AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene67231

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67231.t1 MTR_8g088730 98.932 562 6 0 7 568 28 589 0.0 1149
MS.gene67231.t1 MTR_2g006300 90.569 562 51 1 7 568 24 583 0.0 981
MS.gene67231.t1 MTR_5g077170 41.259 572 318 7 7 568 28 591 7.71e-160 469
MS.gene67231.t1 MTR_6g074910 39.825 570 327 6 7 568 27 588 1.64e-150 445
MS.gene67231.t1 MTR_8g016270 33.712 617 342 9 7 568 44 648 5.71e-115 355
MS.gene67231.t1 MTR_1g014080 33.387 617 344 9 7 568 33 637 1.29e-111 347
MS.gene67231.t1 MTR_4g053270 34.669 574 347 10 8 568 31 589 4.44e-107 333
MS.gene67231.t1 MTR_3g105950 33.062 614 344 9 10 568 35 636 1.38e-106 333
MS.gene67231.t1 MTR_0204s0010 36.967 422 248 9 155 568 37 448 9.62e-78 253
MS.gene67231.t1 MTR_5g098730 30.490 633 357 18 8 568 44 665 9.20e-75 251
MS.gene67231.t1 MTR_3g082140 29.968 634 359 19 8 568 38 659 7.80e-70 237
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67231.t1 AT1G10950 88.434 562 63 1 7 568 30 589 0.0 976
MS.gene67231.t1 AT5G37310 41.289 574 314 9 7 568 31 593 4.91e-154 454
MS.gene67231.t1 AT5G37310 41.289 574 314 9 7 568 31 593 4.91e-154 454
MS.gene67231.t1 AT2G01970 40.630 571 322 7 7 568 30 592 9.10e-154 454
MS.gene67231.t1 AT1G14670 41.506 571 317 7 7 568 30 592 4.47e-150 444
MS.gene67231.t1 AT1G08350 36.649 573 341 9 7 568 28 589 3.04e-126 383
MS.gene67231.t1 AT1G08350 36.649 573 341 9 7 568 28 589 3.04e-126 383
MS.gene67231.t1 AT3G13772 34.032 620 336 12 7 568 37 641 2.24e-115 357
MS.gene67231.t1 AT1G55130 33.712 617 342 12 7 568 33 637 8.93e-113 350
MS.gene67231.t1 AT2G24170 33.926 619 338 13 7 568 33 637 5.38e-108 337
MS.gene67231.t1 AT1G08350 36.000 525 305 9 7 520 28 532 3.31e-107 332
MS.gene67231.t1 AT1G08350 35.078 516 316 8 64 568 1 508 1.11e-106 330
MS.gene67231.t1 AT5G25100 32.045 621 350 9 7 568 37 644 1.00e-105 332
MS.gene67231.t1 AT5G25100 32.305 616 345 9 12 568 49 651 5.71e-105 330
MS.gene67231.t1 AT5G10840 32.039 618 352 9 7 568 43 648 2.61e-104 328
MS.gene67231.t1 AT5G35160 35.181 469 280 12 109 568 177 630 3.89e-71 240
MS.gene67231.t1 AT5G35160 35.181 469 280 12 109 568 205 658 9.24e-71 240
MS.gene67231.t1 AT5G35160 35.181 469 280 12 109 568 205 658 9.24e-71 240
MS.gene67231.t1 AT5G35160 35.181 469 280 12 109 568 205 658 9.24e-71 240
MS.gene67231.t1 AT4G12650 30.492 610 342 16 31 568 53 652 1.07e-70 239
MS.gene67231.t1 AT2G24170 30.896 424 223 12 8 374 34 444 6.32e-52 184

Find 141 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGTGGTCTTGGTGAGGTTC+TGG 0.126257 4.2:+12590056 MS.gene67231:CDS
TTCCAAACCAGCTTCTATTT+TGG 0.163890 4.2:+12594052 MS.gene67231:CDS
TCTTTCCCTCTTGCACTTCT+TGG 0.167961 4.2:+12593433 MS.gene67231:CDS
AACACTATTGCTATATTCTA+TGG 0.173192 4.2:+12593349 MS.gene67231:CDS
TTTACACGACATGGATTATT+TGG 0.174871 4.2:-12593487 None:intergenic
GCTCTCACATCGTTCATTTC+TGG 0.180300 4.2:+12593104 MS.gene67231:CDS
GGTTCTTCTTGTCATCTTAC+TGG 0.189220 4.2:+12592826 MS.gene67231:CDS
GAATATAGCAATAGTGTTTA+AGG 0.196614 4.2:-12593344 None:intergenic
GTCATCTTACTGGCTATTAT+TGG 0.221951 4.2:+12592836 MS.gene67231:CDS
CCATTATCGCTATGCTTATC+AGG 0.233882 4.2:-12592017 None:intergenic
AGAAACATCAAGTGTGATTA+AGG 0.235735 4.2:+12594295 MS.gene67231:CDS
ATGATGGTCATCTTCCTTAC+TGG 0.240228 4.2:+12592490 MS.gene67231:CDS
ATTATTGGGATGTTGTATAT+TGG 0.240380 4.2:+12592851 MS.gene67231:CDS
TGTTTCTTGTGGATTGTTAT+AGG 0.255200 4.2:-12589971 None:intergenic
CCATTCATGTGCTTTGGAAT+TGG 0.255297 4.2:+12593316 MS.gene67231:CDS
TTAGGAACTTGATCTCAATT+TGG 0.256416 4.2:-12590101 None:intergenic
TTTCCTGCCTCCACAGGCTT+TGG 0.257862 4.2:-12592211 None:intergenic
TTCCTGCCTCCACAGGCTTT+GGG 0.275232 4.2:-12592210 None:intergenic
GATCCTTCTCACAAACAAAT+TGG 0.295137 4.2:-12594269 None:intergenic
GTTCCTACTAATATCACTTT+TGG 0.301532 4.2:+12592265 MS.gene67231:CDS
TTATTCCCATTCATGTGCTT+TGG 0.303113 4.2:+12593310 MS.gene67231:CDS
TTATTGGGATGTTGTATATT+GGG 0.315812 4.2:+12592852 MS.gene67231:CDS
GTACTAGATGGGTGGCAAAA+TGG 0.317512 4.2:-12590012 None:intergenic
CATCATGAAAGAGTTGAAAA+TGG 0.317773 4.2:-12592473 None:intergenic
CCTGATAAGCATAGCGATAA+TGG 0.322031 4.2:+12592017 MS.gene67231:CDS
TCATCTTACTGGCTATTATT+GGG 0.322850 4.2:+12592837 MS.gene67231:CDS
GGTGGTCTTGGTGAGGTTCT+GGG 0.343914 4.2:+12590057 MS.gene67231:CDS
TTGTTCACCCAAAGGTTAAC+AGG 0.344271 4.2:-12589940 None:intergenic
GTACAGTTGTTGGAAGAAAC+TGG 0.348979 4.2:+12593455 MS.gene67231:CDS
GTTTCTTGTGGATTGTTATA+GGG 0.350260 4.2:-12589970 None:intergenic
ATTTGACATATTCTGTCAAA+TGG 0.363074 4.2:+12592242 MS.gene67231:CDS
CTTCTACTGCTGCACACAAA+TGG 0.372102 4.2:+12590034 MS.gene67231:CDS
TTCTACTGCTGCACACAAAT+GGG 0.377902 4.2:+12590035 MS.gene67231:CDS
TGCTCGGGAAGATGATGATT+TGG 0.381303 4.2:+12592564 MS.gene67231:CDS
TACTAGATGGGTGGCAAAAT+GGG 0.386783 4.2:-12590011 None:intergenic
ATGCAATAGAGAATAATTAC+TGG 0.388926 4.2:+12590273 MS.gene67231:CDS
GGGATGATCCTGTTAACCTT+TGG 0.390319 4.2:+12589932 MS.gene67231:CDS
GCACTTCTTGGTACAGTTGT+TGG 0.394046 4.2:+12593445 MS.gene67231:CDS
GGATGATCCTGTTAACCTTT+GGG 0.395177 4.2:+12589933 MS.gene67231:CDS
TCTCTAGCTGCTATCCCATT+TGG 0.398262 4.2:+12593373 MS.gene67231:CDS
ATCCAAAATAGAAGCTGGTT+TGG 0.403813 4.2:-12594054 None:intergenic
ACAACCACCATTGTGCCAAA+TGG 0.406323 4.2:-12593388 None:intergenic
ACCTTCAGTGGTTTCTCTGA+TGG 0.407419 4.2:+12593552 MS.gene67231:CDS
TCATTTCTGGTTATGTGAGT+GGG 0.411230 4.2:+12593117 MS.gene67231:CDS
TGTGTATGGCTTTATGCTAC+TGG 0.413075 4.2:+12593850 MS.gene67231:CDS
TGTGGAGGCAGGAAAACATT+TGG 0.417528 4.2:+12592219 MS.gene67231:CDS
AGGTGCTCAGCTAGCACTGC+TGG 0.423568 4.2:+12592805 MS.gene67231:CDS
TTTCTGTCTCATAGATTCAC+TGG 0.423593 4.2:+12592446 MS.gene67231:intron
GGTCATCTTCCTTACTGGAT+TGG 0.423761 4.2:+12592495 MS.gene67231:CDS
TTCAGGAAATGTGGATAAAA+CGG 0.424085 4.2:+12590202 MS.gene67231:intron
ATGGGAGGACTGCTCCCCTT+TGG 0.425866 4.2:+12593571 MS.gene67231:CDS
CAACCACCATTGTGCCAAAT+GGG 0.431622 4.2:-12593387 None:intergenic
TTCAGATGATCTTCCTTTGT+GGG 0.433913 4.2:+12591880 MS.gene67231:intron
TTTAATGTTTAAGGATATGT+TGG 0.444357 4.2:+12591984 MS.gene67231:intron
CCAATTCCAAAGCACATGAA+TGG 0.445296 4.2:-12593316 None:intergenic
GTTATTCTTTCAGCTGTAGT+TGG 0.446425 4.2:+12592779 MS.gene67231:CDS
CTTTCAGCTGTAGTTGGCAC+AGG 0.449731 4.2:+12592785 MS.gene67231:CDS
GGGGATGTACTCACGAAATG+GGG 0.453033 4.2:+12593139 MS.gene67231:CDS
CTGTTTGTGTGACAATTGTC+GGG 0.453788 4.2:+12593897 MS.gene67231:CDS
CTATCCTTTCTTTGAGCACC+AGG 0.454485 4.2:+12592312 MS.gene67231:CDS
GCAGCAGTAGAAGTACTAGA+TGG 0.454588 4.2:-12590024 None:intergenic
CCTTCAGTGGTTTCTCTGAT+GGG 0.459448 4.2:+12593553 MS.gene67231:CDS
TACCACTTCTTCTCAGGAAT+GGG 0.459819 4.2:-12593523 None:intergenic
GCACACAAATGGGGTGGTCT+TGG 0.464078 4.2:+12590045 MS.gene67231:CDS
TGTTAAATACAATAATGATC+AGG 0.464103 4.2:+12592073 MS.gene67231:CDS
TTTGCATGTTAGGTAAAAGC+TGG 0.464576 4.2:+12593260 MS.gene67231:intron
AGATGATGATTTGGAATCTC+TGG 0.464901 4.2:+12592573 MS.gene67231:CDS
AACCTTTGGGTGAACAAAGT+TGG 0.465024 4.2:+12589946 MS.gene67231:CDS
GTCCCAAAGCCTGTGGAGGC+AGG 0.466032 4.2:+12592208 MS.gene67231:CDS
TTCAATAAATATGCTGCCAA+AGG 0.469394 4.2:-12593587 None:intergenic
ATTCAGATGATCTTCCTTTG+TGG 0.469698 4.2:+12591879 MS.gene67231:intron
TTTGACATATTCTGTCAAAT+GGG 0.471266 4.2:+12592243 MS.gene67231:CDS
ACTGTTTGTGTGACAATTGT+CGG 0.474263 4.2:+12593896 MS.gene67231:CDS
AGAGACGTTAGTGAAGAATC+TGG 0.475065 4.2:+12592710 MS.gene67231:CDS
GTGAGGTACCACTTCTTCTC+AGG 0.480937 4.2:-12593529 None:intergenic
TACGTGAAGACAAAGATGTC+AGG 0.484733 4.2:+12594025 MS.gene67231:CDS
CGTCCAAAAGTGATATTAGT+AGG 0.488108 4.2:-12592268 None:intergenic
CAATTCCAAAGCACATGAAT+GGG 0.488664 4.2:-12593315 None:intergenic
TCAATAAATATGCTGCCAAA+GGG 0.491052 4.2:-12593586 None:intergenic
TAAAGAAGCTGTAAGGATCA+TGG 0.491490 4.2:-12593290 None:intergenic
GTTCCAATTTGTTTGTGAGA+AGG 0.502663 4.2:+12594266 MS.gene67231:CDS
CTTGGACTAGGAATTCTTTG+CGG 0.503085 4.2:+12594094 MS.gene67231:CDS
TTCATTTCTGGTTATGTGAG+TGG 0.508011 4.2:+12593116 MS.gene67231:CDS
TACTCTTATTTCAGGAAATG+TGG 0.511703 4.2:+12590193 MS.gene67231:intron
ACACTATTGCTATATTCTAT+GGG 0.513070 4.2:+12593350 MS.gene67231:CDS
TAATAATTGTATGTTTCTTG+TGG 0.516387 4.2:-12589982 None:intergenic
ATGACTATGCAAAATATGCT+CGG 0.518614 4.2:+12592548 MS.gene67231:CDS
TAATATTCTTGTGTGTGTAA+AGG 0.519006 4.2:-12592049 None:intergenic
TACTTCCTTCTGGAATTACA+AGG 0.524010 4.2:+12593624 MS.gene67231:CDS
ATTTCTGGTTATGTGAGTGG+GGG 0.527049 4.2:+12593119 MS.gene67231:CDS
GGGATGTACTCACGAAATGG+GGG 0.528046 4.2:+12593140 MS.gene67231:CDS
TGTACCTGGTGCTCAAAGAA+AGG 0.529220 4.2:-12592316 None:intergenic
TTGCATCATCAAGATCCATC+TGG 0.532224 4.2:-12590232 None:intergenic
ACGCCGCTTTGATGTCTACC+TGG 0.532449 4.2:+12592288 MS.gene67231:CDS
TGACTATGCAAAATATGCTC+GGG 0.538507 4.2:+12592549 MS.gene67231:CDS
TGCTATCCCATTTGGCACAA+TGG 0.538975 4.2:+12593381 MS.gene67231:CDS
CTGAGAACTACCACTGGCAA+TGG 0.539560 4.2:+12593939 MS.gene67231:CDS
GTACCACTTCTTCTCAGGAA+TGG 0.539757 4.2:-12593524 None:intergenic
ATGGGAATAAAGAAGCTGTA+AGG 0.542673 4.2:-12593297 None:intergenic
AGTGTATCCAAAATAGAAGC+TGG 0.550003 4.2:-12594059 None:intergenic
TTCTTCTCAGGAATGGGACG+AGG 0.550039 4.2:-12593517 None:intergenic
TTCCAATGTGCAGGAGCTGT+AGG 0.552065 4.2:+12594235 MS.gene67231:intron
CATTTCTGGTTATGTGAGTG+GGG 0.564790 4.2:+12593118 MS.gene67231:CDS
ACGTTAGTGAAGAATCTGGC+TGG 0.566054 4.2:+12592714 MS.gene67231:CDS
AAACAGGTGTACTATGTGTA+TGG 0.567409 4.2:+12593836 MS.gene67231:intron
GTCCAACTTTGTTCACCCAA+AGG 0.569033 4.2:-12589948 None:intergenic
TTTCTGGTTATGTGAGTGGG+GGG 0.572386 4.2:+12593120 MS.gene67231:CDS
GTCCCATTCCTGAGAAGAAG+TGG 0.575509 4.2:+12593521 MS.gene67231:CDS
TCAGTGGTTTCTCTGATGGG+AGG 0.576830 4.2:+12593556 MS.gene67231:CDS
GTGGTACCTCACACCTTCAG+TGG 0.581121 4.2:+12593540 MS.gene67231:CDS
CAGCAGTAGAAGTACTAGAT+GGG 0.584920 4.2:-12590023 None:intergenic
GAGAGCATAACAAACAATGA+AGG 0.589483 4.2:-12593087 None:intergenic
TCAGATGATCTTCCTTTGTG+GGG 0.590359 4.2:+12591881 MS.gene67231:intron
TCATTGATACCAATCCAGTA+AGG 0.604552 4.2:-12592504 None:intergenic
GCTCAAAGAAAGGATAGTCC+AGG 0.607444 4.2:-12592306 None:intergenic
ATACACATAAACTGATGTTG+AGG 0.610091 4.2:-12593981 None:intergenic
GTTCACCTTGTAATTCCAGA+AGG 0.615446 4.2:-12593629 None:intergenic
GATGGATCTTGATGATGCAA+AGG 0.617807 4.2:+12590235 MS.gene67231:CDS
ACGTGAAGACAAAGATGTCA+GGG 0.618435 4.2:+12594026 MS.gene67231:CDS
TATCCCATTTGGCACAATGG+TGG 0.629550 4.2:+12593384 MS.gene67231:CDS
TCTACTGCTGCACACAAATG+GGG 0.631157 4.2:+12590036 MS.gene67231:CDS
CAAATGGGGTGGTCTTGGTG+AGG 0.631751 4.2:+12590050 MS.gene67231:CDS
TCAAGATGTCCCAAAGCCTG+TGG 0.633218 4.2:+12592201 MS.gene67231:CDS
AGATGTCCCAAAGCCTGTGG+AGG 0.635079 4.2:+12592204 MS.gene67231:CDS
GGTCTTGGTGAGGTTCTGGG+TGG 0.636779 4.2:+12590060 MS.gene67231:CDS
ACTGTACCAAGAAGTGCAAG+AGG 0.641941 4.2:-12593439 None:intergenic
TAAATGCTGAGAACTACCAC+TGG 0.646179 4.2:+12593933 MS.gene67231:CDS
CCCATCAGAGAAACCACTGA+AGG 0.648823 4.2:-12593553 None:intergenic
CAGTAGAAGTACTAGATGGG+TGG 0.656556 4.2:-12590020 None:intergenic
CAATAAATATGCTGCCAAAG+GGG 0.656961 4.2:-12593585 None:intergenic
GAAAGAATAACTAAATAGCG+AGG 0.658895 4.2:-12592767 None:intergenic
TGTCACACAAACAGTAACGA+TGG 0.672279 4.2:-12593888 None:intergenic
ACTGCTGCACACAAATGGGG+TGG 0.678345 4.2:+12590039 MS.gene67231:CDS
AGAAAGACGTCCATTGCCAG+TGG 0.681900 4.2:-12593949 None:intergenic
CTGTACCAAGAAGTGCAAGA+GGG 0.682888 4.2:-12593438 None:intergenic
TCTGGCTGGAAACTTGTGCA+CGG 0.685297 4.2:+12592728 MS.gene67231:CDS
GAGAAACCACTGAAGGTGTG+AGG 0.685299 4.2:-12593546 None:intergenic
GTTCTAGGCATACCCCACAA+AGG 0.694278 4.2:-12591893 None:intergenic
AGAATAACTAAATAGCGAGG+AGG 0.710040 4.2:-12592764 None:intergenic
GTTGTTGGAAGAAACTGGAG+TGG 0.756109 4.2:+12593460 MS.gene67231:CDS
AGTCCAGGTAGACATCAAAG+CGG 0.788919 4.2:-12592291 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTATTTTTAAAAAAAA+TGG - chr4.2:12592344-12592363 None:intergenic 0.0%
!! TGTAAAATAATTCATTCAAT+TGG - chr4.2:12590602-12590621 None:intergenic 15.0%
!!! ATTTTATCTGTTCTTATTTA+TGG + chr4.2:12592610-12592629 MS.gene67231:intron 15.0%
!!! TTAGAAAAACATAATTTTCT+AGG - chr4.2:12592653-12592672 None:intergenic 15.0%
!! AAGAAAAATGACTTAGATAA+TGG + chr4.2:12593731-12593750 MS.gene67231:intron 20.0%
!! TAAATAATATTTCCTTTCAG+AGG + chr4.2:12590546-12590565 MS.gene67231:intron 20.0%
!! TAATAATTGTATGTTTCTTG+TGG - chr4.2:12589985-12590004 None:intergenic 20.0%
!! TCAAAACAAATAAATTATCG+AGG + chr4.2:12590877-12590896 MS.gene67231:intron 20.0%
!! TGAAAACTAATAAGTTATCT+AGG - chr4.2:12591111-12591130 None:intergenic 20.0%
!! TGTTAAATACAATAATGATC+AGG + chr4.2:12592073-12592092 MS.gene67231:CDS 20.0%
!! TTGATTATAATAGGACATTA+TGG + chr4.2:12591199-12591218 MS.gene67231:intron 20.0%
!! TTTAATGTTTAAGGATATGT+TGG + chr4.2:12591984-12592003 MS.gene67231:intron 20.0%
!!! ACTATTTTTATTTGCATGTT+AGG + chr4.2:12593250-12593269 MS.gene67231:intron 20.0%
!!! ATCAAATTCCTTTTATTTGT+TGG + chr4.2:12593677-12593696 MS.gene67231:intron 20.0%
!!! TAAATTTAAAACAAGGAATG+AGG - chr4.2:12591755-12591774 None:intergenic 20.0%
!!! TAAGTCATTTTTCTTGATAA+AGG - chr4.2:12593726-12593745 None:intergenic 20.0%
!!! TTATTTTATTGCAGTATCAA+CGG + chr4.2:12589911-12589930 MS.gene67231:CDS 20.0%
!!! TTGAAGTTTTTTTTTTTGTG+TGG + chr4.2:12593174-12593193 MS.gene67231:intron 20.0%
! AAATCCAATCCAATATTGTT+TGG + chr4.2:12591664-12591683 MS.gene67231:intron 25.0%
! AACACTATTGCTATATTCTA+TGG + chr4.2:12593349-12593368 MS.gene67231:CDS 25.0%
! ACAATTAAGAGAATGTTAGT+TGG - chr4.2:12593040-12593059 None:intergenic 25.0%
! ACACTATTGCTATATTCTAT+GGG + chr4.2:12593350-12593369 MS.gene67231:CDS 25.0%
! ACATCTAATCCTATCTTATA+AGG + chr4.2:12592111-12592130 MS.gene67231:intron 25.0%
! ATAGGATATCTTATCATATG+CGG + chr4.2:12594159-12594178 MS.gene67231:intron 25.0%
! ATCTAATCCTATCTTATAAG+GGG + chr4.2:12592113-12592132 MS.gene67231:intron 25.0%
! ATGCAATAGAGAATAATTAC+TGG + chr4.2:12590273-12590292 MS.gene67231:CDS 25.0%
! ATTACCAAACAATATTGGAT+TGG - chr4.2:12591671-12591690 None:intergenic 25.0%
! ATTATTGGGATGTTGTATAT+TGG + chr4.2:12592851-12592870 MS.gene67231:CDS 25.0%
! ATTATTTACACCAACTTCTA+TGG - chr4.2:12590534-12590553 None:intergenic 25.0%
! ATTTGACATATTCTGTCAAA+TGG + chr4.2:12592242-12592261 MS.gene67231:CDS 25.0%
! CAGTTTCAAGACTTATTTAT+GGG + chr4.2:12590745-12590764 MS.gene67231:intron 25.0%
! CATCAATTACCAAACAATAT+TGG - chr4.2:12591676-12591695 None:intergenic 25.0%
! CATCTAATCCTATCTTATAA+GGG + chr4.2:12592112-12592131 MS.gene67231:intron 25.0%
! CTATTATAATCAAATGCAGT+CGG - chr4.2:12591192-12591211 None:intergenic 25.0%
! GAATATAGCAATAGTGTTTA+AGG - chr4.2:12593347-12593366 None:intergenic 25.0%
! TAATATTCTTGTGTGTGTAA+AGG - chr4.2:12592052-12592071 None:intergenic 25.0%
! TACATGATGACATTTATGTA+TGG + chr4.2:12591480-12591499 MS.gene67231:intron 25.0%
! TCAGTTTCAAGACTTATTTA+TGG + chr4.2:12590744-12590763 MS.gene67231:intron 25.0%
! TGACAAAACCAACAAATAAA+AGG - chr4.2:12593688-12593707 None:intergenic 25.0%
! TTATTGGGATGTTGTATATT+GGG + chr4.2:12592852-12592871 MS.gene67231:CDS 25.0%
! TTTGACATATTCTGTCAAAT+GGG + chr4.2:12592243-12592262 MS.gene67231:CDS 25.0%
!! ACATAGAGTATTTGCTTTAA+AGG - chr4.2:12593758-12593777 None:intergenic 25.0%
!! ATGTCTGTACAATAATGTTT+TGG + chr4.2:12591320-12591339 MS.gene67231:intron 25.0%
!! ATTTTGTATTTACTTCCTTC+TGG + chr4.2:12593614-12593633 MS.gene67231:CDS 25.0%
!! CATAGAGTATTTGCTTTAAA+GGG - chr4.2:12593757-12593776 None:intergenic 25.0%
!! TATTTTATTGCAGTATCAAC+GGG + chr4.2:12589912-12589931 MS.gene67231:CDS 25.0%
!! TTAACGAATACTCTTATTTC+AGG + chr4.2:12590185-12590204 MS.gene67231:intron 25.0%
!! TTGATAATTAAAACAAGTCG+TGG - chr4.2:12593662-12593681 None:intergenic 25.0%
!!! ACTGTTCTAGTTTTTTGTAA+TGG + chr4.2:12592978-12592997 MS.gene67231:intron 25.0%
!!! TAAAAAAAATGGATTGTACC+TGG - chr4.2:12592333-12592352 None:intergenic 25.0%
!!! TACTGGTTTGAATTTTTCAT+GGG + chr4.2:12590290-12590309 MS.gene67231:CDS 25.0%
!!! TTACTGGTTTGAATTTTTCA+TGG + chr4.2:12590289-12590308 MS.gene67231:CDS 25.0%
!!! TTTTGTTGTTGTTATTTCTC+TGG + chr4.2:12591830-12591849 MS.gene67231:intron 25.0%
ACAAACTAAGAAACACACAT+CGG + chr4.2:12590477-12590496 MS.gene67231:intron 30.0%
AGAGTATAAACCATAGAAGT+TGG + chr4.2:12590521-12590540 MS.gene67231:intron 30.0%
AGTGAGTTATTCAGCAAAAA+TGG - chr4.2:12591802-12591821 None:intergenic 30.0%
AGTTATTCAGCAAAAATGGA+AGG - chr4.2:12591798-12591817 None:intergenic 30.0%
ATAAGTTATCTAGGAAGTCA+CGG - chr4.2:12591102-12591121 None:intergenic 30.0%
ATACACATAAACTGATGTTG+AGG - chr4.2:12593984-12594003 None:intergenic 30.0%
ATGACTATGCAAAATATGCT+CGG + chr4.2:12592548-12592567 MS.gene67231:CDS 30.0%
ATTCTTGATTCCATACTTCT+CGG - chr4.2:12591614-12591633 None:intergenic 30.0%
CAACGTAAAAATAACAGAAG+CGG + chr4.2:12590441-12590460 MS.gene67231:intron 30.0%
CATCATGAAAGAGTTGAAAA+TGG - chr4.2:12592476-12592495 None:intergenic 30.0%
CGACTGCATTTGATTATAAT+AGG + chr4.2:12591190-12591209 MS.gene67231:intron 30.0%
GAAAGAATAACTAAATAGCG+AGG - chr4.2:12592770-12592789 None:intergenic 30.0%
TATTCTTGATGTTAGTGTAC+TGG - chr4.2:12590414-12590433 None:intergenic 30.0%
TCAATAAATATGCTGCCAAA+GGG - chr4.2:12593589-12593608 None:intergenic 30.0%
TGAGTCAAAAGCAGTTAAAA+TGG + chr4.2:12590801-12590820 MS.gene67231:intron 30.0%
TGTCATAATGTTATGAGTGA+GGG + chr4.2:12591711-12591730 MS.gene67231:intron 30.0%
TGTTATCAACAGTAAGCTAT+CGG - chr4.2:12591410-12591429 None:intergenic 30.0%
TTAGGAACTTGATCTCAATT+TGG - chr4.2:12590104-12590123 None:intergenic 30.0%
TTCAATAAATATGCTGCCAA+AGG - chr4.2:12593590-12593609 None:intergenic 30.0%
TTCAATTATCATGTAGCACA+TGG + chr4.2:12592922-12592941 MS.gene67231:intron 30.0%
TTCAGGAAATGTGGATAAAA+CGG + chr4.2:12590202-12590221 MS.gene67231:intron 30.0%
TTGTCATAATGTTATGAGTG+AGG + chr4.2:12591710-12591729 MS.gene67231:intron 30.0%
! CAAGAGAAGTTTTCATACTT+AGG - chr4.2:12590122-12590141 None:intergenic 30.0%
! CATTTTCAACTCTTTCATGA+TGG + chr4.2:12592474-12592493 MS.gene67231:CDS 30.0%
! GTTCCTACTAATATCACTTT+TGG + chr4.2:12592265-12592284 MS.gene67231:CDS 30.0%
! GTTTCTTGTGGATTGTTATA+GGG - chr4.2:12589973-12589992 None:intergenic 30.0%
! TACACTTTGATGTTTTCTCT+TGG + chr4.2:12594076-12594095 MS.gene67231:CDS 30.0%
! TACTCTTATTTCAGGAAATG+TGG + chr4.2:12590193-12590212 MS.gene67231:intron 30.0%
! TCATCTTACTGGCTATTATT+GGG + chr4.2:12592837-12592856 MS.gene67231:CDS 30.0%
! TGTTTCTTGTGGATTGTTAT+AGG - chr4.2:12589974-12589993 None:intergenic 30.0%
! TTTACACGACATGGATTATT+TGG - chr4.2:12593490-12593509 None:intergenic 30.0%
!! AACTGCTTTTGACTCATAAT+AGG - chr4.2:12590797-12590816 None:intergenic 30.0%
!! ACTGCTTTTGACTCATAATA+GGG - chr4.2:12590796-12590815 None:intergenic 30.0%
!! ATAAGAGTATTCGTTAAAGC+TGG - chr4.2:12590182-12590201 None:intergenic 30.0%
!! ATGTGTGTTTCTTAGTTTGT+AGG - chr4.2:12590477-12590496 None:intergenic 30.0%
!! TTAACTATTCTAGAATGCCT+TGG + chr4.2:12591554-12591573 MS.gene67231:intron 30.0%
AAACAGGTGTACTATGTGTA+TGG + chr4.2:12593836-12593855 MS.gene67231:intron 35.0%
AAACTAAGAAACACACATCG+GGG + chr4.2:12590479-12590498 MS.gene67231:intron 35.0%
AAACTTTCAACCAACAGTTC+AGG - chr4.2:12594212-12594231 None:intergenic 35.0%
AATCTATGAGACAGAAAAGG+AGG - chr4.2:12592443-12592462 None:intergenic 35.0%
ACAATCTTAGAATCAGCATC+AGG + chr4.2:12590619-12590638 MS.gene67231:intron 35.0%
ACCAAATAAAGAGAAAGAGG+CGG - chr4.2:12591918-12591937 None:intergenic 35.0%
AGAATAACTAAATAGCGAGG+AGG - chr4.2:12592767-12592786 None:intergenic 35.0%
AGATATCCTATCACATATGC+AGG - chr4.2:12594150-12594169 None:intergenic 35.0%
AGTGTATCCAAAATAGAAGC+TGG - chr4.2:12594062-12594081 None:intergenic 35.0%
ATCCAAAATAGAAGCTGGTT+TGG - chr4.2:12594057-12594076 None:intergenic 35.0%
ATCCGTGGAGTTTCATATTT+AGG + chr4.2:12592143-12592162 MS.gene67231:intron 35.0%
ATGGGAATAAAGAAGCTGTA+AGG - chr4.2:12593300-12593319 None:intergenic 35.0%
ATTCAGATGATCTTCCTTTG+TGG + chr4.2:12591879-12591898 MS.gene67231:intron 35.0%
CAAACTAAGAAACACACATC+GGG + chr4.2:12590478-12590497 MS.gene67231:intron 35.0%
CAATAAATATGCTGCCAAAG+GGG - chr4.2:12593588-12593607 None:intergenic 35.0%
CAATCTTAGAATCAGCATCA+GGG + chr4.2:12590620-12590639 MS.gene67231:intron 35.0%
CAATTCCAAAGCACATGAAT+GGG - chr4.2:12593318-12593337 None:intergenic 35.0%
CACACCAAATAAAGAGAAAG+AGG - chr4.2:12591921-12591940 None:intergenic 35.0%
CATCTTCTAATCAATCCTAG+AGG + chr4.2:12590684-12590703 MS.gene67231:intron 35.0%
CATTCTCTTAATTGTGTCTC+AGG + chr4.2:12593045-12593064 MS.gene67231:intron 35.0%
CCTATTGATGAATCATTTGC+AGG - chr4.2:12590961-12590980 None:intergenic 35.0%
CCTGCAAATGATTCATCAAT+AGG + chr4.2:12590958-12590977 MS.gene67231:intron 35.0%
CGTCCAAAAGTGATATTAGT+AGG - chr4.2:12592271-12592290 None:intergenic 35.0%
GACCTAAATATGAAACTCCA+CGG - chr4.2:12592148-12592167 None:intergenic 35.0%
GATCCTTCTCACAAACAAAT+TGG - chr4.2:12594272-12594291 None:intergenic 35.0%
GGTTTATACTCTTGCTCAAA+GGG - chr4.2:12590513-12590532 None:intergenic 35.0%
GTCATTGCTTACATGTTTAC+AGG + chr4.2:12592685-12592704 MS.gene67231:intron 35.0%
GTGAATCTATGAGACAGAAA+AGG - chr4.2:12592446-12592465 None:intergenic 35.0%
GTTATTCTTTCAGCTGTAGT+TGG + chr4.2:12592779-12592798 MS.gene67231:CDS 35.0%
TAAAGAAGCTGTAAGGATCA+TGG - chr4.2:12593293-12593312 None:intergenic 35.0%
TATGCCAATGATTCGTCAAT+AGG - chr4.2:12591021-12591040 None:intergenic 35.0%
TCATTGATACCAATCCAGTA+AGG - chr4.2:12592507-12592526 None:intergenic 35.0%
TGACTATGCAAAATATGCTC+GGG + chr4.2:12592549-12592568 MS.gene67231:CDS 35.0%
TGGTTTATACTCTTGCTCAA+AGG - chr4.2:12590514-12590533 None:intergenic 35.0%
TTATTCCCATTCATGTGCTT+TGG + chr4.2:12593310-12593329 MS.gene67231:CDS 35.0%
TTCAGATGATCTTCCTTTGT+GGG + chr4.2:12591880-12591899 MS.gene67231:intron 35.0%
TTTCATCCTGCATATGTGAT+AGG + chr4.2:12594141-12594160 MS.gene67231:intron 35.0%
TTTCTGTCTCATAGATTCAC+TGG + chr4.2:12592446-12592465 MS.gene67231:intron 35.0%
TTTGCATGTTAGGTAAAAGC+TGG + chr4.2:12593260-12593279 MS.gene67231:intron 35.0%
! AAGTTTTTGTTCCAATGTGC+AGG + chr4.2:12594226-12594245 MS.gene67231:intron 35.0%
! AGATGATGATTTGGAATCTC+TGG + chr4.2:12592573-12592592 MS.gene67231:CDS 35.0%
! CCTATCTTATAAGGGGTTTT+GGG + chr4.2:12592120-12592139 MS.gene67231:intron 35.0%
! GAGAGCATAACAAACAATGA+AGG - chr4.2:12593090-12593109 None:intergenic 35.0%
! GGAATAGTTTTTACACGACA+TGG - chr4.2:12593499-12593518 None:intergenic 35.0%
! GTCATCTTACTGGCTATTAT+TGG + chr4.2:12592836-12592855 MS.gene67231:CDS 35.0%
! GTTCCAATTTGTTTGTGAGA+AGG + chr4.2:12594266-12594285 MS.gene67231:CDS 35.0%
! TCCTATCTTATAAGGGGTTT+TGG + chr4.2:12592119-12592138 MS.gene67231:intron 35.0%
! TTCCAAACCAGCTTCTATTT+TGG + chr4.2:12594052-12594071 MS.gene67231:CDS 35.0%
! TTGATGTTTTCTCTTGGACT+AGG + chr4.2:12594082-12594101 MS.gene67231:CDS 35.0%
!! GATAGCTTACTGTTGATAAC+AGG + chr4.2:12591409-12591428 MS.gene67231:intron 35.0%
!! TACTTCCTTCTGGAATTACA+AGG + chr4.2:12593624-12593643 MS.gene67231:CDS 35.0%
!! TCATTTCTGGTTATGTGAGT+GGG + chr4.2:12593117-12593136 MS.gene67231:CDS 35.0%
!! TTCATTTCTGGTTATGTGAG+TGG + chr4.2:12593116-12593135 MS.gene67231:CDS 35.0%
!!! ACAATAATGTTTTGGCCTCT+GGG + chr4.2:12591328-12591347 MS.gene67231:intron 35.0%
!!! GGTGGTTGTTTTTGTCATTT+GGG + chr4.2:12593402-12593421 MS.gene67231:CDS 35.0%
!!! TACAATAATGTTTTGGCCTC+TGG + chr4.2:12591327-12591346 MS.gene67231:intron 35.0%
!!! TGAACTGTTTTAGCATCCAA+TGG + chr4.2:12590908-12590927 MS.gene67231:intron 35.0%
!!! TGGTGGTTGTTTTTGTCATT+TGG + chr4.2:12593401-12593420 MS.gene67231:CDS 35.0%
AACCTTTGGGTGAACAAAGT+TGG + chr4.2:12589946-12589965 MS.gene67231:CDS 40.0%
AATTCTCAGTCACAGAGCTA+AGG - chr4.2:12592415-12592434 None:intergenic 40.0%
ACATGAATGATCTGCACAGA+AGG - chr4.2:12592172-12592191 None:intergenic 40.0%
ACCGCCTCTTTCTCTTTATT+TGG + chr4.2:12591914-12591933 MS.gene67231:intron 40.0%
ACGTGAAGACAAAGATGTCA+GGG + chr4.2:12594026-12594045 MS.gene67231:CDS 40.0%
AGACTAAACAAGCCATGAAG+TGG + chr4.2:12590707-12590726 MS.gene67231:intron 40.0%
AGAGACGTTAGTGAAGAATC+TGG + chr4.2:12592710-12592729 MS.gene67231:CDS 40.0%
AGTACACCTGTTTGTCACAA+AGG - chr4.2:12593829-12593848 None:intergenic 40.0%
AGTTAGCACATGACAACTGA+GGG - chr4.2:12591299-12591318 None:intergenic 40.0%
ATCAGGGATATAGTTACACC+AGG + chr4.2:12591265-12591284 MS.gene67231:intron 40.0%
ATGATGGTCATCTTCCTTAC+TGG + chr4.2:12592490-12592509 MS.gene67231:CDS 40.0%
CATACTCCTTTGACAGACAT+TGG - chr4.2:12591436-12591455 None:intergenic 40.0%
CCAATTCCAAAGCACATGAA+TGG - chr4.2:12593319-12593338 None:intergenic 40.0%
CCATTATCGCTATGCTTATC+AGG - chr4.2:12592020-12592039 None:intergenic 40.0%
CCCAAAACCCCTTATAAGAT+AGG - chr4.2:12592123-12592142 None:intergenic 40.0%
CCTGATAAGCATAGCGATAA+TGG + chr4.2:12592017-12592036 MS.gene67231:CDS 40.0%
GGATGATCCTGTTAACCTTT+GGG + chr4.2:12589933-12589952 MS.gene67231:CDS 40.0%
GGTTCTTCTTGTCATCTTAC+TGG + chr4.2:12592826-12592845 MS.gene67231:CDS 40.0%
GTACAGTTGTTGGAAGAAAC+TGG + chr4.2:12593455-12593474 MS.gene67231:CDS 40.0%
GTTCACCTTGTAATTCCAGA+AGG - chr4.2:12593632-12593651 None:intergenic 40.0%
TAAATGCTGAGAACTACCAC+TGG + chr4.2:12593933-12593952 MS.gene67231:CDS 40.0%
TACCACTTCTTCTCAGGAAT+GGG - chr4.2:12593526-12593545 None:intergenic 40.0%
TACGTGAAGACAAAGATGTC+AGG + chr4.2:12594025-12594044 MS.gene67231:CDS 40.0%
TACTAGATGGGTGGCAAAAT+GGG - chr4.2:12590014-12590033 None:intergenic 40.0%
TCAGATGATCTTCCTTTGTG+GGG + chr4.2:12591881-12591900 MS.gene67231:intron 40.0%
TGCACCTATTGACGAATCAT+TGG + chr4.2:12591014-12591033 MS.gene67231:intron 40.0%
TGGCAGAGAATGAAAAGCAA+TGG - chr4.2:12593020-12593039 None:intergenic 40.0%
TGGCTTCATCATCATACAGT+TGG + chr4.2:12591062-12591081 MS.gene67231:intron 40.0%
TGGTCTTCACTTGAGAATCA+GGG + chr4.2:12591249-12591268 MS.gene67231:intron 40.0%
TTCTACTGCTGCACACAAAT+GGG + chr4.2:12590035-12590054 MS.gene67231:CDS 40.0%
TTGCATCATCAAGATCCATC+TGG - chr4.2:12590235-12590254 None:intergenic 40.0%
TTGTTCACCCAAAGGTTAAC+AGG - chr4.2:12589943-12589962 None:intergenic 40.0%
TTTCCTCCTTTGTGACAAAC+AGG + chr4.2:12593820-12593839 MS.gene67231:intron 40.0%
! CTTGGACTAGGAATTCTTTG+CGG + chr4.2:12594094-12594113 MS.gene67231:CDS 40.0%
! GCTAGCATGAAGTTTTCCTT+AGG + chr4.2:12590388-12590407 MS.gene67231:intron 40.0%
! GCTTTTATCACCTGAACTGT+TGG + chr4.2:12594199-12594218 MS.gene67231:intron 40.0%
! GGAAGTCACGGAACTATTTT+AGG - chr4.2:12591090-12591109 None:intergenic 40.0%
! TAAAACGGTCTTTTGCCAGA+TGG + chr4.2:12590217-12590236 MS.gene67231:CDS 40.0%
! TGATTTGGAATCTCTGGTGA+TGG + chr4.2:12592579-12592598 MS.gene67231:intron 40.0%
! TGTATGATGATGAAGCCAGA+AGG - chr4.2:12591060-12591079 None:intergenic 40.0%
! TTGTGCACGGTGATGTTTTT+CGG + chr4.2:12592741-12592760 MS.gene67231:CDS 40.0%
!! ATTTCTGGTTATGTGAGTGG+GGG + chr4.2:12593119-12593138 MS.gene67231:CDS 40.0%
!! CAGCAGTAGAAGTACTAGAT+GGG - chr4.2:12590026-12590045 None:intergenic 40.0%
!! CATTTCTGGTTATGTGAGTG+GGG + chr4.2:12593118-12593137 MS.gene67231:CDS 40.0%
!! CCATTCATGTGCTTTGGAAT+TGG + chr4.2:12593316-12593335 MS.gene67231:CDS 40.0%
!! GATGGATCTTGATGATGCAA+AGG + chr4.2:12590235-12590254 MS.gene67231:CDS 40.0%
!! TGTGTATGGCTTTATGCTAC+TGG + chr4.2:12593850-12593869 MS.gene67231:CDS 40.0%
!!! CAATAATGTTTTGGCCTCTG+GGG + chr4.2:12591329-12591348 MS.gene67231:intron 40.0%
AAAGAGAAAGAGGCGGTTCT+AGG - chr4.2:12591911-12591930 None:intergenic 45.0%
AATTGGATAGCGAAGACAGC+AGG - chr4.2:12590585-12590604 None:intergenic 45.0%
ACAACCACCATTGTGCCAAA+TGG - chr4.2:12593391-12593410 None:intergenic 45.0%
ACACCTGTTTGTCACAAAGG+AGG - chr4.2:12593826-12593845 None:intergenic 45.0%
ACAGGACCAATGTCTGTCAA+AGG + chr4.2:12591427-12591446 MS.gene67231:intron 45.0%
ACCTTCAGTGGTTTCTCTGA+TGG + chr4.2:12593552-12593571 MS.gene67231:CDS 45.0%
ACGTTAGTGAAGAATCTGGC+TGG + chr4.2:12592714-12592733 MS.gene67231:CDS 45.0%
AGACTTCCTCATCGTACCAT+TGG - chr4.2:12590927-12590946 None:intergenic 45.0%
AGTCCAGGTAGACATCAAAG+CGG - chr4.2:12592294-12592313 None:intergenic 45.0%
CAACCACCATTGTGCCAAAT+GGG - chr4.2:12593390-12593409 None:intergenic 45.0%
CAGTTAGCACATGACAACTG+AGG - chr4.2:12591300-12591319 None:intergenic 45.0%
CATAGCTGAGATATGCATGC+AGG - chr4.2:12592953-12592972 None:intergenic 45.0%
CCTTCAGTGGTTTCTCTGAT+GGG + chr4.2:12593553-12593572 MS.gene67231:CDS 45.0%
CTATCCTTTCTTTGAGCACC+AGG + chr4.2:12592312-12592331 MS.gene67231:CDS 45.0%
CTCAAGTCAAGACCACTTCA+TGG - chr4.2:12590722-12590741 None:intergenic 45.0%
CTCAAGTGAAGACCACTTCA+TGG - chr4.2:12591244-12591263 None:intergenic 45.0%
CTGAAAACCAACACTGACCA+AGG - chr4.2:12591574-12591593 None:intergenic 45.0%
CTTCTACTGCTGCACACAAA+TGG + chr4.2:12590034-12590053 MS.gene67231:CDS 45.0%
GCACTTCTTGGTACAGTTGT+TGG + chr4.2:12593445-12593464 MS.gene67231:CDS 45.0%
GCTCAAAGAAAGGATAGTCC+AGG - chr4.2:12592309-12592328 None:intergenic 45.0%
GCTCTCACATCGTTCATTTC+TGG + chr4.2:12593104-12593123 MS.gene67231:CDS 45.0%
GGGATGATCCTGTTAACCTT+TGG + chr4.2:12589932-12589951 MS.gene67231:CDS 45.0%
GGTCATCTTCCTTACTGGAT+TGG + chr4.2:12592495-12592514 MS.gene67231:CDS 45.0%
GTACCACTTCTTCTCAGGAA+TGG - chr4.2:12593527-12593546 None:intergenic 45.0%
GTACTAGATGGGTGGCAAAA+TGG - chr4.2:12590015-12590034 None:intergenic 45.0%
GTCCAACTTTGTTCACCCAA+AGG - chr4.2:12589951-12589970 None:intergenic 45.0%
GTGGTCTTCACTTGAGAATC+AGG + chr4.2:12591248-12591267 MS.gene67231:intron 45.0%
GTTAGCACATGACAACTGAG+GGG - chr4.2:12591298-12591317 None:intergenic 45.0%
GTTGTTGGAAGAAACTGGAG+TGG + chr4.2:12593460-12593479 MS.gene67231:CDS 45.0%
TAGAATGCCTTGGTCAGTGT+TGG + chr4.2:12591564-12591583 MS.gene67231:intron 45.0%
TAGCATCCAATGGTACGATG+AGG + chr4.2:12590918-12590937 MS.gene67231:intron 45.0%
TATCCCATTTGGCACAATGG+TGG + chr4.2:12593384-12593403 MS.gene67231:CDS 45.0%
TCAACAGTAAGCTATCGGTG+TGG - chr4.2:12591405-12591424 None:intergenic 45.0%
TCTACTGCTGCACACAAATG+GGG + chr4.2:12590036-12590055 MS.gene67231:CDS 45.0%
TCTCTAGCTGCTATCCCATT+TGG + chr4.2:12593373-12593392 MS.gene67231:CDS 45.0%
TCTTAATTGTGTCTCAGGCG+AGG + chr4.2:12593050-12593069 MS.gene67231:intron 45.0%
TCTTTCCCTCTTGCACTTCT+TGG + chr4.2:12593433-12593452 MS.gene67231:CDS 45.0%
TGATTCTCGTAGCCATGAAG+TGG + chr4.2:12591229-12591248 MS.gene67231:intron 45.0%
TGCTATCCCATTTGGCACAA+TGG + chr4.2:12593381-12593400 MS.gene67231:CDS 45.0%
TGCTCGGGAAGATGATGATT+TGG + chr4.2:12592564-12592583 MS.gene67231:CDS 45.0%
TGTACCTGGTGCTCAAAGAA+AGG - chr4.2:12592319-12592338 None:intergenic 45.0%
TGTGGAGGCAGGAAAACATT+TGG + chr4.2:12592219-12592238 MS.gene67231:CDS 45.0%
TTAGCGAACACACACACTGT+TGG + chr4.2:12593784-12593803 MS.gene67231:intron 45.0%
! AAATGTTTTCCTGCCTCCAC+AGG - chr4.2:12592220-12592239 None:intergenic 45.0%
! ACTGTACCAAGAAGTGCAAG+AGG - chr4.2:12593442-12593461 None:intergenic 45.0%
! CTGTACCAAGAAGTGCAAGA+GGG - chr4.2:12593441-12593460 None:intergenic 45.0%
! GATGTTAGTGTACTGGCCTA+AGG - chr4.2:12590407-12590426 None:intergenic 45.0%
! TCCATACTTCTCGGTTCTAG+AGG - chr4.2:12591605-12591624 None:intergenic 45.0%
! TGAGTGAGGGTTTGTTCTGA+TGG + chr4.2:12591724-12591743 MS.gene67231:intron 45.0%
!! ACCTCTAGAACCGAGAAGTA+TGG + chr4.2:12591601-12591620 MS.gene67231:intron 45.0%
!! CAGTAGAAGTACTAGATGGG+TGG - chr4.2:12590023-12590042 None:intergenic 45.0%
!! GCAGCAGTAGAAGTACTAGA+TGG - chr4.2:12590027-12590046 None:intergenic 45.0%
!! GTTATTTCTCTGGTCTGCTC+TGG + chr4.2:12591840-12591859 MS.gene67231:intron 45.0%
!! TGGCTTGTTTAGTCTCCTCT+AGG - chr4.2:12590702-12590721 None:intergenic 45.0%
!! TTTCTGGTTATGTGAGTGGG+GGG + chr4.2:12593120-12593139 MS.gene67231:CDS 45.0%
!!! AAATTATTAAATTTAAAACA+AGG - chr4.2:12591762-12591781 None:intergenic 5.0%
!!! AATATTGAAATATTTATTTT+TGG + chr4.2:12592358-12592377 MS.gene67231:intron 5.0%
!!! TATATTTTTTTTAATGTTTA+AGG + chr4.2:12591975-12591994 MS.gene67231:intron 5.0%
AACCTACAGCTCCTGCACAT+TGG - chr4.2:12594240-12594259 None:intergenic 50.0%
AAGAGGCTGGCAGTAGTTAC+AGG + chr4.2:12590655-12590674 MS.gene67231:intron 50.0%
ACACTACCTGGATCTGAGCT+TGG + chr4.2:12591360-12591379 MS.gene67231:intron 50.0%
ACATGACAACTGAGGGGATC+TGG - chr4.2:12591292-12591311 None:intergenic 50.0%
AGAAAGACGTCCATTGCCAG+TGG - chr4.2:12593952-12593971 None:intergenic 50.0%
ATAGCGAAGACAGCAGGCAT+GGG - chr4.2:12590579-12590598 None:intergenic 50.0%
ATGTACTCACGAAATGGGGG+TGG + chr4.2:12593143-12593162 MS.gene67231:intron 50.0%
CACTACCTGGATCTGAGCTT+GGG + chr4.2:12591361-12591380 MS.gene67231:intron 50.0%
CAGGGAGATCTCACTAGAAG+AGG + chr4.2:12590638-12590657 MS.gene67231:intron 50.0%
CAGTTCTCTCTCTCTCTCTC+TGG + chr4.2:12593210-12593229 MS.gene67231:intron 50.0%
CCCATCAGAGAAACCACTGA+AGG - chr4.2:12593556-12593575 None:intergenic 50.0%
CTGAGAACTACCACTGGCAA+TGG + chr4.2:12593939-12593958 MS.gene67231:CDS 50.0%
CTTTCAGCTGTAGTTGGCAC+AGG + chr4.2:12592785-12592804 MS.gene67231:CDS 50.0%
GAGATCTCACTAGAAGAGGC+TGG + chr4.2:12590642-12590661 MS.gene67231:intron 50.0%
GAGCTAAGGCAGGATCAACA+TGG - chr4.2:12592401-12592420 None:intergenic 50.0%
GATGCTCTCTTGCTACCTTC+TGG + chr4.2:12591042-12591061 MS.gene67231:intron 50.0%
GGGATGTACTCACGAAATGG+GGG + chr4.2:12593140-12593159 MS.gene67231:CDS 50.0%
GGGGATGTACTCACGAAATG+GGG + chr4.2:12593139-12593158 MS.gene67231:CDS 50.0%
GGGGGATGTACTCACGAAAT+GGG + chr4.2:12593138-12593157 MS.gene67231:CDS 50.0%
GGTACGATGAGGAAGTCTGA+AGG + chr4.2:12590929-12590948 MS.gene67231:intron 50.0%
GTCCCATTCCTGAGAAGAAG+TGG + chr4.2:12593521-12593540 MS.gene67231:CDS 50.0%
TAGTGTCTATCTCACCCCAG+AGG - chr4.2:12591346-12591365 None:intergenic 50.0%
TCAAGATGTCCCAAAGCCTG+TGG + chr4.2:12592201-12592220 MS.gene67231:CDS 50.0%
TCAGTGGTTTCTCTGATGGG+AGG + chr4.2:12593556-12593575 MS.gene67231:CDS 50.0%
TCTGGCTGGAAACTTGTGCA+CGG + chr4.2:12592728-12592747 MS.gene67231:CDS 50.0%
TGTACTCACGAAATGGGGGT+GGG + chr4.2:12593144-12593163 MS.gene67231:intron 50.0%
TTCCAATGTGCAGGAGCTGT+AGG + chr4.2:12594235-12594254 MS.gene67231:intron 50.0%
TTCTTCTCAGGAATGGGACG+AGG - chr4.2:12593520-12593539 None:intergenic 50.0%
! GAGAAACCACTGAAGGTGTG+AGG - chr4.2:12593549-12593568 None:intergenic 50.0%
! GCAGGAGCTGTAGGTTTTCT+TGG + chr4.2:12594244-12594263 MS.gene67231:intron 50.0%
! GTGAGGTACCACTTCTTCTC+AGG - chr4.2:12593532-12593551 None:intergenic 50.0%
! GTTCTAGGCATACCCCACAA+AGG - chr4.2:12591896-12591915 None:intergenic 50.0%
!!! ATAAGGGGTTTTGGGATCCG+TGG + chr4.2:12592128-12592147 MS.gene67231:intron 50.0%
ACTGCTGCACACAAATGGGG+TGG + chr4.2:12590039-12590058 MS.gene67231:CDS 55.0%
AGATGTCCCAAAGCCTGTGG+AGG + chr4.2:12592204-12592223 MS.gene67231:CDS 55.0%
ATGGGGCTGTGTCCTCTGAA+AGG - chr4.2:12590561-12590580 None:intergenic 55.0%
CTCAGTCACAGAGCTAAGGC+AGG - chr4.2:12592411-12592430 None:intergenic 55.0%
GATAGCGAAGACAGCAGGCA+TGG - chr4.2:12590580-12590599 None:intergenic 55.0%
GCACACAAATGGGGTGGTCT+TGG + chr4.2:12590045-12590064 MS.gene67231:CDS 55.0%
GGGGGGATGTACTCACGAAA+TGG + chr4.2:12593137-12593156 MS.gene67231:CDS 55.0%
GGGGTGAGATAGACACTACC+TGG + chr4.2:12591348-12591367 MS.gene67231:intron 55.0%
GTGGTACCTCACACCTTCAG+TGG + chr4.2:12593540-12593559 MS.gene67231:CDS 55.0%
TAGCGAAGACAGCAGGCATG+GGG - chr4.2:12590578-12590597 None:intergenic 55.0%
TGACACCCAAGCTCAGATCC+AGG - chr4.2:12591369-12591388 None:intergenic 55.0%
TTCCTGCCTCCACAGGCTTT+GGG - chr4.2:12592213-12592232 None:intergenic 55.0%
TTTCCTGCCTCCACAGGCTT+TGG - chr4.2:12592214-12592233 None:intergenic 55.0%
! ACGCCGCTTTGATGTCTACC+TGG + chr4.2:12592288-12592307 MS.gene67231:CDS 55.0%
! CAAATGGGGTGGTCTTGGTG+AGG + chr4.2:12590050-12590069 MS.gene67231:CDS 55.0%
! GGTGGTCTTGGTGAGGTTCT+GGG + chr4.2:12590057-12590076 MS.gene67231:CDS 55.0%
AGGTGCTCAGCTAGCACTGC+TGG + chr4.2:12592805-12592824 MS.gene67231:CDS 60.0%
ATGGGAGGACTGCTCCCCTT+TGG + chr4.2:12593571-12593590 MS.gene67231:CDS 60.0%
CAACTGAGGGGATCTGGACC+TGG - chr4.2:12591286-12591305 None:intergenic 60.0%
! GGGTGGTCTTGGTGAGGTTC+TGG + chr4.2:12590056-12590075 MS.gene67231:CDS 60.0%
!! GGTCTTGGTGAGGTTCTGGG+TGG + chr4.2:12590060-12590079 MS.gene67231:CDS 60.0%
GTCCCAAAGCCTGTGGAGGC+AGG + chr4.2:12592208-12592227 MS.gene67231:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 12589904 12594315 12589904 ID=MS.gene67231
chr4.2 mRNA 12589904 12594315 12589904 ID=MS.gene67231.t1;Parent=MS.gene67231
chr4.2 exon 12589904 12590123 12589904 ID=MS.gene67231.t1.exon1;Parent=MS.gene67231.t1
chr4.2 CDS 12589904 12590123 12589904 ID=cds.MS.gene67231.t1;Parent=MS.gene67231.t1
chr4.2 exon 12590207 12590311 12590207 ID=MS.gene67231.t1.exon2;Parent=MS.gene67231.t1
chr4.2 CDS 12590207 12590311 12590207 ID=cds.MS.gene67231.t1;Parent=MS.gene67231.t1
chr4.2 exon 12591885 12591902 12591885 ID=MS.gene67231.t1.exon3;Parent=MS.gene67231.t1
chr4.2 CDS 12591885 12591902 12591885 ID=cds.MS.gene67231.t1;Parent=MS.gene67231.t1
chr4.2 exon 12591997 12592094 12591997 ID=MS.gene67231.t1.exon4;Parent=MS.gene67231.t1
chr4.2 CDS 12591997 12592094 12591997 ID=cds.MS.gene67231.t1;Parent=MS.gene67231.t1
chr4.2 exon 12592181 12592333 12592181 ID=MS.gene67231.t1.exon5;Parent=MS.gene67231.t1
chr4.2 CDS 12592181 12592333 12592181 ID=cds.MS.gene67231.t1;Parent=MS.gene67231.t1
chr4.2 exon 12592460 12592594 12592460 ID=MS.gene67231.t1.exon6;Parent=MS.gene67231.t1
chr4.2 CDS 12592460 12592594 12592460 ID=cds.MS.gene67231.t1;Parent=MS.gene67231.t1
chr4.2 exon 12592707 12592873 12592707 ID=MS.gene67231.t1.exon7;Parent=MS.gene67231.t1
chr4.2 CDS 12592707 12592873 12592707 ID=cds.MS.gene67231.t1;Parent=MS.gene67231.t1
chr4.2 exon 12593067 12593161 12593067 ID=MS.gene67231.t1.exon8;Parent=MS.gene67231.t1
chr4.2 CDS 12593067 12593161 12593067 ID=cds.MS.gene67231.t1;Parent=MS.gene67231.t1
chr4.2 exon 12593272 12593645 12593272 ID=MS.gene67231.t1.exon9;Parent=MS.gene67231.t1
chr4.2 CDS 12593272 12593645 12593272 ID=cds.MS.gene67231.t1;Parent=MS.gene67231.t1
chr4.2 exon 12593842 12594115 12593842 ID=MS.gene67231.t1.exon10;Parent=MS.gene67231.t1
chr4.2 CDS 12593842 12594115 12593842 ID=cds.MS.gene67231.t1;Parent=MS.gene67231.t1
chr4.2 exon 12594248 12594315 12594248 ID=MS.gene67231.t1.exon11;Parent=MS.gene67231.t1
chr4.2 CDS 12594248 12594315 12594248 ID=cds.MS.gene67231.t1;Parent=MS.gene67231.t1
Gene Sequence

>MS.gene67231

ATGTATTTTATTTTATTGCAGTATCAACGGGATGATCCTGTTAACCTTTGGGTGAACAAAGTTGGACCCTATAACAATCCACAAGAAACATACAATTATTACAGTCTCCCATTTTGCCACCCATCTAGTACTTCTACTGCTGCACACAAATGGGGTGGTCTTGGTGAGGTTCTGGGTGGCAATGAACTCATCGACAGCCAAATTGAGATCAAGTTCCTAAGTATGAAAACTTCTCTTGTACTATTTATATGATAGAAGAGTTGTCAAAAAGAAAACCAGCTTTAACGAATACTCTTATTTCAGGAAATGTGGATAAAACGGTCTTTTGCCAGATGGATCTTGATGATGCAAAGGTTAAACAGTTCAAGCATGCAATAGAGAATAATTACTGGTTTGAATTTTTCATGGGTATGTTTTGAATCATTTCTTACAGTTGTTATTTTGTTAAATCATACAATGATTGTACTTTCAAGAAATGTTGAAAGCTAGCATGAAGTTTTCCTTAGGCCAGTACACTAACATCAAGAATAACAGTTACAACGTAAAAATAACAGAAGCGGTCAGAAAACACCTACAAACTAAGAAACACACATCGGGGAAAAATATCCCTTTGAGCAAGAGTATAAACCATAGAAGTTGGTGTAAATAATATTTCCTTTCAGAGGACACAGCCCCATGCCTGCTGTCTTCGCTATCCAATTGAATGAATTATTTTACAATCTTAGAATCAGCATCAGGGAGATCTCACTAGAAGAGGCTGGCAGTAGTTACAGGTCATGACATCTTCTAATCAATCCTAGAGGAGACTAAACAAGCCATGAAGTGGTCTTGACTTGAGAATCAGTTTCAAGACTTATTTATGGGAACAGAAGCAAGTAACATCATGATGCCCTATTATGAGTCAAAAGCAGTTAAAATGGCAATGAAACAAGAAACAATCAATCTGAGAAATGTTATCATGAACAAGTTCTCTTCAAAACAAATAAATTATCGAGGAGTGTCACTGAACTGTTTTAGCATCCAATGGTACGATGAGGAAGTCTGAAGGCATCATCCTGCAAATGATTCATCAATAGGTGCAAACACAAGCATGTGTGCACAACTTGTGTTTGCACCTATTGACGAATCATTGGCATATGATGCTCTCTTGCTACCTTCTGGCTTCATCATCATACAGTTGGATCCTAAAATAGTTCCGTGACTTCCTAGATAACTTATTAGTTTTCAATGAACTCGTTCATGAAAACATTTTATTAGATTGATTGTTTTTTGTTTCATGAGCATTCCGACTGCATTTGATTATAATAGGACATTATGGTGCTACTTGATTCTCGTAGCCATGAAGTGGTCTTCACTTGAGAATCAGGGATATAGTTACACCAGGTCCAGATCCCCTCAGTTGTCATGTGCTAACTGATGTCTGTACAATAATGTTTTGGCCTCTGGGGTGAGATAGACACTACCTGGATCTGAGCTTGGGTGTCACTATCTCATTCAACCACACCGATAGCTTACTGTTGATAACAGGACCAATGTCTGTCAAAGGAGTATGAAGTTACATTGACAGCTTACTGTCTACATGATGACATTTATGTATGGTTTTGACATAAAGAAGTATTAAGTTACAGATTCTTTATATGAAGCTGTTTCTTAACTATTCTAGAATGCCTTGGTCAGTGTTGGTTTTCAGTTTTATAACCTCTAGAACCGAGAAGTATGGAATCAAGAATTCTTTGTGAAATAACTGCTAAAGCATTTTTAAATCCAATCCAATATTGTTTGGTAATTGATGTTATTTCTTCATTGTTGTCATAATGTTATGAGTGAGGGTTTGTTCTGATGGTTGATCCTCATTCCTTGTTTTAAATTTAATAATTTCTAGTTTTTTTTTCCTTCCATTTTTGCTGAATAACTCACTTGTTTTTTTTTTGTTGTTGTTATTTCTCTGGTCTGCTCTGGAATGCGCTAAACACAAATTCAGATGATCTTCCTTTGTGGGGTATGCCTAGAACCGCCTCTTTCTCTTTATTTGGTGTGATATTGTATTTCATTTGTTCATCATTACGAAAGATATATTTTTTTTAATGTTTAAGGATATGTTGGTGAGCTACATCCTGATAAGCATAGCGATAATGGCAAGCACGTCCTTTACACACACAAGAATATTATTGTTAAATACAATAATGATCAGGTCAGAAGTTATTTACACATCTAATCCTATCTTATAAGGGGTTTTGGGATCCGTGGAGTTTCATATTTAGGTCTCCTTCTGTGCAGATCATTCATGTTAATCTCACTCAAGATGTCCCAAAGCCTGTGGAGGCAGGAAAACATTTGGATTTGACATATTCTGTCAAATGGGTTCCTACTAATATCACTTTTGGACGCCGCTTTGATGTCTACCTGGACTATCCTTTCTTTGAGCACCAGGTACAATCCATTTTTTTTAAAAATAATATTGAAATATTTATTTTTGGTTAATTGCTGTGTTCATCCATGTTGATCCTGCCTTAGCTCTGTGACTGAGAATTTTGCTCCTCCTTTTCTGTCTCATAGATTCACTGGTTCTCCATTTTCAACTCTTTCATGATGGTCATCTTCCTTACTGGATTGGTATCAATGATATTAATGCGAACTCTAAGAAATGACTATGCAAAATATGCTCGGGAAGATGATGATTTGGAATCTCTGGTGATGGTTTTATAAATTTTATCTGTTCTTATTTATGGAATATGAACTCTTCATTCCTAGAAAATTATGTTTTTCTAATCACAATTTTTCGTCATTGCTTACATGTTTACAGGAGAGAGACGTTAGTGAAGAATCTGGCTGGAAACTTGTGCACGGTGATGTTTTTCGGCCTCCTCGCTATTTAGTTATTCTTTCAGCTGTAGTTGGCACAGGTGCTCAGCTAGCACTGCTGGTTCTTCTTGTCATCTTACTGGCTATTATTGGGATGTTGTATATTGGGTATGTGCATAGCATTCAACTAACTGCAAAATTAGTCTAATTAATGAATTCAATTATCATGTAGCACATGGAAATTCCTGCATGCATATCTCAGCTATGTATGCACTGTTCTAGTTTTTTGTAATGGACTTCATAATGTTTGTCCATTGCTTTTCATTCTCTGCCAACTAACATTCTCTTAATTGTGTCTCAGGCGAGGAGCAATTGTCACAACCTTCATTGTTTGTTATGCTCTCACATCGTTCATTTCTGGTTATGTGAGTGGGGGGATGTACTCACGAAATGGGGGTGGGAATCTCTTTGAAGTTTTTTTTTTTGTGTGGCTTTGTCTTAGCTCAGTTCTCTCTCTCTCTCTCTGGTTTCGAATGACTGTATAACTATTTTTATTTGCATGTTAGGTAAAAGCTGGATTAAATCCATGATCCTTACAGCTTCTTTATTCCCATTCATGTGCTTTGGAATTGGATTTGCCTTAAACACTATTGCTATATTCTATGGGTCTCTAGCTGCTATCCCATTTGGCACAATGGTGGTTGTTTTTGTCATTTGGGCTTTCATCTCTTTCCCTCTTGCACTTCTTGGTACAGTTGTTGGAAGAAACTGGAGTGGTGCTCCAAATAATCCATGTCGTGTAAAAACTATTCCTCGTCCCATTCCTGAGAAGAAGTGGTACCTCACACCTTCAGTGGTTTCTCTGATGGGAGGACTGCTCCCCTTTGGCAGCATATTTATTGAAATGTATTTTGTATTTACTTCCTTCTGGAATTACAAGGTGAACTTCAGCGCCACGACTTGTTTTAATTATCAAATTCCTTTTATTTGTTGGTTTTGTCATAACAGCTACTCGTGCCTTTATCAAGAAAAATGACTTAGATAATGGCCCTTTAAAGCAAATACTCTATGTTTGTATTTAGCGAACACACACACTGTTGGCTTATCTACACTGTTTCCTCCTTTGTGACAAACAGGTGTACTATGTGTATGGCTTTATGCTACTGGTTTTTCTGATTCTCACCATCGTTACTGTTTGTGTGACAATTGTCGGGACATACTTTTTGTTAAATGCTGAGAACTACCACTGGCAATGGACGTCTTTCTTTTCAGCTGCCTCAACATCAGTTTATGTGTATTTATACTCAATATATTATTACTACGTGAAGACAAAGATGTCAGGGTTCTTCCAAACCAGCTTCTATTTTGGATACACTTTGATGTTTTCTCTTGGACTAGGAATTCTTTGCGGTGAGTCTCGTATTTCTCTGTAGATTTTCATCCTGCATATGTGATAGGATATCTTATCATATGCGGAATAAATAAATGATTTTGCTTTTATCACCTGAACTGTTGGTTGAAAGTTTTTGTTCCAATGTGCAGGAGCTGTAGGTTTTCTTGGTTCCAATTTGTTTGTGAGAAGGATCTACAGAAACATCAAGTGTGATTAA
Protein sequence

>MS.gene67231.t1

MYFILLQYQRDDPVNLWVNKVGPYNNPQETYNYYSLPFCHPSSTSTAAHKWGGLGEVLGGNELIDSQIEIKFLRNVDKTVFCQMDLDDAKVKQFKHAIENNYWFEFFMDDLPLWGYVGELHPDKHSDNGKHVLYTHKNIIVKYNNDQIIHVNLTQDVPKPVEAGKHLDLTYSVKWVPTNITFGRRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYAREDDDLESLERDVSEESGWKLVHGDVFRPPRYLVILSAVVGTGAQLALLVLLVILLAIIGMLYIGRGAIVTTFIVCYALTSFISGYVSGGMYSRNGGKSWIKSMILTASLFPFMCFGIGFALNTIAIFYGSLAAIPFGTMVVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVVSLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFLILTIVTVCVTIVGTYFLLNAENYHWQWTSFFSAASTSVYVYLYSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRRIYRNIKCD