Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053338.t1 | XP_013467035.1 | 97.7 | 300 | 7 | 0 | 1 | 300 | 1 | 300 | 5.10E-164 | 587 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053338.t1 | Q5XEP2 | 39.3 | 117 | 71 | 0 | 15 | 131 | 386 | 502 | 5.6e-18 | 93.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053338.t1 | A0A072VSG1 | 97.7 | 300 | 7 | 0 | 1 | 300 | 1 | 300 | 3.7e-164 | 587.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053338 | MS.gene56095 | 0.899087 | 2.80E-77 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene05880 | MS.gene053338 | PPI |
| MS.gene35520 | MS.gene053338 | PPI |
| MS.gene034375 | MS.gene053338 | PPI |
| MS.gene015787 | MS.gene053338 | PPI |
| MS.gene049084 | MS.gene053338 | PPI |
| MS.gene059288 | MS.gene053338 | PPI |
| MS.gene05958 | MS.gene053338 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053338.t1 | MTR_1g041435 | 97.667 | 300 | 7 | 0 | 1 | 300 | 1 | 300 | 0.0 | 608 |
| MS.gene053338.t1 | MTR_1g041435 | 98.805 | 251 | 3 | 0 | 50 | 300 | 25 | 275 | 0.0 | 518 |
| MS.gene053338.t1 | MTR_5g012030 | 36.441 | 118 | 75 | 0 | 15 | 132 | 396 | 513 | 2.38e-19 | 89.0 |
| MS.gene053338.t1 | MTR_5g012030 | 36.364 | 99 | 63 | 0 | 15 | 113 | 6 | 104 | 1.55e-14 | 74.3 |
| MS.gene053338.t1 | MTR_7g115280 | 36.449 | 107 | 68 | 0 | 15 | 121 | 339 | 445 | 2.10e-15 | 77.0 |
| MS.gene053338.t1 | MTR_3g452710 | 31.746 | 126 | 86 | 0 | 1 | 126 | 1 | 126 | 3.01e-13 | 70.5 |
| MS.gene053338.t1 | MTR_3g452710 | 31.746 | 126 | 86 | 0 | 1 | 126 | 1 | 126 | 3.12e-13 | 70.5 |
| MS.gene053338.t1 | MTR_5g063200 | 30.252 | 119 | 79 | 1 | 1 | 119 | 438 | 552 | 3.84e-13 | 70.5 |
| MS.gene053338.t1 | MTR_2g078020 | 26.829 | 123 | 89 | 1 | 17 | 139 | 468 | 589 | 7.30e-13 | 69.7 |
| MS.gene053338.t1 | MTR_2g078020 | 26.829 | 123 | 89 | 1 | 17 | 139 | 468 | 589 | 7.47e-13 | 69.3 |
| MS.gene053338.t1 | MTR_3g087480 | 28.571 | 105 | 75 | 0 | 15 | 119 | 460 | 564 | 1.25e-12 | 68.6 |
| MS.gene053338.t1 | MTR_3g074230 | 27.049 | 122 | 88 | 1 | 18 | 139 | 431 | 551 | 7.69e-12 | 66.2 |
| MS.gene053338.t1 | MTR_3g074230 | 27.049 | 122 | 88 | 1 | 18 | 139 | 431 | 551 | 8.10e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053338.t1 | AT1G04190 | 74.227 | 291 | 75 | 0 | 10 | 300 | 14 | 304 | 1.29e-165 | 464 |
| MS.gene053338.t1 | AT1G62740 | 38.983 | 118 | 72 | 0 | 15 | 132 | 386 | 503 | 7.57e-22 | 96.3 |
| MS.gene053338.t1 | AT1G62740 | 38.835 | 103 | 62 | 1 | 15 | 117 | 6 | 107 | 3.74e-14 | 73.6 |
| MS.gene053338.t1 | AT1G12270 | 36.441 | 118 | 75 | 0 | 15 | 132 | 387 | 504 | 2.90e-20 | 91.7 |
| MS.gene053338.t1 | AT1G12270 | 38.835 | 103 | 62 | 1 | 15 | 117 | 6 | 107 | 8.12e-13 | 69.3 |
| MS.gene053338.t1 | AT4G12400 | 39.316 | 117 | 70 | 1 | 15 | 130 | 373 | 489 | 1.48e-19 | 89.4 |
| MS.gene053338.t1 | AT4G12400 | 39.806 | 103 | 61 | 1 | 15 | 117 | 6 | 107 | 2.32e-16 | 80.1 |
| MS.gene053338.t1 | AT4G12400 | 39.316 | 117 | 70 | 1 | 15 | 130 | 373 | 489 | 1.84e-19 | 89.4 |
| MS.gene053338.t1 | AT4G12400 | 39.806 | 103 | 61 | 1 | 15 | 117 | 6 | 107 | 2.67e-16 | 79.7 |
| MS.gene053338.t1 | AT2G42810 | 33.871 | 124 | 81 | 1 | 3 | 126 | 6 | 128 | 3.61e-15 | 76.3 |
| MS.gene053338.t1 | AT2G42810 | 33.871 | 124 | 81 | 1 | 3 | 126 | 6 | 128 | 3.96e-15 | 76.3 |
| MS.gene053338.t1 | AT2G42810 | 33.871 | 124 | 81 | 1 | 3 | 126 | 6 | 128 | 4.03e-15 | 76.3 |
| MS.gene053338.t1 | AT2G42810 | 33.871 | 124 | 81 | 1 | 3 | 126 | 6 | 128 | 4.03e-15 | 76.3 |
| MS.gene053338.t1 | AT2G42810 | 33.871 | 124 | 81 | 1 | 3 | 126 | 6 | 128 | 4.03e-15 | 76.3 |
| MS.gene053338.t1 | AT3G04710 | 36.190 | 105 | 67 | 0 | 17 | 121 | 334 | 438 | 1.85e-14 | 73.9 |
| MS.gene053338.t1 | AT3G04710 | 36.190 | 105 | 67 | 0 | 17 | 121 | 333 | 437 | 1.88e-14 | 73.9 |
| MS.gene053338.t1 | AT3G04710 | 38.000 | 100 | 62 | 0 | 17 | 116 | 558 | 657 | 2.38e-14 | 73.9 |
| MS.gene053338.t1 | AT3G14950 | 31.967 | 122 | 81 | 2 | 14 | 133 | 261 | 382 | 1.56e-13 | 71.6 |
| MS.gene053338.t1 | AT5G10090 | 27.193 | 114 | 82 | 1 | 15 | 127 | 475 | 588 | 3.58e-13 | 70.5 |
| MS.gene053338.t1 | AT1G78120 | 31.707 | 123 | 79 | 1 | 13 | 135 | 161 | 278 | 5.10e-13 | 69.7 |
| MS.gene053338.t1 | AT1G78120 | 26.415 | 106 | 78 | 0 | 18 | 123 | 401 | 506 | 9.37e-12 | 66.2 |
| MS.gene053338.t1 | AT1G78120 | 31.707 | 123 | 79 | 1 | 13 | 135 | 161 | 278 | 5.25e-13 | 69.7 |
| MS.gene053338.t1 | AT5G65160 | 28.070 | 114 | 81 | 1 | 17 | 129 | 476 | 589 | 5.39e-13 | 70.1 |
| MS.gene053338.t1 | AT3G58620 | 24.648 | 142 | 107 | 0 | 15 | 156 | 453 | 594 | 1.04e-12 | 68.9 |
| MS.gene053338.t1 | AT3G58620 | 24.638 | 138 | 104 | 0 | 15 | 152 | 453 | 590 | 1.72e-12 | 68.6 |
| MS.gene053338.t1 | AT2G42580 | 27.143 | 140 | 98 | 2 | 15 | 152 | 462 | 599 | 6.97e-12 | 66.6 |
| MS.gene053338.t1 | AT1G53300 | 26.613 | 124 | 90 | 1 | 15 | 138 | 469 | 591 | 2.71e-11 | 64.7 |
| MS.gene053338.t1 | AT4G08320 | 30.303 | 132 | 91 | 1 | 3 | 133 | 167 | 298 | 3.75e-11 | 63.9 |
Find 53 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAGCTGCTGTGTGTTTC+TGG | 0.204324 | 1.2:+25917268 | None:intergenic |
| ACAATTGTACTAACCAATTC+AGG | 0.305169 | 1.2:+25919500 | None:intergenic |
| TTCAATACTTCTTGACTTTG+TGG | 0.320951 | 1.2:+25919629 | None:intergenic |
