AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55836

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55836.t1 MTR_8g099945 99.253 669 5 0 1 669 1 669 0.0 1343
MS.gene55836.t1 MTR_8g099795 96.285 646 23 1 1 646 2 646 0.0 1231
MS.gene55836.t1 MTR_7g099680 64.921 630 214 5 36 661 7 633 0.0 837
MS.gene55836.t1 MTR_4g063720 64.263 638 211 5 36 658 7 642 0.0 831
MS.gene55836.t1 MTR_4g063710 65.961 614 203 4 36 645 7 618 0.0 829
MS.gene55836.t1 MTR_7g024390 65.472 614 206 4 36 645 7 618 0.0 828
MS.gene55836.t1 MTR_7g024580 64.038 634 215 5 36 665 7 631 0.0 827
MS.gene55836.t1 MTR_4g130540 64.423 624 214 5 33 652 3 622 0.0 823
MS.gene55836.t1 MTR_2g017730 54.992 611 249 6 33 633 3 597 0.0 667
MS.gene55836.t1 MTR_6g033760 54.125 606 271 5 39 640 10 612 0.0 662
MS.gene55836.t1 MTR_6g033850 53.542 607 275 5 39 641 10 613 0.0 652
MS.gene55836.t1 MTR_7g026030 54.125 606 267 8 36 635 7 607 0.0 647
MS.gene55836.t1 MTR_7g021440 54.486 613 269 7 36 642 7 615 0.0 640
MS.gene55836.t1 MTR_2g038260 55.628 613 259 9 36 640 7 614 0.0 639
MS.gene55836.t1 MTR_7g451380 53.268 612 276 7 36 640 7 615 0.0 636
MS.gene55836.t1 MTR_7g025820 54.223 592 261 7 36 621 7 594 0.0 632
MS.gene55836.t1 MTR_5g066800 52.006 623 278 8 36 641 7 625 0.0 630
MS.gene55836.t1 MTR_2g032550 53.431 612 275 7 36 640 8 616 0.0 630
MS.gene55836.t1 MTR_7g025720 52.805 606 275 8 36 635 7 607 0.0 624
MS.gene55836.t1 MTR_6g033955 51.535 619 288 6 39 648 10 625 0.0 622
MS.gene55836.t1 MTR_7g025790 52.815 604 274 8 36 633 7 605 0.0 622
MS.gene55836.t1 MTR_6g033820 50.889 619 292 6 39 648 10 625 0.0 621
MS.gene55836.t1 MTR_7g025760 51.320 606 285 7 36 635 7 608 0.0 619
MS.gene55836.t1 MTR_7g025620 52.554 607 275 9 36 635 7 607 0.0 619
MS.gene55836.t1 MTR_7g026170 53.659 615 270 11 36 641 7 615 0.0 618
MS.gene55836.t1 MTR_6g033870 51.774 620 286 7 39 648 11 627 0.0 618
MS.gene55836.t1 MTR_7g024030 51.895 607 281 8 36 636 7 608 0.0 615
MS.gene55836.t1 MTR_7g025770 52.224 607 279 8 36 635 7 609 0.0 613
MS.gene55836.t1 MTR_2g022050 52.874 609 277 7 39 640 10 615 0.0 612
MS.gene55836.t1 MTR_8g032650 50.553 633 295 9 36 662 7 627 0.0 609
MS.gene55836.t1 MTR_7g029415 52.960 625 280 11 25 641 3 621 0.0 609
MS.gene55836.t1 MTR_7g026110 51.555 611 284 8 36 640 7 611 0.0 608
MS.gene55836.t1 MTR_7g026090 51.882 611 282 7 36 640 7 611 0.0 608
MS.gene55836.t1 MTR_7g011590 53.030 594 262 8 36 626 7 586 0.0 605
MS.gene55836.t1 MTR_4g079590 51.405 605 283 8 36 633 7 607 0.0 603
MS.gene55836.t1 MTR_2g437440 50.654 612 274 8 36 640 7 597 0.0 599
MS.gene55836.t1 MTR_7g078190 51.967 610 278 10 36 635 7 611 0.0 597
MS.gene55836.t1 MTR_7g025740 49.756 615 289 10 36 635 7 616 0.0 596
MS.gene55836.t1 MTR_8g103930 50.565 619 269 10 39 640 12 610 0.0 585
MS.gene55836.t1 MTR_2g010020 53.276 580 244 10 38 609 57 617 0.0 583
MS.gene55836.t1 MTR_2g010020 53.276 580 244 10 38 609 56 616 0.0 583
MS.gene55836.t1 MTR_4g092920 53.276 580 245 10 38 609 53 614 0.0 580
MS.gene55836.t1 MTR_7g025630 49.751 603 284 9 36 635 7 593 0.0 578
MS.gene55836.t1 MTR_7g078210 51.530 621 287 10 36 647 7 622 0.0 578
MS.gene55836.t1 MTR_7g074460 50.495 606 272 8 36 635 7 590 0.0 576
MS.gene55836.t1 MTR_2g038270 48.714 622 297 11 36 640 7 623 0.0 573
MS.gene55836.t1 MTR_4g027145 49.920 627 287 12 36 641 7 627 0.0 570
MS.gene55836.t1 MTR_7g026130 51.129 620 285 11 36 643 7 620 0.0 569
MS.gene55836.t1 MTR_2g032580 49.673 612 267 8 36 640 7 584 0.0 569
MS.gene55836.t1 MTR_1g017130 50.247 607 251 11 36 635 7 569 0.0 566
MS.gene55836.t1 MTR_7g026140 51.060 613 271 11 36 640 7 598 0.0 565
MS.gene55836.t1 MTR_7g025260 48.586 601 292 8 68 662 11 600 0.0 553
MS.gene55836.t1 MTR_2g005690 48.892 632 285 12 38 658 71 675 0.0 547
MS.gene55836.t1 MTR_6g033800 51.613 527 246 6 119 641 1 522 0.0 535
MS.gene55836.t1 MTR_7g451360 47.869 610 253 10 36 640 7 556 0.0 532
MS.gene55836.t1 MTR_7g007000 47.068 614 268 11 36 640 7 572 1.98e-175 513
MS.gene55836.t1 MTR_4g092920 54.016 498 204 9 119 609 1 480 1.86e-172 503
MS.gene55836.t1 MTR_7g035155 46.982 613 260 13 36 641 7 561 1.69e-168 494
MS.gene55836.t1 MTR_1g041565 46.281 605 242 12 39 635 6 535 2.26e-164 483
MS.gene55836.t1 MTR_2g040370 62.565 382 140 3 36 415 1027 1407 2.33e-153 486
MS.gene55836.t1 MTR_2g040370 62.533 379 138 4 39 414 1414 1791 7.26e-144 460
MS.gene55836.t1 MTR_2g040370 62.565 382 140 3 36 415 1027 1407 2.94e-153 486
MS.gene55836.t1 MTR_2g040370 62.434 378 138 4 39 413 1414 1790 6.08e-143 457
MS.gene55836.t1 MTR_2g040260 60.406 394 153 3 35 426 1035 1427 5.96e-153 480
MS.gene55836.t1 MTR_2g040160 60.051 393 154 3 36 426 1107 1498 3.08e-151 475
MS.gene55836.t1 MTR_4g063720 61.756 353 123 2 317 658 220 571 6.72e-151 449
MS.gene55836.t1 MTR_4g063720 70.320 219 60 3 36 250 7 224 7.67e-97 310
MS.gene55836.t1 MTR_2g032160 57.838 370 149 4 36 399 7 375 1.94e-145 431
MS.gene55836.t1 MTR_2g040350 58.228 395 158 5 38 426 820 1213 7.45e-143 447
MS.gene55836.t1 MTR_2g040220 59.487 390 148 5 36 416 1016 1404 2.96e-142 452
MS.gene55836.t1 MTR_2g040220 39.819 221 65 5 461 663 1386 1556 7.97e-31 130
MS.gene55836.t1 MTR_2g040350 58.228 395 158 5 38 426 1038 1431 1.71e-141 448
MS.gene55836.t1 MTR_6g034005 40.951 547 296 12 109 641 2 535 5.17e-128 395
MS.gene55836.t1 MTR_4g088515 47.442 430 133 9 39 462 277 619 7.14e-114 355
MS.gene55836.t1 MTR_1g077230 60.498 281 104 4 36 310 7 286 1.37e-111 338
MS.gene55836.t1 MTR_7g026080 61.265 253 87 5 36 278 7 258 1.68e-99 305
MS.gene55836.t1 MTR_7g026050 41.304 368 186 4 269 635 1 339 5.96e-86 274
MS.gene55836.t1 MTR_2g031670 52.364 275 105 7 21 274 7 276 1.66e-83 267
MS.gene55836.t1 MTR_2g031670 55.224 67 29 1 368 434 275 340 7.24e-14 73.9
MS.gene55836.t1 MTR_6g033855 40.476 378 138 5 113 487 6 299 2.31e-82 263
MS.gene55836.t1 MTR_6g033810 43.675 332 138 3 113 441 6 291 7.03e-82 261
MS.gene55836.t1 MTR_4g012050 36.387 382 236 4 37 413 2 381 1.54e-76 262
MS.gene55836.t1 MTR_5g092570 28.676 680 390 18 37 639 2 663 2.07e-74 255
MS.gene55836.t1 MTR_2g102180 32.112 464 292 7 37 483 2 459 3.87e-74 256
MS.gene55836.t1 MTR_3g051300 31.034 493 320 11 37 520 2 483 2.40e-73 252
MS.gene55836.t1 MTR_5g006180 31.609 522 294 13 29 520 19 507 3.68e-71 241
MS.gene55836.t1 MTR_2g040355 35.205 463 129 12 216 666 2 305 3.63e-64 215
MS.gene55836.t1 MTR_5g090110 31.504 492 281 13 39 508 29 486 3.12e-62 216
MS.gene55836.t1 MTR_1g077240 42.905 296 158 4 346 640 1 286 7.58e-62 208
MS.gene55836.t1 MTR_1207s0010 58.084 167 68 1 143 307 9 175 1.91e-61 203
MS.gene55836.t1 MTR_3g081170 28.932 515 322 12 12 496 8 508 3.14e-61 220
MS.gene55836.t1 MTR_5g097190 47.303 241 79 6 36 273 156 351 2.37e-58 201
MS.gene55836.t1 MTR_6g478100 49.765 213 88 5 65 273 10 207 4.34e-58 199
MS.gene55836.t1 MTR_4g115780 30.224 536 340 14 39 548 141 668 3.70e-54 197
MS.gene55836.t1 MTR_4g107920 29.880 502 318 12 39 522 21 506 2.03e-53 192
MS.gene55836.t1 MTR_5g005870 33.333 312 193 7 307 614 51 351 1.35e-46 170
MS.gene55836.t1 MTR_1g116250 38.321 274 125 6 368 640 56 286 9.66e-44 159
MS.gene55836.t1 MTR_7g026180 50.581 172 77 4 103 270 21 188 2.29e-41 154
MS.gene55836.t1 MTR_7g026180 33.486 218 109 6 427 641 144 328 2.02e-19 90.5
MS.gene55836.t1 MTR_7g074540 39.604 202 120 2 442 643 1 200 2.10e-39 144
MS.gene55836.t1 MTR_7g451390 46.667 180 93 3 462 640 10 187 5.07e-39 142
MS.gene55836.t1 MTR_6g033910 36.408 206 83 3 101 304 19 178 1.92e-34 130
MS.gene55836.t1 MTR_2g017710 35.714 252 77 6 257 506 25 193 2.31e-34 132
MS.gene55836.t1 MTR_5g005890 32.000 225 103 4 101 323 5 181 6.41e-28 111
MS.gene55836.t1 MTR_1g068900 44.681 141 70 4 452 588 23 159 8.30e-28 110
MS.gene55836.t1 MTR_6g033805 70.968 62 18 0 39 100 10 71 4.46e-24 96.7
MS.gene55836.t1 MTR_4g027235 66.176 68 21 1 36 101 7 74 8.12e-23 92.8
MS.gene55836.t1 MTR_4g027085 66.176 68 21 1 36 101 7 74 8.12e-23 92.8
MS.gene55836.t1 MTR_4g115860 38.710 93 57 0 422 514 29 121 2.13e-16 76.3
MS.gene55836.t1 MTR_6g033815 46.575 73 38 1 550 622 1 72 3.71e-15 72.4
MS.gene55836.t1 MTR_2g040375 63.636 55 20 0 424 478 51 105 7.07e-15 72.0
MS.gene55836.t1 MTR_7g026190 40.659 91 45 2 315 405 12 93 7.31e-13 68.6
MS.gene55836.t1 MTR_7g026095 37.736 106 61 2 499 600 243 347 2.08e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55836.t1 AT5G42020 89.836 669 67 1 1 669 1 668 0.0 1221
MS.gene55836.t1 AT5G28540 91.190 647 56 1 1 647 1 646 0.0 1208
MS.gene55836.t1 AT5G42020 91.091 651 57 1 19 669 24 673 0.0 1207
MS.gene55836.t1 AT1G09080 77.419 651 142 2 1 647 11 660 0.0 1016
MS.gene55836.t1 AT1G09080 77.743 647 137 2 1 647 11 650 0.0 1011
MS.gene55836.t1 AT5G42020 77.015 670 96 5 1 669 1 613 0.0 998
MS.gene55836.t1 AT3G12580 64.547 629 217 4 36 660 7 633 0.0 832
MS.gene55836.t1 AT3G09440 66.234 616 198 5 36 645 7 618 0.0 828
MS.gene55836.t1 AT3G09440 66.234 616 198 5 36 645 7 618 0.0 828
MS.gene55836.t1 AT3G09440 66.234 616 198 5 36 645 7 618 0.0 828
MS.gene55836.t1 AT3G09440 66.234 616 198 5 36 645 7 618 0.0 828
MS.gene55836.t1 AT5G02500 64.984 614 209 4 36 645 7 618 0.0 824
MS.gene55836.t1 AT1G16030 63.550 631 223 5 33 659 3 630 0.0 824
MS.gene55836.t1 AT5G02490 64.984 614 209 4 36 645 7 618 0.0 820
MS.gene55836.t1 AT1G56410 62.704 614 221 4 36 645 7 616 0.0 789
MS.gene55836.t1 AT5G09590 54.138 580 240 11 38 609 59 620 0.0 584
MS.gene55836.t1 AT4G37910 54.310 580 239 11 38 609 54 615 0.0 560
MS.gene55836.t1 AT4G37910 54.310 580 239 11 38 609 54 615 0.0 560
MS.gene55836.t1 AT4G24280 50.934 589 270 11 38 621 80 654 0.0 548
MS.gene55836.t1 AT5G49910 49.196 622 292 13 38 654 80 682 0.0 547
MS.gene55836.t1 AT5G02500 67.010 388 123 3 36 419 7 393 0.0 530
MS.gene55836.t1 AT5G02500 48.077 104 53 1 542 645 386 488 1.97e-25 111
MS.gene55836.t1 AT1G11660 28.356 663 400 14 37 639 2 649 7.18e-82 275
MS.gene55836.t1 AT1G11660 28.356 663 400 14 37 639 2 649 7.18e-82 275
MS.gene55836.t1 AT1G11660 28.356 663 400 14 37 639 2 649 7.18e-82 275
MS.gene55836.t1 AT2G32120 32.877 511 312 10 39 534 31 525 2.41e-77 258
MS.gene55836.t1 AT2G32120 32.877 511 312 10 39 534 31 525 2.41e-77 258
MS.gene55836.t1 AT1G79930 32.159 454 285 7 37 473 2 449 3.15e-75 257
MS.gene55836.t1 AT1G79930 32.159 454 285 7 37 473 2 449 5.83e-75 258
MS.gene55836.t1 AT1G79920 31.718 454 287 7 37 473 2 449 4.20e-74 253
MS.gene55836.t1 AT1G79920 31.718 454 287 7 37 473 2 449 4.20e-74 253
MS.gene55836.t1 AT1G79920 31.718 454 287 7 37 473 2 449 4.20e-74 253
MS.gene55836.t1 AT1G79920 31.718 454 287 7 37 473 2 449 4.94e-74 253
MS.gene55836.t1 AT1G11660 28.275 626 374 14 74 639 2 612 9.21e-73 249
MS.gene55836.t1 AT4G16660 26.075 721 403 21 36 639 24 731 7.94e-63 224
MS.gene55836.t1 AT4G16660 26.075 721 403 21 36 639 48 755 9.82e-63 224

Find 194 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATCAAAGATGGTCCTTTC+AGG 0.185011 4.3:+4174806 None:intergenic
ACCAAGTTAGGGACTGTTAT+TGG 0.230124 4.3:-4174992 MS.gene55836:CDS
ACCGCTGCTGCCATTGCTTA+TGG 0.244088 4.3:-4174261 MS.gene55836:CDS
AACATTCTTGTCTTTGATCT+TGG 0.281163 4.3:-4174213 MS.gene55836:CDS
GCAAACAACTGTTTCTATTC+AGG 0.282305 4.3:-4173252 MS.gene55836:intron
GGAGCTCCAGGTGGTGCATC+AGG 0.283486 4.3:-4172490 MS.gene55836:CDS
TGGTAAACAGCAGTGATAAT+TGG 0.285966 4.3:+4172523 None:intergenic
CTCGGGAACTTTGATTTGTC+TGG 0.291494 4.3:-4173073 MS.gene55836:CDS
TTCAAAAGTTGTTGTACCTT+TGG 0.293588 4.3:+4173644 None:intergenic
TTTGATGTCAAGAGACTTAT+CGG 0.304645 4.3:-4174791 MS.gene55836:CDS
GAGGAAGGGACCACCAAGTT+AGG 0.330316 4.3:-4175004 MS.gene55836:CDS
CAAACGGTATTCTAAATGTT+AGG 0.333992 4.3:-4172894 MS.gene55836:CDS
GTTTGTCCTTGTCACTGATT+TGG 0.335858 4.3:+4172686 None:intergenic
GTGGGGATGACAGTGTTTCT+AGG 0.341786 4.3:+4173311 None:intergenic
TGCTTCTTTCTTCAGATTTG+AGG 0.345147 4.3:-4174677 MS.gene55836:intron
ACCGACGATGAGAGATTGAT+TGG 0.362358 4.3:-4174860 MS.gene55836:CDS
AAGGATGCCGGTGTCATTGC+TGG 0.366360 4.3:-4174315 MS.gene55836:CDS
TCACAGGTCCCATTGTCTTC+CGG 0.366501 4.3:+4173744 None:intergenic
CTTCTCACCATCATCTCCTT+AGG 0.367766 4.3:-4175734 MS.gene55836:intron
CCAAGTTAGGGACTGTTATT+GGG 0.369182 4.3:-4174991 MS.gene55836:CDS
CTTGTCTTTGATCTTGGAGG+TGG 0.371703 4.3:-4174207 MS.gene55836:CDS
CCTTCCCCTGATGCACCACC+TGG 0.374305 4.3:+4172484 None:intergenic
TGGCTCGCTCTTCTTCTTGC+GGG 0.374938 4.3:-4175766 MS.gene55836:CDS
ACTGTTATTGGGATAGATCT+TGG 0.377061 4.3:-4174980 MS.gene55836:CDS
ACTCTTCTTTCTCAACAGTT+TGG 0.379400 4.3:+4172584 None:intergenic
CCATTCAAGTGCTTCTTTCA+CGG 0.386836 4.3:+4172618 None:intergenic
ACAAAGGATTGCCGTCTTCT+CGG 0.387262 4.3:-4173091 MS.gene55836:CDS
CTTCACTTTCTTGTCTTCCT+CGG 0.392206 4.3:+4172762 None:intergenic
CCAAAGGCAACTGCTTCATC+AGG 0.398543 4.3:+4173581 None:intergenic
TTTACTCTGACCTGAATGTA+TGG 0.402451 4.3:+4174592 None:intergenic
ATTCTTGTCTTTGATCTTGG+AGG 0.402766 4.3:-4174210 MS.gene55836:CDS
TTTCTTCAGATTTGAGGATA+AGG 0.403180 4.3:-4174671 MS.gene55836:intron
CATCAAAGATGGTCCTTTCA+GGG 0.407212 4.3:+4174807 None:intergenic
AGTTGAACAATGACTTGTTC+CGG 0.409326 4.3:-4173763 MS.gene55836:CDS
CAAAGGATTGCCGTCTTCTC+GGG 0.410284 4.3:-4173090 MS.gene55836:CDS
TGGGGAGGCTGCGAAGAATC+TGG 0.418293 4.3:-4174840 MS.gene55836:CDS
GATCACCATTACAAATGAAA+AGG 0.423968 4.3:-4172839 MS.gene55836:CDS
GTATCCAGATATCCTTCTCT+TGG 0.424894 4.3:-4173393 MS.gene55836:intron
GGTAAACAGCAGTGATAATT+GGG 0.429598 4.3:+4172524 None:intergenic
ATCATGGCACTGACTTCCTC+AGG 0.433544 4.3:+4174544 None:intergenic
ATTGATGAGATTGTTCTTGT+TGG 0.434577 4.3:-4173683 MS.gene55836:CDS
CTGGCTACTAAGAGCTCTCT+TGG 0.435105 4.3:+4173865 None:intergenic
CCCAATAACAGTCCCTAACT+TGG 0.435276 4.3:+4174991 None:intergenic
GATGTTGCACCTCTTACCCT+TGG 0.436670 4.3:-4173371 MS.gene55836:CDS
TATTATGAATAGGTGTTTGA+AGG 0.440657 4.3:-4173127 MS.gene55836:intron
CTTCATCTTAGTCAGAATCA+TGG 0.442913 4.3:+4174528 None:intergenic
AAACAGTTGTTTGCTGATCC+TGG 0.445328 4.3:+4173261 None:intergenic
TGCAACATCTGCTGCAAAAG+AGG 0.446763 4.3:-4175023 MS.gene55836:CDS
CAAGTTGGAATCAGATGAAA+AGG 0.446989 4.3:-4172656 MS.gene55836:CDS
CAAAGGTCACTTCAATTTGA+GGG 0.447858 4.3:+4172926 None:intergenic
GGACTTTGATCAGAGAATAA+TGG 0.449888 4.3:-4173981 MS.gene55836:CDS
TCAAAGGTCACTTCAATTTG+AGG 0.450757 4.3:+4172925 None:intergenic
CAGAGGTCAGGTGGAGCTCC+AGG 0.453414 4.3:-4172502 MS.gene55836:CDS
CCTGATGAAGCAGTTGCCTT+TGG 0.453901 4.3:-4173581 MS.gene55836:CDS
AGCAATGACACCGGCATCCT+TGG 0.458285 4.3:+4174317 None:intergenic
CCGACGATGAGAGATTGATT+GGG 0.463196 4.3:-4174859 MS.gene55836:CDS
GACTTGTTCCGGAAGACAAT+GGG 0.468406 4.3:-4173752 MS.gene55836:CDS
GTTTCAATTCCAAGGGTAAG+AGG 0.470308 4.3:+4173362 None:intergenic
GGATGGAAAACCATACATTC+AGG 0.477959 4.3:-4174602 MS.gene55836:CDS
TCGTCCATTGCCTTCTTCAC+AGG 0.478204 4.3:+4173728 None:intergenic
TGAAAAGGGACGCCTGAGCC+AGG 0.478721 4.3:-4172824 MS.gene55836:CDS
GGTCAATTTCCTCCTGGCTC+AGG 0.479380 4.3:+4172812 None:intergenic
TTTGAGGTTCTTTCTACAAA+CGG 0.480420 4.3:-4174144 MS.gene55836:CDS
CTCCAACAGTTTCAATTCCA+AGG 0.480598 4.3:+4173354 None:intergenic
TCCTTGTTGACAATCTTGTA+AGG 0.485086 4.3:+4174622 None:intergenic
ATGGCTCGCTCTTCTTCTTG+CGG 0.485978 4.3:-4175767 MS.gene55836:CDS
TTTCCACACGGACTTGGTGC+TGG 0.487623 4.3:+4173846 None:intergenic
TGCTGCCATTGCTTATGGAT+TGG 0.489882 4.3:-4174256 MS.gene55836:CDS
GATGCCGTGGTCACTGTCCC+AGG 0.494172 4.3:-4174469 MS.gene55836:intron
GTCTTCCTCGGCAAACTCCT+CGG 0.495002 4.3:+4172774 None:intergenic
CCTGGTAGGTGGTAAACACC+TGG 0.496443 4.3:+4173279 None:intergenic
AATGACACCGGCATCCTTGG+TGG 0.499327 4.3:+4174320 None:intergenic
ATCACCATTACAAATGAAAA+GGG 0.502193 4.3:-4172838 MS.gene55836:CDS
ACTCAATTTCCACACGGACT+TGG 0.504632 4.3:+4173840 None:intergenic
CTGGAGCTCCACCTGACCTC+TGG 0.505070 4.3:+4172503 None:intergenic
CTTCAATGATGCTCAGAGGC+AGG 0.507132 4.3:-4174343 MS.gene55836:CDS
GACAATGGGACCTGTGAAGA+AGG 0.509040 4.3:-4173738 MS.gene55836:CDS
AGTGATAATTGGGTTGCAAA+CGG 0.511011 4.3:+4172534 None:intergenic
ACCCTTGGAATTGAAACTGT+TGG 0.511117 4.3:-4173356 MS.gene55836:CDS
GAAAGAAGCACTTGAATGGC+TGG 0.513283 4.3:-4172614 MS.gene55836:CDS
GCTTATGGATTGGACAAGAA+AGG 0.514548 4.3:-4174246 MS.gene55836:CDS
CATGATTCTGACTAAGATGA+AGG 0.516191 4.3:-4174527 MS.gene55836:CDS
TCCTTGCACTGCAGCACCAA+AGG 0.516370 4.3:+4173565 None:intergenic
AAACGGTATTCTAAATGTTA+GGG 0.516624 4.3:-4172893 MS.gene55836:CDS
GAGCTCCAGGTGGTGCATCA+GGG 0.517615 4.3:-4172489 MS.gene55836:CDS
CCATCCGGTCAATTTCCTCC+TGG 0.517789 4.3:+4172806 None:intergenic
TCAAATCGAGCACGGGTAAG+TGG 0.518725 4.3:+4173788 None:intergenic
AAGAAGGCAATGGACGATGC+TGG 0.518963 4.3:-4173722 MS.gene55836:CDS
GAAGGATTACTTTGATGGAA+AGG 0.521373 4.3:-4173624 MS.gene55836:CDS
GATACGATTTCCTTGGTCGT+TGG 0.522054 4.3:+4174904 None:intergenic
GGACAAACTTGCTGACAAGT+TGG 0.525676 4.3:-4172671 MS.gene55836:CDS
AAAACAAACCTTGGAGCTGG+TGG 0.525948 4.3:+4173046 None:intergenic
TACAAGATTGTCAACAAGGA+TGG 0.525974 4.3:-4174619 MS.gene55836:CDS
AGGAAGGGACCACCAAGTTA+GGG 0.527633 4.3:-4175003 MS.gene55836:CDS
AGCAAGGACAACAGAGCACT+TGG 0.529505 4.3:-4173914 MS.gene55836:CDS
ATAAGCAATGGCAGCAGCGG+TGG 0.530847 4.3:+4174263 None:intergenic
TGATGGAAAGGAACCAAACA+AGG 0.531735 4.3:-4173612 MS.gene55836:CDS
ACTGCTGTTTACCAGAGGTC+AGG 0.531930 4.3:-4172514 MS.gene55836:CDS
ATAATTACCTAAGGAGATGA+TGG 0.532489 4.3:+4175727 None:intergenic
ACCGTTTGCATCTACTTCAA+AGG 0.532713 4.3:+4172909 None:intergenic
GAAATCGTATCACACCATCA+TGG 0.533173 4.3:-4174892 MS.gene55836:CDS
AGGCAGGCCACCAAGGATGC+CGG 0.534449 4.3:-4174327 MS.gene55836:CDS
AATAGGTGTTTGAAGGTGAG+AGG 0.535211 4.3:-4173120 MS.gene55836:intron
CCTCGGCTTCACGAACCATC+CGG 0.536252 4.3:+4172791 None:intergenic
GATGAGATTGTTCTTGTTGG+TGG 0.537949 4.3:-4173680 MS.gene55836:CDS
AAATCGTATCACACCATCAT+GGG 0.540268 4.3:-4174891 MS.gene55836:CDS
CCGTGAAAGAAGCACTTGAA+TGG 0.543546 4.3:-4172618 MS.gene55836:CDS
TGGCAGCTGTCAACCCTGAA+AGG 0.545326 4.3:-4174820 MS.gene55836:CDS
ACAAACGGAGATACCCATCT+TGG 0.546553 4.3:-4174129 MS.gene55836:CDS
TGTGTTGGTGTTTACAAGAA+CGG 0.547276 4.3:-4174944 MS.gene55836:CDS
AAATGTTAGGGCAGAAGACA+AGG 0.547526 4.3:-4172881 MS.gene55836:CDS
GAGCACTTGGAAAGCTGAGG+AGG 0.547900 4.3:-4173901 MS.gene55836:CDS
CTTGGAATTGAAACTGTTGG+AGG 0.549933 4.3:-4173353 MS.gene55836:CDS
GAAACCGCTGAAGCATTCCT+TGG 0.551326 4.3:-4174505 MS.gene55836:CDS
AAGTCTCTTGACATCAAAGA+TGG 0.553461 4.3:+4174796 None:intergenic
ATAAGTACTCACCTCCAAGA+TGG 0.554153 4.3:+4174115 None:intergenic
GCCTTTGGTGCTGCAGTGCA+AGG 0.554487 4.3:-4173566 MS.gene55836:CDS
CACAAAACAAACCTTGGAGC+TGG 0.555992 4.3:+4173043 None:intergenic
AGCTCCAGGTGGTGCATCAG+GGG 0.556960 4.3:-4172488 MS.gene55836:CDS
ATACATTCAGGTCAGAGTAA+AGG 0.559988 4.3:-4174590 MS.gene55836:CDS
ACCTTTGAAGTAGATGCAAA+CGG 0.560638 4.3:-4172910 MS.gene55836:CDS
CCAGGTGGTGCATCAGGGGA+AGG 0.561188 4.3:-4172484 MS.gene55836:CDS
TGCTCAGAGGCAGGCCACCA+AGG 0.561411 4.3:-4174334 MS.gene55836:CDS
CCAGGTGTTTACCACCTACC+AGG 0.561692 4.3:-4173279 MS.gene55836:CDS
