Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38302.t1 | XP_013454585.1 | 100 | 951 | 0 | 0 | 1 | 951 | 1 | 951 | 0.00E+00 | 1815 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38302.t1 | Q9SV21 | 81.3 | 950 | 176 | 2 | 1 | 950 | 1 | 948 | 0.0e+00 | 1520.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38302.t1 | A0A072UGQ1 | 100.0 | 951 | 0 | 0 | 1 | 951 | 1 | 951 | 0.0e+00 | 1815.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049180 | MS.gene38302 | 0.802801 | 4.72E-49 | -1.69E-46 |
| MS.gene049193 | MS.gene38302 | 0.853539 | 2.24E-61 | -1.69E-46 |
| MS.gene049209 | MS.gene38302 | 0.80826 | 3.38E-50 | -1.69E-46 |
| MS.gene049227 | MS.gene38302 | 0.837569 | 4.81E-57 | -1.69E-46 |
| MS.gene049261 | MS.gene38302 | 0.835355 | 1.76E-56 | -1.69E-46 |
| MS.gene049807 | MS.gene38302 | 0.832106 | 1.14E-55 | -1.69E-46 |
| MS.gene050224 | MS.gene38302 | 0.822015 | 2.97E-53 | -1.69E-46 |
| MS.gene050257 | MS.gene38302 | 0.854699 | 1.03E-61 | -1.69E-46 |
| MS.gene050258 | MS.gene38302 | 0.839676 | 1.37E-57 | -1.69E-46 |
| MS.gene050297 | MS.gene38302 | 0.805889 | 1.07E-49 | -1.69E-46 |
| MS.gene050348 | MS.gene38302 | 0.8289 | 6.95E-55 | -1.69E-46 |
| MS.gene050551 | MS.gene38302 | 0.822375 | 2.45E-53 | -1.69E-46 |
| MS.gene050817 | MS.gene38302 | 0.82975 | 4.32E-55 | -1.69E-46 |
| MS.gene050818 | MS.gene38302 | 0.820321 | 7.30E-53 | -1.69E-46 |
| MS.gene050894 | MS.gene38302 | 0.86929 | 3.46E-66 | -1.69E-46 |
| MS.gene051020 | MS.gene38302 | 0.803337 | 3.66E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene38302 | 0.841371 | 4.95E-58 | -1.69E-46 |
| MS.gene051381 | MS.gene38302 | 0.824373 | 8.36E-54 | -1.69E-46 |
| MS.gene051642 | MS.gene38302 | 0.815597 | 8.52E-52 | -1.69E-46 |
| MS.gene052307 | MS.gene38302 | 0.83024 | 3.28E-55 | -1.69E-46 |
| MS.gene052514 | MS.gene38302 | 0.828405 | 9.15E-55 | -1.69E-46 |
| MS.gene052609 | MS.gene38302 | 0.880412 | 5.61E-70 | -1.69E-46 |
| MS.gene052985 | MS.gene38302 | 0.806027 | 1.00E-49 | -1.69E-46 |
| MS.gene053118 | MS.gene38302 | 0.800799 | 1.22E-48 | -1.69E-46 |
| MS.gene053143 | MS.gene38302 | 0.961807 | 3.93E-120 | -1.69E-46 |
| MS.gene053144 | MS.gene38302 | 0.822637 | 2.13E-53 | -1.69E-46 |
| MS.gene053171 | MS.gene38302 | 0.820188 | 7.82E-53 | -1.69E-46 |
| MS.gene053620 | MS.gene38302 | 0.802602 | 5.19E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene38302 | 0.849807 | 2.55E-60 | -1.69E-46 |
| MS.gene054584 | MS.gene38302 | 0.819816 | 9.52E-53 | -1.69E-46 |
| MS.gene054585 | MS.gene38302 | 0.976399 | 9.44E-142 | -1.69E-46 |
| MS.gene054824 | MS.gene38302 | 0.85311 | 2.97E-61 | -1.69E-46 |
| MS.gene055469 | MS.gene38302 | 0.803883 | 2.82E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene38302 | 0.826433 | 2.72E-54 | -1.69E-46 |
| MS.gene058015 | MS.gene38302 | 0.817984 | 2.48E-52 | -1.69E-46 |
| MS.gene058649 | MS.gene38302 | 0.850904 | 1.26E-60 | -1.69E-46 |
| MS.gene05870 | MS.gene38302 | 0.80778 | 4.28E-50 | -1.69E-46 |
| MS.gene05938 | MS.gene38302 | 0.82173 | 3.46E-53 | -1.69E-46 |
| MS.gene059778 | MS.gene38302 | 0.845899 | 3.04E-59 | -1.69E-46 |
| MS.gene060077 | MS.gene38302 | 0.800689 | 1.28E-48 | -1.69E-46 |
| MS.gene060342 | MS.gene38302 | -0.802128 | 6.50E-49 | -1.69E-46 |
| MS.gene060343 | MS.gene38302 | -0.800486 | 1.41E-48 | -1.69E-46 |
| MS.gene061006 | MS.gene38302 | 0.848897 | 4.57E-60 | -1.69E-46 |
| MS.gene061100 | MS.gene38302 | 0.850443 | 1.69E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76242 | MS.gene38302 | PPI |
| MS.gene053143 | MS.gene38302 | PPI |
| MS.gene02789 | MS.gene38302 | PPI |
| MS.gene74608 | MS.gene38302 | PPI |
| MS.gene74984 | MS.gene38302 | PPI |
| MS.gene054585 | MS.gene38302 | PPI |
| MS.gene63417 | MS.gene38302 | PPI |
| MS.gene029334 | MS.gene38302 | PPI |
| MS.gene065067 | MS.gene38302 | PPI |
| MS.gene02023 | MS.gene38302 | PPI |
| MS.gene003223 | MS.gene38302 | PPI |
| MS.gene76243 | MS.gene38302 | PPI |
| MS.gene74983 | MS.gene38302 | PPI |
| MS.gene029335 | MS.gene38302 | PPI |
| MS.gene065068 | MS.gene38302 | PPI |
| MS.gene034150 | MS.gene38302 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38302.t1 | MTR_4g008250 | 100.000 | 951 | 0 | 0 | 1 | 951 | 1 | 951 | 0.0 | 1955 |
| MS.gene38302.t1 | MTR_7g112920 | 66.667 | 291 | 76 | 6 | 43 | 330 | 1 | 273 | 1.94e-114 | 352 |
| MS.gene38302.t1 | MTR_3g071150 | 82.258 | 186 | 18 | 2 | 1 | 186 | 1 | 171 | 8.56e-93 | 294 |
| MS.gene38302.t1 | MTR_4g132140 | 72.034 | 118 | 22 | 1 | 94 | 211 | 1 | 107 | 3.92e-50 | 172 |
| MS.gene38302.t1 | MTR_7g112940 | 68.367 | 98 | 25 | 2 | 856 | 951 | 52 | 145 | 1.34e-33 | 126 |
| MS.gene38302.t1 | MTR_5g019590 | 70.312 | 64 | 19 | 0 | 610 | 673 | 73 | 136 | 1.64e-22 | 95.1 |
| MS.gene38302.t1 | MTR_4g132130 | 64.384 | 73 | 24 | 2 | 314 | 385 | 1 | 72 | 2.00e-22 | 92.4 |
| MS.gene38302.t1 | MTR_6g051970 | 63.077 | 65 | 18 | 1 | 137 | 201 | 1 | 59 | 3.73e-21 | 88.2 |
| MS.gene38302.t1 | MTR_6g089270 | 56.250 | 80 | 29 | 1 | 128 | 207 | 1 | 74 | 1.80e-19 | 84.0 |
| MS.gene38302.t1 | MTR_4g076210 | 21.674 | 466 | 312 | 12 | 21 | 461 | 19 | 456 | 9.94e-15 | 79.3 |
| MS.gene38302.t1 | MTR_6g044465 | 51.250 | 80 | 34 | 1 | 594 | 673 | 1 | 75 | 1.57e-14 | 70.1 |
| MS.gene38302.t1 | MTR_3g008780 | 65.385 | 52 | 18 | 0 | 622 | 673 | 88 | 139 | 5.21e-14 | 71.2 |
| MS.gene38302.t1 | MTR_4g008310 | 100.000 | 35 | 0 | 0 | 884 | 918 | 41 | 75 | 5.86e-14 | 74.7 |
| MS.gene38302.t1 | MTR_7g056277 | 67.857 | 56 | 18 | 0 | 618 | 673 | 198 | 253 | 6.56e-14 | 76.3 |
| MS.gene38302.t1 | MTR_6g046370 | 63.462 | 52 | 19 | 0 | 622 | 673 | 8 | 59 | 2.39e-13 | 66.6 |
| MS.gene38302.t1 | MTR_8g470140 | 63.462 | 52 | 19 | 0 | 622 | 673 | 8 | 59 | 2.93e-13 | 65.9 |
| MS.gene38302.t1 | MTR_2g074950 | 63.462 | 52 | 19 | 0 | 622 | 673 | 25 | 76 | 4.86e-13 | 65.9 |
| MS.gene38302.t1 | MTR_0576s0010 | 61.538 | 52 | 20 | 0 | 622 | 673 | 13 | 64 | 8.08e-13 | 65.1 |
| MS.gene38302.t1 | MTR_3g024060 | 63.462 | 52 | 19 | 0 | 622 | 673 | 131 | 182 | 4.50e-12 | 66.2 |
| MS.gene38302.t1 | MTR_4g069920 | 22.816 | 412 | 267 | 13 | 36 | 422 | 48 | 433 | 1.49e-11 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38302.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 1 | 948 | 0.0 | 1622 |
| MS.gene38302.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 1 | 948 | 0.0 | 1622 |
| MS.gene38302.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 1 | 948 | 0.0 | 1622 |
| MS.gene38302.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 1 | 948 | 0.0 | 1622 |
| MS.gene38302.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 1 | 948 | 0.0 | 1622 |
| MS.gene38302.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 1 | 948 | 0.0 | 1622 |
| MS.gene38302.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 1 | 948 | 0.0 | 1622 |
| MS.gene38302.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 24 | 971 | 0.0 | 1621 |
| MS.gene38302.t1 | AT4G31480 | 81.263 | 950 | 176 | 2 | 1 | 950 | 24 | 971 | 0.0 | 1621 |
| MS.gene38302.t1 | AT4G31490 | 81.013 | 948 | 178 | 2 | 1 | 948 | 1 | 946 | 0.0 | 1610 |
| MS.gene38302.t1 | AT4G31490 | 81.013 | 948 | 178 | 2 | 1 | 948 | 1 | 946 | 0.0 | 1610 |
| MS.gene38302.t1 | AT4G31490 | 81.013 | 948 | 178 | 2 | 1 | 948 | 1 | 946 | 0.0 | 1610 |
