417036 | None:intergenic |
| GGACTTTGATCAGAGAATAA+TGG | 0.449888 | 4.4:-4418091 | MS.gene20202:CDS |
| TCAAAGGTCACTTCAATTTG+AGG | 0.450757 | 4.4:+4417035 | None:intergenic |
| CAGAGGTCAGGTGGAGCTCC+AGG | 0.453414 | 4.4:-4416612 | MS.gene20202:CDS |
| CCTGATGAAGCAGTTGCCTT+TGG | 0.453901 | 4.4:-4417691 | MS.gene20202:CDS |
| AGCAATGACACCGGCATCCT+TGG | 0.458285 | 4.4:+4418427 | None:intergenic |
| CCGACGATGAGAGATTGATT+GGG | 0.463196 | 4.4:-4418969 | MS.gene20202:CDS |
| GACTTGTTCCGGAAGACAAT+GGG | 0.468406 | 4.4:-4417862 | MS.gene20202:CDS |
| GTTTCAATTCCAAGGGTAAG+AGG | 0.470308 | 4.4:+4417472 | None:intergenic |
| GGATGGAAAACCATACATTC+AGG | 0.477959 | 4.4:-4418712 | MS.gene20202:CDS |
| TCGTCCATTGCCTTCTTCAC+AGG | 0.478204 | 4.4:+4417838 | None:intergenic |
| TGAAAAGGGACGCCTGAGCC+AGG | 0.478721 | 4.4:-4416934 | MS.gene20202:CDS |
| GGTCAATTTCCTCCTGGCTC+AGG | 0.479380 | 4.4:+4416922 | None:intergenic |
| CTCCAACAGTTTCAATTCCA+AGG | 0.480598 | 4.4:+4417464 | None:intergenic |
| TCCTTGTTGACAATCTTGTA+AGG | 0.485086 | 4.4:+4418732 | None:intergenic |
| ATGGCTCGCTCTTCTTCTTG+CGG | 0.485978 | 4.4:-4419878 | MS.gene20202:CDS |
| TTTCCACACGGACTTGGTGC+TGG | 0.487623 | 4.4:+4417956 | None:intergenic |
| TGCTGCCATTGCTTATGGAT+TGG | 0.489882 | 4.4:-4418366 | MS.gene20202:CDS |
| GATGCCGTGGTCACTGTCCC+AGG | 0.494172 | 4.4:-4418579 | MS.gene20202:intron |
| GTCTTCCTCGGCAAACTCCT+CGG | 0.495002 | 4.4:+4416884 | None:intergenic |
| CCTGGTAGGTGGTAAACACC+TGG | 0.496443 | 4.4:+4417389 | None:intergenic |
| AATGACACCGGCATCCTTGG+TGG | 0.499327 | 4.4:+4418430 | None:intergenic |
| ACAAATGGAGATACCCATCT+TGG | 0.500381 | 4.4:-4418239 | MS.gene20202:CDS |
| ATCACCATTACAAATGAAAA+GGG | 0.502193 | 4.4:-4416948 | MS.gene20202:CDS |
| ACTCAATTTCCACACGGACT+TGG | 0.504632 | 4.4:+4417950 | None:intergenic |
| CTGGAGCTCCACCTGACCTC+TGG | 0.505070 | 4.4:+4416613 | None:intergenic |
| CTTCAATGATGCTCAGAGGC+AGG | 0.507132 | 4.4:-4418453 | MS.gene20202:CDS |
| GACAATGGGACCTGTGAAGA+AGG | 0.509040 | 4.4:-4417848 | MS.gene20202:CDS |
| AGTGATAATTGGGTTGCAAA+CGG | 0.511011 | 4.4:+4416644 | None:intergenic |
| ACCCTTGGAATTGAAACTGT+TGG | 0.511117 | 4.4:-4417466 | MS.gene20202:CDS |
| GAAAGAAGCACTTGAATGGC+TGG | 0.513283 | 4.4:-4416724 | MS.gene20202:CDS |
| GCTTATGGATTGGACAAGAA+AGG | 0.514548 | 4.4:-4418356 | MS.gene20202:CDS |
| CATGATTCTGACTAAGATGA+AGG | 0.516191 | 4.4:-4418637 | MS.gene20202:CDS |
| TCCTTGCACTGCAGCACCAA+AGG | 0.516370 | 4.4:+4417675 | None:intergenic |
| AAACGGTATTCTAAATGTTA+GGG | 0.516624 | 4.4:-4417003 | MS.gene20202:CDS |
| GAGCTCCAGGTGGTGCATCA+GGG | 0.517615 | 4.4:-4416599 | MS.gene20202:CDS |
| CCATCCGGTCAATTTCCTCC+TGG | 0.517789 | 4.4:+4416916 | None:intergenic |
| TCAAATCGAGCACGGGTAAG+TGG | 0.518725 | 4.4:+4417898 | None:intergenic |
| AAGAAGGCAATGGACGATGC+TGG | 0.518963 | 4.4:-4417832 | MS.gene20202:CDS |
| GAAGGATTACTTTGATGGAA+AGG | 0.521373 | 4.4:-4417734 | MS.gene20202:CDS |
| GATACGATTTCCTTGGTCGT+TGG | 0.522054 | 4.4:+4419014 | None:intergenic |
| GGACAAACTTGCTGACAAGT+TGG | 0.525676 | 4.4:-4416781 | MS.gene20202:CDS |
| AAAACAAACCTTGGAGCTGG+TGG | 0.525948 | 4.4:+4417156 | None:intergenic |
| TACAAGATTGTCAACAAGGA+TGG | 0.525974 | 4.4:-4418729 | MS.gene20202:CDS |
| AGGAAGGGACCACCAAGTTA+GGG | 0.527633 | 4.4:-4419113 | MS.gene20202:CDS |
| AGCAAGGACAACAGAGCACT+TGG | 0.529505 | 4.4:-4418024 | MS.gene20202:CDS |
| ATAAGCAATGGCAGCAGCGG+TGG | 0.530847 | 4.4:+4418373 | None:intergenic |
| TGATGGAAAGGAACCAAACA+AGG | 0.531735 | 4.4:-4417722 | MS.gene20202:CDS |
| ACTGCTGTTTACCAGAGGTC+AGG | 0.531930 | 4.4:-4416624 | MS.gene20202:CDS |
| ACCGTTTGCATCTACTTCAA+AGG | 0.532713 | 4.4:+4417019 | None:intergenic |
| GAAATCGTATCACACCATCA+TGG | 0.533173 | 4.4:-4419002 | MS.gene20202:CDS |
| AGGCAGGCCACCAAGGATGC+CGG | 0.534449 | 4.4:-4418437 | MS.gene20202:CDS |
| AATAGGTGTTTGAAGGTGAG+AGG | 0.535211 | 4.4:-4417230 | MS.gene20202:intron |
| CCTCGGCTTCACGAACCATC+CGG | 0.536252 | 4.4:+4416901 | None:intergenic |
| GATGAGATTGTTCTTGTTGG+TGG | 0.537949 | 4.4:-4417790 | MS.gene20202:CDS |
| AAATCGTATCACACCATCAT+GGG | 0.540268 | 4.4:-4419001 | MS.gene20202:CDS |
| CCGTGAAAGAAGCACTTGAA+TGG | 0.543546 | 4.4:-4416728 | MS.gene20202:CDS |
| TGGCAGCTGTCAACCCTGAA+AGG | 0.545326 | 4.4:-4418930 | MS.gene20202:CDS |
| TGTGTTGGTGTTTACAAGAA+CGG | 0.547276 | 4.4:-4419054 | MS.gene20202:CDS |
| AAATGTTAGGGCAGAAGACA+AGG | 0.547526 | 4.4:-4416991 | MS.gene20202:CDS |
| GAGCACTTGGAAAGCTGAGG+AGG | 0.547900 | 4.4:-4418011 | MS.gene20202:CDS |
| CTTGGAATTGAAACTGTTGG+AGG | 0.549933 | 4.4:-4417463 | MS.gene20202:CDS |
| GAAACCGCTGAAGCATTCCT+TGG | 0.551326 | 4.4:-4418615 | MS.gene20202:CDS |
| AAGTCTCTTGACATCAAAGA+TGG | 0.553461 | 4.4:+4418906 | None:intergenic |
| ATAAGTACTCACCTCCAAGA+TGG | 0.554153 | 4.4:+4418225 | None:intergenic |
| GCCTTTGGTGCTGCAGTGCA+AGG | 0.554487 | 4.4:-4417676 | MS.gene20202:CDS |
| CACAAAACAAACCTTGGAGC+TGG | 0.555992 | 4.4:+4417153 | None:intergenic |
| AGCTCCAGGTGGTGCATCAG+GGG | 0.556960 | 4.4:-4416598 | MS.gene20202:CDS |
| ATACATTCAGGTCAGAGTAA+AGG | 0.559988 | 4.4:-4418700 | MS.gene20202:CDS |
| ACCTTTGAAGTAGATGCAAA+CGG | 0.560638 | 4.4:-4417020 | MS.gene20202:CDS |
| CCAGGTGGTGCATCAGGGGA+AGG | 0.561188 | 4.4:-4416594 | MS.gene20202:CDS |
| TGCTCAGAGGCAGGCCACCA+AGG | 0.561411 | 4.4:-4418444 | MS.gene20202:CDS |
| CCAGGTGTTTACCACCTACC+AGG | 0.561692 | 4.4:-4417389 | MS.gene20202:CDS |
| TTCCTCAGGGCTGAACACCT+TGG | 0.565203 | 4.4:+4418668 | None:intergenic |
| CTGGAATCCCACCAGCTCCA+AGG | 0.566039 | 4.4:-4417164 | MS.gene20202:intron |
| ACATCTGCTGCAAAAGAGGA+AGG | 0.567823 | 4.4:-4419129 | MS.gene20202:CDS |
| CCCAATCAATCTCTCATCGT+CGG | 0.570425 | 4.4:+4418969 | None:intergenic |
| TAAGTACTCACCTCCAAGAT+GGG | 0.574552 | 4.4:+4418226 | None:intergenic |
| TGGTGCATCAGGGGAAGGAG+AGG | 0.575558 | 4.4:-4416589 | MS.gene20202:CDS |
| TCCAACAGTTTCAATTCCAA+GGG | 0.575984 | 4.4:+4417465 | None:intergenic |
| TGACTTGTTCCGGAAGACAA+TGG | 0.576660 | 4.4:-4417863 | MS.gene20202:CDS |
| TCCTTACAAGATTGTCAACA+AGG | 0.577546 | 4.4:-4418733 | MS.gene20202:CDS |
| AATAACAGTCCCTAACTTGG+TGG | 0.577985 | 4.4:+4419104 | None:intergenic |
| AATCAAAGTTCCCGAGAAGA+CGG | 0.581537 | 4.4:+4417190 | None:intergenic |
| ATAATTACCTAAGGAGATGA+TGG | 0.583921 | 4.4:+4419838 | None:intergenic |
| TCCATAAGCAATGGCAGCAG+CGG | 0.585512 | 4.4:+4418370 | None:intergenic |
| AATGGAGATACCCATCTTGG+AGG | 0.588652 | 4.4:-4418236 | MS.gene20202:intron |
| CTTGTCCAATCCATAAGCAA+TGG | 0.592089 | 4.4:+4418361 | None:intergenic |
| CAACTCTTCAAATCGAGCAC+GGG | 0.593000 | 4.4:+4417891 | None:intergenic |
| TGAAGGAAAGAATTGATGCT+CGG | 0.593052 | 4.4:-4416854 | MS.gene20202:CDS |
| CCAGGAGGAAATTGACCGGA+TGG | 0.593074 | 4.4:-4416916 | MS.gene20202:CDS |
| TCAACTCTTCAAATCGAGCA+CGG | 0.593848 | 4.4:+4417890 | None:intergenic |
| AGGGCAGAAGACAAGGGCAC+AGG | 0.595427 | 4.4:-4416984 | MS.gene20202:CDS |
| GGAACAACATATTCATGTGT+TGG | 0.597629 | 4.4:-4419069 | MS.gene20202:CDS |
| ATGGTGTGATACGATTTCCT+TGG | 0.600611 | 4.4:+4419007 | None:intergenic |
| GCTGTTTACCAGAGGTCAGG+TGG | 0.602705 | 4.4:-4416621 | MS.gene20202:CDS |
| CCGGATGGTTCGTGAAGCCG+AGG | 0.603140 | 4.4:-4416901 | MS.gene20202:CDS |
| TGAGCCAGGAGGAAATTGAC+CGG | 0.604755 | 4.4:-4416920 | MS.gene20202:CDS |
| AAAGGTCACTTCAATTTGAG+GGG | 0.605663 | 4.4:+4417037 | None:intergenic |
| GAGGTGCAACATCCAAGAGA+AGG | 0.607551 | 4.4:+4417491 | None:intergenic |
| TAAGCAATGGCAGCAGCGGT+GGG | 0.609672 | 4.4:+4418374 | None:intergenic |
| AGCACTTGGAAAGCTGAGGA+GGG | 0.611229 | 4.4:-4418010 | MS.gene20202:CDS |
| CGATGAGAGATTGATTGGGG+AGG | 0.612921 | 4.4:-4418965 | MS.gene20202:CDS |
| CTTGCCAAGGAATGCTTCAG+CGG | 0.613919 | 4.4:+4418611 | None:intergenic |
| CGAGGAAGACAAGAAAGTGA+AGG | 0.622597 | 4.4:-4416871 | MS.gene20202:CDS |
| GCATAGCAAGGATATTAGCA+AGG | 0.623368 | 4.4:-4418040 | MS.gene20202:CDS |
| CGACGATGAGAGATTGATTG+GGG | 0.628193 | 4.4:-4418968 | MS.gene20202:CDS |
| TGTTTGCTGATCCTGGTAGG+TGG | 0.630248 | 4.4:+4417378 | None:intergenic |
| CAAGACTATTCGTGATGCCG+TGG | 0.630982 | 4.4:-4418592 | MS.gene20202:CDS |
| GAAATCATAGCCAACGACCA+AGG | 0.633608 | 4.4:-4419024 | MS.gene20202:CDS |
| CTGGTAGGTGGTAAACACCT+GGG | 0.633786 | 4.4:+4417390 | None:intergenic |
| AGGTCAGGTGGAGCTCCAGG+TGG | 0.634814 | 4.4:-4416609 | MS.gene20202:CDS |
| TTCTTGTTGGTGGAAGCACA+AGG | 0.637706 | 4.4:-4417780 | MS.gene20202:CDS |
| AAACAAACCTTGGAGCTGGT+GGG | 0.639146 | 4.4:+4417157 | None:intergenic |
| GGGACCTGTGAAGAAGGCAA+TGG | 0.639949 | 4.4:-4417842 | MS.gene20202:CDS |
| TTCACCTGGGACAGTGACCA+CGG | 0.640825 | 4.4:+4418575 | None:intergenic |
| AGTTGTTTGCTGATCCTGGT+AGG | 0.644960 | 4.4:+4417375 | None:intergenic |
| TGAAGCCGAGGAGTTTGCCG+AGG | 0.647044 | 4.4:-4416889 | MS.gene20202:CDS |
| TATGGATTGGACAAGAAAGG+TGG | 0.647597 | 4.4:-4418353 | MS.gene20202:CDS |
| CAAAGGCAACTGCTTCATCA+GGG | 0.652946 | 4.4:+4417692 | None:intergenic |
| GATGGAAAGGAACCAAACAA+GGG | 0.654365 | 4.4:-4417721 | MS.gene20202:CDS |
| AGTAAAGGATGGTGAGACCA+AGG | 0.655359 | 4.4:-4418685 | MS.gene20202:CDS |
| TGTCATTGCTGGTTTGAACG+TGG | 0.655475 | 4.4:-4418414 | MS.gene20202:CDS |
| TTATCACTGCTGTTTACCAG+AGG | 0.655496 | 4.4:-4416629 | MS.gene20202:CDS |
| CATCTGCTGCAAAAGAGGAA+GGG | 0.658549 | 4.4:-4419128 | MS.gene20202:CDS |
| ATGGAAAGGAACCAAACAAG+GGG | 0.659203 | 4.4:-4417720 | MS.gene20202:CDS |
| ATTCAGGTCAGAGTAAAGGA+TGG | 0.659644 | 4.4:-4418696 | MS.gene20202:CDS |
| TCATGGCACTGACTTCCTCA+GGG | 0.661707 | 4.4:+4418655 | None:intergenic |
| ACAGAGCACTTGGAAAGCTG+AGG | 0.662613 | 4.4:-4418014 | MS.gene20202:CDS |
| GTTCAAACCAGCAATGACAC+CGG | 0.667444 | 4.4:+4418418 | None:intergenic |
| TCGGTGAAAGAAACCCATGA+TGG | 0.669628 | 4.4:+4418988 | None:intergenic |
| CATCACGAATAGTCTTGCCA+AGG | 0.671739 | 4.4:+4418598 | None:intergenic |
| GACCAAGGTGTTCAGCCCTG+AGG | 0.674395 | 4.4:-4418670 | MS.gene20202:CDS |
| TAGCCAGCACCAAGTCCGTG+TGG | 0.679452 | 4.4:-4417959 | MS.gene20202:CDS |
| TGGAAGCACAAGGATTCCAA+AGG | 0.684118 | 4.4:-4417770 | MS.gene20202:CDS |
| AATGTTAGGGCAGAAGACAA+GGG | 0.691069 | 4.4:-4416990 | MS.gene20202:CDS |
| AGGTGAGAGGAGTCTCACAA+AGG | 0.713013 | 4.4:-4417217 | MS.gene20202:CDS |
| AAAGGGACGCCTGAGCCAGG+AGG | 0.717721 | 4.4:-4416931 | MS.gene20202:CDS |
| CTTACTTCAATGATGCTCAG+AGG | 0.721672 | 4.4:-4418457 | MS.gene20202:CDS |
| AGTATCTTGACAATTGACAA+TGG | 0.727159 | 4.4:-4418281 | MS.gene20202:CDS |
| GAGGGTGGTGAAGAAACCAA+AGG | 0.727490 | 4.4:-4417637 | MS.gene20202:intron |
| AAAGTGACTCAATTTCCACA+CGG | 0.743191 | 4.4:+4417944 | None:intergenic |
| TGGAAAGGAACCAAACAAGG+GGG | 0.770257 | 4.4:-4417719 | MS.gene20202:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTCAAAACATTTAAAT+CGG | + | chr4.4:4417240-4417259 | None:intergenic | 15.0% |
| !! | AACATAAATCAACTATTTAA+AGG | + | chr4.4:4417167-4417186 | None:intergenic | 15.0% |
| !! | ATTAATTAACAGTCTTTAAA+AGG | + | chr4.4:4416922-4416941 | None:intergenic | 15.0% |
| !! | TTGTTATAATTTGATGTAAT+GGG | - | chr4.4:4417608-4417627 | MS.gene20202:intron | 15.0% |
| !!! | TTTGTTATAATTTGATGTAA+TGG | - | chr4.4:4417607-4417626 | MS.gene20202:intron | 15.0% |
| !! | AAATACAATATTGTGTAATG+AGG | - | chr4.4:4419142-4419161 | MS.gene20202:CDS | 20.0% |
| !! | AACAAATAAAAAGGTCTAAT+TGG | + | chr4.4:4416984-4417003 | None:intergenic | 20.0% |
| !! | AATACAATATTGTGTAATGA+GGG | - | chr4.4:4419143-4419162 | MS.gene20202:CDS | 20.0% |
| !! | ATGTTAAAATGAAGACAAAA+TGG | + | chr4.4:4417933-4417952 | None:intergenic | 20.0% |
| !! | ATTACAAATAGAACCTTAAA+CGG | + | chr4.4:4417140-4417159 | None:intergenic | 20.0% |
| !! | GATAATCCAAACAAATAAAA+AGG | + | chr4.4:4416993-4417012 | None:intergenic | 20.0% |
| !! | TACACAATATTGTATTTAGA+AGG | + | chr4.4:4419139-4419158 | None:intergenic | 20.0% |
| !! | TGTTAAAATGAAGACAAAAT+GGG | + | chr4.4:4417932-4417951 | None:intergenic | 20.0% |
| !!! | ATTAGACCTTTTTATTTGTT+TGG | - | chr4.4:4416984-4417003 | MS.gene20202:CDS | 20.0% |
| !!! | GTTTTAGATCTTTGATTTTA+TGG | - | chr4.4:4416690-4416709 | MS.gene20202:CDS | 20.0% |
| !!! | TAGTTGATTTATGTTGTTTT+CGG | - | chr4.4:4417172-4417191 | MS.gene20202:CDS | 20.0% |
| !!! | TGATTAATCAATTTTTCTTG+TGG | - | chr4.4:4419359-4419378 | MS.gene20202:intron | 20.0% |
| !!! | TGTCTGTTTTTATTATGAAT+AGG | - | chr4.4:4419188-4419207 | MS.gene20202:intron | 20.0% |
| !!! | TTACTAGTGATTTATTTTAC+TGG | - | chr4.4:4417050-4417069 | MS.gene20202:intron | 20.0% |
| !!! | TTGTTTTGTTTTGAATTTTG+TGG | - | chr4.4:4416860-4416879 | MS.gene20202:CDS | 20.0% |
| ! | AAACGGTATTCTAAATGTTA+GGG | - | chr4.4:4419432-4419451 | MS.gene20202:intron | 25.0% |
| ! | ACAAAAGCAATGAGAAAAAA+AGG | + | chr4.4:4416669-4416688 | None:intergenic | 25.0% |
| ! | AGATATGTGATAATTACCTA+AGG | + | chr4.4:4416609-4416628 | None:intergenic | 25.0% |
| ! | AGATGAAAAGGAAAAAATTG+AGG | - | chr4.4:4419681-4419700 | MS.gene20202:intron | 25.0% |
| ! | ATACAATATTGTGTAATGAG+GGG | - | chr4.4:4419144-4419163 | MS.gene20202:CDS | 25.0% |
| ! | ATCACCATTACAAATGAAAA+GGG | - | chr4.4:4419487-4419506 | MS.gene20202:intron | 25.0% |
| ! | GTTAAAATGAAGACAAAATG+GGG | + | chr4.4:4417931-4417950 | None:intergenic | 25.0% |
| ! | TATTATGAATAGGTGTTTGA+AGG | - | chr4.4:4419198-4419217 | MS.gene20202:intron | 25.0% |
| ! | TTAATTAATACAATTACGCG+CGG | - | chr4.4:4416933-4416952 | MS.gene20202:CDS | 25.0% |
| ! | TTACAAATAGAACCTTAAAC+GGG | + | chr4.4:4417139-4417158 | None:intergenic | 25.0% |
| !!! | AGTTGATTTATGTTGTTTTC+GGG | - | chr4.4:4417173-4417192 | MS.gene20202:CDS | 25.0% |
| !!! | TATTTGTTATTGATGCAAGT+AGG | - | chr4.4:4418869-4418888 | MS.gene20202:intron | 25.0% |
| !!! | TGTCTTCATTTTAACATTTC+TGG | - | chr4.4:4417936-4417955 | MS.gene20202:CDS | 25.0% |
| !!! | TTTATTTTACTGGCTTCAAA+TGG | - | chr4.4:4417060-4417079 | MS.gene20202:intron | 25.0% |
| AACATTCTTGTCTTTGATCT+TGG | - | chr4.4:4418112-4418131 | MS.gene20202:intron | 30.0% | |
| AACGGGAAAAAACATGATTA+TGG | + | chr4.4:4417122-4417141 | None:intergenic | 30.0% | |
| AATTAGAATGTGATGCAAGT+AGG | + | chr4.4:4416740-4416759 | None:intergenic | 30.0% | |
| AGTATCTTGACAATTGACAA+TGG | - | chr4.4:4418154-4418173 | MS.gene20202:intron | 30.0% | |
| ATAATTACCTAAGGAGATGA+TGG | + | chr4.4:4416600-4416619 | None:intergenic | 30.0% | |
| ATAGACTATAATGGTACCTT+TGG | + | chr4.4:4418817-4418836 | None:intergenic | 30.0% | |
| ATTAGAATGTGATGCAAGTA+GGG | + | chr4.4:4416739-4416758 | None:intergenic | 30.0% | |
| ATTGATGAGATTGTTCTTGT+TGG | - | chr4.4:4418642-4418661 | MS.gene20202:CDS | 30.0% | |
| CAAACGGTATTCTAAATGTT+AGG | - | chr4.4:4419431-4419450 | MS.gene20202:intron | 30.0% | |
| CTTCTATGAACTTTCTCTAT+TGG | - | chr4.4:4419317-4419336 | MS.gene20202:intron | 30.0% | |
| GATCACCATTACAAATGAAA+AGG | - | chr4.4:4419486-4419505 | MS.gene20202:intron | 30.0% | |
| TAACTCTTCAATTGTTTACC+AGG | - | chr4.4:4418318-4418337 | MS.gene20202:CDS | 30.0% | |
| TGATATCACAAAACAAACCT+TGG | + | chr4.4:4419291-4419310 | None:intergenic | 30.0% | |
| TTCAAAAGTTGTTGTACCTT+TGG | + | chr4.4:4418684-4418703 | None:intergenic | 30.0% | |
| TTGTCGTTATAATATTGCGA+TGG | - | chr4.4:4417259-4417278 | MS.gene20202:intron | 30.0% | |
| TTTCTTCAGATTTGAGGATA+AGG | - | chr4.4:4417654-4417673 | MS.gene20202:CDS | 30.0% | |
| TTTGATGTCAAGAGACTTAT+CGG | - | chr4.4:4417534-4417553 | MS.gene20202:intron | 30.0% | |
| ! | GTTTTTCATGTTGTAGACAT+AGG | + | chr4.4:4419620-4419639 | None:intergenic | 30.0% |
| ! | TTTGAGGTTCTTTCTACAAA+TGG | - | chr4.4:4418181-4418200 | MS.gene20202:intron | 30.0% |
| ! | TTTTATGGGATGTGATTACA+TGG | - | chr4.4:4417202-4417221 | MS.gene20202:CDS | 30.0% |
| !! | AAAGGTACAACAACTTTTGA+AGG | - | chr4.4:4418683-4418702 | MS.gene20202:CDS | 30.0% |
| !! | AATTGACAATGGTGTTTTTG+AGG | - | chr4.4:4418165-4418184 | MS.gene20202:intron | 30.0% |
| !! | CTTTTGAAGGATTACTTTGA+TGG | - | chr4.4:4418696-4418715 | MS.gene20202:CDS | 30.0% |
| !!! | ATCATGTTTTTTCCCGTTTA+AGG | - | chr4.4:4417124-4417143 | MS.gene20202:intron | 30.0% |
| !!! | GAAATTGAGTCACTTTTTGA+TGG | - | chr4.4:4418498-4418517 | MS.gene20202:intron | 30.0% |
| !!! | TTTTCGGGTAATGCTTTTAT+GGG | - | chr4.4:4417188-4417207 | MS.gene20202:CDS | 30.0% |
| AAAGGTCACTTCAATTTGAG+GGG | + | chr4.4:4419401-4419420 | None:intergenic | 35.0% | |
| AAAGTGACTCAATTTCCACA+CGG | + | chr4.4:4418494-4418513 | None:intergenic | 35.0% | |
| AAATCGTATCACACCATCAT+GGG | - | chr4.4:4417434-4417453 | MS.gene20202:CDS | 35.0% | |
| AAGTCTCTTGACATCAAAGA+TGG | + | chr4.4:4417532-4417551 | None:intergenic | 35.0% | |
| AATAAAAACAGACAACACCC+CGG | + | chr4.4:4419182-4419201 | None:intergenic | 35.0% | |
| ACAATTGAAGAGTTAGCACT+TGG | + | chr4.4:4418313-4418332 | None:intergenic | 35.0% | |
| ACTCTTCTTTCTCAACAGTT+TGG | + | chr4.4:4419744-4419763 | None:intergenic | 35.0% | |
| ACTGTTATTGGGATAGATCT+TGG | - | chr4.4:4417345-4417364 | MS.gene20202:intron | 35.0% | |
| AGCAATATGCAGTGGAATAA+TGG | + | chr4.4:4419106-4419125 | None:intergenic | 35.0% | |
| AGCTACCTAATGCAATTGAA+AGG | + | chr4.4:4418847-4418866 | None:intergenic | 35.0% | |
| ATACATTCAGGTCAGAGTAA+AGG | - | chr4.4:4417735-4417754 | MS.gene20202:CDS | 35.0% | |
| ATATTGCGATGGTTTATTGC+AGG | - | chr4.4:4417270-4417289 | MS.gene20202:intron | 35.0% | |
| ATTCTTGTCTTTGATCTTGG+AGG | - | chr4.4:4418115-4418134 | MS.gene20202:intron | 35.0% | |
| CAAAGGTCACTTCAATTTGA+GGG | + | chr4.4:4419402-4419421 | None:intergenic | 35.0% | |
| CATGATTCTGACTAAGATGA+AGG | - | chr4.4:4417798-4417817 | MS.gene20202:CDS | 35.0% | |
| CTTCATCTTAGTCAGAATCA+TGG | + | chr4.4:4417800-4417819 | None:intergenic | 35.0% | |
| GAAAAACCAAATCAGTGACA+AGG | - | chr4.4:4419633-4419652 | MS.gene20202:intron | 35.0% | |
| GAAAGTAACCAAATTGCATG+AGG | + | chr4.4:4417906-4417925 | None:intergenic | 35.0% | |
| GAAGGATTACTTTGATGGAA+AGG | - | chr4.4:4418701-4418720 | MS.gene20202:CDS | 35.0% | |
| GGAACAACATATTCATGTGT+TGG | - | chr4.4:4417366-4417385 | MS.gene20202:CDS | 35.0% | |
| GGACTTTGATCAGAGAATAA+TGG | - | chr4.4:4418344-4418363 | MS.gene20202:CDS | 35.0% | |
| GGCTAGAGTATAGACTATAA+TGG | + | chr4.4:4418826-4418845 | None:intergenic | 35.0% | |
| GGTAAACAGCAGTGATAATT+GGG | + | chr4.4:4419804-4419823 | None:intergenic | 35.0% | |
| TACAAGATTGTCAACAAGGA+TGG | - | chr4.4:4417706-4417725 | MS.gene20202:CDS | 35.0% | |
| TCAAAGGTCACTTCAATTTG+AGG | + | chr4.4:4419403-4419422 | None:intergenic | 35.0% | |
| TCCAACAGTTTCAATTCCAA+GGG | + | chr4.4:4418973-4418992 | None:intergenic | 35.0% | |
| TCCTTACAAGATTGTCAACA+AGG | - | chr4.4:4417702-4417721 | MS.gene20202:CDS | 35.0% | |
| TCCTTGTTGACAATCTTGTA+AGG | + | chr4.4:4417706-4417725 | None:intergenic | 35.0% | |
| TGAAGGAAAGAATTGATGCT+CGG | - | chr4.4:4419581-4419600 | MS.gene20202:intron | 35.0% | |
| TGCTTCTTTCTTCAGATTTG+AGG | - | chr4.4:4417648-4417667 | MS.gene20202:CDS | 35.0% | |
| TGGTAAACAGCAGTGATAAT+TGG | + | chr4.4:4419805-4419824 | None:intergenic | 35.0% | |
| TTATTCCACTGCATATTGCT+AGG | - | chr4.4:4419106-4419125 | MS.gene20202:CDS | 35.0% | |
| TTCTTGTGGTAATTGAACAG+AGG | - | chr4.4:4419373-4419392 | MS.gene20202:intron | 35.0% | |
| TTTACTCTGACCTGAATGTA+TGG | + | chr4.4:4417736-4417755 | None:intergenic | 35.0% | |
| ! | AACTTGTTCCTCATGCAATT+TGG | - | chr4.4:4417895-4417914 | MS.gene20202:CDS | 35.0% |
| ! | AGTGATAATTGGGTTGCAAA+CGG | + | chr4.4:4419794-4419813 | None:intergenic | 35.0% |
| ! | CAAGTTGGAATCAGATGAAA+AGG | - | chr4.4:4419669-4419688 | MS.gene20202:intron | 35.0% |
| ! | CAATGAGAGAGTGTAATACT+AGG | + | chr4.4:4418898-4418917 | None:intergenic | 35.0% |
| ! | GATCAAGAAAAAGCATAGCA+AGG | - | chr4.4:4418383-4418402 | MS.gene20202:CDS | 35.0% |
| ! | TCTAGCCTTTCAATTGCATT+AGG | - | chr4.4:4418839-4418858 | MS.gene20202:intron | 35.0% |
| ! | TGTGTTGGTGTTTACAAGAA+CGG | - | chr4.4:4417381-4417400 | MS.gene20202:CDS | 35.0% |
| !! | ACCTTTGAAGTAGATGCAAA+CGG | - | chr4.4:4419415-4419434 | MS.gene20202:intron | 35.0% |
| !! | AGTTGAACAATGACTTGTTC+CGG | - | chr4.4:4418562-4418581 | MS.gene20202:intron | 35.0% |
| !! | GCAAACAACTGTTTCTATTC+AGG | - | chr4.4:4419073-4419092 | MS.gene20202:CDS | 35.0% |
| !!! | GTTTTCGGGTAATGCTTTTA+TGG | - | chr4.4:4417187-4417206 | MS.gene20202:CDS | 35.0% |
| AAATGTTAGGGCAGAAGACA+AGG | - | chr4.4:4419444-4419463 | MS.gene20202:intron | 40.0% | |
| AATAACAGTCCCTAACTTGG+TGG | + | chr4.4:4417334-4417353 | None:intergenic | 40.0% | |
| AATAGGTGTTTGAAGGTGAG+AGG | - | chr4.4:4419205-4419224 | MS.gene20202:intron | 40.0% | |
| AATCAAAGTTCCCGAGAAGA+CGG | + | chr4.4:4419248-4419267 | None:intergenic | 40.0% | |
| AATGTCCTAGCAATATGCAG+TGG | + | chr4.4:4419114-4419133 | None:intergenic | 40.0% | |
| AATGTTAGGGCAGAAGACAA+GGG | - | chr4.4:4419445-4419464 | MS.gene20202:intron | 40.0% | |
| ACAAATGGAGATACCCATCT+TGG | - | chr4.4:4418196-4418215 | MS.gene20202:intron | 40.0% | |
| ACATCAAAGATGGTCCTTTC+AGG | + | chr4.4:4417522-4417541 | None:intergenic | 40.0% | |
| ACATCCAAGAGAAGGATATC+TGG | + | chr4.4:4418939-4418958 | None:intergenic | 40.0% | |
| ACCAAGTTAGGGACTGTTAT+TGG | - | chr4.4:4417333-4417352 | MS.gene20202:intron | 40.0% | |
| ACCCTTGGAATTGAAACTGT+TGG | - | chr4.4:4418969-4418988 | MS.gene20202:CDS | 40.0% | |
| ACCGTTTGCATCTACTTCAA+AGG | + | chr4.4:4419419-4419438 | None:intergenic | 40.0% | |
| ATAAGTACTCACCTCCAAGA+TGG | + | chr4.4:4418213-4418232 | None:intergenic | 40.0% | |
| ATGGAAAGGAACCAAACAAG+GGG | - | chr4.4:4418715-4418734 | MS.gene20202:CDS | 40.0% | |
| ATGGTGTGATACGATTTCCT+TGG | + | chr4.4:4417431-4417450 | None:intergenic | 40.0% | |
| ATTCAGGTCAGAGTAAAGGA+TGG | - | chr4.4:4417739-4417758 | MS.gene20202:CDS | 40.0% | |
| CATCAAAGATGGTCCTTTCA+GGG | + | chr4.4:4417521-4417540 | None:intergenic | 40.0% | |
| CCAAGTTAGGGACTGTTATT+GGG | - | chr4.4:4417334-4417353 | MS.gene20202:intron | 40.0% | |
| CCATTCAAGTGCTTCTTTCA+CGG | + | chr4.4:4419710-4419729 | None:intergenic | 40.0% | |
| CTCCAACAGTTTCAATTCCA+AGG | + | chr4.4:4418974-4418993 | None:intergenic | 40.0% | |
| CTTACTTCAATGATGCTCAG+AGG | - | chr4.4:4417978-4417997 | MS.gene20202:CDS | 40.0% | |
| CTTCAATTGTTTACCAGGTG+AGG | - | chr4.4:4418323-4418342 | MS.gene20202:CDS | 40.0% | |
| CTTCACTTTCTTGTCTTCCT+CGG | + | chr4.4:4419566-4419585 | None:intergenic | 40.0% | |
| CTTGGAATTGAAACTGTTGG+AGG | - | chr4.4:4418972-4418991 | MS.gene20202:CDS | 40.0% | |
| CTTGTCCAATCCATAAGCAA+TGG | + | chr4.4:4418077-4418096 | None:intergenic | 40.0% | |
| GAAATCGTATCACACCATCA+TGG | - | chr4.4:4417433-4417452 | MS.gene20202:CDS | 40.0% | |
| GATGAGATTGTTCTTGTTGG+TGG | - | chr4.4:4418645-4418664 | MS.gene20202:CDS | 40.0% | |
| GATGGAAAGGAACCAAACAA+GGG | - | chr4.4:4418714-4418733 | MS.gene20202:CDS | 40.0% | |
| GCATAGCAAGGATATTAGCA+AGG | - | chr4.4:4418395-4418414 | MS.gene20202:CDS | 40.0% | |
| GGATGGAAAACCATACATTC+AGG | - | chr4.4:4417723-4417742 | MS.gene20202:CDS | 40.0% | |
| GTATCCAGATATCCTTCTCT+TGG | - | chr4.4:4418932-4418951 | MS.gene20202:CDS | 40.0% | |
| GTTTCAATTCCAAGGGTAAG+AGG | + | chr4.4:4418966-4418985 | None:intergenic | 40.0% | |
| TAAGTACTCACCTCCAAGAT+GGG | + | chr4.4:4418212-4418231 | None:intergenic | 40.0% | |
| TCAACTCTTCAAATCGAGCA+CGG | + | chr4.4:4418548-4418567 | None:intergenic | 40.0% | |
| TGATGGAAAGGAACCAAACA+AGG | - | chr4.4:4418713-4418732 | MS.gene20202:CDS | 40.0% | |
| TGGGATGTGATTACATGGTT+TGG | - | chr4.4:4417207-4417226 | MS.gene20202:CDS | 40.0% | |
| TGTAATTCGCCAATTCACCT+GGG | + | chr4.4:4417876-4417895 | None:intergenic | 40.0% | |
| TTGTAATTCGCCAATTCACC+TGG | + | chr4.4:4417877-4417896 | None:intergenic | 40.0% | |
| ! | AAACAGTTGTTTGCTGATCC+TGG | + | chr4.4:4419067-4419086 | None:intergenic | 40.0% |
| ! | GCGTCCCTTTTCATTTGTAA+TGG | + | chr4.4:4419494-4419513 | None:intergenic | 40.0% |
| ! | GTTTGTCCTTGTCACTGATT+TGG | + | chr4.4:4419642-4419661 | None:intergenic | 40.0% |
| ! | TTATCACTGCTGTTTACCAG+AGG | - | chr4.4:4419806-4419825 | MS.gene20202:intron | 40.0% |
| !! | GCTTATGGATTGGACAAGAA+AGG | - | chr4.4:4418079-4418098 | MS.gene20202:CDS | 40.0% |
| !! | TATGGATTGGACAAGAAAGG+TGG | - | chr4.4:4418082-4418101 | MS.gene20202:CDS | 40.0% |
| !!! | AAACACCTGGGATTTTTTGG+TGG | + | chr4.4:4419036-4419055 | None:intergenic | 40.0% |
| !!! | AACACCTGGGATTTTTTGGT+GGG | + | chr4.4:4419035-4419054 | None:intergenic | 40.0% |
| !!! | GGTAAACACCTGGGATTTTT+TGG | + | chr4.4:4419039-4419058 | None:intergenic | 40.0% |
| !!! | TGCAAGGAAGCATTTTGAGT+GGG | - | chr4.4:4418775-4418794 | MS.gene20202:CDS | 40.0% |
| AAAACAAACCTTGGAGCTGG+TGG | + | chr4.4:4419282-4419301 | None:intergenic | 45.0% | |
| AAACAAACCTTGGAGCTGGT+GGG | + | chr4.4:4419281-4419300 | None:intergenic | 45.0% | |
| AATGGAGATACCCATCTTGG+AGG | - | chr4.4:4418199-4418218 | MS.gene20202:intron | 45.0% | |
| ACAAAGGATTGCCGTCTTCT+CGG | - | chr4.4:4419234-4419253 | MS.gene20202:intron | 45.0% | |
| ACATCTGCTGCAAAAGAGGA+AGG | - | chr4.4:4417306-4417325 | MS.gene20202:intron | 45.0% | |
| ACCGACGATGAGAGATTGAT+TGG | - | chr4.4:4417465-4417484 | MS.gene20202:CDS | 45.0% | |
| ACTCAATTTCCACACGGACT+TGG | + | chr4.4:4418488-4418507 | None:intergenic | 45.0% | |
| AGTAAAGGATGGTGAGACCA+AGG | - | chr4.4:4417750-4417769 | MS.gene20202:CDS | 45.0% | |
| CAAAGGCAACTGCTTCATCA+GGG | + | chr4.4:4418746-4418765 | None:intergenic | 45.0% | |
| CAACTCTTCAAATCGAGCAC+GGG | + | chr4.4:4418547-4418566 | None:intergenic | 45.0% | |
| CACAAAACAAACCTTGGAGC+TGG | + | chr4.4:4419285-4419304 | None:intergenic | 45.0% | |
| CATCTGCTGCAAAAGAGGAA+GGG | - | chr4.4:4417307-4417326 | MS.gene20202:intron | 45.0% | |
| CCCAATAACAGTCCCTAACT+TGG | + | chr4.4:4417337-4417356 | None:intergenic | 45.0% | |
| CCCAATCAATCTCTCATCGT+CGG | + | chr4.4:4417469-4417488 | None:intergenic | 45.0% | |
| CCGACGATGAGAGATTGATT+GGG | - | chr4.4:4417466-4417485 | MS.gene20202:CDS | 45.0% | |
| CGACGATGAGAGATTGATTG+GGG | - | chr4.4:4417467-4417486 | MS.gene20202:CDS | 45.0% | |
| CGAGGAAGACAAGAAAGTGA+AGG | - | chr4.4:4419564-4419583 | MS.gene20202:intron | 45.0% | |
| CTTCTCACCATCATCTCCTT+AGG | - | chr4.4:4416590-4416609 | MS.gene20202:CDS | 45.0% | |
| CTTGTCTTTGATCTTGGAGG+TGG | - | chr4.4:4418118-4418137 | MS.gene20202:intron | 45.0% | |
| GAAATCATAGCCAACGACCA+AGG | - | chr4.4:4417411-4417430 | MS.gene20202:CDS | 45.0% | |
| GATACGATTTCCTTGGTCGT+TGG | + | chr4.4:4417424-4417443 | None:intergenic | 45.0% | |
| GTTCAAACCAGCAATGACAC+CGG | + | chr4.4:4418020-4418039 | None:intergenic | 45.0% | |
| TCGGTGAAAGAAACCCATGA+TGG | + | chr4.4:4417450-4417469 | None:intergenic | 45.0% | |
| TGCAACATCTGCTGCAAAAG+AGG | - | chr4.4:4417302-4417321 | MS.gene20202:intron | 45.0% | |
| TGCTGCCATTGCTTATGGAT+TGG | - | chr4.4:4418069-4418088 | MS.gene20202:CDS | 45.0% | |
| TGGAAAGGAACCAAACAAGG+GGG | - | chr4.4:4418716-4418735 | MS.gene20202:CDS | 45.0% | |
| ! | AGTTGTTTGCTGATCCTGGT+AGG | + | chr4.4:4419063-4419082 | None:intergenic | 45.0% |
| ! | CATCACGAATAGTCTTGCCA+AGG | + | chr4.4:4417840-4417859 | None:intergenic | 45.0% |
| ! | GACTTGTTCCGGAAGACAAT+GGG | - | chr4.4:4418573-4418592 | MS.gene20202:intron | 45.0% |
| ! | TGGAAGCACAAGGATTCCAA+AGG | - | chr4.4:4418665-4418684 | MS.gene20202:CDS | 45.0% |
| ! | TTCTTGTTGGTGGAAGCACA+AGG | - | chr4.4:4418655-4418674 | MS.gene20202:CDS | 45.0% |
| !! | CCGTGAAAGAAGCACTTGAA+TGG | - | chr4.4:4419707-4419726 | MS.gene20202:intron | 45.0% |
| !! | CTCGGGAACTTTGATTTGTC+TGG | - | chr4.4:4419252-4419271 | MS.gene20202:intron | 45.0% |
| !! | GAAAGAAGCACTTGAATGGC+TGG | - | chr4.4:4419711-4419730 | MS.gene20202:intron | 45.0% |
| !! | GGACAAACTTGCTGACAAGT+TGG | - | chr4.4:4419654-4419673 | MS.gene20202:intron | 45.0% |
| !! | TGACTTGTTCCGGAAGACAA+TGG | - | chr4.4:4418572-4418591 | MS.gene20202:intron | 45.0% |
| !! | TGTCATTGCTGGTTTGAACG+TGG | - | chr4.4:4418021-4418040 | MS.gene20202:CDS | 45.0% |
| !!! | ACACCTGGGATTTTTTGGTG+GGG | + | chr4.4:4419034-4419053 | None:intergenic | 45.0% |
| !!! | GCAAGGAAGCATTTTGAGTG+GGG | - | chr4.4:4418776-4418795 | MS.gene20202:intron | 45.0% |
| !!! | GTGCAAGGAAGCATTTTGAG+TGG | - | chr4.4:4418774-4418793 | MS.gene20202:CDS | 45.0% |
| AAGAAGGCAATGGACGATGC+TGG | - | chr4.4:4418603-4418622 | MS.gene20202:CDS | 50.0% | |
| AGCACTTGGAAAGCTGAGGA+GGG | - | chr4.4:4418425-4418444 | MS.gene20202:CDS | 50.0% | |
| AGGAAGGGACCACCAAGTTA+GGG | - | chr4.4:4417322-4417341 | MS.gene20202:intron | 50.0% | |
| AGGTGAGAGGAGTCTCACAA+AGG | - | chr4.4:4419218-4419237 | MS.gene20202:intron | 50.0% | |
| ATGGCTCGCTCTTCTTCTTG+CGG | - | chr4.4:4416557-4416576 | MS.gene20202:CDS | 50.0% | |
| CAAAGGATTGCCGTCTTCTC+GGG | - | chr4.4:4419235-4419254 | MS.gene20202:intron | 50.0% | |
| CAAGACTATTCGTGATGCCG+TGG | - | chr4.4:4417843-4417862 | MS.gene20202:CDS | 50.0% | |
| CATCCCCACCAAAAAATCCC+AGG | - | chr4.4:4419028-4419047 | MS.gene20202:CDS | 50.0% | |
| CCAAAGGCAACTGCTTCATC+AGG | + | chr4.4:4418747-4418766 | None:intergenic | 50.0% | |
| CCTGATGAAGCAGTTGCCTT+TGG | - | chr4.4:4418744-4418763 | MS.gene20202:CDS | 50.0% | |
| CGATGAGAGATTGATTGGGG+AGG | - | chr4.4:4417470-4417489 | MS.gene20202:CDS | 50.0% | |
| CTCTGATCAAAGTCCTCACC+TGG | + | chr4.4:4418339-4418358 | None:intergenic | 50.0% | |
| CTGGCTACTAAGAGCTCTCT+TGG | + | chr4.4:4418463-4418482 | None:intergenic | 50.0% | |
| CTGGTAGGTGGTAAACACCT+GGG | + | chr4.4:4419048-4419067 | None:intergenic | 50.0% | |
| CTTCAATGATGCTCAGAGGC+AGG | - | chr4.4:4417982-4418001 | MS.gene20202:CDS | 50.0% | |
| CTTGCCAAGGAATGCTTCAG+CGG | + | chr4.4:4417827-4417846 | None:intergenic | 50.0% | |
| GACAATGGGACCTGTGAAGA+AGG | - | chr4.4:4418587-4418606 | MS.gene20202:CDS | 50.0% | |
| GAGGGTGGTGAAGAAACCAA+AGG | - | chr4.4:4418798-4418817 | MS.gene20202:intron | 50.0% | |
| GAGGTGCAACATCCAAGAGA+AGG | + | chr4.4:4418947-4418966 | None:intergenic | 50.0% | |
| GATGTTGCACCTCTTACCCT+TGG | - | chr4.4:4418954-4418973 | MS.gene20202:CDS | 50.0% | |
| GTGGGGATGACAGTGTTTCT+AGG | + | chr4.4:4419017-4419036 | None:intergenic | 50.0% | |
| TCAAATCGAGCACGGGTAAG+TGG | + | chr4.4:4418540-4418559 | None:intergenic | 50.0% | |
| TCACAGGTCCCATTGTCTTC+CGG | + | chr4.4:4418584-4418603 | None:intergenic | 50.0% | |
| TCCATAAGCAATGGCAGCAG+CGG | + | chr4.4:4418068-4418087 | None:intergenic | 50.0% | |
| TCGTCCATTGCCTTCTTCAC+AGG | + | chr4.4:4418600-4418619 | None:intergenic | 50.0% | |
| TGAGCCAGGAGGAAATTGAC+CGG | - | chr4.4:4419515-4419534 | MS.gene20202:intron | 50.0% | |
| ! | ACAGAGCACTTGGAAAGCTG+AGG | - | chr4.4:4418421-4418440 | MS.gene20202:CDS | 50.0% |
| ! | ACTGCTGTTTACCAGAGGTC+AGG | - | chr4.4:4419811-4419830 | MS.gene20202:intron | 50.0% |
| ! | AGCAAGGACAACAGAGCACT+TGG | - | chr4.4:4418411-4418430 | MS.gene20202:CDS | 50.0% |
| ! | GAAACCGCTGAAGCATTCCT+TGG | - | chr4.4:4417820-4417839 | MS.gene20202:CDS | 50.0% |
| ! | TGTTTGCTGATCCTGGTAGG+TGG | + | chr4.4:4419060-4419079 | None:intergenic | 50.0% |
| !! | ATCATGGCACTGACTTCCTC+AGG | + | chr4.4:4417784-4417803 | None:intergenic | 50.0% |
| !! | TCATGGCACTGACTTCCTCA+GGG | + | chr4.4:4417783-4417802 | None:intergenic | 50.0% |
| !! | TGAGGGGTGTTGTACTCAAC+CGG | - | chr4.4:4419160-4419179 | MS.gene20202:intron | 50.0% |
| !!! | AGGAAGCATTTTGAGTGGGG+AGG | - | chr4.4:4418779-4418798 | MS.gene20202:intron | 50.0% |
| !!! | GGAAGCATTTTGAGTGGGGA+GGG | - | chr4.4:4418780-4418799 | MS.gene20202:intron | 50.0% |
| AATGACACCGGCATCCTTGG+TGG | + | chr4.4:4418008-4418027 | None:intergenic | 55.0% | |
| ACCGCTGCTGCCATTGCTTA+TGG | - | chr4.4:4418064-4418083 | MS.gene20202:CDS | 55.0% | |
| AGCAATGACACCGGCATCCT+TGG | + | chr4.4:4418011-4418030 | None:intergenic | 55.0% | |
| ATAAGCAATGGCAGCAGCGG+TGG | + | chr4.4:4418065-4418084 | None:intergenic | 55.0% | |
| CCAGGAGGAAATTGACCGGA+TGG | - | chr4.4:4419519-4419538 | MS.gene20202:intron | 55.0% | |
| CCAGGTGTTTACCACCTACC+AGG | - | chr4.4:4419046-4419065 | MS.gene20202:CDS | 55.0% | |
| CCATCCGGTCAATTTCCTCC+TGG | + | chr4.4:4419522-4419541 | None:intergenic | 55.0% | |
| CCTGGTAGGTGGTAAACACC+TGG | + | chr4.4:4419049-4419068 | None:intergenic | 55.0% | |
| GAGCACTTGGAAAGCTGAGG+AGG | - | chr4.4:4418424-4418443 | MS.gene20202:CDS | 55.0% | |
| GAGGAAGGGACCACCAAGTT+AGG | - | chr4.4:4417321-4417340 | MS.gene20202:intron | 55.0% | |
| GCTGTTTACCAGAGGTCAGG+TGG | - | chr4.4:4419814-4419833 | MS.gene20202:intron | 55.0% | |
| GGGACCTGTGAAGAAGGCAA+TGG | - | chr4.4:4418593-4418612 | MS.gene20202:CDS | 55.0% | |
| GGTCAATTTCCTCCTGGCTC+AGG | + | chr4.4:4419516-4419535 | None:intergenic | 55.0% | |
| GGTCACTGTCCCAGGTGAAT+TGG | - | chr4.4:4417864-4417883 | MS.gene20202:CDS | 55.0% | |
| GTCTTCCTCGGCAAACTCCT+CGG | + | chr4.4:4419554-4419573 | None:intergenic | 55.0% | |
| TAAGCAATGGCAGCAGCGGT+GGG | + | chr4.4:4418064-4418083 | None:intergenic | 55.0% | |
| TCAGGGTTGACCCCCTTGTT+TGG | + | chr4.4:4418729-4418748 | None:intergenic | 55.0% | |
| TCCTTGCACTGCAGCACCAA+AGG | + | chr4.4:4418763-4418782 | None:intergenic | 55.0% | |
| TGGCAGCTGTCAACCCTGAA+AGG | - | chr4.4:4417505-4417524 | MS.gene20202:intron | 55.0% | |
| TGGCTCGCTCTTCTTCTTGC+GGG | - | chr4.4:4416558-4416577 | MS.gene20202:CDS | 55.0% | |
| TTCACCTGGGACAGTGACCA+CGG | + | chr4.4:4417863-4417882 | None:intergenic | 55.0% | |
| TTCCTCAGGGCTGAACACCT+TGG | + | chr4.4:4417770-4417789 | None:intergenic | 55.0% | |
| !! | AAGGATGCCGGTGTCATTGC+TGG | - | chr4.4:4418010-4418029 | MS.gene20202:CDS | 55.0% |
| !! | AGCATTTTGAGTGGGGAGGG+TGG | - | chr4.4:4418783-4418802 | MS.gene20202:intron | 55.0% |
| !! | AGGGGTGTTGTACTCAACCG+GGG | - | chr4.4:4419162-4419181 | MS.gene20202:intron | 55.0% |
| !! | GAGGGGTGTTGTACTCAACC+GGG | - | chr4.4:4419161-4419180 | MS.gene20202:intron | 55.0% |
| !! | TTTCCACACGGACTTGGTGC+TGG | + | chr4.4:4418482-4418501 | None:intergenic | 55.0% |
| AGCTCCAGGTGGTGCATCAG+GGG | - | chr4.4:4419837-4419856 | MS.gene20202:intron | 60.0% | |
| CCTCGGCTTCACGAACCATC+CGG | + | chr4.4:4419537-4419556 | None:intergenic | 60.0% | |
| CTGGAATCCCACCAGCTCCA+AGG | - | chr4.4:4419271-4419290 | MS.gene20202:intron | 60.0% | |
| GAGCTCCAGGTGGTGCATCA+GGG | - | chr4.4:4419836-4419855 | MS.gene20202:intron | 60.0% | |
| TAGCCAGCACCAAGTCCGTG+TGG | - | chr4.4:4418476-4418495 | MS.gene20202:intron | 60.0% | |
| TGAAAAGGGACGCCTGAGCC+AGG | - | chr4.4:4419501-4419520 | MS.gene20202:intron | 60.0% | |
| TGAAGCCGAGGAGTTTGCCG+AGG | - | chr4.4:4419546-4419565 | MS.gene20202:intron | 60.0% | |
| TGGGGAGGCTGCGAAGAATC+TGG | - | chr4.4:4417485-4417504 | MS.gene20202:CDS | 60.0% | |
| TGGTGCATCAGGGGAAGGAG+AGG | - | chr4.4:4419846-4419865 | MS.gene20202:CDS | 60.0% | |
| ! | AGGGCAGAAGACAAGGGCAC+AGG | - | chr4.4:4419451-4419470 | MS.gene20202:intron | 60.0% |
| ! | GACCAAGGTGTTCAGCCCTG+AGG | - | chr4.4:4417765-4417784 | MS.gene20202:CDS | 60.0% |
| !! | GCCTTTGGTGCTGCAGTGCA+AGG | - | chr4.4:4418759-4418778 | MS.gene20202:CDS | 60.0% |
| AAAGGGACGCCTGAGCCAGG+AGG | - | chr4.4:4419504-4419523 | MS.gene20202:intron | 65.0% | |
| AGGCAGGCCACCAAGGATGC+CGG | - | chr4.4:4417998-4418017 | MS.gene20202:CDS | 65.0% | |
| AGGTCAGGTGGAGCTCCAGG+TGG | - | chr4.4:4419826-4419845 | MS.gene20202:intron | 65.0% | |
| CAGAGGTCAGGTGGAGCTCC+AGG | - | chr4.4:4419823-4419842 | MS.gene20202:intron | 65.0% | |
| CCAGGTGGTGCATCAGGGGA+AGG | - | chr4.4:4419841-4419860 | MS.gene20202:intron | 65.0% | |
| CCGGATGGTTCGTGAAGCCG+AGG | - | chr4.4:4419534-4419553 | MS.gene20202:intron | 65.0% | |
| CCTTCCCCTGATGCACCACC+TGG | + | chr4.4:4419844-4419863 | None:intergenic | 65.0% | |
| CTGGAGCTCCACCTGACCTC+TGG | + | chr4.4:4419825-4419844 | None:intergenic | 65.0% | |
| GATGCCGTGGTCACTGTCCC+AGG | - | chr4.4:4417856-4417875 | MS.gene20202:CDS | 65.0% | |
| GGAGCTCCAGGTGGTGCATC+AGG | - | chr4.4:4419835-4419854 | MS.gene20202:intron | 65.0% | |
| TGCTCAGAGGCAGGCCACCA+AGG | - | chr4.4:4417991-4418010 | MS.gene20202:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 4416557 | 4419900 | 4416557 | ID=MS.gene20202 |
| chr4.4 | mRNA | 4416557 | 4419900 | 4416557 | ID=MS.gene20202.t1;Parent=MS.gene20202 |
| chr4.4 | exon | 4419846 | 4419900 | 4419846 | ID=MS.gene20202.t1.exon1;Parent=MS.gene20202.t1 |
| chr4.4 | CDS | 4419846 | 4419900 | 4419846 | ID=cds.MS.gene20202.t1;Parent=MS.gene20202.t1 |
| chr4.4 | exon | 4418895 | 4419165 | 4418895 | ID=MS.gene20202.t1.exon2;Parent=MS.gene20202.t1 |
| chr4.4 | CDS | 4418895 | 4419165 | 4418895 | ID=cds.MS.gene20202.t1;Parent=MS.gene20202.t1 |
| chr4.4 | exon | 4418580 | 4418794 | 4418580 | ID=MS.gene20202.t1.exon3;Parent=MS.gene20202.t1 |
| chr4.4 | CDS | 4418580 | 4418794 | 4418580 | ID=cds.MS.gene20202.t1;Parent=MS.gene20202.t1 |
| chr4.4 | exon | 4418237 | 4418479 | 4418237 | ID=MS.gene20202.t1.exon4;Parent=MS.gene20202.t1 |
| chr4.4 | CDS | 4418237 | 4418479 | 4418237 | ID=cds.MS.gene20202.t1;Parent=MS.gene20202.t1 |
| chr4.4 | exon | 4417638 | 4418117 | 4417638 | ID=MS.gene20202.t1.exon5;Parent=MS.gene20202.t1 |
| chr4.4 | CDS | 4417638 | 4418117 | 4417638 | ID=cds.MS.gene20202.t1;Parent=MS.gene20202.t1 |
| chr4.4 | exon | 4417363 | 4417517 | 4417363 | ID=MS.gene20202.t1.exon6;Parent=MS.gene20202.t1 |
| chr4.4 | CDS | 4417363 | 4417517 | 4417363 | ID=cds.MS.gene20202.t1;Parent=MS.gene20202.t1 |
| chr4.4 | exon | 4417165 | 4417247 | 4417165 | ID=MS.gene20202.t1.exon7;Parent=MS.gene20202.t1 |
| chr4.4 | CDS | 4417165 | 4417247 | 4417165 | ID=cds.MS.gene20202.t1;Parent=MS.gene20202.t1 |
| chr4.4 | exon | 4416557 | 4417064 | 4416557 | ID=MS.gene20202.t1.exon8;Parent=MS.gene20202.t1 |
| chr4.4 | CDS | 4416557 | 4417064 | 4416557 | ID=cds.MS.gene20202.t1;Parent=MS.gene20202.t1 |
| Gene Sequence |
| Protein sequence |