| TACACTTCCAGGGACATTTC+CGG | 0.325644 | 1.2:-25920039 | MS.gene053338:intron |
| ACCTTATCAATATTCACAAT+TGG | 0.335540 | 1.2:+25917496 | None:intergenic |
| CCTTATCAATATTCACAATT+GGG | 0.352170 | 1.2:+25917497 | None:intergenic |
| TTTCCGGAAGGGATGCATAT+TGG | 0.353524 | 1.2:-25920023 | MS.gene053338:CDS |
| GCTTCCATTTCCTTGATCCT+TGG | 0.353756 | 1.2:+25916458 | None:intergenic |
| GCTTGCTATCTTTCACTAGT+TGG | 0.356358 | 1.2:+25919588 | None:intergenic |
| TCAATACTTCTTGACTTTGT+GGG | 0.357106 | 1.2:+25919630 | None:intergenic |
| CTCTTGCAGTCTGAAAAGTA+TGG | 0.358770 | 1.2:-25917664 | MS.gene053338:intron |
| AGTTTACTTTCTTCCTGATA+AGG | 0.380004 | 1.2:-25917545 | MS.gene053338:CDS |
| CTCAAGAGCAGCCTGCTTAG+TGG | 0.383994 | 1.2:-25917212 | MS.gene053338:CDS |
| AGATACACTGAAGCCTGAAT+TGG | 0.385448 | 1.2:-25919513 | MS.gene053338:intron |
| TACATCATCATATCGTTTCA+TGG | 0.396873 | 1.2:+25919997 | None:intergenic |
| TATTCCCAGTTCAAATGAAA+AGG | 0.399079 | 1.2:-25916374 | MS.gene053338:CDS |
| CTTCAGTGTATCTAAATGTT+TGG | 0.401626 | 1.2:+25919523 | None:intergenic |
| TGCTGCAGCATTGCTACAAT+TGG | 0.401785 | 1.2:-25920206 | MS.gene053338:CDS |
| TCGGCATACTGCCTAAGAAA+TGG | 0.431760 | 1.2:+25917244 | None:intergenic |
| CCTCCAATATGCATCCCTTC+CGG | 0.435592 | 1.2:+25920020 | None:intergenic |
| CTATACTCAAGCCATCAAAA+AGG | 0.441533 | 1.2:-25922050 | MS.gene053338:CDS |
| AAGCTCTGAGATGTCTTTGA+AGG | 0.455578 | 1.2:-25922125 | MS.gene053338:CDS |
| CCCAATTGTGAATATTGATA+AGG | 0.468621 | 1.2:-25917497 | MS.gene053338:intron |
| AATTAAATTAAAACCCGAAT+GGG | 0.475131 | 1.2:-25920146 | MS.gene053338:CDS |
| ATTCCCAGTTCAAATGAAAA+GGG | 0.487057 | 1.2:-25916373 | MS.gene053338:CDS |
| TCTGGAAAGGCCAAGGATCA+AGG | 0.487214 | 1.2:-25916468 | MS.gene053338:CDS |
| CTCCTTCCGTGCGAAAATTG+TGG | 0.490264 | 1.2:-25916399 | MS.gene053338:CDS |
| AAGGCCAAGGATCAAGGAAA+TGG | 0.491879 | 1.2:-25916462 | MS.gene053338:CDS |
| AGTATGGATCTGAAGAAAGC+TGG | 0.495429 | 1.2:-25917648 | MS.gene053338:CDS |
| GTGTGTTTCTGGTGACTCAA+AGG | 0.501172 | 1.2:+25917279 | None:intergenic |
| ATTAAAACCCGAATGGGAAA+AGG | 0.501785 | 1.2:-25920140 | MS.gene053338:intron |
| GAGATGTCTTTGAAGGATCA+AGG | 0.536135 | 1.2:-25922118 | MS.gene053338:CDS |
| TGGAAGCATGCACAGAATGA+TGG | 0.537108 | 1.2:-25916442 | MS.gene053338:CDS |
| TGGAGACTGCTGTAAAATCA+TGG | 0.542267 | 1.2:-25917594 | MS.gene053338:CDS |
| CTTATCAATATTCACAATTG+GGG | 0.543694 | 1.2:+25917498 | None:intergenic |
| AGCTATCTGAAAGGAAGCTA+AGG | 0.545730 | 1.2:+25919664 | None:intergenic |
| CTCATTCCTCGTCGAGACCA+TGG | 0.548485 | 1.2:-25917614 | MS.gene053338:CDS |
| CCGGAAGGGATGCATATTGG+AGG | 0.551327 | 1.2:-25920020 | MS.gene053338:CDS |
| TGTGTCTGCCAGGTCTGGAA+AGG | 0.560424 | 1.2:-25916481 | MS.gene053338:intron |
| AAACATCATTGCTTATCCAC+AGG | 0.566500 | 1.2:-25917182 | MS.gene053338:intron |
| TAGCAAGCGAGCTCAAGAAG+TGG | 0.567037 | 1.2:-25919573 | MS.gene053338:CDS |
| TGCCAGGTCTGGAAAGGCCA+AGG | 0.570453 | 1.2:-25916475 | MS.gene053338:intron |
| CAATTAAATTAAAACCCGAA+TGG | 0.579725 | 1.2:-25920147 | MS.gene053338:CDS |
| AAAAGGGACAGATACTGTGC+AGG | 0.590409 | 1.2:-25916357 | MS.gene053338:CDS |
| ATGGCATGAAACTTCTTCAG+TGG | 0.598632 | 1.2:-25917575 | MS.gene053338:CDS |
| TGCTCTTGAGAAAGACTCCT+CGG | 0.607484 | 1.2:+25917225 | None:intergenic |
| TTCCAGGGACATTTCCGGAA+GGG | 0.614429 | 1.2:-25920034 | MS.gene053338:intron |
| TATGAGATCGAATGTTGACA+TGG | 0.643506 | 1.2:-25919546 | MS.gene053338:CDS |
| TTATCAATATTCACAATTGG+GGG | 0.644295 | 1.2:+25917499 | None:intergenic |
| ATACTGCGAAGCTATCTGAA+AGG | 0.645570 | 1.2:+25919655 | None:intergenic |
| ATTTCTTAGGCAGTATGCCG+AGG | 0.649476 | 1.2:-25917242 | MS.gene053338:CDS |
| CTTCCAGGGACATTTCCGGA+AGG | 0.663854 | 1.2:-25920035 | MS.gene053338:intron |
| CAGTCTCCATGGTCTCGACG+AGG | 0.701435 | 1.2:+25917608 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAGATATGTATAAAT+AGG | - | chr1.2:25921385-25921404 | MS.gene053338:intron | 10.0% |
| !!! | ATTGAAAAATGTATTTTTAA+GGG | + | chr1.2:25918379-25918398 | None:intergenic | 10.0% |
| !! | AAAAATTATTCAAAAACTAG+AGG | + | chr1.2:25919201-25919220 | None:intergenic | 15.0% |
| !! | AAATAAATTGTATTATAGTG+TGG | + | chr1.2:25919776-25919795 | None:intergenic | 15.0% |
| !! | AAGGAATTTGAAAAATTAAT+AGG | + | chr1.2:25920990-25921009 | None:intergenic | 15.0% |
| !! | AATTAGAATGTTTCTTTAAA+AGG | + | chr1.2:25919723-25919742 | None:intergenic | 15.0% |
| !! | AATTTGAAAGAAAAAAGAAA+AGG | + | chr1.2:25916460-25916479 | None:intergenic | 15.0% |
| !! | ATTAAAGAAATTAACATAGA+AGG | + | chr1.2:25919332-25919351 | None:intergenic | 15.0% |
| !! | ATTGACAATTATAATAATAG+TGG | + | chr1.2:25918089-25918108 | None:intergenic | 15.0% |
| !! | ATTTGAAAGAAAAAAGAAAA+GGG | + | chr1.2:25916459-25916478 | None:intergenic | 15.0% |
| !! | TATTTATTTGATATGAGTAT+CGG | + | chr1.2:25919535-25919554 | None:intergenic | 15.0% |
| !! | TGGTAATCTTTATATAATTT+GGG | + | chr1.2:25919559-25919578 | None:intergenic | 15.0% |
| !!! | AAAAGAAAGTATAAATCAAA+AGG | + | chr1.2:25921541-25921560 | None:intergenic | 15.0% |
| !!! | AAGTGTTTTTATTATAGTTT+CGG | - | chr1.2:25916652-25916671 | MS.gene053338:intron | 15.0% |
| !!! | ATTTTGTAACTTTTTTCATT+TGG | - | chr1.2:25916477-25916496 | MS.gene053338:intron | 15.0% |
| !!! | CATTGAAAAATGTATTTTTA+AGG | + | chr1.2:25918380-25918399 | None:intergenic | 15.0% |
| !!! | TTATTTTAGACTATTGAATA+GGG | + | chr1.2:25919269-25919288 | None:intergenic | 15.0% |
| !!! | TTCAATAGTCTAAAATAAAA+CGG | - | chr1.2:25919271-25919290 | MS.gene053338:intron | 15.0% |
| !!! | TTTATTTTAGACTATTGAAT+AGG | + | chr1.2:25919270-25919289 | None:intergenic | 15.0% |
| !!! | TTTTGTAACTTTTTTCATTT+GGG | - | chr1.2:25916478-25916497 | MS.gene053338:intron | 15.0% |
| !! | AATTAAATTAAAACCCGAAT+GGG | - | chr1.2:25918305-25918324 | MS.gene053338:intron | 20.0% |
| !! | AGCATAAGATATTTATGAAT+TGG | + | chr1.2:25918187-25918206 | None:intergenic | 20.0% |
| !! | ATATAGGATATGATATGTTT+AGG | + | chr1.2:25919477-25919496 | None:intergenic | 20.0% |
| !! | ATATTGAAGAAGATAAAGAA+AGG | + | chr1.2:25921009-25921028 | None:intergenic | 20.0% |
| !! | ATTTCCTTTACAAGTTATAT+AGG | - | chr1.2:25917951-25917970 | MS.gene053338:intron | 20.0% |
| !! | GCATAAGATATTTATGAATT+GGG | + | chr1.2:25918186-25918205 | None:intergenic | 20.0% |
| !! | GTGGTAATCTTTATATAATT+TGG | + | chr1.2:25919560-25919579 | None:intergenic | 20.0% |
| !! | TAAAATCATAATACCATACA+GGG | + | chr1.2:25921125-25921144 | None:intergenic | 20.0% |
| !! | TAAAGATATGTATAAATAGG+AGG | - | chr1.2:25921388-25921407 | MS.gene053338:intron | 20.0% |
| !! | TAGGGAAAATATTAGTTAAT+GGG | - | chr1.2:25921360-25921379 | MS.gene053338:intron | 20.0% |
| !! | TGATCAAAAGTTAAGAAAAA+AGG | + | chr1.2:25918504-25918523 | None:intergenic | 20.0% |
| !! | TTAAAATCATAATACCATAC+AGG | + | chr1.2:25921126-25921145 | None:intergenic | 20.0% |
| !! | TTAGGGAAAATATTAGTTAA+TGG | - | chr1.2:25921359-25921378 | MS.gene053338:intron | 20.0% |
| !!! | AAGTTAGAATTTGTAGATTT+TGG | - | chr1.2:25917259-25917278 | MS.gene053338:CDS | 20.0% |
| !!! | AATCAATTTGGTTTTATACT+CGG | + | chr1.2:25919658-25919677 | None:intergenic | 20.0% |
| !!! | TATTTTTTTAGCAAATTGAG+TGG | - | chr1.2:25918111-25918130 | MS.gene053338:intron | 20.0% |
| !!! | TGTATTTTGAATGGAAATAA+TGG | + | chr1.2:25921719-25921738 | None:intergenic | 20.0% |
| ! | AAAAAAATAGTGAGAATCAG+AGG | + | chr1.2:25921607-25921626 | None:intergenic | 25.0% |
| ! | AAAAAATAGTGAGAATCAGA+GGG | + | chr1.2:25921606-25921625 | None:intergenic | 25.0% |
| ! | AAAACTACGGATAATCAATT+TGG | + | chr1.2:25919670-25919689 | None:intergenic | 25.0% |
| ! | AAATAAGTGCATCCAAAAAA+GGG | + | chr1.2:25922131-25922150 | None:intergenic | 25.0% |
| ! | AACTTATGAAAACAGCTTAT+AGG | - | chr1.2:25916820-25916839 | MS.gene053338:intron | 25.0% |
| ! | AAGAAAAAGAAGACATTGAT+AGG | + | chr1.2:25919298-25919317 | None:intergenic | 25.0% |
| ! | AAGGTAAAGTGATTTATGAT+TGG | + | chr1.2:25917345-25917364 | None:intergenic | 25.0% |
| ! | AATTACCAAACAAATAGCTT+AGG | - | chr1.2:25920285-25920304 | MS.gene053338:intron | 25.0% |
| ! | ACCTTATCAATATTCACAAT+TGG | + | chr1.2:25920958-25920977 | None:intergenic | 25.0% |
| ! | AGCATTAATTGTTGAATTTG+GGG | + | chr1.2:25920574-25920593 | None:intergenic | 25.0% |
| ! | AGTAAATGGAGTATACAATT+TGG | + | chr1.2:25921648-25921667 | None:intergenic | 25.0% |
| ! | ATAGGATAAAGAGTTAGTTA+GGG | - | chr1.2:25921342-25921361 | MS.gene053338:intron | 25.0% |
| ! | ATATAAAGATTACCACTATG+TGG | - | chr1.2:25919564-25919583 | MS.gene053338:CDS | 25.0% |
| ! | ATTGTATTATAGTGTGGATT+AGG | + | chr1.2:25919770-25919789 | None:intergenic | 25.0% |
| ! | ATTTATATGATAACCACTTG+GGG | - | chr1.2:25916903-25916922 | MS.gene053338:intron | 25.0% |
| ! | CAATAACTAAAACAATTAGC+AGG | + | chr1.2:25918732-25918751 | None:intergenic | 25.0% |
| ! | CAATTAAATTAAAACCCGAA+TGG | - | chr1.2:25918304-25918323 | MS.gene053338:intron | 25.0% |
| ! | CATTTATATGATAACCACTT+GGG | - | chr1.2:25916902-25916921 | MS.gene053338:intron | 25.0% |
| ! | CCAAGTACAAAATTCATAAA+AGG | + | chr1.2:25920189-25920208 | None:intergenic | 25.0% |
| ! | CCTTATCAATATTCACAATT+GGG | + | chr1.2:25920957-25920976 | None:intergenic | 25.0% |
| ! | CGTCATTTCTTAGAAAATAT+AGG | + | chr1.2:25919493-25919512 | None:intergenic | 25.0% |
| ! | CTAAATATACTTGCACATTT+GGG | - | chr1.2:25921050-25921069 | MS.gene053338:intron | 25.0% |
| ! | CTTATCAATATTCACAATTG+GGG | + | chr1.2:25920956-25920975 | None:intergenic | 25.0% |
| ! | GAGCATTAATTGTTGAATTT+GGG | + | chr1.2:25920575-25920594 | None:intergenic | 25.0% |
| ! | GAGTTATTTGTATGACAAAA+AGG | - | chr1.2:25920504-25920523 | MS.gene053338:intron | 25.0% |
| ! | TAAATAAGTGCATCCAAAAA+AGG | + | chr1.2:25922132-25922151 | None:intergenic | 25.0% |
| ! | TATAAAGATTACCACTATGT+GGG | - | chr1.2:25919565-25919584 | MS.gene053338:CDS | 25.0% |
| ! | TATAGGATAAAGAGTTAGTT+AGG | - | chr1.2:25921341-25921360 | MS.gene053338:intron | 25.0% |
| ! | TATTCAAAAACTAGAGGTTT+CGG | + | chr1.2:25919195-25919214 | None:intergenic | 25.0% |
| ! | TCACAAAATTTCATATGTGT+CGG | + | chr1.2:25919062-25919081 | None:intergenic | 25.0% |
| ! | TCTAAATATACTTGCACATT+TGG | - | chr1.2:25921049-25921068 | MS.gene053338:intron | 25.0% |
| ! | TCTATTCGATCAATTCTTAT+TGG | - | chr1.2:25921813-25921832 | MS.gene053338:intron | 25.0% |
| ! | TCTTAGTTCATTAATTACGA+AGG | - | chr1.2:25921304-25921323 | MS.gene053338:intron | 25.0% |
| ! | TGAAAAAGAAACCAAAACTA+CGG | + | chr1.2:25919683-25919702 | None:intergenic | 25.0% |
| ! | TGGATAAATTCATGTAAAAG+TGG | + | chr1.2:25917325-25917344 | None:intergenic | 25.0% |
| ! | TTACTCACTTAACAAAGTAA+CGG | - | chr1.2:25920045-25920064 | MS.gene053338:intron | 25.0% |
| ! | TTATAGCATAAGTGAATGTT+TGG | + | chr1.2:25917438-25917457 | None:intergenic | 25.0% |
| ! | TTATCAATATTCACAATTGG+GGG | + | chr1.2:25920955-25920974 | None:intergenic | 25.0% |
| !! | AAATTGATTATCCGTAGTTT+TGG | - | chr1.2:25919669-25919688 | MS.gene053338:intron | 25.0% |
| !! | AGAAAATTCATTTTATGCAC+TGG | - | chr1.2:25917665-25917684 | MS.gene053338:intron | 25.0% |
| !! | AGAGCATTAATTGTTGAATT+TGG | + | chr1.2:25920576-25920595 | None:intergenic | 25.0% |
| !! | ATATGAAATTTTGTGAAGCA+CGG | - | chr1.2:25919066-25919085 | MS.gene053338:intron | 25.0% |
| !! | CCTTTTATGAATTTTGTACT+TGG | - | chr1.2:25920186-25920205 | MS.gene053338:CDS | 25.0% |
| !! | GAAAATTCATTTTATGCACT+GGG | - | chr1.2:25917666-25917685 | MS.gene053338:intron | 25.0% |
| !! | GATTTATACTTTCTTTTCCA+TGG | - | chr1.2:25921544-25921563 | MS.gene053338:intron | 25.0% |
| !! | TAACTTTTGTGTGTGATTTT+TGG | + | chr1.2:25920381-25920400 | None:intergenic | 25.0% |
| !! | TCTCATTACTTTCTGTATTT+TGG | - | chr1.2:25920642-25920661 | MS.gene053338:intron | 25.0% |
| !!! | TGTATGTTTGGTTTCAATTT+TGG | - | chr1.2:25917136-25917155 | MS.gene053338:intron | 25.0% |
| !!! | TGTCTTTAGAATTTTCGTTA+GGG | - | chr1.2:25921783-25921802 | MS.gene053338:intron | 25.0% |
| !!! | TTGTCTTTAGAATTTTCGTT+AGG | - | chr1.2:25921782-25921801 | MS.gene053338:intron | 25.0% |
| !!! | TTTCTGACATTTTGTTTTTC+AGG | + | chr1.2:25920618-25920637 | None:intergenic | 25.0% |
| !!! | TTTTCTAAGAAATGACGTAT+CGG | - | chr1.2:25919496-25919515 | MS.gene053338:intron | 25.0% |
| AAAATTGAGTCTGGCTAAAA+GGG | + | chr1.2:25917373-25917392 | None:intergenic | 30.0% | |
| AACACATTCAAAACTGAACA+GGG | - | chr1.2:25920538-25920557 | MS.gene053338:intron | 30.0% | |
| AAGAAATCAAAAGTTACCTG+TGG | + | chr1.2:25921288-25921307 | None:intergenic | 30.0% | |
| AAGTTATCATGGATAGCTTA+TGG | + | chr1.2:25916805-25916824 | None:intergenic | 30.0% | |
| AATGATATGAGTAGACAGAT+AGG | + | chr1.2:25920732-25920751 | None:intergenic | 30.0% | |
| AATGCTCTTAATCTAATCCA+AGG | - | chr1.2:25920440-25920459 | MS.gene053338:intron | 30.0% | |
| ACAAAAAGCAAGGTTGTTTA+AGG | - | chr1.2:25919992-25920011 | MS.gene053338:intron | 30.0% | |
| ACAAAATCTACTAATCTGCA+AGG | + | chr1.2:25917579-25917598 | None:intergenic | 30.0% | |
| ACAAAATTCATAAAAGGAGC+CGG | + | chr1.2:25920183-25920202 | None:intergenic | 30.0% | |
| ACAATTGTACTAACCAATTC+AGG | + | chr1.2:25918954-25918973 | None:intergenic | 30.0% | |
| ACTCCATTTACTTTGACAAA+TGG | - | chr1.2:25921656-25921675 | MS.gene053338:intron | 30.0% | |
| AGTCAAATACAACATGAAAG+TGG | + | chr1.2:25918053-25918072 | None:intergenic | 30.0% | |
| AGTTTACTTTCTTCCTGATA+AGG | - | chr1.2:25920906-25920925 | MS.gene053338:intron | 30.0% | |
| ATTCCCAGTTCAAATGAAAA+GGG | - | chr1.2:25922078-25922097 | MS.gene053338:CDS | 30.0% | |
| ATTGGTTAGTACAATTGTTC+TGG | - | chr1.2:25918956-25918975 | MS.gene053338:intron | 30.0% | |
| ATTTACTTTGACAAATGGAG+AGG | - | chr1.2:25921661-25921680 | MS.gene053338:intron | 30.0% | |
| CCCAATTGTGAATATTGATA+AGG | - | chr1.2:25920954-25920973 | MS.gene053338:intron | 30.0% | |
| CTTAAAATAAGGTTCTGTCT+GGG | - | chr1.2:25920312-25920331 | MS.gene053338:intron | 30.0% | |
| CTTCAGTGTATCTAAATGTT+TGG | + | chr1.2:25918931-25918950 | None:intergenic | 30.0% | |
| GCATTTATATGATAACCACT+TGG | - | chr1.2:25916901-25916920 | MS.gene053338:intron | 30.0% | |
| GCTAGAAGCTAATTCAAAAT+AGG | + | chr1.2:25917604-25917623 | None:intergenic | 30.0% | |
| GCTTAATTAAGTAGGAAAAG+TGG | - | chr1.2:25917512-25917531 | MS.gene053338:CDS | 30.0% | |
| GCTTAGGAACTCTTAAAATA+AGG | - | chr1.2:25920301-25920320 | MS.gene053338:intron | 30.0% | |
| GGATTGAACAATAAAACTCA+AGG | + | chr1.2:25917304-25917323 | None:intergenic | 30.0% | |
| GTGGTTAATCAATATTGACA+TGG | + | chr1.2:25918034-25918053 | None:intergenic | 30.0% | |
| TAAAATTGAGTCTGGCTAAA+AGG | + | chr1.2:25917374-25917393 | None:intergenic | 30.0% | |
| TACATCATCATATCGTTTCA+TGG | + | chr1.2:25918457-25918476 | None:intergenic | 30.0% | |
| TAGCAAAAACACAAAAAGCA+AGG | - | chr1.2:25919982-25920001 | MS.gene053338:intron | 30.0% | |
| TATCAATAGAGTAGTTGAAG+AGG | + | chr1.2:25919234-25919253 | None:intergenic | 30.0% | |
| TATTCCCAGTTCAAATGAAA+AGG | - | chr1.2:25922077-25922096 | MS.gene053338:CDS | 30.0% | |
| TCAAAATACAAGTTCTGTGA+AGG | - | chr1.2:25921729-25921748 | MS.gene053338:intron | 30.0% | |
| TCAATACTTCTTGACTTTGT+GGG | + | chr1.2:25918824-25918843 | None:intergenic | 30.0% | |
| TCTCCATTTGTCAAAGTAAA+TGG | + | chr1.2:25921662-25921681 | None:intergenic | 30.0% | |
| TCTTAAAATAAGGTTCTGTC+TGG | - | chr1.2:25920311-25920330 | MS.gene053338:intron | 30.0% | |
| TGAAACCAAACATACACTAA+GGG | + | chr1.2:25917132-25917151 | None:intergenic | 30.0% | |
| TGATCTTGTAAAATTGAGTC+TGG | + | chr1.2:25917382-25917401 | None:intergenic | 30.0% | |
| TGTTATTCATAAGCTTGTCA+AGG | - | chr1.2:25916975-25916994 | MS.gene053338:intron | 30.0% | |
| TTAAAATAAGGTTCTGTCTG+GGG | - | chr1.2:25920313-25920332 | MS.gene053338:intron | 30.0% | |
| TTCAATACTTCTTGACTTTG+TGG | + | chr1.2:25918825-25918844 | None:intergenic | 30.0% | |
| TTCCATAAAAATCACTGTCA+CGG | - | chr1.2:25917872-25917891 | MS.gene053338:intron | 30.0% | |
| TTGAAACCAAACATACACTA+AGG | + | chr1.2:25917133-25917152 | None:intergenic | 30.0% | |
| TTGTCAAACAGTGACTATAT+CGG | - | chr1.2:25918527-25918546 | MS.gene053338:intron | 30.0% | |
| TTTAACAACCCATGAAAGAA+TGG | + | chr1.2:25919807-25919826 | None:intergenic | 30.0% | |
| TTTAGCAAATTGAGTGGTTT+CGG | - | chr1.2:25918117-25918136 | MS.gene053338:intron | 30.0% | |
| TTTATATGCATGTTCTTTGC+TGG | - | chr1.2:25919364-25919383 | MS.gene053338:intron | 30.0% | |
| TTTCACTTGATTCTGTTGTT+GGG | - | chr1.2:25916508-25916527 | MS.gene053338:intron | 30.0% | |
| ! | AATAAACCACAATTTTCGCA+CGG | + | chr1.2:25922061-25922080 | None:intergenic | 30.0% |
| ! | AGGTGCTTGATTTGAATTTA+TGG | + | chr1.2:25920227-25920246 | None:intergenic | 30.0% |
| ! | CACTCCTATATAACTTGTAA+AGG | + | chr1.2:25917958-25917977 | None:intergenic | 30.0% |
| ! | GGTGCTTGATTTGAATTTAT+GGG | + | chr1.2:25920226-25920245 | None:intergenic | 30.0% |
| ! | GTCAATGTCTAGAATAATGT+TGG | - | chr1.2:25919954-25919973 | MS.gene053338:intron | 30.0% |
| ! | TAAAAAGTGTGGGATTTGAA+GGG | + | chr1.2:25916428-25916447 | None:intergenic | 30.0% |
| ! | TGGATAAGCAATGATGTTTT+TGG | + | chr1.2:25921268-25921287 | None:intergenic | 30.0% |
| ! | TTCTTTAAAAGGTGATTGAG+CGG | + | chr1.2:25919712-25919731 | None:intergenic | 30.0% |
| ! | TTTTAATAAAACCCGTATCC+CGG | - | chr1.2:25920161-25920180 | MS.gene053338:CDS | 30.0% |
| ! | TTTTCACTTGATTCTGTTGT+TGG | - | chr1.2:25916507-25916526 | MS.gene053338:intron | 30.0% |
| !! | AATTCTTATTGGTTCCTCTA+AGG | - | chr1.2:25921824-25921843 | MS.gene053338:intron | 30.0% |
| !! | AGAGTTGATTTTGACATGTT+TGG | - | chr1.2:25917186-25917205 | MS.gene053338:CDS | 30.0% |
| !! | ATGTTTGGTTTCAATTTTGG+TGG | - | chr1.2:25917139-25917158 | MS.gene053338:intron | 30.0% |
| !! | CACAGAACTTGTATTTTGAA+TGG | + | chr1.2:25921728-25921747 | None:intergenic | 30.0% |
| !! | GCTGTTTTCATAAGTTATCA+TGG | + | chr1.2:25916816-25916835 | None:intergenic | 30.0% |
| !! | TGTTTGGTTTCAATTTTGGT+GGG | - | chr1.2:25917140-25917159 | MS.gene053338:intron | 30.0% |
| !! | TTATAGTGTGGATTAGGAAT+TGG | + | chr1.2:25919764-25919783 | None:intergenic | 30.0% |
| !!! | ATGTGCATGTCTTTTTTTAG+TGG | - | chr1.2:25921758-25921777 | MS.gene053338:intron | 30.0% |
| !!! | GGATACGGGTTTTATTAAAA+AGG | + | chr1.2:25920161-25920180 | None:intergenic | 30.0% |
| !!! | GGTTTTATTAAAAAGGTGCA+GGG | + | chr1.2:25920154-25920173 | None:intergenic | 30.0% |
| !!! | TAAGTGAATGTTTGGTTTTG+CGG | + | chr1.2:25917430-25917449 | None:intergenic | 30.0% |
| !!! | TGGCATTGTCATCTTATTTT+CGG | - | chr1.2:25917782-25917801 | MS.gene053338:intron | 30.0% |
| AAACATCATTGCTTATCCAC+AGG | - | chr1.2:25921269-25921288 | MS.gene053338:intron | 35.0% | |
| AAACTCACATTGAAAGCTTC+CGG | - | chr1.2:25919863-25919882 | MS.gene053338:intron | 35.0% | |
| AATCAGAGGGATAAAAGAGA+AGG | + | chr1.2:25921593-25921612 | None:intergenic | 35.0% | |
| ACGTATCATAACAGATACGT+TGG | - | chr1.2:25919133-25919152 | MS.gene053338:intron | 35.0% | |
| ACTCAATAAAGTTCCCTGTA+TGG | - | chr1.2:25921109-25921128 | MS.gene053338:intron | 35.0% | |
| ACTTGAGAACTCTTAAAGTG+AGG | + | chr1.2:25920247-25920266 | None:intergenic | 35.0% | |
| AGTCTCACAAGTGTTTATGT+CGG | + | chr1.2:25916718-25916737 | None:intergenic | 35.0% | |
| ATTAAAACCCGAATGGGAAA+AGG | - | chr1.2:25918311-25918330 | MS.gene053338:intron | 35.0% | |
| CAAAATTCATAAAAGGAGCC+GGG | + | chr1.2:25920182-25920201 | None:intergenic | 35.0% | |
| CAACACATTCAAAACTGAAC+AGG | - | chr1.2:25920537-25920556 | MS.gene053338:intron | 35.0% | |
| CCTATATTGTCTTCTGTAGA+AGG | + | chr1.2:25921507-25921526 | None:intergenic | 35.0% | |
| CCTTCTACAGAAGACAATAT+AGG | - | chr1.2:25921504-25921523 | MS.gene053338:intron | 35.0% | |
| CGTATCATAACAGATACGTT+GGG | - | chr1.2:25919134-25919153 | MS.gene053338:intron | 35.0% | |
| CTATACTCAAGCCATCAAAA+AGG | - | chr1.2:25916401-25916420 | MS.gene053338:CDS | 35.0% | |
| GAGTTCCTAAGCTATTTGTT+TGG | + | chr1.2:25920293-25920312 | None:intergenic | 35.0% | |
| GGAATTCTCTCTTTAAACTC+CGG | + | chr1.2:25917917-25917936 | None:intergenic | 35.0% | |
| GGAGTTACGTATTTAAACTG+TGG | - | chr1.2:25918138-25918157 | MS.gene053338:intron | 35.0% | |
| GTTTGAATTCCACTACACTA+CGG | + | chr1.2:25918649-25918668 | None:intergenic | 35.0% | |
| TAAAATAAGGTTCTGTCTGG+GGG | - | chr1.2:25920314-25920333 | MS.gene053338:intron | 35.0% | |
| TAGTAGAGAATCAGCATAAC+CGG | - | chr1.2:25917895-25917914 | MS.gene053338:intron | 35.0% | |
| TATGAGATCGAATGTTGACA+TGG | - | chr1.2:25918905-25918924 | MS.gene053338:intron | 35.0% | |
| ! | AAGAGCTATTTGGTTTCGAA+AGG | + | chr1.2:25917727-25917746 | None:intergenic | 35.0% |
| ! | AGAGCTATTTGGTTTCGAAA+GGG | + | chr1.2:25917726-25917745 | None:intergenic | 35.0% |
| ! | AGATCTTACCTTTTCCCATT+CGG | + | chr1.2:25918322-25918341 | None:intergenic | 35.0% |
| ! | ATTATGTGGCTTTTGTCAGA+GGG | - | chr1.2:25920096-25920115 | MS.gene053338:intron | 35.0% |
| ! | ATTTGAAGGGTCCTTTTTGA+TGG | + | chr1.2:25916415-25916434 | None:intergenic | 35.0% |
| ! | CATTGTGGTTTTCTTGATCT+GGG | - | chr1.2:25916560-25916579 | MS.gene053338:intron | 35.0% |
| ! | CTAAAAAGTGTGGGATTTGA+AGG | + | chr1.2:25916429-25916448 | None:intergenic | 35.0% |
| ! | CTTTTGGATTTTAAACTCCC+CGG | - | chr1.2:25919914-25919933 | MS.gene053338:intron | 35.0% |
| ! | GCTAAAGCGCTTAATTAAGT+AGG | - | chr1.2:25917504-25917523 | MS.gene053338:CDS | 35.0% |
| ! | GCTTGATTTGAATTTATGGG+AGG | + | chr1.2:25920223-25920242 | None:intergenic | 35.0% |
| ! | GGGAGTTTAAAATCCAAAAG+TGG | + | chr1.2:25919914-25919933 | None:intergenic | 35.0% |
| ! | TACCGTGACAGTGATTTTTA+TGG | + | chr1.2:25917877-25917896 | None:intergenic | 35.0% |
| ! | TGGCAAAAAGTAACCACTTT+TGG | - | chr1.2:25919898-25919917 | MS.gene053338:intron | 35.0% |
| ! | TGTCCCTTTTCATTTGAACT+GGG | + | chr1.2:25922084-25922103 | None:intergenic | 35.0% |
| ! | TTTGACTGAGTTGAGACTTA+CGG | - | chr1.2:25917828-25917847 | MS.gene053338:intron | 35.0% |
| ! | TTTGGGATAATCTTTCTCGT+TGG | - | chr1.2:25921067-25921086 | MS.gene053338:intron | 35.0% |
| !! | CTTCAAATCCCACACTTTTT+AGG | - | chr1.2:25916427-25916446 | MS.gene053338:CDS | 35.0% |
| !! | GTTGTTTTGTCATTGCATTG+TGG | - | chr1.2:25916545-25916564 | MS.gene053338:intron | 35.0% |
| !! | GTTTGGTTTCAATTTTGGTG+GGG | - | chr1.2:25917141-25917160 | MS.gene053338:intron | 35.0% |
| !! | TAATCTTTCTCGTTGGCTTA+TGG | - | chr1.2:25921074-25921093 | MS.gene053338:intron | 35.0% |
| !! | TTGACAACACTGCTTTTGAT+TGG | - | chr1.2:25918695-25918714 | MS.gene053338:intron | 35.0% |
| !!! | AAATCCCACACTTTTTAGGT+AGG | - | chr1.2:25916431-25916450 | MS.gene053338:CDS | 35.0% |
| !!! | ACGTTGATTTTGATACTCTC+CGG | + | chr1.2:25919936-25919955 | None:intergenic | 35.0% |
| !!! | GGGTTTTATTAAAAAGGTGC+AGG | + | chr1.2:25920155-25920174 | None:intergenic | 35.0% |
| AAAAATACATGACCCATCCC+AGG | + | chr1.2:25921862-25921881 | None:intergenic | 40.0% | |
| AACAACCCATGAAAGAATGG+CGG | + | chr1.2:25919804-25919823 | None:intergenic | 40.0% | |
| AACTCACATTGAAAGCTTCC+GGG | - | chr1.2:25919864-25919883 | MS.gene053338:intron | 40.0% | |
| AAGCATAAAGCTAGCATCCA+TGG | + | chr1.2:25921564-25921583 | None:intergenic | 40.0% | |
| AAGTGATCGAAGGCTCTATT+TGG | + | chr1.2:25917482-25917501 | None:intergenic | 40.0% | |
| AAGTGCATCCAAAAAAGGGT+GGG | + | chr1.2:25922127-25922146 | None:intergenic | 40.0% | |
| ACATGCCCTTAGTGTATGTT+TGG | - | chr1.2:25917124-25917143 | MS.gene053338:intron | 40.0% | |
| AGAGGGATAAAAGAGAAGGA+AGG | + | chr1.2:25921589-25921608 | None:intergenic | 40.0% | |
| AGAGTTCTCAAGTGAAGAGT+TGG | - | chr1.2:25920254-25920273 | MS.gene053338:intron | 40.0% | |
| AGATACACTGAAGCCTGAAT+TGG | - | chr1.2:25918938-25918957 | MS.gene053338:intron | 40.0% | |
| AGATTACCACTATGTGGGAT+TGG | - | chr1.2:25919570-25919589 | MS.gene053338:CDS | 40.0% | |
| AGCCACATAATGATTTGACG+TGG | + | chr1.2:25920087-25920106 | None:intergenic | 40.0% | |
| AGCTATCTGAAAGGAAGCTA+AGG | + | chr1.2:25918790-25918809 | None:intergenic | 40.0% | |
| AGGCCTACAAATATTCACAC+AGG | + | chr1.2:25918770-25918789 | None:intergenic | 40.0% | |
| AGGTGAGTCTGTTAGGTTAT+AGG | - | chr1.2:25921324-25921343 | MS.gene053338:intron | 40.0% | |
| AGTATGGATCTGAAGAAAGC+TGG | - | chr1.2:25920803-25920822 | MS.gene053338:intron | 40.0% | |
| AGTTATTCAGATTGTGCGAG+AGG | - | chr1.2:25921426-25921445 | MS.gene053338:intron | 40.0% | |
| ATACTGCGAAGCTATCTGAA+AGG | + | chr1.2:25918799-25918818 | None:intergenic | 40.0% | |
| ATCTAACCAATCCCACATAG+TGG | + | chr1.2:25919579-25919598 | None:intergenic | 40.0% | |
| ATGGCATGAAACTTCTTCAG+TGG | - | chr1.2:25920876-25920895 | MS.gene053338:intron | 40.0% | |
| ATTACGAAGGTGAGTCTGTT+AGG | - | chr1.2:25921317-25921336 | MS.gene053338:intron | 40.0% | |
| CAATGCCATTGTTTAGCAGT+AGG | + | chr1.2:25917770-25917789 | None:intergenic | 40.0% | |
| CACATAATGATTTGACGTGG+TGG | + | chr1.2:25920084-25920103 | None:intergenic | 40.0% | |
| CACCACGTCAAATCATTATG+TGG | - | chr1.2:25920082-25920101 | MS.gene053338:intron | 40.0% | |
| CATGCTAGTTGAGCACTATT+AGG | + | chr1.2:25918989-25919008 | None:intergenic | 40.0% | |
| CTCTTGCAGTCTGAAAAGTA+TGG | - | chr1.2:25920787-25920806 | MS.gene053338:intron | 40.0% | |
| CTGCAAAGCAAAGAGCTATT+TGG | + | chr1.2:25917737-25917756 | None:intergenic | 40.0% | |
| GATACTTACCAGACACGATA+CGG | + | chr1.2:25919109-25919128 | None:intergenic | 40.0% | |
| GATCTCCTACTGCTAAACAA+TGG | - | chr1.2:25917762-25917781 | MS.gene053338:intron | 40.0% | |
| GCTTTAGCATAAGTGATCGA+AGG | + | chr1.2:25917492-25917511 | None:intergenic | 40.0% | |
| GGATCTTTACTCTAGCTACA+TGG | - | chr1.2:25921682-25921701 | MS.gene053338:intron | 40.0% | |
| GTAAGTCTCAACTCAGTCAA+AGG | + | chr1.2:25917829-25917848 | None:intergenic | 40.0% | |
| GTGCCTGTGTGAATATTTGT+AGG | - | chr1.2:25918764-25918783 | MS.gene053338:intron | 40.0% | |
| TAAGGTTCTCTACTATGCCT+GGG | - | chr1.2:25921842-25921861 | MS.gene053338:intron | 40.0% | |
| TAAGTGCATCCAAAAAAGGG+TGG | + | chr1.2:25922128-25922147 | None:intergenic | 40.0% | |
| TCAACTCAGTCAAAGGCTTT+GGG | + | chr1.2:25917822-25917841 | None:intergenic | 40.0% | |
| TCTGCTTGAATACACTTCCA+GGG | - | chr1.2:25918402-25918421 | MS.gene053338:intron | 40.0% | |
| TGGAGACTGCTGTAAAATCA+TGG | - | chr1.2:25920857-25920876 | MS.gene053338:intron | 40.0% | |
| TTCTGCTTGAATACACTTCC+AGG | - | chr1.2:25918401-25918420 | MS.gene053338:intron | 40.0% | |
| TTTATACTCGGTAGATCACC+AGG | + | chr1.2:25919646-25919665 | None:intergenic | 40.0% | |
| TTTCTCCGCCATTCTTTCAT+GGG | - | chr1.2:25919796-25919815 | MS.gene053338:intron | 40.0% | |
| ! | ACATACACTAAGGGCATGTT+TGG | + | chr1.2:25917123-25917142 | None:intergenic | 40.0% |
| ! | CATACTTTTCAGACTGCAAG+AGG | + | chr1.2:25920789-25920808 | None:intergenic | 40.0% |
| ! | CATTATGTGGCTTTTGTCAG+AGG | - | chr1.2:25920095-25920114 | MS.gene053338:intron | 40.0% |
| ! | CTGTCCCTTTTCATTTGAAC+TGG | + | chr1.2:25922085-25922104 | None:intergenic | 40.0% |
| ! | GAGATGTCTTTGAAGGATCA+AGG | - | chr1.2:25916333-25916352 | MS.gene053338:CDS | 40.0% |
| ! | GATCTTACCTTTTCCCATTC+GGG | + | chr1.2:25918321-25918340 | None:intergenic | 40.0% |
| ! | GCATTGTGGTTTTCTTGATC+TGG | - | chr1.2:25916559-25916578 | MS.gene053338:intron | 40.0% |
| ! | GGTACCTACCTAAAAAGTGT+GGG | + | chr1.2:25916438-25916457 | None:intergenic | 40.0% |
| ! | TGATTTTACAGCAGTCTCCA+TGG | + | chr1.2:25920857-25920876 | None:intergenic | 40.0% |
| ! | TGTGTCTCATTCCATTTTCC+AGG | - | chr1.2:25921149-25921168 | MS.gene053338:intron | 40.0% |
| ! | TTTTCTCCGCCATTCTTTCA+TGG | - | chr1.2:25919795-25919814 | MS.gene053338:intron | 40.0% |
| !! | AAGCTCTGAGATGTCTTTGA+AGG | - | chr1.2:25916326-25916345 | MS.gene053338:CDS | 40.0% |
| !! | ACTATGTGGGATTGGTTAGA+TGG | - | chr1.2:25919578-25919597 | MS.gene053338:CDS | 40.0% |
| !! | ACTGCTTTTGATTGGAAGCT+GGG | - | chr1.2:25918703-25918722 | MS.gene053338:intron | 40.0% |
| !! | AGGAAATGAAAAGTACTCGC+TGG | + | chr1.2:25917938-25917957 | None:intergenic | 40.0% |
| !! | CAACTTGTTGCTACGAATGA+TGG | + | chr1.2:25919619-25919638 | None:intergenic | 40.0% |
| !! | CTTCTGTAGAAGGCACTATT+AGG | + | chr1.2:25921497-25921516 | None:intergenic | 40.0% |
| !! | GCAGCTGTTTTCCATTTCTT+AGG | - | chr1.2:25921196-25921215 | MS.gene053338:intron | 40.0% |
| !! | GCTTGCTATCTTTCACTAGT+TGG | + | chr1.2:25918866-25918885 | None:intergenic | 40.0% |
| !! | GTGTGGATTAGGAATTGGAA+TGG | + | chr1.2:25919759-25919778 | None:intergenic | 40.0% |
| !! | GTTGATTTTGATACTCTCCG+GGG | + | chr1.2:25919934-25919953 | None:intergenic | 40.0% |
| !!! | CGTTGATTTTGATACTCTCC+GGG | + | chr1.2:25919935-25919954 | None:intergenic | 40.0% |
| !!! | GGTAACGAGTTTTTCAAGTC+AGG | - | chr1.2:25916354-25916373 | MS.gene053338:CDS | 40.0% |
| AAAAGGGACAGATACTGTGC+AGG | - | chr1.2:25922094-25922113 | MS.gene053338:CDS | 45.0% | |
| AAACAGCTGCTGTGTGTTTC+TGG | + | chr1.2:25921186-25921205 | None:intergenic | 45.0% | |
| AACAACATTCTGTGTCTGCC+AGG | - | chr1.2:25921960-25921979 | MS.gene053338:intron | 45.0% | |
| AAGGCCAAGGATCAAGGAAA+TGG | - | chr1.2:25921989-25922008 | MS.gene053338:intron | 45.0% | |
| ACATGCGAGTGGCGTTAAAT+TGG | - | chr1.2:25920015-25920034 | MS.gene053338:CDS | 45.0% | |
| ATTTCTTAGGCAGTATGCCG+AGG | - | chr1.2:25921209-25921228 | MS.gene053338:intron | 45.0% | |
| CAAAACAGAGCACAAGCCAT+TGG | + | chr1.2:25919165-25919184 | None:intergenic | 45.0% | |
| CATGCGAGTGGCGTTAAATT+GGG | - | chr1.2:25920016-25920035 | MS.gene053338:CDS | 45.0% | |
| CTAAGGTTCTCTACTATGCC+TGG | - | chr1.2:25921841-25921860 | MS.gene053338:intron | 45.0% | |
| CTAATCCAAGGTTCGACGAA+TGG | - | chr1.2:25920452-25920471 | MS.gene053338:intron | 45.0% | |
| CTCAACTCAGTCAAAGGCTT+TGG | + | chr1.2:25917823-25917842 | None:intergenic | 45.0% | |
| GCTTCCATTTCCTTGATCCT+TGG | + | chr1.2:25921996-25922015 | None:intergenic | 45.0% | |
| GGCATAGTAGAGAACCTTAG+AGG | + | chr1.2:25921841-25921860 | None:intergenic | 45.0% | |
| GGGTACCTACCTAAAAAGTG+TGG | + | chr1.2:25916439-25916458 | None:intergenic | 45.0% | |
| GTTGTTTAAGGACATGCGAG+TGG | - | chr1.2:25920004-25920023 | MS.gene053338:CDS | 45.0% | |
| TAAGTCCATTCGTCGAACCT+TGG | + | chr1.2:25920460-25920479 | None:intergenic | 45.0% | |
| TACACTTCCAGGGACATTTC+CGG | - | chr1.2:25918412-25918431 | MS.gene053338:intron | 45.0% | |
| TCATAAAAGGAGCCGGGATA+CGG | + | chr1.2:25920176-25920195 | None:intergenic | 45.0% | |
| TCGGCATACTGCCTAAGAAA+TGG | + | chr1.2:25921210-25921229 | None:intergenic | 45.0% | |
| TCTGGCTAAAAGGGAGTTGA+AGG | + | chr1.2:25917364-25917383 | None:intergenic | 45.0% | |
| TGACTCAAAGGCCTGGAAAA+TGG | + | chr1.2:25921163-25921182 | None:intergenic | 45.0% | |
| TGCTCTTGAGAAAGACTCCT+CGG | + | chr1.2:25921229-25921248 | None:intergenic | 45.0% | |
| TGCTGCAGCATTGCTACAAT+TGG | - | chr1.2:25918245-25918264 | MS.gene053338:intron | 45.0% | |
| TTCACACAGGCACATGTATC+AGG | + | chr1.2:25918757-25918776 | None:intergenic | 45.0% | |
| TTCTCTACTATGCCTGGGAT+GGG | - | chr1.2:25921847-25921866 | MS.gene053338:intron | 45.0% | |
| TTTCCGGAAGGGATGCATAT+TGG | - | chr1.2:25918428-25918447 | MS.gene053338:intron | 45.0% | |
| ! | AACCACAATTTTCGCACGGA+AGG | + | chr1.2:25922057-25922076 | None:intergenic | 45.0% |
| ! | CACTAAGGGCATGTTTGGAT+TGG | + | chr1.2:25917118-25917137 | None:intergenic | 45.0% |
| ! | GTCTGCGTCTTTTCCTTATC+AGG | + | chr1.2:25920922-25920941 | None:intergenic | 45.0% |
| ! | TGGAAGCATGCACAGAATGA+TGG | - | chr1.2:25922009-25922028 | MS.gene053338:intron | 45.0% |
| ! | TGGTTTCGAAAGGGTGTACA+CGG | + | chr1.2:25917717-25917736 | None:intergenic | 45.0% |
| ! | TGTTGCTACGAATGATGGAG+CGG | + | chr1.2:25919614-25919633 | None:intergenic | 45.0% |
| !! | CACTGCTTTTGATTGGAAGC+TGG | - | chr1.2:25918702-25918721 | MS.gene053338:intron | 45.0% |
| !! | CAGTCAAAGGCTTTGGGTTA+AGG | + | chr1.2:25917816-25917835 | None:intergenic | 45.0% |
| !! | GTGTGTTTCTGGTGACTCAA+AGG | + | chr1.2:25921175-25921194 | None:intergenic | 45.0% |
| !!! | GGTTACTTTTTGCCACCACT+TGG | + | chr1.2:25919893-25919912 | None:intergenic | 45.0% |
| !!! | GTTTCTCTCCCACCCTTTTT+TGG | - | chr1.2:25922116-25922135 | MS.gene053338:CDS | 45.0% |
| ACACGATACGGCGAGGAAAT+TGG | + | chr1.2:25919097-25919116 | None:intergenic | 50.0% | |
| CAATGCTGCAGCACGATTAC+TGG | + | chr1.2:25918238-25918257 | None:intergenic | 50.0% | |
| CATAAAAGGAGCCGGGATAC+GGG | + | chr1.2:25920175-25920194 | None:intergenic | 50.0% | |
| CCTCCAATATGCATCCCTTC+CGG | + | chr1.2:25918434-25918453 | None:intergenic | 50.0% | |
| CTCCTTCCGTGCGAAAATTG+TGG | - | chr1.2:25922052-25922071 | MS.gene053338:CDS | 50.0% | |
| GATACGTTGGGATGCACCAA+TGG | - | chr1.2:25919146-25919165 | MS.gene053338:intron | 50.0% | |
| GTAGCAACAAGTTGCTGTCC+TGG | - | chr1.2:25919625-25919644 | MS.gene053338:CDS | 50.0% | |
| GTTCTCTACTATGCCTGGGA+TGG | - | chr1.2:25921846-25921865 | MS.gene053338:intron | 50.0% | |
| TAGCAAGCGAGCTCAAGAAG+TGG | - | chr1.2:25918878-25918897 | MS.gene053338:intron | 50.0% | |
| TCACATTGAAAGCTTCCGGG+TGG | - | chr1.2:25919867-25919886 | MS.gene053338:intron | 50.0% | |
| TCTGGAAAGGCCAAGGATCA+AGG | - | chr1.2:25921983-25922002 | MS.gene053338:intron | 50.0% | |
| TTCCAGGGACATTTCCGGAA+GGG | - | chr1.2:25918417-25918436 | MS.gene053338:intron | 50.0% | |
| ! | CGAATGATGGAGCGGTAAGA+AGG | + | chr1.2:25919606-25919625 | None:intergenic | 50.0% |
| ! | GGTTTCGAAAGGGTGTACAC+GGG | + | chr1.2:25917716-25917735 | None:intergenic | 50.0% |
| ! | TTTCTGGTGACTCAAAGGCC+TGG | + | chr1.2:25921170-25921189 | None:intergenic | 50.0% |
| !! | GACGTGGTGGCTTTAGATTG+TGG | + | chr1.2:25920071-25920090 | None:intergenic | 50.0% |
| !!! | GTTTTTGGCAGCCACTAAGC+AGG | + | chr1.2:25921253-25921272 | None:intergenic | 50.0% |
| ATCCCTTCCGGAAATGTCCC+TGG | + | chr1.2:25918422-25918441 | None:intergenic | 55.0% | |
| CATTCTGTGTCTGCCAGGTC+TGG | - | chr1.2:25921965-25921984 | MS.gene053338:intron | 55.0% | |
| CCGGAAGGGATGCATATTGG+AGG | - | chr1.2:25918431-25918450 | MS.gene053338:intron | 55.0% | |
| CTCAAGAGCAGCCTGCTTAG+TGG | - | chr1.2:25921239-25921258 | MS.gene053338:intron | 55.0% | |
| CTCATTCCTCGTCGAGACCA+TGG | - | chr1.2:25920837-25920856 | MS.gene053338:intron | 55.0% | |
| CTTCCAGGGACATTTCCGGA+AGG | - | chr1.2:25918416-25918435 | MS.gene053338:intron | 55.0% | |
| TGTGTCTGCCAGGTCTGGAA+AGG | - | chr1.2:25921970-25921989 | MS.gene053338:intron | 55.0% | |
| TTACCAGACACGATACGGCG+AGG | + | chr1.2:25919104-25919123 | None:intergenic | 55.0% | |
| TTTCCTCGCCGTATCGTGTC+TGG | - | chr1.2:25919098-25919117 | MS.gene053338:intron | 55.0% | |
| ! | ATCCTTGGCCTTTCCAGACC+TGG | + | chr1.2:25921981-25922000 | None:intergenic | 55.0% |
| !! | GCTAGAGCACCGTAGTGTAG+TGG | - | chr1.2:25918637-25918656 | MS.gene053338:intron | 55.0% |
| AAAGCTTCCGGGTGGCCAAG+TGG | - | chr1.2:25919875-25919894 | MS.gene053338:intron | 60.0% | |
| CAGTCTCCATGGTCTCGACG+AGG | + | chr1.2:25920846-25920865 | None:intergenic | 60.0% | |
| CGATCGAAACGTGCCCCAAG+TGG | + | chr1.2:25916919-25916938 | None:intergenic | 60.0% | |
| TGCCAGGTCTGGAAAGGCCA+AGG | - | chr1.2:25921976-25921995 | MS.gene053338:intron | 60.0% | |
| TTTGCCACCACTTGGCCACC+CGG | + | chr1.2:25919885-25919904 | None:intergenic | 60.0% | |
| GCTTCCGGGTGGCCAAGTGG+TGG | - | chr1.2:25919878-25919897 | MS.gene053338:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 25916303 | 25922170 | 25916303 | ID=MS.gene053338 |
| chr1.2 | mRNA | 25916303 | 25922170 | 25916303 | ID=MS.gene053338.t1;Parent=MS.gene053338 |
| chr1.2 | exon | 25922025 | 25922170 | 25922025 | ID=MS.gene053338.t1.exon1;Parent=MS.gene053338.t1 |
| chr1.2 | CDS | 25922025 | 25922170 | 25922025 | ID=cds.MS.gene053338.t1;Parent=MS.gene053338.t1 |
| chr1.2 | exon | 25920141 | 25920234 | 25920141 | ID=MS.gene053338.t1.exon2;Parent=MS.gene053338.t1 |
| chr1.2 | CDS | 25920141 | 25920234 | 25920141 | ID=cds.MS.gene053338.t1;Parent=MS.gene053338.t1 |
| chr1.2 | exon | 25920000 | 25920050 | 25920000 | ID=MS.gene053338.t1.exon3;Parent=MS.gene053338.t1 |
| chr1.2 | CDS | 25920000 | 25920050 | 25920000 | ID=cds.MS.gene053338.t1;Parent=MS.gene053338.t1 |
| chr1.2 | exon | 25919514 | 25919687 | 25919514 | ID=MS.gene053338.t1.exon4;Parent=MS.gene053338.t1 |
| chr1.2 | CDS | 25919514 | 25919687 | 25919514 | ID=cds.MS.gene053338.t1;Parent=MS.gene053338.t1 |
| chr1.2 | exon | 25917498 | 25917677 | 25917498 | ID=MS.gene053338.t1.exon5;Parent=MS.gene053338.t1 |
| chr1.2 | CDS | 25917498 | 25917677 | 25917498 | ID=cds.MS.gene053338.t1;Parent=MS.gene053338.t1 |
| chr1.2 | exon | 25917183 | 25917302 | 25917183 | ID=MS.gene053338.t1.exon6;Parent=MS.gene053338.t1 |
| chr1.2 | CDS | 25917183 | 25917302 | 25917183 | ID=cds.MS.gene053338.t1;Parent=MS.gene053338.t1 |
| chr1.2 | exon | 25916303 | 25916491 | 25916303 | ID=MS.gene053338.t1.exon7;Parent=MS.gene053338.t1 |
| chr1.2 | CDS | 25916303 | 25916491 | 25916303 | ID=cds.MS.gene053338.t1;Parent=MS.gene053338.t1 |
| Gene Sequence |
| Protein sequence |