| MS.gene38302.t1 | AT4G23460 | 21.245 | 466 | 314 | 12 | 21 | 461 | 19 | 456 | 2.82e-14 | 77.8 |
| MS.gene38302.t1 | AT4G11380 | 21.459 | 466 | 313 | 12 | 21 | 461 | 19 | 456 | 2.95e-13 | 74.7 |
| MS.gene38302.t1 | AT4G11380 | 21.369 | 482 | 321 | 13 | 5 | 461 | 30 | 478 | 1.54e-12 | 72.4 |
Find 216 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATCTGTTTGCTTGATTC+TGG | 0.132054 | 4.3:+87092862 | None:intergenic |
| TCTTGTGCTCTGTGGATTAT+TGG | 0.193178 | 4.3:-87094151 | MS.gene38302:CDS |
| GAAAGTTTGTAGGAATAATA+AGG | 0.193674 | 4.3:-87094812 | MS.gene38302:CDS |
| TACTTGTGCTATTAAGTTTC+CGG | 0.200425 | 4.3:-87094353 | MS.gene38302:CDS |
| TTGAGATCTCTGATTCTTTC+GGG | 0.206526 | 4.3:-87093863 | MS.gene38302:CDS |
| TTCTATCATCACTAGGCTTT+TGG | 0.218921 | 4.3:-87094209 | MS.gene38302:CDS |
| CTTTCGGGTGATTTCTTCCT+TGG | 0.227308 | 4.3:-87093848 | MS.gene38302:CDS |
| TGACAGATTAGGATCATTTC+AGG | 0.238060 | 4.3:+87095228 | None:intergenic |
| ACGAGCTTAAGAGGGATAAT+AGG | 0.244193 | 4.3:-87094591 | MS.gene38302:CDS |
| ATCCTCAGAGATGGTGTAAA+AGG | 0.264720 | 4.3:+87094057 | None:intergenic |
| ATGTTTGGAGTTAGCAACTA+TGG | 0.269674 | 4.3:-87092929 | MS.gene38302:CDS |
| CTTGAGATCTCTGATTCTTT+CGG | 0.271553 | 4.3:-87093864 | MS.gene38302:CDS |
| GAGGGATAATAGGGAGATTA+TGG | 0.272228 | 4.3:-87094581 | MS.gene38302:CDS |
| GCATTTGTTGATGGATTTCT+TGG | 0.285633 | 4.3:-87094311 | MS.gene38302:CDS |
| CAGGGATCTCTGTCTTCTAT+TGG | 0.298380 | 4.3:-87093890 | MS.gene38302:CDS |
| AAGGTTTCTTCCACTGAAAC+TGG | 0.299306 | 4.3:-87092829 | MS.gene38302:CDS |
| TTCGAGAGATTCTTTGATTT+CGG | 0.304898 | 4.3:+87095443 | None:intergenic |
| TTTCGGGTGATTTCTTCCTT+GGG | 0.305867 | 4.3:-87093847 | MS.gene38302:CDS |
| TGGATACTTTCTATCAGATT+CGG | 0.310141 | 4.3:-87094189 | MS.gene38302:CDS |
| GCAAGATGAGAGGGAGTTCC+TGG | 0.315233 | 4.3:-87090960 | MS.gene38302:CDS |
| ACAGTTACAAATGGTGGTTT+TGG | 0.320506 | 4.3:-87094845 | MS.gene38302:CDS |
| TAGGGAGATTATGGTTGATA+TGG | 0.324072 | 4.3:-87094572 | MS.gene38302:CDS |
| AGGGAATTGCTCTGAGTCTT+GGG | 0.325449 | 4.3:-87090446 | MS.gene38302:CDS |
| GATTATGGTTGATATGGTTA+TGG | 0.347749 | 4.3:-87094566 | MS.gene38302:CDS |
| ATATGGTTATGGATGTCCTT+AGG | 0.354045 | 4.3:-87094555 | MS.gene38302:CDS |
| GGATACTTTCTATCAGATTC+GGG | 0.357062 | 4.3:-87094188 | MS.gene38302:CDS |
| ACTCGACCACTGTGTCTTCT+AGG | 0.357892 | 4.3:-87093994 | MS.gene38302:CDS |
| AACTCTCCAGAATTTATGTT+TGG | 0.360698 | 4.3:-87092944 | MS.gene38302:CDS |
| TGCTATTAAGTTTCCGGAGG+TGG | 0.364681 | 4.3:-87094347 | MS.gene38302:CDS |
| GCAATCATGCTTCTCCTTAA+CGG | 0.368170 | 4.3:-87095381 | MS.gene38302:CDS |
| ATGATAGAAACACGCAGCTT+AGG | 0.375297 | 4.3:+87094223 | None:intergenic |
| TTCCTTCTAATATCATGATT+AGG | 0.375355 | 4.3:+87094520 | None:intergenic |
| TGTTGAGAAATTTCTTGTTT+CGG | 0.377476 | 4.3:-87094980 | MS.gene38302:CDS |
| TACTGTTGTGCATTTGTTGA+TGG | 0.380765 | 4.3:-87094320 | MS.gene38302:CDS |
| ACTGAAACTGGAGTTATATT+CGG | 0.381365 | 4.3:-87092817 | MS.gene38302:CDS |
| AAAGTTTGTAGGAATAATAA+GGG | 0.384005 | 4.3:-87094811 | MS.gene38302:CDS |
| TATTGATAGGATCATTGATT+GGG | 0.384961 | 4.3:-87094872 | MS.gene38302:CDS |
| CTAACTCCAAACATAAATTC+TGG | 0.384969 | 4.3:+87092938 | None:intergenic |
| CTCCTAATCATGATATTAGA+AGG | 0.385310 | 4.3:-87094522 | MS.gene38302:CDS |
| TGAGTATTGTTTGTCTCTTT+CGG | 0.395014 | 4.3:-87094128 | MS.gene38302:CDS |
| TTCACAGTCCTTGTTGATCA+TGG | 0.398314 | 4.3:-87093741 | MS.gene38302:CDS |
| ATCGGCTTAACGAGCTTAAG+AGG | 0.398378 | 4.3:-87094600 | MS.gene38302:CDS |
| CGAGCTTAAGAGGGATAATA+GGG | 0.400973 | 4.3:-87094590 | MS.gene38302:CDS |
| ATATTGATAGGATCATTGAT+TGG | 0.404295 | 4.3:-87094873 | MS.gene38302:CDS |
| ATTAGATTGCTGTGTAATAC+TGG | 0.411143 | 4.3:-87093638 | MS.gene38302:CDS |
| CTCTGAGGATGGAGAGGGTC+AGG | 0.412565 | 4.3:-87094044 | MS.gene38302:CDS |
| CAGGGAATTGCTCTGAGTCT+TGG | 0.412830 | 4.3:-87090447 | MS.gene38302:CDS |
| TCGCGGTCGGTGCAGAACTA+AGG | 0.413611 | 4.3:+87094698 | None:intergenic |
| TGCCTTTGCTTTAATCTCCT+CGG | 0.413901 | 4.3:+87093535 | None:intergenic |
| AATTGATTAAGAAAGTTTGT+AGG | 0.415829 | 4.3:-87094822 | MS.gene38302:CDS |
| GCGGGGAGCATGAGAAGAAT+GGG | 0.418503 | 4.3:-87094408 | MS.gene38302:CDS |
| TTGATTTCGGTTGCGAGTGC+TGG | 0.420907 | 4.3:+87095456 | None:intergenic |
| AATCGCATTCTTCAGCTCAC+TGG | 0.421276 | 4.3:-87093057 | MS.gene38302:CDS |
| AGGGATCTCTGTCTTCTATT+GGG | 0.424819 | 4.3:-87093889 | MS.gene38302:CDS |
| AGGAATAATAAGGGAGAGAA+AGG | 0.425300 | 4.3:-87094802 | MS.gene38302:CDS |
| AGAAATTTCTCAACAATCTC+AGG | 0.429922 | 4.3:+87094988 | None:intergenic |
| TCTATCAGATTCGGGCTGCT+AGG | 0.430384 | 4.3:-87094180 | MS.gene38302:CDS |
| CATTTGTTGATGGATTTCTT+GGG | 0.431544 | 4.3:-87094310 | MS.gene38302:CDS |
| GAGAACTTTACCGCGAGAAT+CGG | 0.432166 | 4.3:+87095251 | None:intergenic |
| TCTCTTGTTCAGCTCTGCAT+TGG | 0.438702 | 4.3:-87090604 | MS.gene38302:intron |
| GAGGAATGGTTTCGCCGTTA+AGG | 0.439775 | 4.3:+87095367 | None:intergenic |
| TCTGGAGAGTTTCCTTGGTC+CGG | 0.441384 | 4.3:+87092956 | None:intergenic |
| AGCGGGGAGCATGAGAAGAA+TGG | 0.445155 | 4.3:-87094409 | MS.gene38302:CDS |
| TGATAGAAACACGCAGCTTA+GGG | 0.445334 | 4.3:+87094224 | None:intergenic |
| TAAATTCTGGAGAGTTTCCT+TGG | 0.445694 | 4.3:+87092951 | None:intergenic |
| TCATGAGAATCATTATCAAT+TGG | 0.450088 | 4.3:+87093677 | None:intergenic |
| TATGGTTATGGATGTCCTTA+GGG | 0.454595 | 4.3:-87094554 | MS.gene38302:CDS |
| CTTTAATCTCCTCGGTCTCA+CGG | 0.455907 | 4.3:+87093543 | None:intergenic |
| CGGTGATTTCGAGGTAAAGA+AGG | 0.456385 | 4.3:+87095280 | None:intergenic |
| AAGGAACTCACGGTGGAGTC+AGG | 0.457955 | 4.3:+87090906 | None:intergenic |
| CAAGACTCAGAGCAATTCCC+TGG | 0.458458 | 4.3:+87090448 | None:intergenic |
| TGACATTCATATTGATATCA+TGG | 0.459711 | 4.3:-87092737 | MS.gene38302:CDS |
| GACATCAAAGGCTGTGCAGC+AGG | 0.460529 | 4.3:-87094020 | MS.gene38302:CDS |
| GTCCCATCGGCAAGAATCGC+AGG | 0.461816 | 4.3:+87093968 | None:intergenic |
| GACAAAGCTTATCTTAAGGT+TGG | 0.462489 | 4.3:-87093804 | MS.gene38302:CDS |
| GTCATAGGTTGCTGTAAATA+CGG | 0.462568 | 4.3:-87090987 | MS.gene38302:intron |
| ATGAGAAGAATGGGGAGTAT+AGG | 0.463060 | 4.3:-87094399 | MS.gene38302:CDS |
| CGCGGTCGGTGCAGAACTAA+GGG | 0.465199 | 4.3:+87094699 | None:intergenic |
| TACACCGAAGAATATTGATC+AGG | 0.471600 | 4.3:-87094470 | MS.gene38302:CDS |
| CAGTCTCAAGAGCAGCACTC+TGG | 0.477594 | 4.3:+87093936 | None:intergenic |
| TTGATAATGATTCTCATGAC+AGG | 0.479100 | 4.3:-87093673 | MS.gene38302:CDS |
| CACTGACAAAGCTTATCTTA+AGG | 0.479698 | 4.3:-87093808 | MS.gene38302:CDS |
| CTATCAGATTCGGGCTGCTA+GGG | 0.480565 | 4.3:-87094179 | MS.gene38302:CDS |
| CTCAGCCCACATAGTTCTAA+AGG | 0.487112 | 4.3:+87092681 | None:intergenic |
| ATCGCATTCTTCAGCTCACT+GGG | 0.488030 | 4.3:-87093056 | MS.gene38302:CDS |
| AGAATCAAGCAAACAGATCA+AGG | 0.488212 | 4.3:-87092860 | MS.gene38302:CDS |
| CTCATCGTTCACTTCGACAA+AGG | 0.489294 | 4.3:-87095483 | MS.gene38302:CDS |
| GTCACCGCCTACCCTTGTGC+AGG | 0.489447 | 4.3:-87093909 | MS.gene38302:CDS |
| GTGATGAGATAAGGAAGATA+TGG | 0.490653 | 4.3:-87093616 | MS.gene38302:CDS |
| AGCAAGATGCTTCCAGTAAG+AGG | 0.494131 | 4.3:-87094957 | MS.gene38302:CDS |
| TTGTTCAGCTCTGCATTGGA+AGG | 0.494510 | 4.3:-87090600 | MS.gene38302:intron |
| AGGTTGTTAAGACGCAGAGC+GGG | 0.495077 | 4.3:-87094426 | MS.gene38302:CDS |
| CTTCACAAAGCTCTGCCTGC+AGG | 0.495433 | 4.3:+87093586 | None:intergenic |
| TAAAATCACTTTGAAGCAGA+AGG | 0.501025 | 4.3:-87090421 | MS.gene38302:CDS |
| GCTTATCTTAAGGTTGGAAG+AGG | 0.501167 | 4.3:-87093798 | MS.gene38302:CDS |
| TAAAAGTCGATGAGGTCATC+AGG | 0.502253 | 4.3:+87093494 | None:intergenic |
| GCAACTATTAAGCAGTGTCT+TGG | 0.506903 | 4.3:-87094088 | MS.gene38302:CDS |
| TCCTGCATCTTGTGCTGATG+TGG | 0.507317 | 4.3:-87092704 | MS.gene38302:CDS |
| GGTTGTTATGATGCTTAAGA+AGG | 0.507964 | 4.3:-87094449 | MS.gene38302:CDS |
| ACAACCTGATCAATATTCTT+CGG | 0.518597 | 4.3:+87094466 | None:intergenic |
| TGAAGCTTATTGTGCTTGAT+CGG | 0.519817 | 4.3:-87094618 | MS.gene38302:CDS |
| TCCTCAGAGATGGTGTAAAA+GGG | 0.521024 | 4.3:+87094058 | None:intergenic |
| AGTGGAAGAAACCTTGATGT+TGG | 0.521670 | 4.3:+87092837 | None:intergenic |
| TAGACTTGATAATGTGGCCC+AGG | 0.522945 | 4.3:+87090942 | None:intergenic |
| GCCACATCAGCACAAGATGC+AGG | 0.523769 | 4.3:+87092703 | None:intergenic |
| TTGATGTTACTGTCATCAAC+CGG | 0.524042 | 4.3:-87092975 | MS.gene38302:CDS |
| AGGCCTGCGATTCTTGCCGA+TGG | 0.526847 | 4.3:-87093971 | MS.gene38302:CDS |
| GACAGATTAGGATCATTTCA+GGG | 0.527691 | 4.3:+87095229 | None:intergenic |
| TGTTATGATGCTTAAGAAGG+AGG | 0.528121 | 4.3:-87094446 | MS.gene38302:CDS |
| TGTTTGGAGTTAGCAACTAT+GGG | 0.530203 | 4.3:-87092928 | MS.gene38302:CDS |
| AGTCTCAAGAGCAGCACTCT+GGG | 0.531103 | 4.3:+87093937 | None:intergenic |
| ACCCTCTCCATCCTCAGAGA+TGG | 0.532455 | 4.3:+87094048 | None:intergenic |
| TACAAATGTTGCGTCTGCTA+TGG | 0.534308 | 4.3:-87094284 | MS.gene38302:CDS |
| TCTCTTTCGGAGGTTGAGAG+TGG | 0.534403 | 4.3:-87094115 | MS.gene38302:CDS |
| CACAAGGGTAGGCGGTGACA+TGG | 0.536144 | 4.3:+87093913 | None:intergenic |
| TACGGTATTGCAAGATGAGA+GGG | 0.541044 | 4.3:-87090969 | MS.gene38302:CDS |
| GACGATCTTAAACGTGCCAC+TGG | 0.541667 | 4.3:-87093117 | MS.gene38302:CDS |
| GAGGTCATCAGGCTGTGCAT+TGG | 0.542020 | 4.3:+87093505 | None:intergenic |
| CATCGCAAGTGAGGACGTAA+CGG | 0.542360 | 4.3:+87095325 | None:intergenic |
| ATGTGGCCTTTAGAACTATG+TGG | 0.543399 | 4.3:-87092687 | MS.gene38302:CDS |
| TCTGTTTATAAGCTTCCTCA+AGG | 0.549635 | 4.3:-87095033 | MS.gene38302:CDS |
| ACATATGCTTCAGCATAGAC+AGG | 0.550275 | 4.3:+87093024 | None:intergenic |
| GGGTTTGTTCTTGTGCTCTG+TGG | 0.551774 | 4.3:-87094159 | MS.gene38302:CDS |
| ACAGATCAAGGCCAACATCA+AGG | 0.551932 | 4.3:-87092848 | MS.gene38302:CDS |
| TGAGCTCGAAGATGAGGTGC+AGG | 0.552537 | 4.3:-87093139 | MS.gene38302:CDS |
| TGAGATAAGGAAGATATGGC+TGG | 0.554553 | 4.3:-87093612 | MS.gene38302:CDS |
| ACACCGCGAATAAATTCGTT+CGG | 0.559084 | 4.3:+87095180 | None:intergenic |
| CTCAAAAGTTGAAGTTAACA+AGG | 0.559317 | 4.3:-87093768 | MS.gene38302:CDS |
| GTATAGGCAGATGTTGGTGC+AGG | 0.560283 | 4.3:-87094383 | MS.gene38302:CDS |
| GGCCTGCGATTCTTGCCGAT+GGG | 0.560801 | 4.3:-87093970 | MS.gene38302:CDS |
| ATGGTCTCAATGCTGCAGCT+TGG | 0.561190 | 4.3:-87093722 | MS.gene38302:CDS |
| AGATATGGCTGGAATCCTGC+AGG | 0.561257 | 4.3:-87093601 | MS.gene38302:CDS |
| TGTTTATAAGCTTCCTCAAG+GGG | 0.563929 | 4.3:-87095031 | MS.gene38302:CDS |
| TCACCGAACGAATTTATTCG+CGG | 0.565447 | 4.3:-87095183 | MS.gene38302:CDS |
| CTGTTTATAAGCTTCCTCAA+GGG | 0.566708 | 4.3:-87095032 | MS.gene38302:CDS |
| ACAACAGTACTCGCCACCTC+CGG | 0.567962 | 4.3:+87094334 | None:intergenic |
| ATTGATAGGATCATTGATTG+GGG | 0.572572 | 4.3:-87094871 | MS.gene38302:CDS |
| TTATCACTTGAAGAGCAGAA+AGG | 0.572845 | 4.3:-87093474 | MS.gene38302:intron |
| TGAGTTTGAGTGGGAAAACA+AGG | 0.573213 | 4.3:-87092662 | MS.gene38302:intron |
| GGAATAATAAGGGAGAGAAA+GGG | 0.575016 | 4.3:-87094801 | MS.gene38302:CDS |
| TTCGGGTGATTTCTTCCTTG+GGG | 0.575242 | 4.3:-87093846 | MS.gene38302:CDS |
| ACAGCATTTCGCCTCACGAA+AGG | 0.583171 | 4.3:+87095069 | None:intergenic |
| GAATCATTATCAATTGGATG+TGG | 0.584531 | 4.3:+87093683 | None:intergenic |
| GTATTGTTTGTCTCTTTCGG+AGG | 0.585959 | 4.3:-87094125 | MS.gene38302:CDS |
| CACCATCTCTGAGGATGGAG+AGG | 0.586391 | 4.3:-87094050 | MS.gene38302:CDS |
| TATTTGTAGACTTGATAATG+TGG | 0.587171 | 4.3:+87090936 | None:intergenic |
| CAAGATGAGAGGGAGTTCCT+GGG | 0.587875 | 4.3:-87090959 | MS.gene38302:CDS |
| CGGTGTGATCATCGCAAGTG+AGG | 0.588315 | 4.3:+87095316 | None:intergenic |
| GTAATACTGGTGATGAGATA+AGG | 0.591054 | 4.3:-87093625 | MS.gene38302:CDS |
| CCTCATCTTCGAGCTCAAGT+TGG | 0.591377 | 4.3:+87093145 | None:intergenic |
| CAGAATAAGAAGTAAAACCC+AGG | 0.591954 | 4.3:-87090466 | MS.gene38302:CDS |
| AGCAGCACTCTGGGTAGCAT+AGG | 0.593369 | 4.3:+87093946 | None:intergenic |
| TCAAGCAACTGTTCCCCTTG+AGG | 0.593800 | 4.3:+87095018 | None:intergenic |
| TGATAGGATCATTGATTGGG+GGG | 0.593801 | 4.3:-87094869 | MS.gene38302:CDS |
| GATAAAATCGAAGGAATCAA+CGG | 0.600291 | 4.3:+87095111 | None:intergenic |
| AGTGAGGACGTAACGGATGA+CGG | 0.601311 | 4.3:+87095332 | None:intergenic |
| GCAGCCGCTTTAATCGCGGT+CGG | 0.602852 | 4.3:+87094685 | None:intergenic |
| GCTGTTGTTTATGAATGTGC+TGG | 0.603920 | 4.3:-87094733 | MS.gene38302:CDS |
| TGCACCGACCGCGATTAAAG+CGG | 0.605018 | 4.3:-87094689 | MS.gene38302:CDS |
| TGGGGAGTATAGGCAGATGT+TGG | 0.605111 | 4.3:-87094389 | MS.gene38302:CDS |
| AAGACAGAGATCCCTGCACA+AGG | 0.605670 | 4.3:+87093897 | None:intergenic |
| GACCGAGGAGATTAAAGCAA+AGG | 0.607890 | 4.3:-87093537 | MS.gene38302:CDS |
| TCCAGATTCGATAAAATCGA+AGG | 0.607979 | 4.3:+87095102 | None:intergenic |
| TGTGGCCTTTAGAACTATGT+GGG | 0.608107 | 4.3:-87092686 | MS.gene38302:CDS |
| TACACAGCAATCTAATGCAA+AGG | 0.609288 | 4.3:+87093645 | None:intergenic |
| AGACAGAGATCCCTGCACAA+GGG | 0.610395 | 4.3:+87093898 | None:intergenic |
| GAATATAACTCCAGTTTCAG+TGG | 0.612897 | 4.3:+87092819 | None:intergenic |
| ATAACCGCTCAATTTACCAT+CGG | 0.613015 | 4.3:+87090491 | None:intergenic |
| TCACCGCCTACCCTTGTGCA+GGG | 0.613107 | 4.3:-87093908 | MS.gene38302:CDS |
| AGAGATCCCTGCACAAGGGT+AGG | 0.614667 | 4.3:+87093902 | None:intergenic |
| CCAACTTGAGCTCGAAGATG+AGG | 0.614861 | 4.3:-87093145 | MS.gene38302:CDS |
| AGAATAAGAAGTAAAACCCA+GGG | 0.615034 | 4.3:-87090465 | MS.gene38302:CDS |
| AAAATCACTTTGAAGCAGAA+GGG | 0.616042 | 4.3:-87090420 | MS.gene38302:CDS |
| TAGGAGTCGAAAGTGCCCTA+AGG | 0.616121 | 4.3:+87094539 | None:intergenic |
| TAAGCAGCGCCGTGAGACCG+AGG | 0.616463 | 4.3:-87093552 | MS.gene38302:CDS |
| TCTGCATTGGAAGGTGAGTG+TGG | 0.618873 | 4.3:-87090591 | MS.gene38302:CDS |
| AAGACTCAGAGCAATTCCCT+GGG | 0.620234 | 4.3:+87090449 | None:intergenic |
| ATACGGTATTGCAAGATGAG+AGG | 0.623355 | 4.3:-87090970 | MS.gene38302:CDS |
| TCGGCTTAACGAGCTTAAGA+GGG | 0.624554 | 4.3:-87094599 | MS.gene38302:CDS |
| CTATGTGGGCTGAGTTTGAG+TGG | 0.625334 | 4.3:-87092672 | MS.gene38302:CDS |
| TGCGTGTTTCTATCATCACT+AGG | 0.626366 | 4.3:-87094216 | MS.gene38302:CDS |
| CTGGGTAGCATAGGTCCCAT+CGG | 0.628553 | 4.3:+87093955 | None:intergenic |
| TGTTGCGTCTGCTATGGATG+TGG | 0.631879 | 4.3:-87094278 | MS.gene38302:CDS |
| GGTTGTTAAGACGCAGAGCG+GGG | 0.634964 | 4.3:-87094425 | MS.gene38302:CDS |
| ATCCTTTGTAAACTCTCCAG+TGG | 0.635004 | 4.3:+87093101 | None:intergenic |
| GGGAATTGCTCTGAGTCTTG+GGG | 0.635580 | 4.3:-87090445 | MS.gene38302:CDS |
| ATTCGCAGCCGCTTTAATCG+CGG | 0.638162 | 4.3:+87094681 | None:intergenic |
