AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059288

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059288.t1 MTR_2g087640 98.773 326 4 0 1 326 1 326 0.0 667
MS.gene059288.t1 MTR_2g054920 29.907 321 193 8 3 319 9 301 5.91e-38 138
MS.gene059288.t1 MTR_8g092620 22.397 317 206 9 5 314 13 296 5.37e-16 77.4
MS.gene059288.t1 MTR_8g092620 22.468 316 205 9 5 313 20 302 9.88e-16 77.0
MS.gene059288.t1 MTR_4g095058 25.092 271 135 7 11 229 290 544 1.17e-15 78.2
MS.gene059288.t1 MTR_4g095058 25.092 271 135 7 11 229 288 542 1.22e-15 77.8
MS.gene059288.t1 MTR_7g081695 29.121 182 120 5 141 319 554 729 1.46e-15 77.8
MS.gene059288.t1 MTR_1g072140 24.000 225 156 4 6 227 65 277 2.96e-15 75.5
MS.gene059288.t1 MTR_4g119620 25.676 222 154 3 7 227 75 286 3.06e-15 75.9
MS.gene059288.t1 MTR_4g119620 22.188 320 172 8 6 314 23 276 1.05e-11 65.1
MS.gene059288.t1 MTR_5g016350 26.087 276 134 8 7 229 291 549 1.11e-14 75.1
MS.gene059288.t1 MTR_5g016350 26.087 276 134 8 7 229 227 485 1.98e-14 74.3
MS.gene059288.t1 MTR_8g092620 24.783 230 148 7 5 229 13 222 2.25e-13 68.9
MS.gene059288.t1 MTR_6g005050 93.548 31 2 0 64 94 55 85 4.96e-13 65.9
MS.gene059288.t1 MTR_2g012630 22.697 304 148 7 38 310 1 248 9.29e-12 66.6
MS.gene059288.t1 MTR_7g086360 26.425 193 124 3 118 309 70 245 9.55e-12 65.5
MS.gene059288.t1 MTR_2g012630 22.697 304 148 7 38 310 1 248 1.05e-11 66.2
MS.gene059288.t1 MTR_2g034500 25.424 236 142 6 49 262 238 461 1.34e-11 66.2
MS.gene059288.t1 MTR_5g022690 30.542 203 126 7 58 251 186 382 5.58e-11 63.5
MS.gene059288.t1 MTR_8g028700 25.105 239 158 7 37 272 215 435 9.09e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059288.t1 AT2G46290 79.878 328 64 1 1 326 28 355 0.0 558
MS.gene059288.t1 AT2G46280 80.793 328 61 1 1 326 1 328 0.0 546
MS.gene059288.t1 AT2G46280 80.793 328 61 1 1 326 1 328 0.0 546
MS.gene059288.t1 AT2G46280 75.200 250 60 1 1 248 1 250 1.37e-136 388
MS.gene059288.t1 AT1G15470 30.696 316 187 8 3 314 4 291 5.35e-40 143
MS.gene059288.t1 AT3G15610 29.907 321 193 8 3 319 9 301 1.12e-35 132
MS.gene059288.t1 AT1G52730 30.530 321 191 8 3 319 9 301 1.43e-35 132
MS.gene059288.t1 AT1G52730 30.530 321 191 8 3 319 9 301 1.43e-35 132
MS.gene059288.t1 AT1G15470 28.881 277 177 7 3 275 4 264 4.34e-28 110
MS.gene059288.t1 AT1G52730 28.873 284 170 8 3 282 9 264 2.14e-23 97.4
MS.gene059288.t1 AT5G67320 28.352 261 141 7 11 230 325 580 2.30e-17 83.2
MS.gene059288.t1 AT3G49660 24.434 221 156 3 8 227 69 279 3.94e-15 75.5
MS.gene059288.t1 AT3G49660 24.367 316 166 9 6 314 20 269 5.84e-13 68.9
MS.gene059288.t1 AT5G64730 22.293 314 210 9 5 314 13 296 1.11e-13 70.9
MS.gene059288.t1 AT1G11160 23.158 285 187 9 38 319 1 256 1.55e-13 72.0
MS.gene059288.t1 AT1G11160 23.158 285 187 9 38 319 1 256 1.64e-13 72.0
MS.gene059288.t1 AT1G11160 23.158 285 187 9 38 319 1 256 1.81e-13 71.6
MS.gene059288.t1 AT4G02730 24.116 311 169 8 6 314 39 284 2.00e-13 70.5
MS.gene059288.t1 AT4G02730 25.778 225 151 5 7 227 82 294 1.04e-11 65.5
MS.gene059288.t1 AT5G25150 25.000 188 125 4 41 226 406 579 6.23e-12 67.0
MS.gene059288.t1 AT5G25150 25.000 188 125 4 41 226 406 579 7.03e-12 66.6
MS.gene059288.t1 AT1G15440 24.017 229 155 5 7 232 386 598 1.70e-11 65.9
MS.gene059288.t1 AT1G15440 24.017 229 155 5 7 232 346 558 1.94e-11 65.5
MS.gene059288.t1 AT2G43770 25.946 185 119 3 136 319 86 253 2.00e-11 64.7
MS.gene059288.t1 AT2G43770 21.981 323 168 8 4 314 90 340 5.30e-11 63.2
MS.gene059288.t1 AT2G47410 24.779 226 144 7 15 225 199 413 2.99e-11 65.1
MS.gene059288.t1 AT2G47410 24.779 226 144 7 15 225 200 414 3.05e-11 65.1
MS.gene059288.t1 AT2G47410 24.779 226 144 7 15 225 18 232 3.48e-11 64.7

Find 74 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCACTACCGATCCGTTTA+TGG 0.167131 2.2:-11492027 MS.gene059288:CDS
GGAATCTTTGCTTGTAATTA+AGG 0.177487 2.2:-11491840 MS.gene059288:CDS
AAGATGCTGTCATTCGTATT+TGG 0.183590 2.2:-11491751 MS.gene059288:CDS
TAGATTCTTCAAGAAGAAAT+TGG 0.198485 2.2:-11489612 MS.gene059288:CDS
TCATGGCCTTTCATCAAAAT+TGG 0.284401 2.2:+11492347 None:intergenic
CCTTCAACCCTGATGGAAAA+AGG 0.307173 2.2:-11489551 MS.gene059288:intron
AAGAATCAATAGAGCCATTT+GGG 0.314384 2.2:-11491807 MS.gene059288:CDS
AGATGCTGTCATTCGTATTT+GGG 0.316154 2.2:-11491750 MS.gene059288:CDS
GCCGAGACGTTCACCGTTAT+CGG 0.319305 2.2:+11492238 None:intergenic
CTTACGGTCAGCGGGATCTT+TGG 0.331252 2.2:+11491971 None:intergenic
GATTCCGGTCGGCTTATTAC+TGG 0.335072 2.2:-11492167 MS.gene059288:CDS
TGCGATGTTTCCCGTGATTC+CGG 0.356785 2.2:-11492182 MS.gene059288:CDS
AGATTCTTCAAGAAGAAATT+GGG 0.362725 2.2:-11489611 MS.gene059288:CDS
TTGTACTTGAGATATGTTAA+TGG 0.369742 2.2:+11492320 None:intergenic
ATGTGAACCATCAGCAGATT+TGG 0.370730 2.2:+11490443 None:intergenic
GAAGAATCAATAGAGCCATT+TGG 0.398192 2.2:-11491808 MS.gene059288:CDS
AAAGGAGTCAGACAAGGAAT+TGG 0.401919 2.2:-11490493 MS.gene059288:CDS
GGTGGTACTTGGAGGTGGTC+AGG 0.402861 2.2:-11489785 MS.gene059288:CDS
GAATCTTTGCTTGTAATTAA+GGG 0.404785 2.2:-11491839 MS.gene059288:CDS
TGAAGCCAAGTTCTTTGATA+AGG 0.422484 2.2:-11489719 MS.gene059288:intron
GCTTGTAATTAAGGGACCTC+AGG 0.429732 2.2:-11491831 MS.gene059288:CDS
TTTGTTGAGGGGTCCCCAAA+TGG 0.436857 2.2:+11491793 None:intergenic
AAGATCACAATCCCACCGTT+TGG 0.440928 2.2:-11492265 MS.gene059288:CDS
AGGTCTGTTGATTTCTCTGT+TGG 0.442427 2.2:-11492065 MS.gene059288:CDS
TCCGTTTATGGAACTTTCCT+CGG 0.446652 2.2:-11492015 MS.gene059288:CDS
ACCGTTTGGTTTGCCGATAA+CGG 0.449944 2.2:-11492251 MS.gene059288:CDS
ATCTTCTCCGGCACTGATGA+TGG 0.453608 2.2:+11491769 None:intergenic
TTGTAGGTGGTACTTGGAGG+TGG 0.468354 2.2:-11489790 MS.gene059288:intron
GATGGTTCACATTTCTGCAC+TGG 0.474156 2.2:-11490432 MS.gene059288:CDS
ACCGTTATCGGCAAACCAAA+CGG 0.474756 2.2:+11492250 None:intergenic
ATCTACCTTATCAAAGAACT+TGG 0.474993 2.2:+11489714 None:intergenic
ATACCTTAGCAGACTTATCA+AGG 0.481607 2.2:+11490406 None:intergenic
GCCGAGGAAAGTTCCATAAA+CGG 0.483770 2.2:+11492014 None:intergenic
TAATAAGCCGACCGGAATCA+CGG 0.489640 2.2:+11492171 None:intergenic
TTGAAGGCCAGTGCATTAAT+CGG 0.490242 2.2:+11489567 None:intergenic
AAGGAGTCAGACAAGGAATT+GGG 0.492097 2.2:-11490492 MS.gene059288:CDS
CATTCGTATTTGGGATTCTG+AGG 0.498646 2.2:-11491741 MS.gene059288:intron
AATAAGCCGACCGGAATCAC+GGG 0.509411 2.2:+11492172 None:intergenic
GTGGTCATAACGGTGCTGTT+TGG 0.512777 2.2:-11492208 MS.gene059288:CDS
TATCTCAAGTACAACCTTGA+CGG 0.514822 2.2:-11492311 MS.gene059288:CDS
GCTTGATGCTTACGGTCAGC+GGG 0.515688 2.2:+11491963 None:intergenic
GACATTGTAACCGCATTGAC+AGG 0.522187 2.2:+11490232 None:intergenic
CTCCCTTGATAAGTCTGCTA+AGG 0.544218 2.2:-11490409 MS.gene059288:intron
ACGAATGACAGCATCTTCTC+CGG 0.544600 2.2:+11491757 None:intergenic
AACAAAACCATCATCAGTGC+CGG 0.546750 2.2:-11491776 MS.gene059288:CDS
GCAGACTGGAAAACTACTAA+AGG 0.564946 2.2:-11490511 MS.gene059288:intron
AGCTTGATGCTTACGGTCAG+CGG 0.566022 2.2:+11491962 None:intergenic
GCACTGGCCTTCAACCCTGA+TGG 0.568197 2.2:-11489558 MS.gene059288:CDS
GAGAAATCAACAGACCTAGC+AGG 0.569543 2.2:+11492071 None:intergenic
ACAACAACTGATCATCGTGC+TGG 0.575921 2.2:-11489748 MS.gene059288:CDS
CTTGTAATTAAGGGACCTCA+GGG 0.577207 2.2:-11491830 MS.gene059288:CDS
GCCGATAACGGTGAACGTCT+CGG 0.584577 2.2:-11492239 MS.gene059288:CDS
GGCACTTACCGTGGTCATAA+CGG 0.585784 2.2:-11492218 MS.gene059288:CDS
GATTCTTCAAGAAGAAATTG+GGG 0.586348 2.2:-11489610 MS.gene059288:CDS
ATGTTTCCCGTGATTCCGGT+CGG 0.587403 2.2:-11492178 MS.gene059288:CDS
TCACTCGCCAAATCTGCTGA+TGG 0.591285 2.2:-11490450 MS.gene059288:CDS
GATATGTTAATGGCCTCTCA+TGG 0.594160 2.2:+11492330 None:intergenic
ATACATACATGATCAAGAAG+AGG 0.600564 2.2:+11490208 None:intergenic
AGAAAAGAAGATCGCCGTCA+AGG 0.603229 2.2:+11492297 None:intergenic
ACTGCCAGTAATAAGCCGAC+CGG 0.620174 2.2:+11492163 None:intergenic
GAACGTCTCGGCACTTACCG+TGG 0.630702 2.2:-11492227 MS.gene059288:CDS
AAGTTGTGGAATGTGCAGAC+TGG 0.635011 2.2:-11492125 MS.gene059288:CDS
CTGATCAGACTGTTAAGTTG+TGG 0.637649 2.2:-11492139 MS.gene059288:CDS
TTATCGGCAAACCAAACGGT+GGG 0.639070 2.2:+11492254 None:intergenic
GGAAAGTTCCATAAACGGAT+CGG 0.642534 2.2:+11492019 None:intergenic
TACCTTAGCAGACTTATCAA+GGG 0.653883 2.2:+11490407 None:intergenic
AAACAGCACCGTTATGACCA+CGG 0.665988 2.2:+11492210 None:intergenic
ACTACTAAAGGAGTCAGACA+AGG 0.669645 2.2:-11490499 MS.gene059288:CDS
GCTCTATTGATTCTTCCCTG+AGG 0.677890 2.2:+11491815 None:intergenic
GTTATCGGCAAACCAAACGG+TGG 0.684154 2.2:+11492253 None:intergenic
ATTCTTCAAGAAGAAATTGG+GGG 0.687458 2.2:-11489609 MS.gene059288:CDS
GACAGAACGTCCTGTCAATG+CGG 0.693622 2.2:-11490242 MS.gene059288:CDS
GCGTTTAACATGAATCGCCG+AGG 0.701031 2.2:+11491998 None:intergenic
AGAATCAATAGAGCCATTTG+GGG 0.717983 2.2:-11491806 MS.gene059288:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAATAGTTAAAAAAAG+TGG + chr2.2:11489380-11489399 None:intergenic 10.0%
!!! TTTTCAATTTTTAGTTATTT+GGG - chr2.2:11491071-11491090 MS.gene059288:intron 10.0%
!!! ATTTTGATATTGAAATAATC+TGG + chr2.2:11492352-11492371 None:intergenic 15.0%
!!! GTTTTCAATTTTTAGTTATT+TGG - chr2.2:11491070-11491089 MS.gene059288:intron 15.0%
!!! TTTTGATATTGAAATAATCT+GGG + chr2.2:11492351-11492370 None:intergenic 15.0%
!! AATTACTAATTATCATGGAA+AGG - chr2.2:11492055-11492074 MS.gene059288:CDS 20.0%
!! AATTAGTAATTACACAATAC+AGG + chr2.2:11492046-11492065 None:intergenic 20.0%
!! ACTATTTAATTATACATGAG+TGG - chr2.2:11489389-11489408 MS.gene059288:intron 20.0%
!! ATCAAATTTGAAGGTTAAAT+AGG + chr2.2:11491965-11491984 None:intergenic 20.0%
!! CAATATAAAGAAGAAAAACT+GGG + chr2.2:11491717-11491736 None:intergenic 20.0%
!! GAAGAATCTAAACAAATAAA+TGG + chr2.2:11491318-11491337 None:intergenic 20.0%
!! GATTTGAAGATTAAAAACAA+AGG + chr2.2:11491420-11491439 None:intergenic 20.0%
!! TAAAACAAACAAACAAACAT+TGG + chr2.2:11489068-11489087 None:intergenic 20.0%
!! TATAAATTCTGCATAGTAAA+AGG + chr2.2:11491534-11491553 None:intergenic 20.0%
!! TATTTAACCTTCAAATTTGA+TGG - chr2.2:11491964-11491983 MS.gene059288:intron 20.0%
!! TCAAATTTGAAGGTTAAATA+GGG + chr2.2:11491964-11491983 None:intergenic 20.0%
!! TGTGTAATTACTAATTATCA+TGG - chr2.2:11492050-11492069 MS.gene059288:CDS 20.0%
!! TTGCAATATTAACTAGATTT+GGG - chr2.2:11490641-11490660 MS.gene059288:intron 20.0%
!! TTTGCAATATTAACTAGATT+TGG - chr2.2:11490640-11490659 MS.gene059288:intron 20.0%
!!! ATAGCATATTTTTTTACTGT+TGG - chr2.2:11491455-11491474 MS.gene059288:intron 20.0%
!!! TTATTTTGTAGTTTTTCAAG+TGG - chr2.2:11492289-11492308 MS.gene059288:CDS 20.0%
! AAACCTTGAAATATTTCCTA+AGG - chr2.2:11491836-11491855 MS.gene059288:CDS 25.0%
! AACGAAAACAACTGTAAATT+GGG - chr2.2:11489448-11489467 MS.gene059288:intron 25.0%
! AATTATACATGAGTGGAATT+AGG - chr2.2:11489396-11489415 MS.gene059288:intron 25.0%
! ACTTGTATGATTGTCTAATA+GGG - chr2.2:11491641-11491660 MS.gene059288:intron 25.0%
! AGATTCTTCAAGAAGAAATT+GGG - chr2.2:11491329-11491348 MS.gene059288:intron 25.0%
! AGCACATATATTAGAAAAGA+TGG - chr2.2:11489723-11489742 MS.gene059288:CDS 25.0%
! AGGAGAGATTGATTAATAAT+TGG - chr2.2:11491863-11491882 MS.gene059288:intron 25.0%
! ATAATGCCTCATAAATCAAA+TGG + chr2.2:11492198-11492217 None:intergenic 25.0%
! CAAACAATTATGCGAATTAA+TGG + chr2.2:11491592-11491611 None:intergenic 25.0%
! GAAATATTTCCTAAGGATAT+AGG - chr2.2:11491843-11491862 MS.gene059288:CDS 25.0%
! GAATCTTTGCTTGTAATTAA+GGG - chr2.2:11489101-11489120 MS.gene059288:intron 25.0%
! GCAATATAAAGAAGAAAAAC+TGG + chr2.2:11491718-11491737 None:intergenic 25.0%
! GGAAGACATTAGTTAATTAA+AGG + chr2.2:11490844-11490863 None:intergenic 25.0%
! GTAAAAGGTTAACATAATCA+TGG + chr2.2:11491519-11491538 None:intergenic 25.0%
! GTGAGAAATATAGCAAAAAA+AGG + chr2.2:11490169-11490188 None:intergenic 25.0%
! GTTGTTGTAAACTAATACTA+TGG - chr2.2:11492168-11492187 MS.gene059288:CDS 25.0%
! TAAACAGATTGTAGATTGTT+TGG - chr2.2:11491682-11491701 MS.gene059288:intron 25.0%
! TAAGTGCTCATAAAAATTTG+TGG - chr2.2:11489627-11489646 MS.gene059288:intron 25.0%
! TACAAAAAAAACATAGGGTA+AGG + chr2.2:11491135-11491154 None:intergenic 25.0%
! TACTTGTATGATTGTCTAAT+AGG - chr2.2:11491640-11491659 MS.gene059288:intron 25.0%
! TAGATTCTTCAAGAAGAAAT+TGG - chr2.2:11491328-11491347 MS.gene059288:intron 25.0%
! TATCCTTAGGAAATATTTCA+AGG + chr2.2:11491842-11491861 None:intergenic 25.0%
! TCATACAAGTAAATAGCATA+AGG + chr2.2:11491631-11491650 None:intergenic 25.0%
! TTAATAATTGGAATATAGCC+TGG - chr2.2:11491875-11491894 MS.gene059288:intron 25.0%
! TTATTGCAAAACTATTAGCA+AGG + chr2.2:11491033-11491052 None:intergenic 25.0%
! TTCATCAAATTCAATCTATG+TGG - chr2.2:11490052-11490071 MS.gene059288:intron 25.0%
! TTGTACTTGAGATATGTTAA+TGG + chr2.2:11488623-11488642 None:intergenic 25.0%
! TTTAGCAGTTAATCATAAAC+AGG - chr2.2:11491904-11491923 MS.gene059288:intron 25.0%
! TTTGAAAAAATGTGAATCGA+TGG + chr2.2:11491561-11491580 None:intergenic 25.0%
!! ATATGATTTTTCCGTAGTTT+TGG - chr2.2:11491779-11491798 MS.gene059288:CDS 25.0%
!! TATGATTTTTCCGTAGTTTT+GGG - chr2.2:11491780-11491799 MS.gene059288:CDS 25.0%
!! TGTTAGTTTAGACTTTGTTT+GGG + chr2.2:11490217-11490236 None:intergenic 25.0%
!! TTGTTAGTTTAGACTTTGTT+TGG + chr2.2:11490218-11490237 None:intergenic 25.0%
!!! TGTTGGTAATCTTCAATTTA+CGG - chr2.2:11491472-11491491 MS.gene059288:intron 25.0%
!!! TTACCCTATGTTTTTTTTGT+AGG - chr2.2:11491134-11491153 MS.gene059288:intron 25.0%
AAAAAGAACGAAAACTGGTT+AGG + chr2.2:11490622-11490641 None:intergenic 30.0%
AAAGGATCCATCAAATTTGA+AGG + chr2.2:11491974-11491993 None:intergenic 30.0%
AAGAAGGATTTAGAGATTAC+TGG - chr2.2:11490236-11490255 MS.gene059288:CDS 30.0%
AAGAATCAATAGAGCCATTT+GGG - chr2.2:11489133-11489152 MS.gene059288:intron 30.0%
AATACGAAATACCCCTAATT+TGG - chr2.2:11489933-11489952 MS.gene059288:intron 30.0%
AATATGAAATCCCCCTAATT+TGG - chr2.2:11489982-11490001 MS.gene059288:intron 30.0%
AATGGAGTAATTGTAGTAGA+TGG + chr2.2:11490391-11490410 None:intergenic 30.0%
ACCACCTACAAAAAAAACAT+AGG + chr2.2:11491141-11491160 None:intergenic 30.0%
ACGAAAACAACTGTAAATTG+GGG - chr2.2:11489449-11489468 MS.gene059288:intron 30.0%
ACTGCTTAGCATAAGTTTAA+AGG + chr2.2:11491992-11492011 None:intergenic 30.0%
AGAAGGATTTAGAGATTACT+GGG - chr2.2:11490237-11490256 MS.gene059288:CDS 30.0%
AGCATCTATTGTAGAAAAGA+TGG - chr2.2:11489330-11489349 MS.gene059288:intron 30.0%
ATACATACATGATCAAGAAG+AGG + chr2.2:11490735-11490754 None:intergenic 30.0%
ATACGAAATACCCCTAATTT+GGG - chr2.2:11489934-11489953 MS.gene059288:intron 30.0%
ATATGAAATCCCCCTAATTT+GGG - chr2.2:11489983-11490002 MS.gene059288:intron 30.0%
ATCTACCTTATCAAAGAACT+TGG + chr2.2:11491229-11491248 None:intergenic 30.0%
ATCTTCGATTACCAAAATGT+TGG + chr2.2:11492093-11492112 None:intergenic 30.0%
ATTCTTCAAGAAGAAATTGG+GGG - chr2.2:11491331-11491350 MS.gene059288:intron 30.0%
CAAAGTCTAAACTAACAAGA+AGG - chr2.2:11490220-11490239 MS.gene059288:CDS 30.0%
CAAGCTTCCTTCAAAAAAAT+AGG + chr2.2:11490886-11490905 None:intergenic 30.0%
CCACCTACAAAAAAAACATA+GGG + chr2.2:11491140-11491159 None:intergenic 30.0%
GAAATATTTCAAGGTTTCCA+TGG + chr2.2:11491833-11491852 None:intergenic 30.0%
GAACGAAAACAACTGTAAAT+TGG - chr2.2:11489447-11489466 MS.gene059288:intron 30.0%
GACATGTAGATTCTGTATTA+AGG - chr2.2:11489784-11489803 MS.gene059288:CDS 30.0%
GATTCTTCAAGAAGAAATTG+GGG - chr2.2:11491330-11491349 MS.gene059288:intron 30.0%
GGAATCTTTGCTTGTAATTA+AGG - chr2.2:11489100-11489119 MS.gene059288:intron 30.0%
TTAACTGCTAAATTAGAACC+AGG + chr2.2:11491896-11491915 None:intergenic 30.0%
TTGCAAAAAAGAACGAAAAC+TGG + chr2.2:11490627-11490646 None:intergenic 30.0%
TTTGAAAAGAAACAACAGCA+AGG + chr2.2:11491759-11491778 None:intergenic 30.0%
! ATGCAAACTTCTGAAAGAAA+GGG + chr2.2:11490936-11490955 None:intergenic 30.0%
! CAAAGCCTTATAGTTATTCT+AGG + chr2.2:11489865-11489884 None:intergenic 30.0%
! GTGATGTTATTGTCTTTTTG+TGG + chr2.2:11490474-11490493 None:intergenic 30.0%
! GTGTGAATATTCCAACATTT+TGG - chr2.2:11492079-11492098 MS.gene059288:CDS 30.0%
! TATGCAAACTTCTGAAAGAA+AGG + chr2.2:11490937-11490956 None:intergenic 30.0%
! TCGACGAATTTTTACGTTTA+GGG - chr2.2:11489294-11489313 MS.gene059288:intron 30.0%
! TTCGACGAATTTTTACGTTT+AGG - chr2.2:11489293-11489312 MS.gene059288:intron 30.0%
!! ATGAGACCAATTTTGATGAA+AGG - chr2.2:11488587-11488606 MS.gene059288:CDS 30.0%
!! ATGATTTTTCCGTAGTTTTG+GGG - chr2.2:11491781-11491800 MS.gene059288:CDS 30.0%
!!! ATGGTGTCCTATTTTTTTGA+AGG - chr2.2:11490876-11490895 MS.gene059288:intron 30.0%
!!! TTAATTTTGATTCTCCTGCT+AGG - chr2.2:11488855-11488874 MS.gene059288:intron 30.0%
!!! TTTGTTTTATTCAGAGACTG+CGG - chr2.2:11489079-11489098 MS.gene059288:intron 30.0%
!!! TTTTGTAGTTTTTCAAGTGG+AGG - chr2.2:11492292-11492311 MS.gene059288:CDS 30.0%
!!! TTTTTTTTGTAGGTGGTACT+TGG - chr2.2:11491144-11491163 MS.gene059288:intron 30.0%
AAAAGAAACAACAGCAAGGA+AGG + chr2.2:11491755-11491774 None:intergenic 35.0%
AAACTAGACTTAGGTGGTTT+GGG - chr2.2:11489749-11489768 MS.gene059288:CDS 35.0%
AAGATGCTGTCATTCGTATT+TGG - chr2.2:11489189-11489208 MS.gene059288:intron 35.0%
AATAAGAAAGAAAGGGGTTG+AGG + chr2.2:11490963-11490982 None:intergenic 35.0%
AATCCAAAGTAACCTTGTAC+TGG + chr2.2:11489553-11489572 None:intergenic 35.0%
AGAATCAATAGAGCCATTTG+GGG - chr2.2:11489134-11489153 MS.gene059288:intron 35.0%
AGAGAAAACCATACAATGAC+TGG + chr2.2:11491109-11491128 None:intergenic 35.0%
AGATGCTGTCATTCGTATTT+GGG - chr2.2:11489190-11489209 MS.gene059288:intron 35.0%
AGATGGTAGAAACTAGACTT+AGG - chr2.2:11489740-11489759 MS.gene059288:CDS 35.0%
AGGGAGAATAAGAAAGAAAG+GGG + chr2.2:11490969-11490988 None:intergenic 35.0%
ATACCTTAGCAGACTTATCA+AGG + chr2.2:11490537-11490556 None:intergenic 35.0%
ATTAAGGAGAGTAGATCTGA+TGG - chr2.2:11489800-11489819 MS.gene059288:intron 35.0%
CAGAAAAAGCTTGATGCTTA+CGG + chr2.2:11488988-11489007 None:intergenic 35.0%
CAGGGAGAATAAGAAAGAAA+GGG + chr2.2:11490970-11490989 None:intergenic 35.0%
CTTATCCAACTAAGTGGAAT+CGG + chr2.2:11490318-11490337 None:intergenic 35.0%
GAAAAAATGTGAATCGATGG+TGG + chr2.2:11491558-11491577 None:intergenic 35.0%
GAAGAATCAATAGAGCCATT+TGG - chr2.2:11489132-11489151 MS.gene059288:intron 35.0%
GAGGACCTAGAATAACTATA+AGG - chr2.2:11489857-11489876 MS.gene059288:intron 35.0%
GGTGAACTGCAATAATTTCA+TGG + chr2.2:11490601-11490620 None:intergenic 35.0%
GTCTTCCTCTTGCATAATAA+TGG - chr2.2:11490857-11490876 MS.gene059288:intron 35.0%
GTGCTCATAAAAATTTGTGG+TGG - chr2.2:11489630-11489649 MS.gene059288:intron 35.0%
TAAAGAAGAAAAACTGGGCA+TGG + chr2.2:11491712-11491731 None:intergenic 35.0%
TACCTTAGCAGACTTATCAA+GGG + chr2.2:11490536-11490555 None:intergenic 35.0%
TACGGATGAACTGGAAAAAT+GGG - chr2.2:11491490-11491509 MS.gene059288:intron 35.0%
TACTGGTGGTAAGAAAATGT+GGG + chr2.2:11489536-11489555 None:intergenic 35.0%
TATCTCAAGTACAACCTTGA+CGG - chr2.2:11488629-11488648 MS.gene059288:CDS 35.0%
TATGAAATCCCCCTAATTTG+GGG - chr2.2:11489984-11490003 MS.gene059288:intron 35.0%
TCAATCTCTCCTATATCCTT+AGG + chr2.2:11491855-11491874 None:intergenic 35.0%
TCATGGCCTTTCATCAAAAT+TGG + chr2.2:11488596-11488615 None:intergenic 35.0%
TCGCAACAAAGTAAAATCCA+TGG - chr2.2:11491813-11491832 MS.gene059288:CDS 35.0%
TCTTCAATTTACGGATGAAC+TGG - chr2.2:11491481-11491500 MS.gene059288:intron 35.0%
TGAAGCCAAGTTCTTTGATA+AGG - chr2.2:11491221-11491240 MS.gene059288:intron 35.0%
TTACGGATGAACTGGAAAAA+TGG - chr2.2:11491489-11491508 MS.gene059288:intron 35.0%
TTACTTTGTTGCGAACAAGA+GGG + chr2.2:11491807-11491826 None:intergenic 35.0%
TTTACTTGTCTGATACCATG+TGG - chr2.2:11491935-11491954 MS.gene059288:intron 35.0%
TTTACTTTGTTGCGAACAAG+AGG + chr2.2:11491808-11491827 None:intergenic 35.0%
! ATGGAGCTAAACAGTTTTCT+CGG + chr2.2:11489503-11489522 None:intergenic 35.0%
! ATTTGGAGTTTCCCCAAATT+AGG + chr2.2:11489998-11490017 None:intergenic 35.0%
! ATTTTCTTACCACCAGTACA+AGG - chr2.2:11489538-11489557 MS.gene059288:intron 35.0%
! GGTTCTCCATTTGATTTATG+AGG - chr2.2:11492189-11492208 MS.gene059288:CDS 35.0%
! TGCAAACTTCTGAAAGAAAG+GGG + chr2.2:11490935-11490954 None:intergenic 35.0%
! TTAGACTTTGTTTGGGAGTT+TGG + chr2.2:11490210-11490229 None:intergenic 35.0%
! TTTGGAGTTTCCCCAAATTA+GGG + chr2.2:11489997-11490016 None:intergenic 35.0%
!! ATACCATTTCAAGTTCTCTC+AGG - chr2.2:11491265-11491284 MS.gene059288:intron 35.0%
!!! ACTGATGATGGTTTTGTTGA+GGG + chr2.2:11489162-11489181 None:intergenic 35.0%
!!! CCCTATGTTTTTTTTGTAGG+TGG - chr2.2:11491137-11491156 MS.gene059288:intron 35.0%
AAACCCTCCTCAAGACAATT+TGG + chr2.2:11490015-11490034 None:intergenic 40.0%
AAAGGAGTCAGACAAGGAAT+TGG - chr2.2:11490447-11490466 MS.gene059288:CDS 40.0%
AAATGTGGGCAATAGGAAGA+TGG + chr2.2:11489522-11489541 None:intergenic 40.0%
AACAAAACCATCATCAGTGC+CGG - chr2.2:11489164-11489183 MS.gene059288:intron 40.0%
AACTCCAAATTGTCTTGAGG+AGG - chr2.2:11490008-11490027 MS.gene059288:intron 40.0%
AACTGTAAATTGGGGATGTC+TGG - chr2.2:11489457-11489476 MS.gene059288:intron 40.0%
AAGCCAGCAAGAGAATAGAA+TGG + chr2.2:11490409-11490428 None:intergenic 40.0%
AAGGAGTCAGACAAGGAATT+GGG - chr2.2:11490448-11490467 MS.gene059288:CDS 40.0%
AATACCCCTAATTTGGGCAT+TGG - chr2.2:11489940-11489959 MS.gene059288:intron 40.0%
ACACCTGAGAGAACTTGAAA+TGG + chr2.2:11491271-11491290 None:intergenic 40.0%
ACTACTAAAGGAGTCAGACA+AGG - chr2.2:11490441-11490460 MS.gene059288:CDS 40.0%
ACTCCAAATTGTCTTGAGGA+GGG - chr2.2:11490009-11490028 MS.gene059288:intron 40.0%
ACTCCATTCTATTCTCTTGC+TGG - chr2.2:11490403-11490422 MS.gene059288:intron 40.0%
AGAGATTAGAGAGAGAGTTG+GGG - chr2.2:11489699-11489718 MS.gene059288:intron 40.0%
ATACCCCTAATTTGGGCATT+GGG - chr2.2:11489941-11489960 MS.gene059288:intron 40.0%
ATCATGAACTAGTAAGCAGC+AGG + chr2.2:11490989-11491008 None:intergenic 40.0%
ATGTGAACCATCAGCAGATT+TGG + chr2.2:11490500-11490519 None:intergenic 40.0%
CAGAATTGCAATTCGTCTAC+TGG - chr2.2:11489582-11489601 MS.gene059288:CDS 40.0%
CGATTCCACTTAGTTGGATA+AGG - chr2.2:11490316-11490335 MS.gene059288:intron 40.0%
CTTGTAATTAAGGGACCTCA+GGG - chr2.2:11489110-11489129 MS.gene059288:intron 40.0%
GAAACTAGACTTAGGTGGTT+TGG - chr2.2:11489748-11489767 MS.gene059288:CDS 40.0%
GAGAGATTAGAGAGAGAGTT+GGG - chr2.2:11489698-11489717 MS.gene059288:intron 40.0%
GAGGGTAGTTAAATCACTAG+AGG - chr2.2:11489822-11489841 MS.gene059288:intron 40.0%
GATATGTTAATGGCCTCTCA+TGG + chr2.2:11488613-11488632 None:intergenic 40.0%
GCAGACTGGAAAACTACTAA+AGG - chr2.2:11490429-11490448 MS.gene059288:CDS 40.0%
GCAGGGAGAATAAGAAAGAA+AGG + chr2.2:11490971-11490990 None:intergenic 40.0%
GGAAACTCCAAATTGTCTTG+AGG - chr2.2:11490005-11490024 MS.gene059288:intron 40.0%
GGAAAGTTCCATAAACGGAT+CGG + chr2.2:11488924-11488943 None:intergenic 40.0%
GGACACCATTATTATGCAAG+AGG + chr2.2:11490865-11490884 None:intergenic 40.0%
GGATTTAGAGATTACTGGGT+TGG - chr2.2:11490241-11490260 MS.gene059288:CDS 40.0%
GGTAAGAAAATGTGGGCAAT+AGG + chr2.2:11489529-11489548 None:intergenic 40.0%
TATCACTACCGATCCGTTTA+TGG - chr2.2:11488913-11488932 MS.gene059288:intron 40.0%
TCATGAACTAGTAAGCAGCA+GGG + chr2.2:11490988-11491007 None:intergenic 40.0%
TCCGTTTATGGAACTTTCCT+CGG - chr2.2:11488925-11488944 MS.gene059288:intron 40.0%
TGAGAGATTAGAGAGAGAGT+TGG - chr2.2:11489697-11489716 MS.gene059288:intron 40.0%
TGCAATTCGTCTACTGGATT+TGG - chr2.2:11489588-11489607 MS.gene059288:CDS 40.0%
TGGTAGAAACTAGACTTAGG+TGG - chr2.2:11489743-11489762 MS.gene059288:CDS 40.0%
TTACGTTTAGGGATAGAGCT+GGG - chr2.2:11489305-11489324 MS.gene059288:intron 40.0%
TTCGTCGAATCTCTATCACA+TGG + chr2.2:11489282-11489301 None:intergenic 40.0%
TTGAAGGCCAGTGCATTAAT+CGG + chr2.2:11491376-11491395 None:intergenic 40.0%
TTGGAGTTTCCCCAAATTAG+GGG + chr2.2:11489996-11490015 None:intergenic 40.0%
TTTACGTTTAGGGATAGAGC+TGG - chr2.2:11489304-11489323 MS.gene059288:intron 40.0%
! AACTTCTGAAAGAAAGGGGT+TGG + chr2.2:11490931-11490950 None:intergenic 40.0%
! AAGAAATTGGGGGTGTGAAA+GGG - chr2.2:11491341-11491360 MS.gene059288:intron 40.0%
! ACTTTGTTTGGGAGTTTGGA+GGG + chr2.2:11490206-11490225 None:intergenic 40.0%
! AGGATGTACCTTTTTCCATC+AGG + chr2.2:11491400-11491419 None:intergenic 40.0%
! CATTCGTATTTGGGATTCTG+AGG - chr2.2:11489199-11489218 MS.gene059288:intron 40.0%
! CTGATCAGACTGTTAAGTTG+TGG - chr2.2:11488801-11488820 MS.gene059288:intron 40.0%
! GGATGTACCTTTTTCCATCA+GGG + chr2.2:11491399-11491418 None:intergenic 40.0%
! GTACTGGTGGTAAGAAAATG+TGG + chr2.2:11489537-11489556 None:intergenic 40.0%
! GTGTTACTCCAGTCATTGTA+TGG - chr2.2:11491098-11491117 MS.gene059288:intron 40.0%
! TACTGGGTTGGATAGGAATA+TGG - chr2.2:11490253-11490272 MS.gene059288:CDS 40.0%
! TAGAGATTACTGGGTTGGAT+AGG - chr2.2:11490246-11490265 MS.gene059288:CDS 40.0%
! TTTTGATGAAAGGCCATGAG+AGG - chr2.2:11488597-11488616 MS.gene059288:CDS 40.0%
! TTTTGGACCGATTAATGCAC+TGG - chr2.2:11491366-11491385 MS.gene059288:intron 40.0%
! TTTTTGTAGGTGGTACTTGG+AGG - chr2.2:11491147-11491166 MS.gene059288:intron 40.0%
!! AGGTCTGTTGATTTCTCTGT+TGG - chr2.2:11488875-11488894 MS.gene059288:intron 40.0%
!! CTCTTGTTGTTGCTAACACT+CGG - chr2.2:11490347-11490366 MS.gene059288:intron 40.0%
!!! CACTGATGATGGTTTTGTTG+AGG + chr2.2:11489163-11489182 None:intergenic 40.0%
!!! CTGATGATGGTTTTGTTGAG+GGG + chr2.2:11489161-11489180 None:intergenic 40.0%
!!! TTTTCAAGTGGAGGAGAAGA+TGG - chr2.2:11492301-11492320 MS.gene059288:CDS 40.0%
AAACAGCACCGTTATGACCA+CGG + chr2.2:11488733-11488752 None:intergenic 45.0%
AACCTCCCAATGCCCAAATT+AGG + chr2.2:11489949-11489968 None:intergenic 45.0%
AAGATCACAATCCCACCGTT+TGG - chr2.2:11488675-11488694 MS.gene059288:intron 45.0%
AAGGAGAGTAGATCTGATGG+AGG - chr2.2:11489803-11489822 MS.gene059288:intron 45.0%
AAGTTGTGGAATGTGCAGAC+TGG - chr2.2:11488815-11488834 MS.gene059288:intron 45.0%
AATCACTAGAGGTAGATGCC+AGG - chr2.2:11489833-11489852 MS.gene059288:intron 45.0%
ACAACAACTGATCATCGTGC+TGG - chr2.2:11491192-11491211 MS.gene059288:intron 45.0%
ACCGTTATCGGCAAACCAAA+CGG + chr2.2:11488693-11488712 None:intergenic 45.0%
ACCTCCCAATGCCCAAATTA+GGG + chr2.2:11489948-11489967 None:intergenic 45.0%
ACGAATGACAGCATCTTCTC+CGG + chr2.2:11489186-11489205 None:intergenic 45.0%
ACTAAGTGGAATCGGTTGCA+TGG + chr2.2:11490310-11490329 None:intergenic 45.0%
AGAAAAGAAGATCGCCGTCA+AGG + chr2.2:11488646-11488665 None:intergenic 45.0%
AGGAGAGTAGATCTGATGGA+GGG - chr2.2:11489804-11489823 MS.gene059288:intron 45.0%
AGTTATTCTAGGTCCTCACC+TGG + chr2.2:11489854-11489873 None:intergenic 45.0%
ATTGGGGATGTCTGGTATAC+TGG - chr2.2:11489465-11489484 MS.gene059288:intron 45.0%
CATTTGAGCGAGTAGTGCTT+TGG - chr2.2:11489891-11489910 MS.gene059288:intron 45.0%
CCAAAGTAACCTTGTACTGG+TGG + chr2.2:11489550-11489569 None:intergenic 45.0%
CCACCAGTACAAGGTTACTT+TGG - chr2.2:11489547-11489566 MS.gene059288:intron 45.0%
CCACTTAGTTGGATAAGGCT+TGG - chr2.2:11490321-11490340 MS.gene059288:intron 45.0%
CCTTCAACCCTGATGGAAAA+AGG - chr2.2:11491389-11491408 MS.gene059288:intron 45.0%
CTCCCTTGATAAGTCTGCTA+AGG - chr2.2:11490531-11490550 MS.gene059288:intron 45.0%
GAAGAAAAACTGGGCATGGT+CGG + chr2.2:11491708-11491727 None:intergenic 45.0%
GAGAAATCAACAGACCTAGC+AGG + chr2.2:11488872-11488891 None:intergenic 45.0%
GATGGTTCACATTTCTGCAC+TGG - chr2.2:11490508-11490527 MS.gene059288:CDS 45.0%
GCCGAGGAAAGTTCCATAAA+CGG + chr2.2:11488929-11488948 None:intergenic 45.0%
GCTTGTAATTAAGGGACCTC+AGG - chr2.2:11489109-11489128 MS.gene059288:intron 45.0%
GGTTAAATAGGGACACCACA+TGG + chr2.2:11491953-11491972 None:intergenic 45.0%
TAATAAGCCGACCGGAATCA+CGG + chr2.2:11488772-11488791 None:intergenic 45.0%
TACGTTTAGGGATAGAGCTG+GGG - chr2.2:11489306-11489325 MS.gene059288:intron 45.0%
TGGAGTTTCCCCAAATTAGG+GGG + chr2.2:11489995-11490014 None:intergenic 45.0%
TTATCGGCAAACCAAACGGT+GGG + chr2.2:11488689-11488708 None:intergenic 45.0%
! CCAAGCCTTATCCAACTAAG+TGG + chr2.2:11490324-11490343 None:intergenic 45.0%
! CCTTTTTCCATCAGGGTTGA+AGG + chr2.2:11491392-11491411 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr2.2:11490205-11490224 None:intergenic 45.0%