TTCCTCAGGGCTGAACACCT+TGG 0.565203 4.3:+4174558 None:intergenic
CTGGAATCCCACCAGCTCCA+AGG 0.566039 4.3:-4173054 MS.gene55836:intron
ACATCTGCTGCAAAAGAGGA+AGG 0.567823 4.3:-4175019 MS.gene55836:CDS
CCCAATCAATCTCTCATCGT+CGG 0.570425 4.3:+4174859 None:intergenic
TAAGTACTCACCTCCAAGAT+GGG 0.574552 4.3:+4174116 None:intergenic
TGGTGCATCAGGGGAAGGAG+AGG 0.575558 4.3:-4172479 MS.gene55836:CDS
TCCAACAGTTTCAATTCCAA+GGG 0.575984 4.3:+4173355 None:intergenic
TGACTTGTTCCGGAAGACAA+TGG 0.576660 4.3:-4173753 MS.gene55836:CDS
TCCTTACAAGATTGTCAACA+AGG 0.577546 4.3:-4174623 MS.gene55836:CDS
AATAACAGTCCCTAACTTGG+TGG 0.577985 4.3:+4174994 None:intergenic
AATCAAAGTTCCCGAGAAGA+CGG 0.581537 4.3:+4173080 None:intergenic
AACGGAGATACCCATCTTGG+AGG 0.583876 4.3:-4174126 MS.gene55836:intron
TCCATAAGCAATGGCAGCAG+CGG 0.585512 4.3:+4174260 None:intergenic
CTTGTCCAATCCATAAGCAA+TGG 0.592089 4.3:+4174251 None:intergenic
CAACTCTTCAAATCGAGCAC+GGG 0.593000 4.3:+4173781 None:intergenic
TGAAGGAAAGAATTGATGCT+CGG 0.593052 4.3:-4172744 MS.gene55836:CDS
CCAGGAGGAAATTGACCGGA+TGG 0.593074 4.3:-4172806 MS.gene55836:CDS
TCAACTCTTCAAATCGAGCA+CGG 0.593848 4.3:+4173780 None:intergenic
AGGGCAGAAGACAAGGGCAC+AGG 0.595427 4.3:-4172874 MS.gene55836:CDS
GGAACAACATATTCATGTGT+TGG 0.597629 4.3:-4174959 MS.gene55836:CDS
ATGGTGTGATACGATTTCCT+TGG 0.600611 4.3:+4174897 None:intergenic
GCTGTTTACCAGAGGTCAGG+TGG 0.602705 4.3:-4172511 MS.gene55836:CDS
CCGGATGGTTCGTGAAGCCG+AGG 0.603140 4.3:-4172791 MS.gene55836:CDS
TGAGCCAGGAGGAAATTGAC+CGG 0.604755 4.3:-4172810 MS.gene55836:CDS
AAAGGTCACTTCAATTTGAG+GGG 0.605663 4.3:+4172927 None:intergenic
GAGGTGCAACATCCAAGAGA+AGG 0.607551 4.3:+4173381 None:intergenic
TAAGCAATGGCAGCAGCGGT+GGG 0.609672 4.3:+4174264 None:intergenic
AGCACTTGGAAAGCTGAGGA+GGG 0.611229 4.3:-4173900 MS.gene55836:CDS
CGATGAGAGATTGATTGGGG+AGG 0.612921 4.3:-4174855 MS.gene55836:CDS
CTTGCCAAGGAATGCTTCAG+CGG 0.613919 4.3:+4174501 None:intergenic
CGAGGAAGACAAGAAAGTGA+AGG 0.622597 4.3:-4172761 MS.gene55836:CDS
GCATAGCAAGGATATTAGCA+AGG 0.623368 4.3:-4173930 MS.gene55836:CDS
CGACGATGAGAGATTGATTG+GGG 0.628193 4.3:-4174858 MS.gene55836:CDS
TGTTTGCTGATCCTGGTAGG+TGG 0.630248 4.3:+4173268 None:intergenic
CAAGACTATTCGTGATGCCG+TGG 0.630982 4.3:-4174482 MS.gene55836:CDS
GAAATCATAGCCAACGACCA+AGG 0.633608 4.3:-4174914 MS.gene55836:CDS
CTGGTAGGTGGTAAACACCT+GGG 0.633786 4.3:+4173280 None:intergenic
AGGTCAGGTGGAGCTCCAGG+TGG 0.634814 4.3:-4172499 MS.gene55836:CDS
TTCTTGTTGGTGGAAGCACA+AGG 0.637706 4.3:-4173670 MS.gene55836:CDS
AAACAAACCTTGGAGCTGGT+GGG 0.639146 4.3:+4173047 None:intergenic
GGGACCTGTGAAGAAGGCAA+TGG 0.639949 4.3:-4173732 MS.gene55836:CDS
TTCACCTGGGACAGTGACCA+CGG 0.640825 4.3:+4174465 None:intergenic
AGTTGTTTGCTGATCCTGGT+AGG 0.644960 4.3:+4173265 None:intergenic
TGAAGCCGAGGAGTTTGCCG+AGG 0.647044 4.3:-4172779 MS.gene55836:CDS
TATGGATTGGACAAGAAAGG+TGG 0.647597 4.3:-4174243 MS.gene55836:CDS
CAAAGGCAACTGCTTCATCA+GGG 0.652946 4.3:+4173582 None:intergenic
GATGGAAAGGAACCAAACAA+GGG 0.654365 4.3:-4173611 MS.gene55836:CDS
AGTAAAGGATGGTGAGACCA+AGG 0.655359 4.3:-4174575 MS.gene55836:CDS
TGTCATTGCTGGTTTGAACG+TGG 0.655475 4.3:-4174304 MS.gene55836:CDS
TTATCACTGCTGTTTACCAG+AGG 0.655496 4.3:-4172519 MS.gene55836:CDS
CATCTGCTGCAAAAGAGGAA+GGG 0.658549 4.3:-4175018 MS.gene55836:CDS
ATGGAAAGGAACCAAACAAG+GGG 0.659203 4.3:-4173610 MS.gene55836:CDS
ATTCAGGTCAGAGTAAAGGA+TGG 0.659644 4.3:-4174586 MS.gene55836:CDS
TCATGGCACTGACTTCCTCA+GGG 0.661707 4.3:+4174545 None:intergenic
GCAAGAAGAAGAGCGAGCCA+TGG 0.662253 4.3:+4175769 None:intergenic
ACAGAGCACTTGGAAAGCTG+AGG 0.662613 4.3:-4173904 MS.gene55836:CDS
GTTCAAACCAGCAATGACAC+CGG 0.667444 4.3:+4174308 None:intergenic
TCGGTGAAAGAAACCCATGA+TGG 0.669628 4.3:+4174878 None:intergenic
CATCACGAATAGTCTTGCCA+AGG 0.671739 4.3:+4174488 None:intergenic
GACCAAGGTGTTCAGCCCTG+AGG 0.674395 4.3:-4174560 MS.gene55836:CDS
TAGCCAGCACCAAGTCCGTG+TGG 0.679452 4.3:-4173849 MS.gene55836:CDS
TGGAAGCACAAGGATTCCAA+AGG 0.684118 4.3:-4173660 MS.gene55836:CDS
AATGTTAGGGCAGAAGACAA+GGG 0.691069 4.3:-4172880 MS.gene55836:CDS
AGGTGAGAGGAGTCTCACAA+AGG 0.713013 4.3:-4173107 MS.gene55836:CDS
AAAGGGACGCCTGAGCCAGG+AGG 0.717721 4.3:-4172821 MS.gene55836:CDS
CTTACTTCAATGATGCTCAG+AGG 0.721672 4.3:-4174347 MS.gene55836:CDS
AGTATCTTGACAATTGACAA+TGG 0.727159 4.3:-4174171 MS.gene55836:CDS
GAGGGTGGTGAAGAAACCAA+AGG 0.727490 4.3:-4173527 MS.gene55836:intron
AAAGTGACTCAATTTCCACA+CGG 0.743191 4.3:+4173834 None:intergenic
TGGAAAGGAACCAAACAAGG+GGG 0.770257 4.3:-4173609 MS.gene55836:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACTCAAAACATTTAAAT+CGG + chr4.3:4173129-4173148 None:intergenic 15.0%
!! AACATAAATCAACTATTTAA+AGG + chr4.3:4173056-4173075 None:intergenic 15.0%
!! ATTAATTAACAGTCTTTAAA+AGG + chr4.3:4172812-4172831 None:intergenic 15.0%
!! TTGTTATAATTTGATGTAAT+GGG - chr4.3:4173497-4173516 MS.gene55836:intron 15.0%
!!! TGTCTATTTTTATTATGAAT+AGG - chr4.3:4175077-4175096 MS.gene55836:intron 15.0%
!!! TTTGTTATAATTTGATGTAA+TGG - chr4.3:4173496-4173515 MS.gene55836:intron 15.0%
!! AAATACAATATTGTGTAATG+AGG - chr4.3:4175031-4175050 MS.gene55836:CDS 20.0%
!! AACAAATAAAAAGGTCTAAT+TGG + chr4.3:4172875-4172894 None:intergenic 20.0%
!! AATACAATATTGTGTAATGA+GGG - chr4.3:4175032-4175051 MS.gene55836:CDS 20.0%
!! AGATATGTAATAATTACCTA+AGG + chr4.3:4172499-4172518 None:intergenic 20.0%
!! ATGTTAAAATGAAGACAAAA+TGG + chr4.3:4173822-4173841 None:intergenic 20.0%
!! ATTACAAATAGAACCTTAAA+CGG + chr4.3:4173029-4173048 None:intergenic 20.0%
!! GATAATCCAAACAAATAAAA+AGG + chr4.3:4172884-4172903 None:intergenic 20.0%
!! TACACAATATTGTATTTAGA+AGG + chr4.3:4175028-4175047 None:intergenic 20.0%
!! TGTTAAAATGAAGACAAAAT+GGG + chr4.3:4173821-4173840 None:intergenic 20.0%
!!! ATTAGACCTTTTTATTTGTT+TGG - chr4.3:4172875-4172894 MS.gene55836:CDS 20.0%
!!! GTTTTAGATCTTTGATTTTA+TGG - chr4.3:4172580-4172599 MS.gene55836:CDS 20.0%
!!! TAGTTGATTTATGTTGTTTT+CGG - chr4.3:4173061-4173080 MS.gene55836:CDS 20.0%
!!! TGATTAATCAATTTTTCTTG+TGG - chr4.3:4175248-4175267 MS.gene55836:intron 20.0%
!!! TTACTAGTGATTTATTTTAC+TGG - chr4.3:4172941-4172960 MS.gene55836:intron 20.0%
!!! TTGTTTTGTTTTGAATTTTG+TGG - chr4.3:4172750-4172769 MS.gene55836:CDS 20.0%
! AAACGGTATTCTAAATGTTA+GGG - chr4.3:4175321-4175340 MS.gene55836:intron 25.0%
! ACAAAAGCAATGAGAAAAAA+AGG + chr4.3:4172559-4172578 None:intergenic 25.0%
! AGATGAAAAGGAAAAAATTG+AGG - chr4.3:4175570-4175589 MS.gene55836:intron 25.0%
! ATACAATATTGTGTAATGAG+GGG - chr4.3:4175033-4175052 MS.gene55836:CDS 25.0%
! ATCACCATTACAAATGAAAA+GGG - chr4.3:4175376-4175395 MS.gene55836:intron 25.0%
! GTTAAAATGAAGACAAAATG+GGG + chr4.3:4173820-4173839 None:intergenic 25.0%
! TATTATGAATAGGTGTTTGA+AGG - chr4.3:4175087-4175106 MS.gene55836:intron 25.0%
! TTACAAATAGAACCTTAAAC+GGG + chr4.3:4173028-4173047 None:intergenic 25.0%
!!! AGTTGATTTATGTTGTTTTC+GGG - chr4.3:4173062-4173081 MS.gene55836:CDS 25.0%
!!! TATTTGTTATTGATGCAAGT+AGG - chr4.3:4174758-4174777 MS.gene55836:intron 25.0%
!!! TGTCTTCATTTTAACATTTC+TGG - chr4.3:4173825-4173844 MS.gene55836:CDS 25.0%
!!! TTTATTTTACTGGCTTCAAA+TGG - chr4.3:4172951-4172970 MS.gene55836:intron 25.0%
AACATTCTTGTCTTTGATCT+TGG - chr4.3:4174001-4174020 MS.gene55836:intron 30.0%
AACGGGAAAAAACATGATTA+TGG + chr4.3:4173011-4173030 None:intergenic 30.0%
AATAAAAATAGACAACACCC+CGG + chr4.3:4175071-4175090 None:intergenic 30.0%
AATTAGAATGTGATGCAAGT+AGG + chr4.3:4172630-4172649 None:intergenic 30.0%
AGTATCTTGACAATTGACAA+TGG - chr4.3:4174043-4174062 MS.gene55836:intron 30.0%
ATAATTACCTAAGGAGATGA+TGG + chr4.3:4172490-4172509 None:intergenic 30.0%
ATAGACTATAATGGTACCTT+TGG + chr4.3:4174706-4174725 None:intergenic 30.0%
ATTAGAATGTGATGCAAGTA+GGG + chr4.3:4172629-4172648 None:intergenic 30.0%
ATTGATGAGATTGTTCTTGT+TGG - chr4.3:4174531-4174550 MS.gene55836:CDS 30.0%
CAAACGGTATTCTAAATGTT+AGG - chr4.3:4175320-4175339 MS.gene55836:intron 30.0%
CTTCTATGAACTTTCTCTAT+TGG - chr4.3:4175206-4175225 MS.gene55836:intron 30.0%
GATCACCATTACAAATGAAA+AGG - chr4.3:4175375-4175394 MS.gene55836:intron 30.0%
TAACTCTTCAATTGTTTACC+AGG - chr4.3:4174207-4174226 MS.gene55836:CDS 30.0%
TAATTAATACAATTACGCGC+CGG - chr4.3:4172824-4172843 MS.gene55836:CDS 30.0%
TGATATCACAAAACAAACCT+TGG + chr4.3:4175180-4175199 None:intergenic 30.0%
TTCAAAAGTTGTTGTACCTT+TGG + chr4.3:4174573-4174592 None:intergenic 30.0%
TTGTCGTTATAATATTGCGA+TGG - chr4.3:4173148-4173167 MS.gene55836:intron 30.0%
TTTCTTCAGATTTGAGGATA+AGG - chr4.3:4173543-4173562 MS.gene55836:CDS 30.0%
TTTGATGTCAAGAGACTTAT+CGG - chr4.3:4173423-4173442 MS.gene55836:intron 30.0%
! GTTTTTCATGTTGTAGACAT+AGG + chr4.3:4175509-4175528 None:intergenic 30.0%
! TTTGAGGTTCTTTCTACAAA+CGG - chr4.3:4174070-4174089 MS.gene55836:intron 30.0%
! TTTTATGGGATGTGATTACA+TGG - chr4.3:4173091-4173110 MS.gene55836:CDS 30.0%
!! AAAGGTACAACAACTTTTGA+AGG - chr4.3:4174572-4174591 MS.gene55836:CDS 30.0%
!! AATTGACAATGGTGTTTTTG+AGG - chr4.3:4174054-4174073 MS.gene55836:intron 30.0%
!! CTTCTAAGATTCAAAGAAAC+CGG + chr4.3:4172846-4172865 None:intergenic 30.0%
!! CTTTTGAAGGATTACTTTGA+TGG - chr4.3:4174585-4174604 MS.gene55836:CDS 30.0%
!!! ATCATGTTTTTTCCCGTTTA+AGG - chr4.3:4173013-4173032 MS.gene55836:intron 30.0%
!!! GAAATTGAGTCACTTTTTGA+TGG - chr4.3:4174387-4174406 MS.gene55836:intron 30.0%
!!! TTTTCGGGTAATGCTTTTAT+GGG - chr4.3:4173077-4173096 MS.gene55836:CDS 30.0%
AAAGGTCACTTCAATTTGAG+GGG + chr4.3:4175290-4175309 None:intergenic 35.0%
AAAGTGACTCAATTTCCACA+CGG + chr4.3:4174383-4174402 None:intergenic 35.0%
AAATCGTATCACACCATCAT+GGG - chr4.3:4173323-4173342 MS.gene55836:CDS 35.0%
AAGTCTCTTGACATCAAAGA+TGG + chr4.3:4173421-4173440 None:intergenic 35.0%
ACAATTGAAGAGTTAGCACT+TGG + chr4.3:4174202-4174221 None:intergenic 35.0%
ACTCTTCTTTCTCAACAGTT+TGG + chr4.3:4175633-4175652 None:intergenic 35.0%
ACTGTTATTGGGATAGATCT+TGG - chr4.3:4173234-4173253 MS.gene55836:intron 35.0%
AGCAATATGCAGTGGAATAA+TGG + chr4.3:4174995-4175014 None:intergenic 35.0%
AGCTACCTAATGCAATTGAA+AGG + chr4.3:4174736-4174755 None:intergenic 35.0%
ATACATTCAGGTCAGAGTAA+AGG - chr4.3:4173624-4173643 MS.gene55836:CDS 35.0%
ATATTGCGATGGTTTATTGC+AGG - chr4.3:4173159-4173178 MS.gene55836:intron 35.0%
ATTCTTGTCTTTGATCTTGG+AGG - chr4.3:4174004-4174023 MS.gene55836:intron 35.0%
CAAAGGTCACTTCAATTTGA+GGG + chr4.3:4175291-4175310 None:intergenic 35.0%
CATGATTCTGACTAAGATGA+AGG - chr4.3:4173687-4173706 MS.gene55836:CDS 35.0%
CTTCATCTTAGTCAGAATCA+TGG + chr4.3:4173689-4173708 None:intergenic 35.0%
GAAAAACCAAATCAGTGACA+AGG - chr4.3:4175522-4175541 MS.gene55836:intron 35.0%
GAAAGTAACCAAATTGCATG+AGG + chr4.3:4173795-4173814 None:intergenic 35.0%
GAAGGATTACTTTGATGGAA+AGG - chr4.3:4174590-4174609 MS.gene55836:CDS 35.0%
GGAACAACATATTCATGTGT+TGG - chr4.3:4173255-4173274 MS.gene55836:CDS 35.0%
GGACTTTGATCAGAGAATAA+TGG - chr4.3:4174233-4174252 MS.gene55836:CDS 35.0%
GGCTAGAGTATAGACTATAA+TGG + chr4.3:4174715-4174734 None:intergenic 35.0%
GGTAAACAGCAGTGATAATT+GGG + chr4.3:4175693-4175712 None:intergenic 35.0%
TACAAGATTGTCAACAAGGA+TGG - chr4.3:4173595-4173614 MS.gene55836:CDS 35.0%
TCAAAGGTCACTTCAATTTG+AGG + chr4.3:4175292-4175311 None:intergenic 35.0%
TCCAACAGTTTCAATTCCAA+GGG + chr4.3:4174862-4174881 None:intergenic 35.0%
TCCTTACAAGATTGTCAACA+AGG - chr4.3:4173591-4173610 MS.gene55836:CDS 35.0%
TCCTTGTTGACAATCTTGTA+AGG + chr4.3:4173595-4173614 None:intergenic 35.0%
TGAAGGAAAGAATTGATGCT+CGG - chr4.3:4175470-4175489 MS.gene55836:intron 35.0%
TGCTTCTTTCTTCAGATTTG+AGG - chr4.3:4173537-4173556 MS.gene55836:CDS 35.0%
TGGTAAACAGCAGTGATAAT+TGG + chr4.3:4175694-4175713 None:intergenic 35.0%
TGTAATTCACCAATTCACCT+GGG + chr4.3:4173765-4173784 None:intergenic 35.0%
TTATTCCACTGCATATTGCT+AGG - chr4.3:4174995-4175014 MS.gene55836:CDS 35.0%
TTCTTGTGGTAATTGAACAG+AGG - chr4.3:4175262-4175281 MS.gene55836:intron 35.0%
TTGTAATTCACCAATTCACC+TGG + chr4.3:4173766-4173785 None:intergenic 35.0%
TTTACTCTGACCTGAATGTA+TGG + chr4.3:4173625-4173644 None:intergenic 35.0%
! AACTTGTTCCTCATGCAATT+TGG - chr4.3:4173784-4173803 MS.gene55836:CDS 35.0%
! AGTGATAATTGGGTTGCAAA+CGG + chr4.3:4175683-4175702 None:intergenic 35.0%
! CAAGTTGGAATCAGATGAAA+AGG - chr4.3:4175558-4175577 MS.gene55836:intron 35.0%
! CAATGAGAGAGTGTAATACT+AGG + chr4.3:4174787-4174806 None:intergenic 35.0%
! GATCAAGAAAAAGCATAGCA+AGG - chr4.3:4174272-4174291 MS.gene55836:CDS 35.0%
! TCTAGCCTTTCAATTGCATT+AGG - chr4.3:4174728-4174747 MS.gene55836:intron 35.0%
! TGTGTTGGTGTTTACAAGAA+CGG - chr4.3:4173270-4173289 MS.gene55836:CDS 35.0%
!! ACCTTTGAAGTAGATGCAAA+CGG - chr4.3:4175304-4175323 MS.gene55836:intron 35.0%
!! AGTTGAACAATGACTTGTTC+CGG - chr4.3:4174451-4174470 MS.gene55836:intron 35.0%
!! GCAAACAACTGTTTCTATTC+AGG - chr4.3:4174962-4174981 MS.gene55836:CDS 35.0%
!!! GTTTTCGGGTAATGCTTTTA+TGG - chr4.3:4173076-4173095 MS.gene55836:CDS 35.0%
AAATGTTAGGGCAGAAGACA+AGG - chr4.3:4175333-4175352 MS.gene55836:intron 40.0%
AATAACAGTCCCTAACTTGG+TGG + chr4.3:4173223-4173242 None:intergenic 40.0%
AATAGGTGTTTGAAGGTGAG+AGG - chr4.3:4175094-4175113 MS.gene55836:intron 40.0%
AATCAAAGTTCCCGAGAAGA+CGG + chr4.3:4175137-4175156 None:intergenic 40.0%
AATGTCCTAGCAATATGCAG+TGG + chr4.3:4175003-4175022 None:intergenic 40.0%
AATGTTAGGGCAGAAGACAA+GGG - chr4.3:4175334-4175353 MS.gene55836:intron 40.0%
ACATCAAAGATGGTCCTTTC+AGG + chr4.3:4173411-4173430 None:intergenic 40.0%
ACATCCAAGAGAAGGATATC+TGG + chr4.3:4174828-4174847 None:intergenic 40.0%
ACCAAGTTAGGGACTGTTAT+TGG - chr4.3:4173222-4173241 MS.gene55836:intron 40.0%
ACCCTTGGAATTGAAACTGT+TGG - chr4.3:4174858-4174877 MS.gene55836:CDS 40.0%
ACCGTTTGCATCTACTTCAA+AGG + chr4.3:4175308-4175327 None:intergenic 40.0%
ATAAGTACTCACCTCCAAGA+TGG + chr4.3:4174102-4174121 None:intergenic 40.0%
ATGGAAAGGAACCAAACAAG+GGG - chr4.3:4174604-4174623 MS.gene55836:CDS 40.0%
ATGGTGTGATACGATTTCCT+TGG + chr4.3:4173320-4173339 None:intergenic 40.0%
ATTCAGGTCAGAGTAAAGGA+TGG - chr4.3:4173628-4173647 MS.gene55836:CDS 40.0%
CATCAAAGATGGTCCTTTCA+GGG + chr4.3:4173410-4173429 None:intergenic 40.0%
CCAAGTTAGGGACTGTTATT+GGG - chr4.3:4173223-4173242 MS.gene55836:intron 40.0%
CCATTCAAGTGCTTCTTTCA+CGG + chr4.3:4175599-4175618 None:intergenic 40.0%
CTCCAACAGTTTCAATTCCA+AGG + chr4.3:4174863-4174882 None:intergenic 40.0%
CTTACTTCAATGATGCTCAG+AGG - chr4.3:4173867-4173886 MS.gene55836:CDS 40.0%
CTTCAATTGTTTACCAGGTG+AGG - chr4.3:4174212-4174231 MS.gene55836:CDS 40.0%
CTTCACTTTCTTGTCTTCCT+CGG + chr4.3:4175455-4175474 None:intergenic 40.0%
CTTGGAATTGAAACTGTTGG+AGG - chr4.3:4174861-4174880 MS.gene55836:CDS 40.0%
CTTGTCCAATCCATAAGCAA+TGG + chr4.3:4173966-4173985 None:intergenic 40.0%
GAAATCGTATCACACCATCA+TGG - chr4.3:4173322-4173341 MS.gene55836:CDS 40.0%
GATGAGATTGTTCTTGTTGG+TGG - chr4.3:4174534-4174553 MS.gene55836:CDS 40.0%
GATGGAAAGGAACCAAACAA+GGG - chr4.3:4174603-4174622 MS.gene55836:CDS 40.0%
GCATAGCAAGGATATTAGCA+AGG - chr4.3:4174284-4174303 MS.gene55836:CDS 40.0%
GGATGGAAAACCATACATTC+AGG - chr4.3:4173612-4173631 MS.gene55836:CDS 40.0%
GTATCCAGATATCCTTCTCT+TGG - chr4.3:4174821-4174840 MS.gene55836:CDS 40.0%
GTTTCAATTCCAAGGGTAAG+AGG + chr4.3:4174855-4174874 None:intergenic 40.0%
TAAGTACTCACCTCCAAGAT+GGG + chr4.3:4174101-4174120 None:intergenic 40.0%
TCAACTCTTCAAATCGAGCA+CGG + chr4.3:4174437-4174456 None:intergenic 40.0%
TGATGGAAAGGAACCAAACA+AGG - chr4.3:4174602-4174621 MS.gene55836:CDS 40.0%
TGGGATGTGATTACATGGTT+TGG - chr4.3:4173096-4173115 MS.gene55836:CDS 40.0%
! AAACAGTTGTTTGCTGATCC+TGG + chr4.3:4174956-4174975 None:intergenic 40.0%
! GCGTCCCTTTTCATTTGTAA+TGG + chr4.3:4175383-4175402 None:intergenic 40.0%
! GTTTGTCCTTGTCACTGATT+TGG + chr4.3:4175531-4175550 None:intergenic 40.0%
! TTATCACTGCTGTTTACCAG+AGG - chr4.3:4175695-4175714 MS.gene55836:intron 40.0%
!! GCTTATGGATTGGACAAGAA+AGG - chr4.3:4173968-4173987 MS.gene55836:CDS 40.0%
!! TATGGATTGGACAAGAAAGG+TGG - chr4.3:4173971-4173990 MS.gene55836:CDS 40.0%
!!! AAACACCTGGGATTTTTTGG+TGG + chr4.3:4174925-4174944 None:intergenic 40.0%
!!! AACACCTGGGATTTTTTGGT+GGG + chr4.3:4174924-4174943 None:intergenic 40.0%
!!! GGTAAACACCTGGGATTTTT+TGG + chr4.3:4174928-4174947 None:intergenic 40.0%
!!! TGCAAGGAAGCATTTTGAGT+GGG - chr4.3:4174664-4174683 MS.gene55836:CDS 40.0%
AAAACAAACCTTGGAGCTGG+TGG + chr4.3:4175171-4175190 None:intergenic 45.0%
AAACAAACCTTGGAGCTGGT+GGG + chr4.3:4175170-4175189 None:intergenic 45.0%
ACAAACGGAGATACCCATCT+TGG - chr4.3:4174085-4174104 MS.gene55836:intron 45.0%
ACAAAGGATTGCCGTCTTCT+CGG - chr4.3:4175123-4175142 MS.gene55836:intron 45.0%
ACATCTGCTGCAAAAGAGGA+AGG - chr4.3:4173195-4173214 MS.gene55836:intron 45.0%
ACCGACGATGAGAGATTGAT+TGG - chr4.3:4173354-4173373 MS.gene55836:CDS 45.0%
ACTCAATTTCCACACGGACT+TGG + chr4.3:4174377-4174396 None:intergenic 45.0%
AGTAAAGGATGGTGAGACCA+AGG - chr4.3:4173639-4173658 MS.gene55836:CDS 45.0%
CAAAGGCAACTGCTTCATCA+GGG + chr4.3:4174635-4174654 None:intergenic 45.0%
CAACTCTTCAAATCGAGCAC+GGG + chr4.3:4174436-4174455 None:intergenic 45.0%
CACAAAACAAACCTTGGAGC+TGG + chr4.3:4175174-4175193 None:intergenic 45.0%
CATCTGCTGCAAAAGAGGAA+GGG - chr4.3:4173196-4173215 MS.gene55836:intron 45.0%
CCCAATAACAGTCCCTAACT+TGG + chr4.3:4173226-4173245 None:intergenic 45.0%
CCCAATCAATCTCTCATCGT+CGG + chr4.3:4173358-4173377 None:intergenic 45.0%
CCGACGATGAGAGATTGATT+GGG - chr4.3:4173355-4173374 MS.gene55836:CDS 45.0%
CGACGATGAGAGATTGATTG+GGG - chr4.3:4173356-4173375 MS.gene55836:CDS 45.0%
CGAGGAAGACAAGAAAGTGA+AGG - chr4.3:4175453-4175472 MS.gene55836:intron 45.0%
CTTCTCACCATCATCTCCTT+AGG - chr4.3:4172480-4172499 MS.gene55836:CDS 45.0%
CTTGTCTTTGATCTTGGAGG+TGG - chr4.3:4174007-4174026 MS.gene55836:intron 45.0%
GAAATCATAGCCAACGACCA+AGG - chr4.3:4173300-4173319 MS.gene55836:CDS 45.0%
GATACGATTTCCTTGGTCGT+TGG + chr4.3:4173313-4173332 None:intergenic 45.0%
GTTCAAACCAGCAATGACAC+CGG + chr4.3:4173909-4173928 None:intergenic 45.0%
TCGGTGAAAGAAACCCATGA+TGG + chr4.3:4173339-4173358 None:intergenic 45.0%
TGCAACATCTGCTGCAAAAG+AGG - chr4.3:4173191-4173210 MS.gene55836:intron 45.0%
TGCTGCCATTGCTTATGGAT+TGG - chr4.3:4173958-4173977 MS.gene55836:CDS 45.0%
TGGAAAGGAACCAAACAAGG+GGG - chr4.3:4174605-4174624 MS.gene55836:CDS 45.0%
! AGTTGTTTGCTGATCCTGGT+AGG + chr4.3:4174952-4174971 None:intergenic 45.0%
! CATCACGAATAGTCTTGCCA+AGG + chr4.3:4173729-4173748 None:intergenic 45.0%
! GACTTGTTCCGGAAGACAAT+GGG - chr4.3:4174462-4174481 MS.gene55836:intron 45.0%
! TGGAAGCACAAGGATTCCAA+AGG - chr4.3:4174554-4174573 MS.gene55836:CDS 45.0%
! TTCTTGTTGGTGGAAGCACA+AGG - chr4.3:4174544-4174563 MS.gene55836:CDS 45.0%
!! CCGTGAAAGAAGCACTTGAA+TGG - chr4.3:4175596-4175615 MS.gene55836:intron 45.0%
!! CTCGGGAACTTTGATTTGTC+TGG - chr4.3:4175141-4175160 MS.gene55836:intron 45.0%
!! GAAAGAAGCACTTGAATGGC+TGG - chr4.3:4175600-4175619 MS.gene55836:intron 45.0%
!! GGACAAACTTGCTGACAAGT+TGG - chr4.3:4175543-4175562 MS.gene55836:intron 45.0%
!! TGACTTGTTCCGGAAGACAA+TGG - chr4.3:4174461-4174480 MS.gene55836:intron 45.0%
!! TGTCATTGCTGGTTTGAACG+TGG - chr4.3:4173910-4173929 MS.gene55836:CDS 45.0%
!!! ACACCTGGGATTTTTTGGTG+GGG + chr4.3:4174923-4174942 None:intergenic 45.0%
!!! GCAAGGAAGCATTTTGAGTG+GGG - chr4.3:4174665-4174684 MS.gene55836:CDS 45.0%
!!! GTGCAAGGAAGCATTTTGAG+TGG - chr4.3:4174663-4174682 MS.gene55836:CDS 45.0%
AACGGAGATACCCATCTTGG+AGG - chr4.3:4174088-4174107 MS.gene55836:intron 50.0%
AAGAAGGCAATGGACGATGC+TGG - chr4.3:4174492-4174511 MS.gene55836:CDS 50.0%
AGCACTTGGAAAGCTGAGGA+GGG - chr4.3:4174314-4174333 MS.gene55836:CDS 50.0%
AGGAAGGGACCACCAAGTTA+GGG - chr4.3:4173211-4173230 MS.gene55836:intron 50.0%
AGGTGAGAGGAGTCTCACAA+AGG - chr4.3:4175107-4175126 MS.gene55836:intron 50.0%
ATGGCTCGCTCTTCTTCTTG+CGG - chr4.3:4172447-4172466 MS.gene55836:CDS 50.0%
CAAAGGATTGCCGTCTTCTC+GGG - chr4.3:4175124-4175143 MS.gene55836:intron 50.0%
CAAGACTATTCGTGATGCCG+TGG - chr4.3:4173732-4173751 MS.gene55836:CDS 50.0%
CATCCCCACCAAAAAATCCC+AGG - chr4.3:4174917-4174936 MS.gene55836:CDS 50.0%
CCAAAGGCAACTGCTTCATC+AGG + chr4.3:4174636-4174655 None:intergenic 50.0%
CCTGATGAAGCAGTTGCCTT+TGG - chr4.3:4174633-4174652 MS.gene55836:CDS 50.0%
CGATGAGAGATTGATTGGGG+AGG - chr4.3:4173359-4173378 MS.gene55836:CDS 50.0%
CTCTGATCAAAGTCCTCACC+TGG + chr4.3:4174228-4174247 None:intergenic 50.0%
CTGGCTACTAAGAGCTCTCT+TGG + chr4.3:4174352-4174371 None:intergenic 50.0%
CTGGTAGGTGGTAAACACCT+GGG + chr4.3:4174937-4174956 None:intergenic 50.0%
CTTCAATGATGCTCAGAGGC+AGG - chr4.3:4173871-4173890 MS.gene55836:CDS 50.0%
CTTGCCAAGGAATGCTTCAG+CGG + chr4.3:4173716-4173735 None:intergenic 50.0%
GACAATGGGACCTGTGAAGA+AGG - chr4.3:4174476-4174495 MS.gene55836:CDS 50.0%
GAGGGTGGTGAAGAAACCAA+AGG - chr4.3:4174687-4174706 MS.gene55836:intron 50.0%
GAGGTGCAACATCCAAGAGA+AGG + chr4.3:4174836-4174855 None:intergenic 50.0%
GATGTTGCACCTCTTACCCT+TGG - chr4.3:4174843-4174862 MS.gene55836:CDS 50.0%
GTGGGGATGACAGTGTTTCT+AGG + chr4.3:4174906-4174925 None:intergenic 50.0%
TCAAATCGAGCACGGGTAAG+TGG + chr4.3:4174429-4174448 None:intergenic 50.0%
TCACAGGTCCCATTGTCTTC+CGG + chr4.3:4174473-4174492 None:intergenic 50.0%
TCCATAAGCAATGGCAGCAG+CGG + chr4.3:4173957-4173976 None:intergenic 50.0%
TCGTCCATTGCCTTCTTCAC+AGG + chr4.3:4174489-4174508 None:intergenic 50.0%
TGAGCCAGGAGGAAATTGAC+CGG - chr4.3:4175404-4175423 MS.gene55836:intron 50.0%
! ACAGAGCACTTGGAAAGCTG+AGG - chr4.3:4174310-4174329 MS.gene55836:CDS 50.0%
! ACTGCTGTTTACCAGAGGTC+AGG - chr4.3:4175700-4175719 MS.gene55836:intron 50.0%
! AGCAAGGACAACAGAGCACT+TGG - chr4.3:4174300-4174319 MS.gene55836:CDS 50.0%
! GAAACCGCTGAAGCATTCCT+TGG - chr4.3:4173709-4173728 MS.gene55836:CDS 50.0%
! TGTTTGCTGATCCTGGTAGG+TGG + chr4.3:4174949-4174968 None:intergenic 50.0%
!! ATCATGGCACTGACTTCCTC+AGG + chr4.3:4173673-4173692 None:intergenic 50.0%
!! TCATGGCACTGACTTCCTCA+GGG + chr4.3:4173672-4173691 None:intergenic 50.0%
!! TGAGGGGTGTTGTACTCAAC+CGG - chr4.3:4175049-4175068 MS.gene55836:intron 50.0%
!!! AGGAAGCATTTTGAGTGGGG+AGG - chr4.3:4174668-4174687 MS.gene55836:intron 50.0%
!!! GGAAGCATTTTGAGTGGGGA+GGG - chr4.3:4174669-4174688 MS.gene55836:intron 50.0%
AATGACACCGGCATCCTTGG+TGG + chr4.3:4173897-4173916 None:intergenic 55.0%
ACCGCTGCTGCCATTGCTTA+TGG - chr4.3:4173953-4173972 MS.gene55836:CDS 55.0%
AGCAATGACACCGGCATCCT+TGG + chr4.3:4173900-4173919 None:intergenic 55.0%
ATAAGCAATGGCAGCAGCGG+TGG + chr4.3:4173954-4173973 None:intergenic 55.0%
CCAGGAGGAAATTGACCGGA+TGG - chr4.3:4175408-4175427 MS.gene55836:intron 55.0%
CCAGGTGTTTACCACCTACC+AGG - chr4.3:4174935-4174954 MS.gene55836:CDS 55.0%
CCATCCGGTCAATTTCCTCC+TGG + chr4.3:4175411-4175430 None:intergenic 55.0%
CCTGGTAGGTGGTAAACACC+TGG + chr4.3:4174938-4174957 None:intergenic 55.0%
GAGCACTTGGAAAGCTGAGG+AGG - chr4.3:4174313-4174332 MS.gene55836:CDS 55.0%
GAGGAAGGGACCACCAAGTT+AGG - chr4.3:4173210-4173229 MS.gene55836:intron 55.0%
GCTGTTTACCAGAGGTCAGG+TGG - chr4.3:4175703-4175722 MS.gene55836:intron 55.0%
GGGACCTGTGAAGAAGGCAA+TGG - chr4.3:4174482-4174501 MS.gene55836:CDS 55.0%
GGTCAATTTCCTCCTGGCTC+AGG + chr4.3:4175405-4175424 None:intergenic 55.0%
GGTCACTGTCCCAGGTGAAT+TGG - chr4.3:4173753-4173772 MS.gene55836:CDS 55.0%
GTCTTCCTCGGCAAACTCCT+CGG + chr4.3:4175443-4175462 None:intergenic 55.0%
TAAGCAATGGCAGCAGCGGT+GGG + chr4.3:4173953-4173972 None:intergenic 55.0%
TCAGGGTTGACCCCCTTGTT+TGG + chr4.3:4174618-4174637 None:intergenic 55.0%
TCCTTGCACTGCAGCACCAA+AGG + chr4.3:4174652-4174671 None:intergenic 55.0%
TGGCAGCTGTCAACCCTGAA+AGG - chr4.3:4173394-4173413 MS.gene55836:intron 55.0%
TGGCTCGCTCTTCTTCTTGC+GGG - chr4.3:4172448-4172467 MS.gene55836:CDS 55.0%
TTCACCTGGGACAGTGACCA+CGG + chr4.3:4173752-4173771 None:intergenic 55.0%
TTCCTCAGGGCTGAACACCT+TGG + chr4.3:4173659-4173678 None:intergenic 55.0%
!! AAGGATGCCGGTGTCATTGC+TGG - chr4.3:4173899-4173918 MS.gene55836:CDS 55.0%
!! AGCATTTTGAGTGGGGAGGG+TGG - chr4.3:4174672-4174691 MS.gene55836:intron 55.0%
!! AGGGGTGTTGTACTCAACCG+GGG - chr4.3:4175051-4175070 MS.gene55836:intron 55.0%
!! GAGGGGTGTTGTACTCAACC+GGG - chr4.3:4175050-4175069 MS.gene55836:intron 55.0%
!! TTTCCACACGGACTTGGTGC+TGG + chr4.3:4174371-4174390 None:intergenic 55.0%
AGCTCCAGGTGGTGCATCAG+GGG - chr4.3:4175726-4175745 MS.gene55836:intron 60.0%
CCTCGGCTTCACGAACCATC+CGG + chr4.3:4175426-4175445 None:intergenic 60.0%
CTGGAATCCCACCAGCTCCA+AGG - chr4.3:4175160-4175179 MS.gene55836:intron 60.0%
GAGCTCCAGGTGGTGCATCA+GGG - chr4.3:4175725-4175744 MS.gene55836:intron 60.0%
TAGCCAGCACCAAGTCCGTG+TGG - chr4.3:4174365-4174384 MS.gene55836:intron 60.0%
TGAAAAGGGACGCCTGAGCC+AGG - chr4.3:4175390-4175409 MS.gene55836:intron 60.0%
TGAAGCCGAGGAGTTTGCCG+AGG - chr4.3:4175435-4175454 MS.gene55836:intron 60.0%
TGGGGAGGCTGCGAAGAATC+TGG - chr4.3:4173374-4173393 MS.gene55836:CDS 60.0%
TGGTGCATCAGGGGAAGGAG+AGG - chr4.3:4175735-4175754 MS.gene55836:CDS 60.0%
! AGGGCAGAAGACAAGGGCAC+AGG - chr4.3:4175340-4175359 MS.gene55836:intron 60.0%
! GACCAAGGTGTTCAGCCCTG+AGG - chr4.3:4173654-4173673 MS.gene55836:CDS 60.0%
!! GCCTTTGGTGCTGCAGTGCA+AGG - chr4.3:4174648-4174667 MS.gene55836:CDS 60.0%
AAAGGGACGCCTGAGCCAGG+AGG - chr4.3:4175393-4175412 MS.gene55836:intron 65.0%
AGGCAGGCCACCAAGGATGC+CGG - chr4.3:4173887-4173906 MS.gene55836:CDS 65.0%
AGGTCAGGTGGAGCTCCAGG+TGG - chr4.3:4175715-4175734 MS.gene55836:intron 65.0%
CAGAGGTCAGGTGGAGCTCC+AGG - chr4.3:4175712-4175731 MS.gene55836:intron 65.0%
CCAGGTGGTGCATCAGGGGA+AGG - chr4.3:4175730-4175749 MS.gene55836:intron 65.0%
CCGGATGGTTCGTGAAGCCG+AGG - chr4.3:4175423-4175442 MS.gene55836:intron 65.0%
CCTTCCCCTGATGCACCACC+TGG + chr4.3:4175733-4175752 None:intergenic 65.0%
CTGGAGCTCCACCTGACCTC+TGG + chr4.3:4175714-4175733 None:intergenic 65.0%
GATGCCGTGGTCACTGTCCC+AGG - chr4.3:4173745-4173764 MS.gene55836:CDS 65.0%
GGAGCTCCAGGTGGTGCATC+AGG - chr4.3:4175724-4175743 MS.gene55836:intron 65.0%
TGCTCAGAGGCAGGCCACCA+AGG - chr4.3:4173880-4173899 MS.gene55836:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 4172447 4175789 4172447 ID=MS.gene55836
chr4.3 mRNA 4172447 4175789 4172447 ID=MS.gene55836.t1;Parent=MS.gene55836
chr4.3 exon 4175735 4175789 4175735 ID=MS.gene55836.t1.exon1;Parent=MS.gene55836.t1
chr4.3 CDS 4175735 4175789 4175735 ID=cds.MS.gene55836.t1;Parent=MS.gene55836.t1
chr4.3 exon 4174785 4175055 4174785 ID=MS.gene55836.t1.exon2;Parent=MS.gene55836.t1
chr4.3 CDS 4174785 4175055 4174785 ID=cds.MS.gene55836.t1;Parent=MS.gene55836.t1
chr4.3 exon 4174470 4174684 4174470 ID=MS.gene55836.t1.exon3;Parent=MS.gene55836.t1
chr4.3 CDS 4174470 4174684 4174470 ID=cds.MS.gene55836.t1;Parent=MS.gene55836.t1
chr4.3 exon 4174127 4174369 4174127 ID=MS.gene55836.t1.exon4;Parent=MS.gene55836.t1
chr4.3 CDS 4174127 4174369 4174127 ID=cds.MS.gene55836.t1;Parent=MS.gene55836.t1
chr4.3 exon 4173528 4174007 4173528 ID=MS.gene55836.t1.exon5;Parent=MS.gene55836.t1
chr4.3 CDS 4173528 4174007 4173528 ID=cds.MS.gene55836.t1;Parent=MS.gene55836.t1
chr4.3 exon 4173253 4173407 4173253 ID=MS.gene55836.t1.exon6;Parent=MS.gene55836.t1
chr4.3 CDS 4173253 4173407 4173253 ID=cds.MS.gene55836.t1;Parent=MS.gene55836.t1
chr4.3 exon 4173055 4173137 4173055 ID=MS.gene55836.t1.exon7;Parent=MS.gene55836.t1
chr4.3 CDS 4173055 4173137 4173055 ID=cds.MS.gene55836.t1;Parent=MS.gene55836.t1
chr4.3 exon 4172447 4172954 4172447 ID=MS.gene55836.t1.exon8;Parent=MS.gene55836.t1
chr4.3 CDS 4172447 4172954 4172447 ID=cds.MS.gene55836.t1;Parent=MS.gene55836.t1
Gene Sequence

>MS.gene55836

ATGGCTCGCTCTTCTTCTTGCGGGTCTCTGTTTCTTCTCACCATCATCTCCTTAGGTAATTATTACATATCTCACTATCTTCTCTTTATCACTATTCAGATCTTGTTCACCTTTTTTTCTCATTGCTTTTGTTGTTTTAGATCTTTGATTTTATGGATCTGATTAGATCGAGATCTTAACCCTACTTGCATCACATTCTAATTAGTTGTTATTATTATTAAGTAGTTAGTATCAATGAGTAATAGTTTTAATATGCATCTATGCAATCTGCATCTAAGAAACTCAATCGAAAGTGTTTAGTTATTGTTTTGTTTTGAATTTTGTGGAACTGTTATTGTTATGTGTTATTGATTTTCTTATTGCCTTTTAAAGACTGTTAATTAATACAATTACGCGCCGGTTTCTTTGAATCTTAGAAGAAGATGCCAATTAGACCTTTTTATTTGTTTGGATTATCAGTTTTCATGTACAAACAAATGTAATTAATTACATGCTTACTAGTGATTTATTTTACTGGCTTCAAATGGATACATTTTTTTTAATACTCTTGCTTTGATAGCACCATAATCATGTTTTTTCCCGTTTAAGGTTCTATTTGTAATGTTGCCTTTAAATAGTTGATTTATGTTGTTTTCGGGTAATGCTTTTATGGGATGTGATTACATGGTTTGGTTTGACACCGATTTAAATGTTTTGAGTTTTTGTCGTTATAATATTGCGATGGTTTATTGCAGGATGTCTATTTGCAACATCTGCTGCAAAAGAGGAAGGGACCACCAAGTTAGGGACTGTTATTGGGATAGATCTTGGAACAACATATTCATGTGTTGGTGTTTACAAGAACGGACATGTTGAAATCATAGCCAACGACCAAGGAAATCGTATCACACCATCATGGGTTTCTTTCACCGACGATGAGAGATTGATTGGGGAGGCTGCGAAGAATCTGGCAGCTGTCAACCCTGAAAGGACCATCTTTGATGTCAAGAGACTTATCGGAAGAAAGTAAGACATCATTATATATGTTTGCTGTTTATAATGACTAATGATTTGTTATAATTTGATGTAATGGGATCAGTGTTGACTGAGTTGCTTCTTTCTTCAGATTTGAGGATAAGGAAGTTCAAAGAGACATGAAGCTTGTTCCTTACAAGATTGTCAACAAGGATGGAAAACCATACATTCAGGTCAGAGTAAAGGATGGTGAGACCAAGGTGTTCAGCCCTGAGGAAGTCAGTGCCATGATTCTGACTAAGATGAAGGAAACCGCTGAAGCATTCCTTGGCAAGACTATTCGTGATGCCGTGGTCACTGTCCCAGGTGAATTGGTGAATTACAACTTGTTCCTCATGCAATTTGGTTACTTTCTTCCCCATTTTGTCTTCATTTTAACATTTCTGGTCTTCTTTTGAATATACAGCTTACTTCAATGATGCTCAGAGGCAGGCCACCAAGGATGCCGGTGTCATTGCTGGTTTGAACGTGGCTAGAATCATTAATGAACCCACCGCTGCTGCCATTGCTTATGGATTGGACAAGAAAGGTGGAGAGAAGAACATTCTTGTCTTTGATCTTGGAGGTGGAACTTTTGATGTCAGTATCTTGACAATTGACAATGGTGTTTTTGAGGTTCTTTCTACAAACGGAGATACCCATCTTGGAGGTGAGTACTTATATATGTAAAAGAGAAAGAATAAGATTAAATTAAGACAAATTCTACTTGTAAAATTTTACTTCTGTTGTTATTGCTTGCCAAGTGCTAACTCTTCAATTGTTTACCAGGTGAGGACTTTGATCAGAGAATAATGGAGTACTTCATTAAATTGATCAAGAAAAAGCATAGCAAGGATATTAGCAAGGACAACAGAGCACTTGGAAAGCTGAGGAGGGAGAGTGAGCGTGCCAAGAGAGCTCTTAGTAGCCAGCACCAAGTCCGTGTGGAAATTGAGTCACTTTTTGATGGCGTTGATTTCTCTGAGCCACTTACCCGTGCTCGATTTGAAGAGTTGAACAATGACTTGTTCCGGAAGACAATGGGACCTGTGAAGAAGGCAATGGACGATGCTGGATTACAGAAGAATCAAATTGATGAGATTGTTCTTGTTGGTGGAAGCACAAGGATTCCAAAGGTACAACAACTTTTGAAGGATTACTTTGATGGAAAGGAACCAAACAAGGGGGTCAACCCTGATGAAGCAGTTGCCTTTGGTGCTGCAGTGCAAGGAAGCATTTTGAGTGGGGAGGGTGGTGAAGAAACCAAAGGTACCATTATAGTCTATACTCTAGCCTTTCAATTGCATTAGGTAGCTATTATTTGTTATTGATGCAAGTAGGTTTCCTAGTATTACACTCTCTCATTGTTGTGCTATTCTGTGTATCCAGATATCCTTCTCTTGGATGTTGCACCTCTTACCCTTGGAATTGAAACTGTTGGAGGAGTGATGACAAAGTTGATTCCTAGAAACACTGTCATCCCCACCAAAAAATCCCAGGTGTTTACCACCTACCAGGATCAGCAAACAACTGTTTCTATTCAGGTACTGTACCATTATTCCACTGCATATTGCTAGGACATTTTCCTTCTAAATACAATATTGTGTAATGAGGGGTGTTGTACTCAACCGGGGTGTTGTCTATTTTTATTATGAATAGGTGTTTGAAGGTGAGAGGAGTCTCACAAAGGATTGCCGTCTTCTCGGGAACTTTGATTTGTCTGGAATCCCACCAGCTCCAAGGTTTGTTTTGTGATATCATAATGTCTTCTATGAACTTTCTCTATTGGTGTTTGTATTCTAATTAATTGATTAATCAATTTTTCTTGTGGTAATTGAACAGAGGTACCCCTCAAATTGAAGTGACCTTTGAAGTAGATGCAAACGGTATTCTAAATGTTAGGGCAGAAGACAAGGGCACAGGTAAATCAGAAAAGATCACCATTACAAATGAAAAGGGACGCCTGAGCCAGGAGGAAATTGACCGGATGGTTCGTGAAGCCGAGGAGTTTGCCGAGGAAGACAAGAAAGTGAAGGAAAGAATTGATGCTCGGAATGCTCTTGAAACCTATGTCTACAACATGAAAAACCAAATCAGTGACAAGGACAAACTTGCTGACAAGTTGGAATCAGATGAAAAGGAAAAAATTGAGGCTGCCGTGAAAGAAGCACTTGAATGGCTGGATGACAACCAAACTGTTGAGAAAGAAGAGTTTGAAGAGAAGCTTAAAGAAGTTGAAGCCGTTTGCAACCCAATTATCACTGCTGTTTACCAGAGGTCAGGTGGAGCTCCAGGTGGTGCATCAGGGGAAGGAGAGGATGAAGATGAAGACTCTCGCGACGAGCTCTAG
Protein sequence

>MS.gene55836.t1

MARSSSCGSLFLLTIISLGCLFATSAAKEEGTTKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVSFTDDERLIGEAAKNLAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVRVKDGETKVFSPEEVSAMILTKMKETAEAFLGKTIRDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRIMEYFIKLIKKKHSKDISKDNRALGKLRRESERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAFGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGNFDLSGIPPAPRGTPQIEVTFEVDANGILNVRAEDKGTGKSEKITITNEKGRLSQEEIDRMVREAEEFAEEDKKVKERIDARNALETYVYNMKNQISDKDKLADKLESDEKEKIEAAVKEALEWLDDNQTVEKEEFEEKLKEVEAVCNPIITAVYQRSGGAPGGASGEGEDEDEDSRDEL