| ATGACGGTGATGAAGAGTTG+AGG | 0.642418 | 4.3:+87095348 | None:intergenic |
| GGTTGATGACAGTAACATCA+AGG | 0.643491 | 4.3:+87092977 | None:intergenic |
| GAAATCAAAGAATCTCTCGA+AGG | 0.643937 | 4.3:-87095441 | MS.gene38302:CDS |
| ACCATCTCTGAGGATGGAGA+GGG | 0.647823 | 4.3:-87094049 | MS.gene38302:CDS |
| AGAGGGTCAGGAGACATCAA+AGG | 0.653712 | 4.3:-87094032 | MS.gene38302:CDS |
| TTGTGCTATTAAGTTTCCGG+AGG | 0.654288 | 4.3:-87094350 | MS.gene38302:CDS |
| GGTGATGAAGAGTTGAGGAA+TGG | 0.658642 | 4.3:+87095353 | None:intergenic |
| AGCATTGAGAAGCAATCCGA+TGG | 0.659389 | 4.3:-87090507 | MS.gene38302:CDS |
| TACTGTCATCAACCGGACCA+AGG | 0.661558 | 4.3:-87092968 | MS.gene38302:CDS |
| CGGGGAGCATGAGAAGAATG+GGG | 0.661763 | 4.3:-87094407 | MS.gene38302:CDS |
| TGATTTCGAGGTAAAGAAGG+AGG | 0.662780 | 4.3:+87095283 | None:intergenic |
| CGACCACTGTGTCTTCTAGG+AGG | 0.662950 | 4.3:-87093991 | MS.gene38302:CDS |
| GATCCCTGCACAAGGGTAGG+CGG | 0.664720 | 4.3:+87093905 | None:intergenic |
| CATTGAGACCATGATCAACA+AGG | 0.665953 | 4.3:+87093733 | None:intergenic |
| GCGTCCACAAAACTACACTC+TGG | 0.667477 | 4.3:-87092887 | MS.gene38302:CDS |
| TGATAATGATTCTCATGACA+GGG | 0.668331 | 4.3:-87093672 | MS.gene38302:CDS |
| TACATGCGACAACTGCCCCA+AGG | 0.668408 | 4.3:+87093831 | None:intergenic |
| CAATCCGATGGTAAATTGAG+CGG | 0.668476 | 4.3:-87090495 | MS.gene38302:CDS |
| GAGGTTGTTAAGACGCAGAG+CGG | 0.671714 | 4.3:-87094427 | MS.gene38302:CDS |
| TCAAGTGATAAAAGTCGATG+AGG | 0.671720 | 4.3:+87093486 | None:intergenic |
| AGCATCGTCATCCTTTCGTG+AGG | 0.677322 | 4.3:-87095080 | MS.gene38302:CDS |
| TATGTGGGCTGAGTTTGAGT+GGG | 0.690862 | 4.3:-87092671 | MS.gene38302:CDS |
| TTGATAGGATCATTGATTGG+GGG | 0.691639 | 4.3:-87094870 | MS.gene38302:CDS |
| ACCGATAAAACCGATTCTCG+CGG | 0.697764 | 4.3:-87095261 | MS.gene38302:CDS |
| CTTTGTCGAAGTGAACGATG+AGG | 0.700062 | 4.3:+87095484 | None:intergenic |
| GAGCTTTGTGAAGATGCTCG+CGG | 0.718610 | 4.3:-87093576 | MS.gene38302:CDS |
| TGCCACTGGAGAGTTTACAA+AGG | 0.721810 | 4.3:-87093103 | MS.gene38302:CDS |
| AGCACATTCATAAACAACAG+CGG | 0.738106 | 4.3:+87094735 | None:intergenic |
| AGGCCTCCTAGAAGACACAG+TGG | 0.786866 | 4.3:+87093988 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTAAAATGGAAAAAT+GGG | + | chr4.3:87093376-87093395 | None:intergenic | 10.0% |
| !! | ATAAAAGTTGAAAAAGATTA+TGG | - | chr4.3:87093316-87093335 | MS.gene38302:intron | 15.0% |
| !! | TAGGATAAATCATATATATA+GGG | + | chr4.3:87093895-87093914 | None:intergenic | 15.0% |
| !! | TCCTAAATAAAACAAAAAAT+AGG | - | chr4.3:87094407-87094426 | MS.gene38302:CDS | 15.0% |
| !! | TTAGGATAAATCATATATAT+AGG | + | chr4.3:87093896-87093915 | None:intergenic | 15.0% |
| !!! | ATAATTTTATGTTGTTAATG+CGG | + | chr4.3:87094313-87094332 | None:intergenic | 15.0% |
| !!! | ATTATTTTCTAAGACAAATT+TGG | - | chr4.3:87094328-87094347 | MS.gene38302:CDS | 15.0% |
| !!! | ATTTTTAAAATGGAAAAATG+GGG | + | chr4.3:87093375-87093394 | None:intergenic | 15.0% |
| !!! | CAATTTTTAAAATGGAAAAA+TGG | + | chr4.3:87093377-87093396 | None:intergenic | 15.0% |
| !!! | GTATTAATAATTTTTTTTCG+TGG | - | chr4.3:87093606-87093625 | MS.gene38302:CDS | 15.0% |
| !!! | TCCTATTTTTTGTTTTATTT+AGG | + | chr4.3:87094411-87094430 | None:intergenic | 15.0% |
| !!! | TTATTTTCTAAGACAAATTT+GGG | - | chr4.3:87094329-87094348 | MS.gene38302:CDS | 15.0% |
| !!! | TTTTCATGCAATTTTTAAAA+TGG | + | chr4.3:87093385-87093404 | None:intergenic | 15.0% |
| !! | AAAATATAACAAATGAGAGA+AGG | + | chr4.3:87093286-87093305 | None:intergenic | 20.0% |
| !! | AAAGTTTGTAGGAATAATAA+GGG | - | chr4.3:87091097-87091116 | MS.gene38302:intron | 20.0% |
| !! | AATTGATTAAGAAAGTTTGT+AGG | - | chr4.3:87091086-87091105 | MS.gene38302:intron | 20.0% |
| !! | TAAAAAGAAAAACAGAATTC+TGG | + | chr4.3:87095084-87095103 | None:intergenic | 20.0% |
| !!! | ATCTTTTTACGAATATTGAT+AGG | - | chr4.3:87091023-87091042 | MS.gene38302:intron | 20.0% |
| !!! | GAATTCTGTTTTTCTTTTTA+AGG | - | chr4.3:87095084-87095103 | MS.gene38302:CDS | 20.0% |
| !!! | TAACATCAATTTTATGTCAT+AGG | - | chr4.3:87094906-87094925 | MS.gene38302:CDS | 20.0% |
| !!! | TATTTTCTAAGACAAATTTG+GGG | - | chr4.3:87094330-87094349 | MS.gene38302:CDS | 20.0% |
| ! | ACCAAATTAAACAAATTGCA+TGG | + | chr4.3:87095226-87095245 | None:intergenic | 25.0% |
| ! | ACCAAATTAAACAAATTGCT+TGG | + | chr4.3:87095276-87095295 | None:intergenic | 25.0% |
| ! | ACTATACCATTCTTAGAAAA+AGG | + | chr4.3:87092484-87092503 | None:intergenic | 25.0% |
| ! | ATAAGGTTTACGCAAATTAA+AGG | + | chr4.3:87095024-87095043 | None:intergenic | 25.0% |
| ! | ATATTGATAGGATCATTGAT+TGG | - | chr4.3:87091035-87091054 | MS.gene38302:intron | 25.0% |
| ! | CAGCTTATACATATACAATT+AGG | + | chr4.3:87093763-87093782 | None:intergenic | 25.0% |
| ! | CCAAATTAAACAAATTGCAT+GGG | + | chr4.3:87095225-87095244 | None:intergenic | 25.0% |
| ! | CCAAATTAAACAAATTGCTT+GGG | + | chr4.3:87095275-87095294 | None:intergenic | 25.0% |
| ! | GAAAGTTTGTAGGAATAATA+AGG | - | chr4.3:87091096-87091115 | MS.gene38302:intron | 25.0% |
| ! | TACTTTAGATTCATGATTCA+TGG | - | chr4.3:87093417-87093436 | MS.gene38302:intron | 25.0% |
| ! | TATAAGCTGTAAGAATTTCT+AGG | - | chr4.3:87093774-87093793 | MS.gene38302:CDS | 25.0% |
| ! | TCATATTGAACTATTGAAGT+TGG | - | chr4.3:87093576-87093595 | MS.gene38302:CDS | 25.0% |
| ! | TCATGAGAATCATTATCAAT+TGG | + | chr4.3:87092234-87092253 | None:intergenic | 25.0% |
| ! | TGACATTCATATTGATATCA+TGG | - | chr4.3:87093171-87093190 | MS.gene38302:intron | 25.0% |
| ! | TGTAATAACTACATGAATGA+TGG | - | chr4.3:87094456-87094475 | MS.gene38302:CDS | 25.0% |
| ! | TTCCTTCTAATATCATGATT+AGG | + | chr4.3:87091391-87091410 | None:intergenic | 25.0% |
| !! | AATATAACTTTAAGAGCACA+GGG | + | chr4.3:87093468-87093487 | None:intergenic | 25.0% |
| !! | ATCATCTTACAATTTTACCA+AGG | + | chr4.3:87093696-87093715 | None:intergenic | 25.0% |
| !! | TATTGATAGGATCATTGATT+GGG | - | chr4.3:87091036-87091055 | MS.gene38302:intron | 25.0% |
| !! | TGTTGAGAAATTTCTTGTTT+CGG | - | chr4.3:87090928-87090947 | MS.gene38302:CDS | 25.0% |
| !!! | CTCTAATTTTTTTTGCATGA+AGG | - | chr4.3:87094518-87094537 | MS.gene38302:CDS | 25.0% |
| !!! | TATTTGTAGACTTGATAATG+TGG | + | chr4.3:87094975-87094994 | None:intergenic | 25.0% |
| AAAATCATGCTTCTAGATGA+TGG | + | chr4.3:87094821-87094840 | None:intergenic | 30.0% | |
| AAACTTCATGTGAACTCATT+AGG | + | chr4.3:87094489-87094508 | None:intergenic | 30.0% | |
| AACTCTCCAGAATTTATGTT+TGG | - | chr4.3:87092964-87092983 | MS.gene38302:CDS | 30.0% | |
| AACTTCATGTGAACTCATTA+GGG | + | chr4.3:87094488-87094507 | None:intergenic | 30.0% | |
| AAGAGACGATAACAATAATG+AGG | - | chr4.3:87093914-87093933 | MS.gene38302:CDS | 30.0% | |
| AATGTATGTAGTTGTAGTAC+AGG | - | chr4.3:87094779-87094798 | MS.gene38302:CDS | 30.0% | |
| ACAACCTGATCAATATTCTT+CGG | + | chr4.3:87091445-87091464 | None:intergenic | 30.0% | |
| ACTGAAACTGGAGTTATATT+CGG | - | chr4.3:87093091-87093110 | MS.gene38302:CDS | 30.0% | |
| ACTGTTTCAATGACTCAATT+TGG | - | chr4.3:87094567-87094586 | MS.gene38302:CDS | 30.0% | |
| AGAAATTTCTCAACAATCTC+AGG | + | chr4.3:87090923-87090942 | None:intergenic | 30.0% | |
| AGAATAAGAAGTAAAACCCA+GGG | - | chr4.3:87095443-87095462 | MS.gene38302:CDS | 30.0% | |
| ATACAATTAGGCTACTACTA+GGG | + | chr4.3:87093751-87093770 | None:intergenic | 30.0% | |