! GAAGAAATTGGGGGTGTGAA+AGG - chr2.2:11491340-11491359 MS.gene059288:intron 45.0%
! GACATTGTAACCGCATTGAC+AGG + chr2.2:11490711-11490730 None:intergenic 45.0%
! GACTTTGTTTGGGAGTTTGG+AGG + chr2.2:11490207-11490226 None:intergenic 45.0%
! TGCAACCGATTCCACTTAGT+TGG - chr2.2:11490310-11490329 MS.gene059288:intron 45.0%
!! ACCGTTTGGTTTGCCGATAA+CGG - chr2.2:11488689-11488708 MS.gene059288:intron 45.0%
!! GCTCTATTGATTCTTCCCTG+AGG + chr2.2:11489128-11489147 None:intergenic 45.0%
!! GTATTTGGGATTCTGAGGTG+AGG - chr2.2:11489204-11489223 MS.gene059288:intron 45.0%
!! TGTCTTGAGGAGGGTTTTGA+AGG - chr2.2:11490018-11490037 MS.gene059288:intron 45.0%
!!! GTCTTGAGGAGGGTTTTGAA+GGG - chr2.2:11490019-11490038 MS.gene059288:intron 45.0%
AATAAGCCGACCGGAATCAC+GGG + chr2.2:11488771-11488790 None:intergenic 50.0%
ACAAGAGGGCCCCAAAACTA+CGG + chr2.2:11491793-11491812 None:intergenic 50.0%
ACTGCCAGTAATAAGCCGAC+CGG + chr2.2:11488780-11488799 None:intergenic 50.0%
AGCTTGATGCTTACGGTCAG+CGG + chr2.2:11488981-11489000 None:intergenic 50.0%
ATGTTTCCCGTGATTCCGGT+CGG - chr2.2:11488762-11488781 MS.gene059288:intron 50.0%
CCTCCCAATGCCCAAATTAG+GGG + chr2.2:11489947-11489966 None:intergenic 50.0%
GACAGAACGTCCTGTCAATG+CGG - chr2.2:11490698-11490717 MS.gene059288:intron 50.0%
GCGTTTAACATGAATCGCCG+AGG + chr2.2:11488945-11488964 None:intergenic 50.0%
GGCACTTACCGTGGTCATAA+CGG - chr2.2:11488722-11488741 MS.gene059288:intron 50.0%
GTTATCGGCAAACCAAACGG+TGG + chr2.2:11488690-11488709 None:intergenic 50.0%
TCACTCGCCAAATCTGCTGA+TGG - chr2.2:11490490-11490509 MS.gene059288:CDS 50.0%
TGAGCGAGTAGTGCTTTGGT+GGG - chr2.2:11489895-11489914 MS.gene059288:intron 50.0%
TGCGATGTTTCCCGTGATTC+CGG - chr2.2:11488758-11488777 MS.gene059288:intron 50.0%
TTGAGCGAGTAGTGCTTTGG+TGG - chr2.2:11489894-11489913 MS.gene059288:intron 50.0%
TTGTAGGTGGTACTTGGAGG+TGG - chr2.2:11491150-11491169 MS.gene059288:intron 50.0%
TTTGTTGAGGGGTCCCCAAA+TGG + chr2.2:11489150-11489169 None:intergenic 50.0%
! GATTCCGGTCGGCTTATTAC+TGG - chr2.2:11488773-11488792 MS.gene059288:intron 50.0%
!! ATCTTCTCCGGCACTGATGA+TGG + chr2.2:11489174-11489193 None:intergenic 50.0%
!! GTGGTCATAACGGTGCTGTT+TGG - chr2.2:11488732-11488751 MS.gene059288:intron 50.0%
CTAGAGGTAGATGCCAGGTG+AGG - chr2.2:11489838-11489857 MS.gene059288:intron 55.0%
CTTACGGTCAGCGGGATCTT+TGG + chr2.2:11488972-11488991 None:intergenic 55.0%
GCCGAGACGTTCACCGTTAT+CGG + chr2.2:11488705-11488724 None:intergenic 55.0%
GCTTGATGCTTACGGTCAGC+GGG + chr2.2:11488980-11488999 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + chr2.2:11490201-11490220 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + chr2.2:11490202-11490221 None:intergenic 55.0%
! GAGTTTGGAGGGGAGGGTTT+TGG + chr2.2:11490195-11490214 None:intergenic 55.0%
! GCCGATAACGGTGAACGTCT+CGG - chr2.2:11488701-11488720 MS.gene059288:intron 55.0%
!! CCCCTAATTTGGGCATTGGG+AGG - chr2.2:11489944-11489963 MS.gene059288:intron 55.0%
!! TCTCTTGCTGGCTTGCAGAC+TGG - chr2.2:11490415-11490434 MS.gene059288:CDS 55.0%
!! TTTGGAGGGGAGGGTTTTGG+AGG + chr2.2:11490192-11490211 None:intergenic 55.0%
!!! GGGGGTGTGAAAGGGCATTT+TGG - chr2.2:11491349-11491368 MS.gene059288:intron 55.0%
!!! TTGGAGGGGAGGGTTTTGGA+GGG + chr2.2:11490191-11490210 None:intergenic 55.0%
GAACGTCTCGGCACTTACCG+TGG - chr2.2:11488713-11488732 MS.gene059288:intron 60.0%
GGTGGTACTTGGAGGTGGTC+AGG - chr2.2:11491155-11491174 MS.gene059288:intron 60.0%
!! GCACTGGCCTTCAACCCTGA+TGG - chr2.2:11491382-11491401 MS.gene059288:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 11488587 11492375 11488587 ID=MS.gene059288
chr2.2 mRNA 11488587 11492375 11488587 ID=MS.gene059288.t1;Parent=MS.gene059288
chr2.2 exon 11491976 11492375 11491976 ID=MS.gene059288.t1.exon1;Parent=MS.gene059288.t1
chr2.2 CDS 11491976 11492375 11491976 ID=cds.MS.gene059288.t1;Parent=MS.gene059288.t1
chr2.2 exon 11491742 11491869 11491742 ID=MS.gene059288.t1.exon2;Parent=MS.gene059288.t1
chr2.2 CDS 11491742 11491869 11491742 ID=cds.MS.gene059288.t1;Parent=MS.gene059288.t1
chr2.2 exon 11490410 11490529 11490410 ID=MS.gene059288.t1.exon3;Parent=MS.gene059288.t1
chr2.2 CDS 11490410 11490529 11490410 ID=cds.MS.gene059288.t1;Parent=MS.gene059288.t1
chr2.2 exon 11490216 11490305 11490216 ID=MS.gene059288.t1.exon4;Parent=MS.gene059288.t1
chr2.2 CDS 11490216 11490305 11490216 ID=cds.MS.gene059288.t1;Parent=MS.gene059288.t1
chr2.2 exon 11489720 11489806 11489720 ID=MS.gene059288.t1.exon5;Parent=MS.gene059288.t1
chr2.2 CDS 11489720 11489806 11489720 ID=cds.MS.gene059288.t1;Parent=MS.gene059288.t1