| ATATAACAAATGAGAGAAGG+AGG | + | chr4.3:87093283-87093302 | None:intergenic | 30.0% | |
| ATTAGATTGCTGTGTAATAC+TGG | - | chr4.3:87092270-87092289 | MS.gene38302:intron | 30.0% | |
| CATGCAAAACAAAAACTTCA+AGG | + | chr4.3:87092529-87092548 | None:intergenic | 30.0% | |
| CATTATTGTTATCGTCTCTT+AGG | + | chr4.3:87093914-87093933 | None:intergenic | 30.0% | |
| CTAACTCCAAACATAAATTC+TGG | + | chr4.3:87092973-87092992 | None:intergenic | 30.0% | |
| CTCAAAAGTTGAAGTTAACA+AGG | - | chr4.3:87092140-87092159 | MS.gene38302:intron | 30.0% | |
| CTCCTAATCATGATATTAGA+AGG | - | chr4.3:87091386-87091405 | MS.gene38302:intron | 30.0% | |
| GAATCATTATCAATTGGATG+TGG | + | chr4.3:87092228-87092247 | None:intergenic | 30.0% | |
| GAGTAAACAGATTATAGCTA+AGG | + | chr4.3:87094732-87094751 | None:intergenic | 30.0% | |
| GATAAAATCGAAGGAATCAA+CGG | + | chr4.3:87090800-87090819 | None:intergenic | 30.0% | |
| TATACAATTAGGCTACTACT+AGG | + | chr4.3:87093752-87093771 | None:intergenic | 30.0% | |
| TCATGGTAATCTCTATTACT+GGG | - | chr4.3:87093434-87093453 | MS.gene38302:intron | 30.0% | |
| TGGATACTTTCTATCAGATT+CGG | - | chr4.3:87091719-87091738 | MS.gene38302:intron | 30.0% | |
| TTCATGGTAATCTCTATTAC+TGG | - | chr4.3:87093433-87093452 | MS.gene38302:intron | 30.0% | |
| TTGCATGAAAAACAACTTCT+AGG | - | chr4.3:87093394-87093413 | MS.gene38302:intron | 30.0% | |
| ! | AAGTTTAGTGTTTTGTCAGT+TGG | - | chr4.3:87092635-87092654 | MS.gene38302:intron | 30.0% |
| ! | AGCTGTGATTCATTCATTTT+TGG | + | chr4.3:87094660-87094679 | None:intergenic | 30.0% |
| ! | AGTTTAGTGTTTTGTCAGTT+GGG | - | chr4.3:87092636-87092655 | MS.gene38302:intron | 30.0% |
| ! | ATATAACTTTAAGAGCACAG+GGG | + | chr4.3:87093467-87093486 | None:intergenic | 30.0% |
| ! | ATCTTACAATTTTACCAAGG+TGG | + | chr4.3:87093693-87093712 | None:intergenic | 30.0% |
| ! | ATTGATAGGATCATTGATTG+GGG | - | chr4.3:87091037-87091056 | MS.gene38302:intron | 30.0% |
| ! | CAATATAACTTTAAGAGCAC+AGG | + | chr4.3:87093469-87093488 | None:intergenic | 30.0% |
| ! | CCCAAGCAATTTGTTTAATT+TGG | - | chr4.3:87095272-87095291 | MS.gene38302:CDS | 30.0% |
| ! | CCCATGCAATTTGTTTAATT+TGG | - | chr4.3:87095222-87095241 | MS.gene38302:CDS | 30.0% |
| ! | CTTCGATGATGGTATATTAA+TGG | - | chr4.3:87093528-87093547 | MS.gene38302:CDS | 30.0% |
| ! | CTTGTTAACTTCAACTTTTG+AGG | + | chr4.3:87092142-87092161 | None:intergenic | 30.0% |
| ! | GATGATGGTATATTAATGGT+TGG | - | chr4.3:87093532-87093551 | MS.gene38302:CDS | 30.0% |
| ! | GATTATGGTTGATATGGTTA+TGG | - | chr4.3:87091342-87091361 | MS.gene38302:intron | 30.0% |
| ! | TACTTGTGCTATTAAGTTTC+CGG | - | chr4.3:87091555-87091574 | MS.gene38302:intron | 30.0% |
| ! | TGAGTATTGTTTGTCTCTTT+CGG | - | chr4.3:87091780-87091799 | MS.gene38302:intron | 30.0% |
| ! | TGATAATGATTCTCATGACA+GGG | - | chr4.3:87092236-87092255 | MS.gene38302:intron | 30.0% |
| ! | TTCGAGAGATTCTTTGATTT+CGG | + | chr4.3:87090468-87090487 | None:intergenic | 30.0% |
| ! | TTTATACACTGATGCTTTTC+TGG | - | chr4.3:87094195-87094214 | MS.gene38302:CDS | 30.0% |
| !! | AAAATCACTTTGAAGCAGAA+GGG | - | chr4.3:87095488-87095507 | MS.gene38302:CDS | 30.0% |
| !! | CATTTGTTGATGGATTTCTT+GGG | - | chr4.3:87091598-87091617 | MS.gene38302:intron | 30.0% |
| !! | TAAAATCACTTTGAAGCAGA+AGG | - | chr4.3:87095487-87095506 | MS.gene38302:CDS | 30.0% |
| !! | TACGAAGATTTTGACAGATT+AGG | + | chr4.3:87090694-87090713 | None:intergenic | 30.0% |
| !! | TTGATAATGATTCTCATGAC+AGG | - | chr4.3:87092235-87092254 | MS.gene38302:intron | 30.0% |
| !! | TTTGCTCCTTTTTCTAAGAA+TGG | - | chr4.3:87092475-87092494 | MS.gene38302:intron | 30.0% |
| !!! | AGATTCAGCATGTTACTTTT+TGG | + | chr4.3:87093825-87093844 | None:intergenic | 30.0% |
| !!! | GATTCAGCATGTTACTTTTT+GGG | + | chr4.3:87093824-87093843 | None:intergenic | 30.0% |
| !!! | TGTATGCAAAGAGTGTTTTT+GGG | - | chr4.3:87095357-87095376 | MS.gene38302:CDS | 30.0% |
| AATTCTGGTAGTAGATAGTC+AGG | + | chr4.3:87095069-87095088 | None:intergenic | 35.0% | |
| ACGCAAATTAAAGGAACTCA+CGG | + | chr4.3:87095015-87095034 | None:intergenic | 35.0% | |
| ACGCAACAATAACAGTCATA+AGG | + | chr4.3:87095041-87095060 | None:intergenic | 35.0% | |
| AGAATCAAGCAAACAGATCA+AGG | - | chr4.3:87093048-87093067 | MS.gene38302:CDS | 35.0% | |
| AGCACATTCATAAACAACAG+CGG | + | chr4.3:87091176-87091195 | None:intergenic | 35.0% | |
| AGGAATAATAAGGGAGAGAA+AGG | - | chr4.3:87091106-87091125 | MS.gene38302:intron | 35.0% | |
| ATAACCGCTCAATTTACCAT+CGG | + | chr4.3:87095420-87095439 | None:intergenic | 35.0% | |
| ATATGGTTATGGATGTCCTT+AGG | - | chr4.3:87091353-87091372 | MS.gene38302:intron | 35.0% | |
| ATGAATCCCACAATCAGTTA+TGG | + | chr4.3:87095154-87095173 | None:intergenic | 35.0% | |
| ATGTAGTTGTAGTACAGGTA+TGG | - | chr4.3:87094784-87094803 | MS.gene38302:CDS | 35.0% | |
| CACTGACAAAGCTTATCTTA+AGG | - | chr4.3:87092100-87092119 | MS.gene38302:intron | 35.0% | |
| CAGAATAAGAAGTAAAACCC+AGG | - | chr4.3:87095442-87095461 | MS.gene38302:CDS | 35.0% | |
| CTGTTTATAAGCTTCCTCAA+GGG | - | chr4.3:87090876-87090895 | MS.gene38302:intron | 35.0% | |
| CTTGAGATCTCTGATTCTTT+CGG | - | chr4.3:87092044-87092063 | MS.gene38302:intron | 35.0% | |
| GAAATCAAAGAATCTCTCGA+AGG | - | chr4.3:87090467-87090486 | MS.gene38302:CDS | 35.0% | |
| GAATATAACTCCAGTTTCAG+TGG | + | chr4.3:87093092-87093111 | None:intergenic | 35.0% | |
| GACAAAGCTTATCTTAAGGT+TGG | - | chr4.3:87092104-87092123 | MS.gene38302:intron | 35.0% | |
| GACAGATTAGGATCATTTCA+GGG | + | chr4.3:87090682-87090701 | None:intergenic | 35.0% | |
| GAGTGATATGCTGATAGATA+TGG | - | chr4.3:87094155-87094174 | MS.gene38302:CDS | 35.0% | |
| GCATGAAGGAAGCTATAAAT+AGG | - | chr4.3:87094532-87094551 | MS.gene38302:CDS | 35.0% | |
| GGAATAATAAGGGAGAGAAA+GGG | - | chr4.3:87091107-87091126 | MS.gene38302:intron | 35.0% | |
| GGATACTTTCTATCAGATTC+GGG | - | chr4.3:87091720-87091739 | MS.gene38302:intron | 35.0% | |
| GGATCGAAATAAGCAGTAAA+AGG | + | chr4.3:87093347-87093366 | None:intergenic | 35.0% | |
| GGTTGTTATGATGCTTAAGA+AGG | - | chr4.3:87091459-87091478 | MS.gene38302:intron | 35.0% | |
| GTCATAGGTTGCTGTAAATA+CGG | - | chr4.3:87094921-87094940 | MS.gene38302:CDS | 35.0% | |
| GTGATGAGATAAGGAAGATA+TGG | - | chr4.3:87092292-87092311 | MS.gene38302:intron | 35.0% | |
| TAAGTGTACTGAGCACATAA+CGG | + | chr4.3:87092689-87092708 | None:intergenic | 35.0% | |
| TACAATTAGGCTACTACTAG+GGG | + | chr4.3:87093750-87093769 | None:intergenic | 35.0% | |
| TACACAGCAATCTAATGCAA+AGG | + | chr4.3:87092266-87092285 | None:intergenic | 35.0% | |
| TACACCGAAGAATATTGATC+AGG | - | chr4.3:87091438-87091457 | MS.gene38302:intron | 35.0% | |
| TACCACAACTCGACAAATAT+AGG | + | chr4.3:87092595-87092614 | None:intergenic | 35.0% | |
| TATGGTTATGGATGTCCTTA+GGG | - | chr4.3:87091354-87091373 | MS.gene38302:intron | 35.0% | |
| TCAAGTGATAAAAGTCGATG+AGG | + | chr4.3:87092425-87092444 | None:intergenic | 35.0% | |
| TCCAGATTCGATAAAATCGA+AGG | + | chr4.3:87090809-87090828 | None:intergenic | 35.0% | |
| TCTGTTTATAAGCTTCCTCA+AGG | - | chr4.3:87090875-87090894 | MS.gene38302:intron | 35.0% | |
| TGAAGCTTATTGTGCTTGAT+CGG | - | chr4.3:87091290-87091309 | MS.gene38302:intron | 35.0% | |
| TGAATCCCACAATCAGTTAT+GGG | + | chr4.3:87095153-87095172 | None:intergenic | 35.0% | |
| TGACAGATTAGGATCATTTC+AGG | + | chr4.3:87090683-87090702 | None:intergenic | 35.0% | |
| TGCAATATATGCTTCGATGA+TGG | - | chr4.3:87093517-87093536 | MS.gene38302:CDS | 35.0% | |
| TGTTATGATGCTTAAGAAGG+AGG | - | chr4.3:87091462-87091481 | MS.gene38302:intron | 35.0% | |
| TGTTTATAAGCTTCCTCAAG+GGG | - | chr4.3:87090877-87090896 | MS.gene38302:intron | 35.0% | |
| TGTTTGCATTTCACTGAGTT+AGG | - | chr4.3:87094009-87094028 | MS.gene38302:CDS | 35.0% | |
| TTATCACTTGAAGAGCAGAA+AGG | - | chr4.3:87092434-87092453 | MS.gene38302:intron | 35.0% | |
| TTATGGGCACTTCATTGTTT+AGG | + | chr4.3:87095137-87095156 | None:intergenic | 35.0% | |
| TTGAGATCTCTGATTCTTTC+GGG | - | chr4.3:87092045-87092064 | MS.gene38302:intron | 35.0% | |
| TTGATCTGTTTGCTTGATTC+TGG | + | chr4.3:87093049-87093068 | None:intergenic | 35.0% | |
| TTGATGTTACTGTCATCAAC+CGG | - | chr4.3:87092933-87092952 | MS.gene38302:CDS | 35.0% | |
| ! | AAGAAGGAGGAGTTTTTGAA+CGG | + | chr4.3:87090615-87090634 | None:intergenic | 35.0% |
| ! | ACAGTTACAAATGGTGGTTT+TGG | - | chr4.3:87091063-87091082 | MS.gene38302:intron | 35.0% |
| ! | ATGTTTGGAGTTAGCAACTA+TGG | - | chr4.3:87092979-87092998 | MS.gene38302:CDS | 35.0% |
| ! | CAATCTGTCTATGCTTTTCA+GGG | - | chr4.3:87092734-87092753 | MS.gene38302:CDS | 35.0% |
| ! | GTAATACTGGTGATGAGATA+AGG | - | chr4.3:87092283-87092302 | MS.gene38302:intron | 35.0% |
| ! | GTTTAGTGTTTTGTCAGTTG+GGG | - | chr4.3:87092637-87092656 | MS.gene38302:intron | 35.0% |
| ! | TAAATTCTGGAGAGTTTCCT+TGG | + | chr4.3:87092960-87092979 | None:intergenic | 35.0% |
| ! | TACCTATATTTGTCGAGTTG+TGG | - | chr4.3:87092590-87092609 | MS.gene38302:intron | 35.0% |
| ! | TACTGTTGTGCATTTGTTGA+TGG | - | chr4.3:87091588-87091607 | MS.gene38302:intron | 35.0% |
| ! | TAGGGAGATTATGGTTGATA+TGG | - | chr4.3:87091336-87091355 | MS.gene38302:intron | 35.0% |
| ! | TATAACTTTAAGAGCACAGG+GGG | + | chr4.3:87093466-87093485 | None:intergenic | 35.0% |
| ! | TCAATCTGTCTATGCTTTTC+AGG | - | chr4.3:87092733-87092752 | MS.gene38302:CDS | 35.0% |
| ! | TCCTTCGATTTTATCGAATC+TGG | - | chr4.3:87090805-87090824 | MS.gene38302:intron | 35.0% |
| ! | TGTTTGGAGTTAGCAACTAT+GGG | - | chr4.3:87092980-87092999 | MS.gene38302:CDS | 35.0% |
| ! | TTCTATCATCACTAGGCTTT+TGG | - | chr4.3:87091699-87091718 | MS.gene38302:intron | 35.0% |
| ! | TTGATAGGATCATTGATTGG+GGG | - | chr4.3:87091038-87091057 | MS.gene38302:intron | 35.0% |
| ! | TTGCTGTGCTTGATTTGATT+TGG | - | chr4.3:87095197-87095216 | MS.gene38302:CDS | 35.0% |
| ! | TTTAGTGTTTTGTCAGTTGG+GGG | - | chr4.3:87092638-87092657 | MS.gene38302:intron | 35.0% |
| !! | CTAGAAGCATGATTTTGACA+GGG | - | chr4.3:87094825-87094844 | MS.gene38302:CDS | 35.0% |
| !! | GCATTTGTTGATGGATTTCT+TGG | - | chr4.3:87091597-87091616 | MS.gene38302:intron | 35.0% |
| !! | TCTAGAAGCATGATTTTGAC+AGG | - | chr4.3:87094824-87094843 | MS.gene38302:CDS | 35.0% |
| !!! | CTGTATGCAAAGAGTGTTTT+TGG | - | chr4.3:87095356-87095375 | MS.gene38302:CDS | 35.0% |
| !!! | GTATGCAAAGAGTGTTTTTG+GGG | - | chr4.3:87095358-87095377 | MS.gene38302:CDS | 35.0% |
| AAATAGAGACGTAGAGGAGT+AGG | + | chr4.3:87093959-87093978 | None:intergenic | 40.0% | |
| AAGGTTTCTTCCACTGAAAC+TGG | - | chr4.3:87093079-87093098 | MS.gene38302:CDS | 40.0% | |
| AAGTGCCCATAACTGATTGT+GGG | - | chr4.3:87095145-87095164 | MS.gene38302:CDS | 40.0% | |
| ACACCGCGAATAAATTCGTT+CGG | + | chr4.3:87090731-87090750 | None:intergenic | 40.0% | |
| ACATATGCTTCAGCATAGAC+AGG | + | chr4.3:87092887-87092906 | None:intergenic | 40.0% | |
| ACGAGCTTAAGAGGGATAAT+AGG | - | chr4.3:87091317-87091336 | MS.gene38302:intron | 40.0% | |
| ACTCCTCTACGTCTCTATTT+GGG | - | chr4.3:87093959-87093978 | MS.gene38302:CDS | 40.0% | |
| AGGGATCTCTGTCTTCTATT+GGG | - | chr4.3:87092019-87092038 | MS.gene38302:intron | 40.0% | |
| AGTGGAAGAAACCTTGATGT+TGG | + | chr4.3:87093074-87093093 | None:intergenic | 40.0% | |
| ATACGGTATTGCAAGATGAG+AGG | - | chr4.3:87094938-87094957 | MS.gene38302:CDS | 40.0% | |
| ATAGGGAACACACAACACAA+AGG | + | chr4.3:87093878-87093897 | None:intergenic | 40.0% | |
| ATCCTCAGAGATGGTGTAAA+AGG | + | chr4.3:87091854-87091873 | None:intergenic | 40.0% | |
| ATCCTTTGTAAACTCTCCAG+TGG | + | chr4.3:87092810-87092829 | None:intergenic | 40.0% | |
| ATGATAGAAACACGCAGCTT+AGG | + | chr4.3:87091688-87091707 | None:intergenic | 40.0% | |
| ATGCCTGTAGCTATTCAAAG+TGG | + | chr4.3:87094114-87094133 | None:intergenic | 40.0% | |
| ATTGCAAACAGAACGATGTC+AGG | + | chr4.3:87093503-87093522 | None:intergenic | 40.0% | |
| CAAATTAAAGGAACTCACGG+TGG | + | chr4.3:87095012-87095031 | None:intergenic | 40.0% | |
| CAATCCGATGGTAAATTGAG+CGG | - | chr4.3:87095413-87095432 | MS.gene38302:CDS | 40.0% | |
| CAATTTGGTCCTGTCTTGAT+GGG | - | chr4.3:87094582-87094601 | MS.gene38302:CDS | 40.0% | |
| CAGCATATCACTCATACTGT+GGG | + | chr4.3:87094148-87094167 | None:intergenic | 40.0% | |
| CATTGAGACCATGATCAACA+AGG | + | chr4.3:87092178-87092197 | None:intergenic | 40.0% | |
| CGAGCTTAAGAGGGATAATA+GGG | - | chr4.3:87091318-87091337 | MS.gene38302:intron | 40.0% | |
| GAAGGAAGCTATAAATAGGC+AGG | - | chr4.3:87094536-87094555 | MS.gene38302:CDS | 40.0% | |
| GAGGGATAATAGGGAGATTA+TGG | - | chr4.3:87091327-87091346 | MS.gene38302:intron | 40.0% | |
| GCAACTATTAAGCAGTGTCT+TGG | - | chr4.3:87091820-87091839 | MS.gene38302:intron | 40.0% | |
| GCAATCATGCTTCTCCTTAA+CGG | - | chr4.3:87090527-87090546 | MS.gene38302:CDS | 40.0% | |
| GCTTATCTTAAGGTTGGAAG+AGG | - | chr4.3:87092110-87092129 | MS.gene38302:intron | 40.0% | |
| GTATTGTTTGTCTCTTTCGG+AGG | - | chr4.3:87091783-87091802 | MS.gene38302:intron | 40.0% | |
| TAAAAACGCGTTCCTCTTAC+TGG | + | chr4.3:87090966-87090985 | None:intergenic | 40.0% | |
| TAAAAGTCGATGAGGTCATC+AGG | + | chr4.3:87092417-87092436 | None:intergenic | 40.0% | |
| TACAAATGTTGCGTCTGCTA+TGG | - | chr4.3:87091624-87091643 | MS.gene38302:intron | 40.0% | |
| TACGGTATTGCAAGATGAGA+GGG | - | chr4.3:87094939-87094958 | MS.gene38302:CDS | 40.0% | |
| TACTCCTCTACGTCTCTATT+TGG | - | chr4.3:87093958-87093977 | MS.gene38302:CDS | 40.0% | |
| TACTGCTTATTTCGATCCCT+GGG | - | chr4.3:87093349-87093368 | MS.gene38302:intron | 40.0% | |
| TCAATTTGGTCCTGTCTTGA+TGG | - | chr4.3:87094581-87094600 | MS.gene38302:CDS | 40.0% | |
| TCACCGAACGAATTTATTCG+CGG | - | chr4.3:87090725-87090744 | MS.gene38302:intron | 40.0% | |
| TCAGCATATCACTCATACTG+TGG | + | chr4.3:87094149-87094168 | None:intergenic | 40.0% | |
| TCCTCAGAGATGGTGTAAAA+GGG | + | chr4.3:87091853-87091872 | None:intergenic | 40.0% | |
| TGAGATAAGGAAGATATGGC+TGG | - | chr4.3:87092296-87092315 | MS.gene38302:intron | 40.0% | |
| TGAGTTTGAGTGGGAAAACA+AGG | - | chr4.3:87093246-87093265 | MS.gene38302:intron | 40.0% | |
| TGATAGAAACACGCAGCTTA+GGG | + | chr4.3:87091687-87091706 | None:intergenic | 40.0% | |
| TGATTTCGAGGTAAAGAAGG+AGG | + | chr4.3:87090628-87090647 | None:intergenic | 40.0% | |
| TGCCTGTAGCTATTCAAAGT+GGG | + | chr4.3:87094113-87094132 | None:intergenic | 40.0% | |
| TGCCTTTGCTTTAATCTCCT+CGG | + | chr4.3:87092376-87092395 | None:intergenic | 40.0% | |
| TTACTGCTTATTTCGATCCC+TGG | - | chr4.3:87093348-87093367 | MS.gene38302:intron | 40.0% | |
| TTCACAGTCCTTGTTGATCA+TGG | - | chr4.3:87092167-87092186 | MS.gene38302:intron | 40.0% | |
| ! | ATGAGAAGAATGGGGAGTAT+AGG | - | chr4.3:87091509-87091528 | MS.gene38302:intron | 40.0% |
| ! | CTTCTAGATGATGGCCAATT+TGG | + | chr4.3:87094812-87094831 | None:intergenic | 40.0% |
| ! | GATTCTGAGAAAGCTACAGA+TGG | + | chr4.3:87094620-87094639 | None:intergenic | 40.0% |
| ! | GCTGTTGTTTATGAATGTGC+TGG | - | chr4.3:87091175-87091194 | MS.gene38302:intron | 40.0% |
| ! | TCTTGTGCTCTGTGGATTAT+TGG | - | chr4.3:87091757-87091776 | MS.gene38302:intron | 40.0% |
| ! | TGAAGAGCAGAAAGGTATGA+TGG | - | chr4.3:87092442-87092461 | MS.gene38302:intron | 40.0% |
| ! | TGATAGGATCATTGATTGGG+GGG | - | chr4.3:87091039-87091058 | MS.gene38302:intron | 40.0% |
| ! | TGCGTGTTTCTATCATCACT+AGG | - | chr4.3:87091692-87091711 | MS.gene38302:intron | 40.0% |
| ! | TTGTGCTATTAAGTTTCCGG+AGG | - | chr4.3:87091558-87091577 | MS.gene38302:intron | 40.0% |
| ! | TTTCGGGTGATTTCTTCCTT+GGG | - | chr4.3:87092061-87092080 | MS.gene38302:intron | 40.0% |
| !! | ATGTGGCCTTTAGAACTATG+TGG | - | chr4.3:87093221-87093240 | MS.gene38302:intron | 40.0% |
| !! | GGTTGATGACAGTAACATCA+AGG | + | chr4.3:87092934-87092953 | None:intergenic | 40.0% |
| !! | TGTGGCCTTTAGAACTATGT+GGG | - | chr4.3:87093222-87093241 | MS.gene38302:intron | 40.0% |
| !! | TTTTACACCATCTCTGAGGA+TGG | - | chr4.3:87091853-87091872 | MS.gene38302:intron | 40.0% |
| !!! | TACTTTTTGGGTGCAATGAC+AGG | + | chr4.3:87093812-87093831 | None:intergenic | 40.0% |
| AAAATGGAAAAATGGGGCCC+AGG | + | chr4.3:87093369-87093388 | None:intergenic | 45.0% | |
| AAATGGAAAAATGGGGCCCA+GGG | + | chr4.3:87093368-87093387 | None:intergenic | 45.0% | |
| AAGACTCAGAGCAATTCCCT+GGG | + | chr4.3:87095462-87095481 | None:intergenic | 45.0% | |
| AATCGCATTCTTCAGCTCAC+TGG | - | chr4.3:87092851-87092870 | MS.gene38302:CDS | 45.0% | |
| AATGTGTGATGCTGCTGTCT+GGG | - | chr4.3:87094081-87094100 | MS.gene38302:CDS | 45.0% | |
| ACAAATGAGAGAAGGAGGAG+AGG | + | chr4.3:87093278-87093297 | None:intergenic | 45.0% | |
| ACACCCAAATAGAGACGTAG+AGG | + | chr4.3:87093965-87093984 | None:intergenic | 45.0% | |
| ACAGATCAAGGCCAACATCA+AGG | - | chr4.3:87093060-87093079 | MS.gene38302:CDS | 45.0% | |
| AGCAAGATGCTTCCAGTAAG+AGG | - | chr4.3:87090951-87090970 | MS.gene38302:CDS | 45.0% | |
| ATCGCATTCTTCAGCTCACT+GGG | - | chr4.3:87092852-87092871 | MS.gene38302:CDS | 45.0% | |
| ATGACGGTGATGAAGAGTTG+AGG | + | chr4.3:87090563-87090582 | None:intergenic | 45.0% | |
| CAGGGATCTCTGTCTTCTAT+TGG | - | chr4.3:87092018-87092037 | MS.gene38302:intron | 45.0% | |
| CGGTGATTTCGAGGTAAAGA+AGG | + | chr4.3:87090631-87090650 | None:intergenic | 45.0% | |
| CGTCTCTATTTGGGTGTGAA+AGG | - | chr4.3:87093968-87093987 | MS.gene38302:CDS | 45.0% | |
| CTATTTGGGTGTGAAAGGAG+AGG | - | chr4.3:87093973-87093992 | MS.gene38302:CDS | 45.0% | |
| CTCATCGTTCACTTCGACAA+AGG | - | chr4.3:87090425-87090444 | MS.gene38302:CDS | 45.0% | |
| CTTTAATCTCCTCGGTCTCA+CGG | + | chr4.3:87092368-87092387 | None:intergenic | 45.0% | |
| CTTTGTCGAAGTGAACGATG+AGG | + | chr4.3:87090427-87090446 | None:intergenic | 45.0% | |
| GACCGAGGAGATTAAAGCAA+AGG | - | chr4.3:87092371-87092390 | MS.gene38302:intron | 45.0% | |
| GAGAACTTTACCGCGAGAAT+CGG | + | chr4.3:87090660-87090679 | None:intergenic | 45.0% | |
| GCTCAGTACACTTACTCATC+TGG | - | chr4.3:87092695-87092714 | MS.gene38302:CDS | 45.0% | |
| GGTGATGAAGAGTTGAGGAA+TGG | + | chr4.3:87090558-87090577 | None:intergenic | 45.0% | |
| GTGAAAGGAGAGGTAGATCT+CGG | - | chr4.3:87093983-87094002 | MS.gene38302:CDS | 45.0% | |
| TAATGTGTGATGCTGCTGTC+TGG | - | chr4.3:87094080-87094099 | MS.gene38302:CDS | 45.0% | |
| TCGGCTTAACGAGCTTAAGA+GGG | - | chr4.3:87091309-87091328 | MS.gene38302:intron | 45.0% | |
| TCTCTTGTTCAGCTCTGCAT+TGG | - | chr4.3:87095304-87095323 | MS.gene38302:CDS | 45.0% | |
| TGCCACTGGAGAGTTTACAA+AGG | - | chr4.3:87092805-87092824 | MS.gene38302:CDS | 45.0% | |
| TGCCCACTTTGAATAGCTAC+AGG | - | chr4.3:87094108-87094127 | MS.gene38302:CDS | 45.0% | |
| TGCTATTAAGTTTCCGGAGG+TGG | - | chr4.3:87091561-87091580 | MS.gene38302:intron | 45.0% | |
| TTATAGCTAAGGCCCTAAGC+AGG | + | chr4.3:87094721-87094740 | None:intergenic | 45.0% | |
| TTCGGGTGATTTCTTCCTTG+GGG | - | chr4.3:87092062-87092081 | MS.gene38302:intron | 45.0% | |
| TTGGGGGGAACAGTTACAAA+TGG | - | chr4.3:87091054-87091073 | MS.gene38302:intron | 45.0% | |
| TTGTTCAGCTCTGCATTGGA+AGG | - | chr4.3:87095308-87095327 | MS.gene38302:CDS | 45.0% | |
| ! | ACCGATAAAACCGATTCTCG+CGG | - | chr4.3:87090647-87090666 | MS.gene38302:intron | 45.0% |
| ! | AGCATTGAGAAGCAATCCGA+TGG | - | chr4.3:87095401-87095420 | MS.gene38302:CDS | 45.0% |
| ! | AGGGAATTGCTCTGAGTCTT+GGG | - | chr4.3:87095462-87095481 | MS.gene38302:CDS | 45.0% |
| ! | ATCGGCTTAACGAGCTTAAG+AGG | - | chr4.3:87091308-87091327 | MS.gene38302:intron | 45.0% |
| ! | CTTTCGGGTGATTTCTTCCT+TGG | - | chr4.3:87092060-87092079 | MS.gene38302:intron | 45.0% |
| ! | GAAAGTACGCGTACAGAAGT+TGG | + | chr4.3:87093671-87093690 | None:intergenic | 45.0% |
| ! | GAAGTGCCCATAACTGATTG+TGG | - | chr4.3:87095144-87095163 | MS.gene38302:CDS | 45.0% |
| ! | GTACAGGTATGGTGCCAAAT+TGG | - | chr4.3:87094795-87094814 | MS.gene38302:CDS | 45.0% |
| ! | TATGTGGGCTGAGTTTGAGT+GGG | - | chr4.3:87093237-87093256 | MS.gene38302:intron | 45.0% |
| ! | TCCCTTTTACACCATCTCTG+AGG | - | chr4.3:87091849-87091868 | MS.gene38302:intron | 45.0% |
| !! | ACACTGATGCTTTTCTGGCA+AGG | - | chr4.3:87094200-87094219 | MS.gene38302:CDS | 45.0% |
| !! | ACCGCGAGAATCGGTTTTAT+CGG | + | chr4.3:87090651-87090670 | None:intergenic | 45.0% |
| !! | CGGTTTTATCGGTGATTTCG+AGG | + | chr4.3:87090640-87090659 | None:intergenic | 45.0% |
| !! | CTCAGCCCACATAGTTCTAA+AGG | + | chr4.3:87093230-87093249 | None:intergenic | 45.0% |
| !! | TAGACTTGATAATGTGGCCC+AGG | + | chr4.3:87094969-87094988 | None:intergenic | 45.0% |
| !! | TGGATGTGGTTGTTTTCGTG+CGG | - | chr4.3:87091644-87091663 | MS.gene38302:intron | 45.0% |
| !!! | TGTTTTTGGGGAAGATGCTC+TGG | - | chr4.3:87095370-87095389 | MS.gene38302:CDS | 45.0% |
| AAAGGAGAGGTAGATCTCGG+TGG | - | chr4.3:87093986-87094005 | MS.gene38302:CDS | 50.0% | |
| AAGACAGAGATCCCTGCACA+AGG | + | chr4.3:87092014-87092033 | None:intergenic | 50.0% | |
| ACAGCATTTCGCCTCACGAA+AGG | + | chr4.3:87090842-87090861 | None:intergenic | 50.0% | |
| ACTCGACCACTGTGTCTTCT+AGG | - | chr4.3:87091914-87091933 | MS.gene38302:intron | 50.0% | |
| AGACAGAGATCCCTGCACAA+GGG | + | chr4.3:87092013-87092032 | None:intergenic | 50.0% | |
| AGAGGGTCAGGAGACATCAA+AGG | - | chr4.3:87091876-87091895 | MS.gene38302:intron | 50.0% | |
| AGATATGGCTGGAATCCTGC+AGG | - | chr4.3:87092307-87092326 | MS.gene38302:intron | 50.0% | |
| AGCATCGTCATCCTTTCGTG+AGG | - | chr4.3:87090828-87090847 | MS.gene38302:intron | 50.0% | |
| AGGTTGTTAAGACGCAGAGC+GGG | - | chr4.3:87091482-87091501 | MS.gene38302:intron | 50.0% | |
| AGTCTCAAGAGCAGCACTCT+GGG | + | chr4.3:87091974-87091993 | None:intergenic | 50.0% | |
| ATGGTCTCAATGCTGCAGCT+TGG | - | chr4.3:87092186-87092205 | MS.gene38302:intron | 50.0% | |
| CAAGACTCAGAGCAATTCCC+TGG | + | chr4.3:87095463-87095482 | None:intergenic | 50.0% | |
| CAAGATGAGAGGGAGTTCCT+GGG | - | chr4.3:87094949-87094968 | MS.gene38302:CDS | 50.0% | |
| CATCGCAAGTGAGGACGTAA+CGG | + | chr4.3:87090586-87090605 | None:intergenic | 50.0% | |
| CCAACTTGAGCTCGAAGATG+AGG | - | chr4.3:87092763-87092782 | MS.gene38302:CDS | 50.0% | |
| CCTCATCTTCGAGCTCAAGT+TGG | + | chr4.3:87092766-87092785 | None:intergenic | 50.0% | |
| CTATCAGATTCGGGCTGCTA+GGG | - | chr4.3:87091729-87091748 | MS.gene38302:intron | 50.0% | |
| GACGATCTTAAACGTGCCAC+TGG | - | chr4.3:87092791-87092810 | MS.gene38302:CDS | 50.0% | |
| GAGGAATGGTTTCGCCGTTA+AGG | + | chr4.3:87090544-87090563 | None:intergenic | 50.0% | |
| GAGGTTGTTAAGACGCAGAG+CGG | - | chr4.3:87091481-87091500 | MS.gene38302:intron | 50.0% | |
| GCGTCCACAAAACTACACTC+TGG | - | chr4.3:87093021-87093040 | MS.gene38302:CDS | 50.0% | |
| GGGGGAACAGTTACAAATGG+TGG | - | chr4.3:87091057-87091076 | MS.gene38302:intron | 50.0% | |
| GTATAGGCAGATGTTGGTGC+AGG | - | chr4.3:87091525-87091544 | MS.gene38302:intron | 50.0% | |
| TACTGTCATCAACCGGACCA+AGG | - | chr4.3:87092940-87092959 | MS.gene38302:CDS | 50.0% | |
| TCAAGCAACTGTTCCCCTTG+AGG | + | chr4.3:87090893-87090912 | None:intergenic | 50.0% | |
| TCTATCAGATTCGGGCTGCT+AGG | - | chr4.3:87091728-87091747 | MS.gene38302:intron | 50.0% | |
| TCTCTTTCGGAGGTTGAGAG+TGG | - | chr4.3:87091793-87091812 | MS.gene38302:intron | 50.0% | |
| TCTGCATTGGAAGGTGAGTG+TGG | - | chr4.3:87095317-87095336 | MS.gene38302:CDS | 50.0% | |
| TCTGGAGAGTTTCCTTGGTC+CGG | + | chr4.3:87092955-87092974 | None:intergenic | 50.0% | |
| TGTACGCGTACTTTCCACCT+TGG | - | chr4.3:87093676-87093695 | MS.gene38302:CDS | 50.0% | |
| TGTTGCGTCTGCTATGGATG+TGG | - | chr4.3:87091630-87091649 | MS.gene38302:intron | 50.0% | |
| TTGATTTCGGTTGCGAGTGC+TGG | + | chr4.3:87090455-87090474 | None:intergenic | 50.0% | |
| TTTCCCAAGCCCATCAAGAC+AGG | + | chr4.3:87094594-87094613 | None:intergenic | 50.0% | |
| ! | ACCATCTCTGAGGATGGAGA+GGG | - | chr4.3:87091859-87091878 | MS.gene38302:intron | 50.0% |
| ! | ATTCGCAGCCGCTTTAATCG+CGG | + | chr4.3:87091230-87091249 | None:intergenic | 50.0% |
| ! | CAGGGAATTGCTCTGAGTCT+TGG | - | chr4.3:87095461-87095480 | MS.gene38302:CDS | 50.0% |
| ! | CTATGTGGGCTGAGTTTGAG+TGG | - | chr4.3:87093236-87093255 | MS.gene38302:intron | 50.0% |
| ! | GAGCTTTGTGAAGATGCTCG+CGG | - | chr4.3:87092332-87092351 | MS.gene38302:intron | 50.0% |
| ! | GGGAATTGCTCTGAGTCTTG+GGG | - | chr4.3:87095463-87095482 | MS.gene38302:CDS | 50.0% |
| ! | GGGTTTGTTCTTGTGCTCTG+TGG | - | chr4.3:87091749-87091768 | MS.gene38302:intron | 50.0% |
| ! | TCCTGCATCTTGTGCTGATG+TGG | - | chr4.3:87093204-87093223 | MS.gene38302:intron | 50.0% |
| ! | TGGGGAGTATAGGCAGATGT+TGG | - | chr4.3:87091519-87091538 | MS.gene38302:intron | 50.0% |
| !! | AGTGAGGACGTAACGGATGA+CGG | + | chr4.3:87090579-87090598 | None:intergenic | 50.0% |
| !! | GGAGCCAGAGTGTAGTTTTG+TGG | + | chr4.3:87093028-87093047 | None:intergenic | 50.0% |
| !! | GGATGTGGTTGTTTTCGTGC+GGG | - | chr4.3:87091645-87091664 | MS.gene38302:intron | 50.0% |
| !! | TAGGAGTCGAAAGTGCCCTA+AGG | + | chr4.3:87091372-87091391 | None:intergenic | 50.0% |
| AAGGAACTCACGGTGGAGTC+AGG | + | chr4.3:87095005-87095024 | None:intergenic | 55.0% | |
| ACAACAGTACTCGCCACCTC+CGG | + | chr4.3:87091577-87091596 | None:intergenic | 55.0% | |
| ACCCTCTCCATCCTCAGAGA+TGG | + | chr4.3:87091863-87091882 | None:intergenic | 55.0% | |
| AGAGATCCCTGCACAAGGGT+AGG | + | chr4.3:87092009-87092028 | None:intergenic | 55.0% | |
| AGCAGCACTCTGGGTAGCAT+AGG | + | chr4.3:87091965-87091984 | None:intergenic | 55.0% | |
| AGGCCTCCTAGAAGACACAG+TGG | + | chr4.3:87091923-87091942 | None:intergenic | 55.0% | |
| CAGTCTCAAGAGCAGCACTC+TGG | + | chr4.3:87091975-87091994 | None:intergenic | 55.0% | |
| CGACCACTGTGTCTTCTAGG+AGG | - | chr4.3:87091917-87091936 | MS.gene38302:intron | 55.0% | |
| CGGTGTGATCATCGCAAGTG+AGG | + | chr4.3:87090595-87090614 | None:intergenic | 55.0% | |
| CTGGGTAGCATAGGTCCCAT+CGG | + | chr4.3:87091956-87091975 | None:intergenic | 55.0% | |
| CTTCACAAAGCTCTGCCTGC+AGG | + | chr4.3:87092325-87092344 | None:intergenic | 55.0% | |
| GACATCAAAGGCTGTGCAGC+AGG | - | chr4.3:87091888-87091907 | MS.gene38302:intron | 55.0% | |
| GAGGTCATCAGGCTGTGCAT+TGG | + | chr4.3:87092406-87092425 | None:intergenic | 55.0% | |
| GCAAGATGAGAGGGAGTTCC+TGG | - | chr4.3:87094948-87094967 | MS.gene38302:CDS | 55.0% | |
| GCCACATCAGCACAAGATGC+AGG | + | chr4.3:87093208-87093227 | None:intergenic | 55.0% | |
| GGTTGTTAAGACGCAGAGCG+GGG | - | chr4.3:87091483-87091502 | MS.gene38302:intron | 55.0% | |
| TACATGCGACAACTGCCCCA+AGG | + | chr4.3:87092080-87092099 | None:intergenic | 55.0% | |
| TGAGCTCGAAGATGAGGTGC+AGG | - | chr4.3:87092769-87092788 | MS.gene38302:CDS | 55.0% | |
| ! | AGCGGGGAGCATGAGAAGAA+TGG | - | chr4.3:87091499-87091518 | MS.gene38302:intron | 55.0% |
| ! | CACCATCTCTGAGGATGGAG+AGG | - | chr4.3:87091858-87091877 | MS.gene38302:intron | 55.0% |
| ! | CGGGGAGCATGAGAAGAATG+GGG | - | chr4.3:87091501-87091520 | MS.gene38302:intron | 55.0% |
| ! | GCGGGGAGCATGAGAAGAAT+GGG | - | chr4.3:87091500-87091519 | MS.gene38302:intron | 55.0% |
| ! | TGCACCGACCGCGATTAAAG+CGG | - | chr4.3:87091219-87091238 | MS.gene38302:intron | 55.0% |
| !! | GGTCCTGTCTTGATGGGCTT+GGG | - | chr4.3:87094588-87094607 | MS.gene38302:CDS | 55.0% |
| !! | TGGTCCTGTCTTGATGGGCT+TGG | - | chr4.3:87094587-87094606 | MS.gene38302:CDS | 55.0% |
| AGGCCTGCGATTCTTGCCGA+TGG | - | chr4.3:87091937-87091956 | MS.gene38302:intron | 60.0% | |
| CACAAGGGTAGGCGGTGACA+TGG | + | chr4.3:87091998-87092017 | None:intergenic | 60.0% | |
| CGCGGTCGGTGCAGAACTAA+GGG | + | chr4.3:87091212-87091231 | None:intergenic | 60.0% | |
| GATCCCTGCACAAGGGTAGG+CGG | + | chr4.3:87092006-87092025 | None:intergenic | 60.0% | |
| GGCCTGCGATTCTTGCCGAT+GGG | - | chr4.3:87091938-87091957 | MS.gene38302:intron | 60.0% | |
| GTCCCATCGGCAAGAATCGC+AGG | + | chr4.3:87091943-87091962 | None:intergenic | 60.0% | |
| TCACCGCCTACCCTTGTGCA+GGG | - | chr4.3:87092000-87092019 | MS.gene38302:intron | 60.0% | |
| TCGCGGTCGGTGCAGAACTA+AGG | + | chr4.3:87091213-87091232 | None:intergenic | 60.0% | |
| ! | CTCTGAGGATGGAGAGGGTC+AGG | - | chr4.3:87091864-87091883 | MS.gene38302:intron | 60.0% |
| ! | GCAGCCGCTTTAATCGCGGT+CGG | + | chr4.3:87091226-87091245 | None:intergenic | 60.0% |
| GTCACCGCCTACCCTTGTGC+AGG | - | chr4.3:87091999-87092018 | MS.gene38302:intron | 65.0% | |
| TAAGCAGCGCCGTGAGACCG+AGG | - | chr4.3:87092356-87092375 | MS.gene38302:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 87090407 | 87095523 | 87090407 | ID=MS.gene38302 |
| chr4.3 | mRNA | 87090407 | 87095523 | 87090407 | ID=MS.gene38302.t1;Parent=MS.gene38302 |
| chr4.3 | exon | 87093475 | 87095523 | 87093475 | ID=MS.gene38302.t1.exon1;Parent=MS.gene38302.t1 |
| chr4.3 | CDS | 87093475 | 87095523 | 87093475 | ID=cds.MS.gene38302.t1;Parent=MS.gene38302.t1 |
| chr4.3 | exon | 87092663 | 87093175 | 87092663 | ID=MS.gene38302.t1.exon2;Parent=MS.gene38302.t1 |
| chr4.3 | CDS | 87092663 | 87093175 | 87092663 | ID=cds.MS.gene38302.t1;Parent=MS.gene38302.t1 |
| chr4.3 | exon | 87090917 | 87091002 | 87090917 | ID=MS.gene38302.t1.exon3;Parent=MS.gene38302.t1 |
| chr4.3 | CDS | 87090917 | 87091002 | 87090917 | ID=cds.MS.gene38302.t1;Parent=MS.gene38302.t1 |
| chr4.3 | exon | 87090407 | 87090614 | 87090407 | ID=MS.gene38302.t1.exon4;Parent=MS.gene38302.t1 |
| chr4.3 | CDS | 87090407 | 87090614 | 87090407 | ID=cds.MS.gene38302.t1;Parent=MS.gene38302.t1 |
| Gene Sequence |
| Protein sequence |