chr2.2 exon 11489552 11489631 11489552 ID=MS.gene059288.t1.exon6;Parent=MS.gene059288.t1
chr2.2 CDS 11489552 11489631 11489552 ID=cds.MS.gene059288.t1;Parent=MS.gene059288.t1
chr2.2 exon 11488587 11488662 11488587 ID=MS.gene059288.t1.exon7;Parent=MS.gene059288.t1
chr2.2 CDS 11488587 11488662 11488587 ID=cds.MS.gene059288.t1;Parent=MS.gene059288.t1
Gene Sequence

>MS.gene059288

ATGAGACCAATTTTGATGAAAGGCCATGAGAGGCCATTAACATATCTCAAGTACAACCTTGACGGCGATCTTCTTTTCTCTTGTGCTAAAGATCACAATCCCACCGTTTGGTTTGCCGATAACGGTGAACGTCTCGGCACTTACCGTGGTCATAACGGTGCTGTTTGGTGTTGCGATGTTTCCCGTGATTCCGGTCGGCTTATTACTGGCAGTGCTGATCAGACTGTTAAGTTGTGGAATGTGCAGACTGGTCAGCAGTTGTTTACTTTTAATTTTGATTCTCCTGCTAGGTCTGTTGATTTCTCTGTTGGTGATAAGCTTGCTGTTATCACTACCGATCCGTTTATGGAACTTTCCTCGGCGATTCATGTTAAACGCATTGCCAAAGATCCCGCTGACCGTAAGCATCAAGCTTTTTCTGTGTCTGTGTTTGTGCTTTATTGATTTGATGCAAATTTGATGATTGTCAATGCTAATGCCAATGTTTGTTTGTTTGTTTTATTCAGAGACTGCGGAATCTTTGCTTGTAATTAAGGGACCTCAGGGAAGAATCAATAGAGCCATTTGGGGACCCCTCAACAAAACCATCATCAGTGCCGGAGAAGATGCTGTCATTCGTATTTGGGATTCTGAGGTGAGGATTTGCTTCTTATTATCTATTTTTATTTATTTTGCAAACACTCACACACTGTCCATGTGATAGAGATTCGACGAATTTTTACGTTTAGGGATAGAGCTGGGGTAGCATCTATTGTAGAAAAGATGGTAGAAATTCAGCTCATATACTTGACCACTTTTTTTAACTATTTAATTATACATGAGTGGAATTAGGTTTGTTCTTTTTCATTCTCAGATCATGTGAACGAAAACAACTGTAAATTGGGGATGTCTGGTATACTGGCTAGTAGTTTAGCCGAGAAAACTGTTTAGCTCCATCTTCCTATTGCCCACATTTTCTTACCACCAGTACAAGGTTACTTTGGATTAATTAATTTCAGAATTGCAATTCGTCTACTGGATTTGGATCATTATCTTGTTTGTAAGTGCTCATAAAAATTTGTGGTGGTCAATACTGAGTGATATGATTAGAATTGACAACATTAGAGAGAGTGAGAGATTAGAGAGAGAGTTGGGGTAGCACATATATTAGAAAAGATGGTAGAAACTAGACTTAGGTGGTTTGGGCATGTAAGAGAAGACATGTAGATTCTGTATTAAGGAGAGTAGATCTGATGGAGGGTAGTTAAATCACTAGAGGTAGATGCCAGGTGAGGACCTAGAATAACTATAAGGCTTTGTTTGTGCATTTGAGCGAGTAGTGCTTTGGTGGGTTCAGTTATCTTCATAATACGAAATACCCCTAATTTGGGCATTGGGAGGTTCAGTTATCTTCATAATATGAAATCCCCCTAATTTGGGGAAACTCCAAATTGTCTTGAGGAGGGTTTTGAAGGGTTTGTTTGAATTCATCAAATTCAATCTATGTGGTTATACAATTCTTAAAATTAGAAATATATTAATAATAAGAATTCGTGTATCATTCTCTAAAAAATACTTCGAAAAAATATGAAAAGTTTCTCCTTTTTTTGCTATATTTCTCACCCTCCAAAACCCTCCCCTCCAAACTCCCAAACAAAGTCTAAACTAACAAGAAGGATTTAGAGATTACTGGGTTGGATAGGAATATGGTATATGATAGAACATTATGAAGTAATTTGATCCATGCAACCGATTCCACTTAGTTGGATAAGGCTTGGTTGCTCTTGTTGTTGCTAACACTCGGTAGTCACTAATACTATCTCCATCTACTACAATTACTCCATTCTATTCTCTTGCTGGCTTGCAGACTGGAAAACTACTAAAGGAGTCAGACAAGGAATTGGGCCACAAAAAGACAATAACATCACTCGCCAAATCTGCTGATGGTTCACATTTCTGCACTGGCTCCCTTGATAAGTCTGCTAAGGTATCATCATCATTTTAATTACTTTTTTTAATCTTCTGTAACATACCATGAAATTATTGCAGTTCACCTAACCAGTTTTCGTTCTTTTTTGCAATATTAACTAGATTTGGGATAGCAGAACGTTGTCTCTTGTCAAGACATATGTGACAGAACGTCCTGTCAATGCGGTTACAATGTCTCCTCTTCTTGATCATGTATGTATTTGTGTATTGTTAATCATTTGATTTAAGTCATGTCACAATATTCATATTAATAATTTTGCTAATCTATTTAAGTAATAATGTTTCACCTTTAATTAACTAATGTCTTCCTCTTGCATAATAATGGTGTCCTATTTTTTTGAAGGAAGCTTGTTAAAAGTTTGCATAATATACACCAACCCCTTTCTTTCAGAAGTTTGCATAATGCCTCAACCCCTTTCTTTCTTATTCTCCCTGCTGCTTACTAGTTCATGATATAAATGCATTTTAAATAGTTCCTTGCTAATAGTTTTGCAATAAATTCTGATATCACTTCAGTTTTCAATTTTTAGTTATTTGGGACGTGTGTTACTCCAGTCATTGTATGGTTTTCTCTATTCCTTACCCTATGTTTTTTTTGTAGGTGGTACTTGGAGGTGGTCAGGATGCTTCAGCTGTCACAACAACTGATCATCGTGCTGGAAAATTTGAAGCCAAGTTCTTTGATAAGGTAGATTTGAGTTTTCTTTCTAATACCATTTCAAGTTCTCTCAGGTGTCTATTTTTCATATTTGTTATTTTTCCATTTATTTGTTTAGATTCTTCAAGAAGAAATTGGGGGTGTGAAAGGGCATTTTGGACCGATTAATGCACTGGCCTTCAACCCTGATGGAAAAAGGTACATCCTTTGTTTTTAATCTTCAAATCTTTCTGTGTTGCAACATAGCATATTTTTTTACTGTTGGTAATCTTCAATTTACGGATGAACTGGAAAAATGGGCTACCATGATTATGTTAACCTTTTACTATGCAGAATTTATATCCACCATCGATTCACATTTTTTCAAAAAACAAAACCATTAATTCGCATAATTGTTTGAAATTTCAATATTTTTCCTTATGCTATTTACTTGTATGATTGTCTAATAGGGCATATTGCATAATAAATATAAACAGATTGTAGATTGTTTGGCCGACCATGCCCAGTTTTTCTTCTTTATATTGCATTGATACGAAAATCCTTCCTTGCTGTTGTTTCTTTTCAAAATATGATTTTTCCGTAGTTTTGGGGCCCTCTTGTTCGCAACAAAGTAAAATCCATGGAAACCTTGAAATATTTCCTAAGGATATAGGAGAGATTGATTAATAATTGGAATATAGCCTGGTTCTAATTTAGCAGTTAATCATAAACAGGCGAAATAGTTTACTTGTCTGATACCATGTGGTGTCCCTATTTAACCTTCAAATTTGATGGATCCTTTAAACTTATGCTAAGCAGTGCAACTTACTATTTATACTAGACATTAGTTTCCTGTATTGTGTAATTACTAATTATCATGGAAAGGAGTGTGAATATTCCAACATTTTGGTAATCGAAGATGATCAATATAGTAGTAATCGACACATTTGTTGTGATTTTTTGCTTCAAATTATACGTTGTTGTAAACTAATACTATGGTTCTCCATTTGATTTATGAGGCATTATATTATAGATTTCTGAGTATAAGTTAGTTGTTGAACTGTTTCTTTTATTGTACAGAGTCTCACACATTCTTATTATTTTGTAGTTTTTCAAGTGGAGGAGAAGATGGATATGTACGTTTGCATCACTTTGACCCAGATTATTTCAATATCAAAATTTAG
Protein sequence

>MS.gene059288.t1

MRPILMKGHERPLTYLKYNLDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDVSRDSGRLITGSADQTVKLWNVQTGQQLFTFNFDSPARSVDFSVGDKLAVITTDPFMELSSAIHVKRIAKDPADQTAESLLVIKGPQGRINRAIWGPLNKTIISAGEDAVIRIWDSETGKLLKESDKELGHKKTITSLAKSADGSHFCTGSLDKSAKIWDSRTLSLVKTYVTERPVNAVTMSPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFNIKI