Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56095.t1 | XP_013467035.1 | 97.8 | 324 | 7 | 0 | 1 | 324 | 1 | 324 | 1.70E-178 | 635.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56095.t1 | Q5XEP2 | 39.3 | 117 | 71 | 0 | 15 | 131 | 386 | 502 | 5.7e-18 | 93.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56095.t1 | A0A072VSG1 | 97.8 | 324 | 7 | 0 | 1 | 324 | 1 | 324 | 1.2e-178 | 635.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053338 | MS.gene56095 | 0.899087 | 2.80E-77 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56095 | MS.gene35520 | PPI |
| MS.gene56095 | MS.gene049084 | PPI |
| MS.gene05880 | MS.gene56095 | PPI |
| MS.gene015787 | MS.gene56095 | PPI |
| MS.gene56095 | MS.gene034375 | PPI |
| MS.gene56095 | MS.gene05958 | PPI |
| MS.gene56095 | MS.gene059288 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56095.t1 | MTR_1g041435 | 97.840 | 324 | 7 | 0 | 1 | 324 | 1 | 324 | 0.0 | 657 |
| MS.gene56095.t1 | MTR_1g041435 | 98.909 | 275 | 3 | 0 | 50 | 324 | 25 | 299 | 0.0 | 568 |
| MS.gene56095.t1 | MTR_5g012030 | 36.441 | 118 | 75 | 0 | 15 | 132 | 396 | 513 | 1.86e-19 | 89.4 |
| MS.gene56095.t1 | MTR_5g012030 | 36.364 | 99 | 63 | 0 | 15 | 113 | 6 | 104 | 1.01e-14 | 75.1 |
| MS.gene56095.t1 | MTR_7g115280 | 36.449 | 107 | 68 | 0 | 15 | 121 | 339 | 445 | 1.12e-15 | 77.8 |
| MS.gene56095.t1 | MTR_5g063200 | 30.252 | 119 | 79 | 1 | 1 | 119 | 438 | 552 | 2.54e-13 | 70.9 |
| MS.gene56095.t1 | MTR_3g452710 | 31.746 | 126 | 86 | 0 | 1 | 126 | 1 | 126 | 3.33e-13 | 70.5 |
| MS.gene56095.t1 | MTR_3g452710 | 31.746 | 126 | 86 | 0 | 1 | 126 | 1 | 126 | 3.46e-13 | 70.5 |
| MS.gene56095.t1 | MTR_2g078020 | 26.829 | 123 | 89 | 1 | 17 | 139 | 468 | 589 | 5.33e-13 | 70.1 |
| MS.gene56095.t1 | MTR_2g078020 | 26.829 | 123 | 89 | 1 | 17 | 139 | 468 | 589 | 6.31e-13 | 69.7 |
| MS.gene56095.t1 | MTR_3g087480 | 28.571 | 105 | 75 | 0 | 15 | 119 | 460 | 564 | 9.63e-13 | 69.3 |
| MS.gene56095.t1 | MTR_3g074230 | 27.049 | 122 | 88 | 1 | 18 | 139 | 431 | 551 | 6.40e-12 | 66.6 |
| MS.gene56095.t1 | MTR_3g074230 | 27.049 | 122 | 88 | 1 | 18 | 139 | 431 | 551 | 6.81e-12 | 66.6 |
| MS.gene56095.t1 | MTR_1g030300 | 31.538 | 130 | 87 | 2 | 13 | 140 | 183 | 312 | 6.43e-11 | 63.5 |
| MS.gene56095.t1 | MTR_5g009930 | 26.357 | 129 | 91 | 1 | 14 | 142 | 5 | 129 | 6.77e-11 | 62.8 |
| MS.gene56095.t1 | MTR_5g009930 | 26.357 | 129 | 91 | 1 | 14 | 142 | 5 | 129 | 8.79e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56095.t1 | AT1G04190 | 73.016 | 315 | 85 | 0 | 10 | 324 | 14 | 328 | 3.17e-180 | 501 |
| MS.gene56095.t1 | AT1G62740 | 38.983 | 118 | 72 | 0 | 15 | 132 | 386 | 503 | 5.64e-22 | 97.1 |
| MS.gene56095.t1 | AT1G62740 | 38.835 | 103 | 62 | 1 | 15 | 117 | 6 | 107 | 2.48e-14 | 73.9 |
| MS.gene56095.t1 | AT1G12270 | 36.441 | 118 | 75 | 0 | 15 | 132 | 387 | 504 | 2.61e-20 | 92.0 |
| MS.gene56095.t1 | AT1G12270 | 38.835 | 103 | 62 | 1 | 15 | 117 | 6 | 107 | 4.88e-13 | 70.1 |
| MS.gene56095.t1 | AT4G12400 | 37.288 | 118 | 74 | 0 | 15 | 132 | 373 | 490 | 1.15e-19 | 90.1 |
| MS.gene56095.t1 | AT4G12400 | 39.806 | 103 | 61 | 1 | 15 | 117 | 6 | 107 | 1.37e-16 | 80.9 |
| MS.gene56095.t1 | AT4G12400 | 37.288 | 118 | 74 | 0 | 15 | 132 | 373 | 490 | 1.39e-19 | 89.7 |
| MS.gene56095.t1 | AT4G12400 | 39.806 | 103 | 61 | 1 | 15 | 117 | 6 | 107 | 1.61e-16 | 80.5 |
| MS.gene56095.t1 | AT2G42810 | 33.871 | 124 | 81 | 1 | 3 | 126 | 6 | 128 | 3.76e-15 | 76.6 |
| MS.gene56095.t1 | AT2G42810 | 33.871 | 124 | 81 | 1 | 3 | 126 | 6 | 128 | 4.09e-15 | 76.3 |
| MS.gene56095.t1 | AT2G42810 | 33.871 | 124 | 81 | 1 | 3 | 126 | 6 | 128 | 4.23e-15 | 76.3 |
| MS.gene56095.t1 | AT2G42810 | 33.871 | 124 | 81 | 1 | 3 | 126 | 6 | 128 | 4.23e-15 | 76.3 |
| MS.gene56095.t1 | AT2G42810 | 33.871 | 124 | 81 | 1 | 3 | 126 | 6 | 128 | 4.23e-15 | 76.3 |
| MS.gene56095.t1 | AT3G04710 | 36.190 | 105 | 67 | 0 | 17 | 121 | 333 | 437 | 1.11e-14 | 74.7 |
| MS.gene56095.t1 | AT3G04710 | 36.190 | 105 | 67 | 0 | 17 | 121 | 334 | 438 | 1.16e-14 | 74.7 |
| MS.gene56095.t1 | AT3G04710 | 36.190 | 105 | 67 | 0 | 17 | 121 | 558 | 662 | 1.37e-14 | 75.1 |
| MS.gene56095.t1 | AT3G14950 | 31.967 | 122 | 81 | 2 | 14 | 133 | 261 | 382 | 1.05e-13 | 72.4 |
| MS.gene56095.t1 | AT1G78120 | 31.707 | 123 | 79 | 1 | 13 | 135 | 161 | 278 | 3.29e-13 | 70.5 |
| MS.gene56095.t1 | AT1G78120 | 26.415 | 106 | 78 | 0 | 18 | 123 | 401 | 506 | 6.85e-12 | 66.6 |
| MS.gene56095.t1 | AT5G10090 | 27.193 | 114 | 82 | 1 | 15 | 127 | 475 | 588 | 3.34e-13 | 70.5 |
| MS.gene56095.t1 | AT1G78120 | 31.707 | 123 | 79 | 1 | 13 | 135 | 161 | 278 | 3.64e-13 | 70.5 |
| MS.gene56095.t1 | AT5G65160 | 28.070 | 114 | 81 | 1 | 17 | 129 | 476 | 589 | 4.89e-13 | 70.1 |
| MS.gene56095.t1 | AT3G58620 | 24.648 | 142 | 107 | 0 | 15 | 156 | 453 | 594 | 1.03e-12 | 69.3 |
| MS.gene56095.t1 | AT3G58620 | 24.648 | 142 | 107 | 0 | 15 | 156 | 453 | 594 | 1.45e-12 | 68.9 |
| MS.gene56095.t1 | AT2G42580 | 27.143 | 140 | 98 | 2 | 15 | 152 | 462 | 599 | 5.66e-12 | 67.0 |
| MS.gene56095.t1 | AT1G53300 | 26.613 | 124 | 90 | 1 | 15 | 138 | 469 | 591 | 1.69e-11 | 65.5 |
| MS.gene56095.t1 | AT4G08320 | 30.075 | 133 | 92 | 1 | 2 | 133 | 166 | 298 | 1.71e-11 | 65.1 |
Find 58 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCAGGGATCCAGAAATTT+TGG | 0.181636 | 1.1:-25471474 | MS.gene56095:intron |
| AAACAGCTGCTGTGTGTTTC+TGG | 0.204324 | 1.1:+25472528 | None:intergenic |
| GCGCCAACGTCCAAAATTTC+TGG | 0.288254 | 1.1:+25471464 | None:intergenic |
| ACAATTGTACTAACCAATTC+AGG | 0.305169 | 1.1:+25474758 | None:intergenic |
| TTCAATACTTCTTGACTTTG+TGG | 0.320951 | 1.1:+25474887 | None:intergenic |
| TACATTTCCAGGGACATTTC+CGG | 0.326434 | 1.1:-25475296 | MS.gene56095:intron |
| ACCTTATCAATATTCACAAT+TGG | 0.335540 | 1.1:+25472756 | None:intergenic |
| CCTTATCAATATTCACAATT+GGG | 0.352170 | 1.1:+25472757 | None:intergenic |
| TTTCCGGAAGGGATGCATAT+TGG | 0.353524 | 1.1:-25475280 | MS.gene56095:CDS |
| GCTTCCATTTCCTTGATCCT+TGG | 0.353756 | 1.1:+25471712 | None:intergenic |
| GCTTGCTATCTTTCACTAGT+TGG | 0.356358 | 1.1:+25474846 | None:intergenic |
| TCAATACTTCTTGACTTTGT+GGG | 0.357106 | 1.1:+25474888 | None:intergenic |
| CTCTTGCAGTCTGAAAAGTA+TGG | 0.358770 | 1.1:-25472924 | MS.gene56095:intron |
| AGTTTACTTTCTTCCTGATA+AGG | 0.380004 | 1.1:-25472805 | MS.gene56095:CDS |
| CTCAAGAGCAGCCTGCTTAG+TGG | 0.383994 | 1.1:-25472472 | MS.gene56095:CDS |
| AGATACACTGAAGCCTGAAT+TGG | 0.385448 | 1.1:-25474771 | MS.gene56095:intron |
| TCAGTCAAGTACATTAAGAT+TGG | 0.390706 | 1.1:+25471402 | None:intergenic |
| TACATCATCATATCGTTTCA+TGG | 0.396873 | 1.1:+25475254 | None:intergenic |
| TATTCCCAGTTCAAATGAAA+AGG | 0.399079 | 1.1:-25471628 | MS.gene56095:CDS |
| CTTCAGTGTATCTAAATGTT+TGG | 0.401626 | 1.1:+25474781 | None:intergenic |
| TGCTGCAGCATTGCTACAAT+TGG | 0.401785 | 1.1:-25475463 | MS.gene56095:CDS |
| TCGGCATACTGCCTAAGAAA+TGG | 0.431760 | 1.1:+25472504 | None:intergenic |
| CCTCCAATATGCATCCCTTC+CGG | 0.435592 | 1.1:+25475277 | None:intergenic |
| CTATACTCAAGCCATCAAAA+AGG | 0.441533 | 1.1:-25477479 | MS.gene56095:CDS |
| AAGCTCTGAGATGTCTTTGA+AGG | 0.455578 | 1.1:-25477554 | MS.gene56095:CDS |
| CCCAATTGTGAATATTGATA+AGG | 0.468621 | 1.1:-25472757 | MS.gene56095:intron |
| AATTAAATTAAAACCCGAAT+GGG | 0.475131 | 1.1:-25475403 | MS.gene56095:CDS |
| ATTCCCAGTTCAAATGAAAA+GGG | 0.487057 | 1.1:-25471627 | MS.gene56095:CDS |
| TCTGGAAAGGCCAAGGATCA+AGG | 0.487214 | 1.1:-25471722 | MS.gene56095:CDS |
| CTCCTTCCGTGCGAAAATTG+TGG | 0.490264 | 1.1:-25471653 | MS.gene56095:CDS |
| AAGGCCAAGGATCAAGGAAA+TGG | 0.491879 | 1.1:-25471716 | MS.gene56095:CDS |
| AGTATGGATCTGAAGAAAGC+TGG | 0.495429 | 1.1:-25472908 | MS.gene56095:CDS |
| GTGTGTTTCTGGTGACTCAA+AGG | 0.501172 | 1.1:+25472539 | None:intergenic |
| ATTAAAACCCGAATGGGAAA+AGG | 0.501785 | 1.1:-25475397 | MS.gene56095:intron |
| CAGTCAAGTACATTAAGATT+GGG | 0.505176 | 1.1:+25471403 | None:intergenic |
| GAGATGTCTTTGAAGGATCA+AGG | 0.536135 | 1.1:-25477547 | MS.gene56095:CDS |
| TGGAAGCATGCACAGAATGA+TGG | 0.537108 | 1.1:-25471696 | MS.gene56095:CDS |
| TGGAGACTGCTGTAAAATCA+TGG | 0.542267 | 1.1:-25472854 | MS.gene56095:CDS |
| CTTATCAATATTCACAATTG+GGG | 0.543694 | 1.1:+25472758 | None:intergenic |
| AGCTATCTGAAAGGAAGCTA+AGG | 0.545730 | 1.1:+25474922 | None:intergenic |
| CTCATTCCTCGTCGAGACCA+TGG | 0.548485 | 1.1:-25472874 | MS.gene56095:CDS |
| CCGGAAGGGATGCATATTGG+AGG | 0.551327 | 1.1:-25475277 | MS.gene56095:CDS |
| TGTGTCTGCCAGGTCTGGAA+AGG | 0.560424 | 1.1:-25471735 | MS.gene56095:intron |
| AAACATCATTGCTTATCCAC+AGG | 0.566500 | 1.1:-25472442 | MS.gene56095:intron |
| TAGCAAGCGAGCTCAAGAAG+TGG | 0.567037 | 1.1:-25474831 | MS.gene56095:CDS |
| TGCCAGGTCTGGAAAGGCCA+AGG | 0.570453 | 1.1:-25471729 | MS.gene56095:intron |
| TTCCAGGGACATTTCCGGAA+GGG | 0.572993 | 1.1:-25475291 | MS.gene56095:intron |
| CAATTAAATTAAAACCCGAA+TGG | 0.579725 | 1.1:-25475404 | MS.gene56095:CDS |
| AAAAGGGACAGATACTGTGC+AGG | 0.590409 | 1.1:-25471611 | MS.gene56095:intron |
| ATGGCATGAAACTTCTTCAG+TGG | 0.598632 | 1.1:-25472835 | MS.gene56095:CDS |
| TGCTCTTGAGAAAGACTCCT+CGG | 0.607484 | 1.1:+25472485 | None:intergenic |
| TCAAGTACATTAAGATTGGG+AGG | 0.637826 | 1.1:+25471406 | None:intergenic |
| TATGAGATCGAATGTTGACA+TGG | 0.643506 | 1.1:-25474804 | MS.gene56095:CDS |
| TTATCAATATTCACAATTGG+GGG | 0.644295 | 1.1:+25472759 | None:intergenic |
| ATACTGCGAAGCTATCTGAA+AGG | 0.645570 | 1.1:+25474913 | None:intergenic |
| ATTTCTTAGGCAGTATGCCG+AGG | 0.649476 | 1.1:-25472502 | MS.gene56095:CDS |
| TTTCCAGGGACATTTCCGGA+AGG | 0.651002 | 1.1:-25475292 | MS.gene56095:intron |
| CAGTCTCCATGGTCTCGACG+AGG | 0.701435 | 1.1:+25472868 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAGATATGTATAAAT+AGG | - | chr1.1:25476666-25476685 | MS.gene56095:intron | 10.0% |
| !!! | ATTGAAAAATGTATTTTTAA+GGG | + | chr1.1:25473663-25473682 | None:intergenic | 10.0% |
| !! | AAAAATTATTCAAAAACTAG+AGG | + | chr1.1:25474484-25474503 | None:intergenic | 15.0% |
| !! | AAATAAATTGTATTATAGTG+TGG | + | chr1.1:25475059-25475078 | None:intergenic | 15.0% |
| !! | AAGGAATTTGAAAAATTAAT+AGG | + | chr1.1:25476271-25476290 | None:intergenic | 15.0% |
| !! | AATTAGAATGTTTCTTTAAA+AGG | + | chr1.1:25475006-25475025 | None:intergenic | 15.0% |
| !! | AATTTGAAAGAAAAAAGAAA+AGG | + | chr1.1:25471572-25471591 | None:intergenic | 15.0% |
| !! | ATTAAAGAAATTAACATAGA+AGG | + | chr1.1:25474615-25474634 | None:intergenic | 15.0% |
| !! | ATTGACAATTATAATAATAG+TGG | + | chr1.1:25473373-25473392 | None:intergenic | 15.0% |
| !! | ATTTGAAAGAAAAAAGAAAA+GGG | + | chr1.1:25471571-25471590 | None:intergenic | 15.0% |
| !! | TGGTAATCTTTATATAATTT+GGG | + | chr1.1:25474842-25474861 | None:intergenic | 15.0% |
| !!! | AAAAGAAAGTATAAATCAAA+AGG | + | chr1.1:25476822-25476841 | None:intergenic | 15.0% |
| !!! | AAGTGTTTTTATTATAGTTT+CGG | - | chr1.1:25471764-25471783 | MS.gene56095:intron | 15.0% |
| !!! | ATTTTGTAACTTTTTTCATT+TGG | - | chr1.1:25471589-25471608 | MS.gene56095:intron | 15.0% |
| !!! | CATTGAAAAATGTATTTTTA+AGG | + | chr1.1:25473664-25473683 | None:intergenic | 15.0% |
| !!! | TTATTTTAGACTATTGAATA+GGG | + | chr1.1:25474552-25474571 | None:intergenic | 15.0% |
| !!! | TTCAATAGTCTAAAATAAAA+CGG | - | chr1.1:25474554-25474573 | MS.gene56095:intron | 15.0% |
| !!! | TTTATTTTAGACTATTGAAT+AGG | + | chr1.1:25474553-25474572 | None:intergenic | 15.0% |
| !!! | TTTTGTAACTTTTTTCATTT+GGG | - | chr1.1:25471590-25471609 | MS.gene56095:intron | 15.0% |
| !! | AATTAAATTAAAACCCGAAT+GGG | - | chr1.1:25473589-25473608 | MS.gene56095:intron | 20.0% |
| !! | AGCATAAGATATTTATGAAT+TGG | + | chr1.1:25473471-25473490 | None:intergenic | 20.0% |
| !! | ATATAGGATATGATATGTTT+AGG | + | chr1.1:25474760-25474779 | None:intergenic | 20.0% |
| !! | ATATTGAAGAAGATAAAGAA+AGG | + | chr1.1:25476290-25476309 | None:intergenic | 20.0% |
| !! | ATTTCCTTTACAAGTTATAT+AGG | - | chr1.1:25473235-25473254 | MS.gene56095:intron | 20.0% |
| !! | CAATAACTAAAAAATTTAGC+AGG | + | chr1.1:25474015-25474034 | None:intergenic | 20.0% |
| !! | GCATAAGATATTTATGAATT+GGG | + | chr1.1:25473470-25473489 | None:intergenic | 20.0% |
| !! | GTGGTAATCTTTATATAATT+TGG | + | chr1.1:25474843-25474862 | None:intergenic | 20.0% |
| !! | TAAAATCATAATACCATACA+GGG | + | chr1.1:25476406-25476425 | None:intergenic | 20.0% |
| !! | TAAAGATATGTATAAATAGG+AGG | - | chr1.1:25476669-25476688 | MS.gene56095:intron | 20.0% |
| !! | TAGGGAAAATATTAGTTAAT+GGG | - | chr1.1:25476641-25476660 | MS.gene56095:intron | 20.0% |
| !! | TATTTATTTGATACGAGTAT+CGG | + | chr1.1:25474818-25474837 | None:intergenic | 20.0% |
| !! | TCTTAGTTCATTAATTATGA+AGG | - | chr1.1:25476585-25476604 | MS.gene56095:intron | 20.0% |
| !! | TTAAAATCATAATACCATAC+AGG | + | chr1.1:25476407-25476426 | None:intergenic | 20.0% |
| !! | TTAGGGAAAATATTAGTTAA+TGG | - | chr1.1:25476640-25476659 | MS.gene56095:intron | 20.0% |
| !! | TTTGTACTAAATACATATCT+CGG | + | chr1.1:25473883-25473902 | None:intergenic | 20.0% |
| !!! | AAGTTAGAATTTGTAGATTT+TGG | - | chr1.1:25472370-25472389 | MS.gene56095:intron | 20.0% |
| !!! | AATCAATTTGGTTTTATACT+CGG | + | chr1.1:25474941-25474960 | None:intergenic | 20.0% |
| !!! | AGAAAATTCATTTTATGTAC+TGG | - | chr1.1:25472776-25472795 | MS.gene56095:CDS | 20.0% |
| !!! | GAAAATTCATTTTATGTACT+GGG | - | chr1.1:25472777-25472796 | MS.gene56095:CDS | 20.0% |
| !!! | TATTTTTTTAGCAAATTGAG+TGG | - | chr1.1:25473395-25473414 | MS.gene56095:intron | 20.0% |
| !!! | TGTATTTTGAATGGAAATAA+TGG | + | chr1.1:25477006-25477025 | None:intergenic | 20.0% |
| ! | AAAAAAATAGTGAGAATCAG+AGG | + | chr1.1:25476888-25476907 | None:intergenic | 25.0% |
| ! | AAAAAATAGTGAGAATCAGA+GGG | + | chr1.1:25476887-25476906 | None:intergenic | 25.0% |
| ! | AAAACTACGGATAATCAATT+TGG | + | chr1.1:25474953-25474972 | None:intergenic | 25.0% |
| ! | AAATAAGTGCATCCAAAAAA+GGG | + | chr1.1:25477418-25477437 | None:intergenic | 25.0% |
| ! | AACTTATGAAAACAGCTTAT+AGG | - | chr1.1:25471931-25471950 | MS.gene56095:intron | 25.0% |
| ! | AAGAAAAAGAAGACATTGAT+AGG | + | chr1.1:25474581-25474600 | None:intergenic | 25.0% |
| ! | AAGGTAAAGTGATTTATGAT+TGG | + | chr1.1:25472456-25472475 | None:intergenic | 25.0% |
| ! | AATTACCAAACAAATAGCTT+AGG | - | chr1.1:25475568-25475587 | MS.gene56095:intron | 25.0% |
| ! | ACCTTATCAATATTCACAAT+TGG | + | chr1.1:25476239-25476258 | None:intergenic | 25.0% |
| ! | AGCATTAATTGTTGAATTTG+GGG | + | chr1.1:25475855-25475874 | None:intergenic | 25.0% |
| ! | AGTAAATGGAGTATACAATT+TGG | + | chr1.1:25476935-25476954 | None:intergenic | 25.0% |
| ! | ATAGGATAAAGAGTTAGTTA+GGG | - | chr1.1:25476623-25476642 | MS.gene56095:intron | 25.0% |
| ! | ATATAAAGATTACCACTATG+TGG | - | chr1.1:25474847-25474866 | MS.gene56095:CDS | 25.0% |
| ! | ATTGTATTATAGTGTGGATT+AGG | + | chr1.1:25475053-25475072 | None:intergenic | 25.0% |
| ! | ATTTATATGATAACCACTTG+GGG | - | chr1.1:25472014-25472033 | MS.gene56095:intron | 25.0% |
| ! | CAATTAAATTAAAACCCGAA+TGG | - | chr1.1:25473588-25473607 | MS.gene56095:intron | 25.0% |
| ! | CATTTATATGATAACCACTT+GGG | - | chr1.1:25472013-25472032 | MS.gene56095:intron | 25.0% |
| ! | CCAAGTACAAAATTCATAAA+AGG | + | chr1.1:25475472-25475491 | None:intergenic | 25.0% |
| ! | CCTTATCAATATTCACAATT+GGG | + | chr1.1:25476238-25476257 | None:intergenic | 25.0% |
| ! | CGTCATTTCTTAGAAAATAT+AGG | + | chr1.1:25474776-25474795 | None:intergenic | 25.0% |
| ! | CTAAATATACTTGCACATTT+GGG | - | chr1.1:25476331-25476350 | MS.gene56095:intron | 25.0% |
| ! | CTTATCAATATTCACAATTG+GGG | + | chr1.1:25476237-25476256 | None:intergenic | 25.0% |
| ! | GAGCATTAATTGTTGAATTT+GGG | + | chr1.1:25475856-25475875 | None:intergenic | 25.0% |
| ! | GAGTTATTTGTATGACAAAA+AGG | - | chr1.1:25475785-25475804 | MS.gene56095:intron | 25.0% |
| ! | TAAATAAGTGCATCCAAAAA+AGG | + | chr1.1:25477419-25477438 | None:intergenic | 25.0% |
| ! | TATAAAGATTACCACTATGT+GGG | - | chr1.1:25474848-25474867 | MS.gene56095:CDS | 25.0% |
| ! | TATAGGATAAAGAGTTAGTT+AGG | - | chr1.1:25476622-25476641 | MS.gene56095:intron | 25.0% |
| ! | TATTCAAAAACTAGAGGTTT+CGG | + | chr1.1:25474478-25474497 | None:intergenic | 25.0% |
| ! | TCACAAAATTTCATATGTGT+CGG | + | chr1.1:25474345-25474364 | None:intergenic | 25.0% |
| ! | TCTAAATATACTTGCACATT+TGG | - | chr1.1:25476330-25476349 | MS.gene56095:intron | 25.0% |
| ! | TGAAAAAGAAACCAAAACTA+CGG | + | chr1.1:25474966-25474985 | None:intergenic | 25.0% |
| ! | TGATCAAAAGTTAAGAGAAA+AGG | + | chr1.1:25473788-25473807 | None:intergenic | 25.0% |
| ! | TGGATAAATTCATGTAAAAG+TGG | + | chr1.1:25472436-25472455 | None:intergenic | 25.0% |
| ! | TTACTCACTTAACAAAGTAA+CGG | - | chr1.1:25475328-25475347 | MS.gene56095:intron | 25.0% |
| ! | TTATAGCATAAGTGAATGTT+TGG | + | chr1.1:25472549-25472568 | None:intergenic | 25.0% |
| ! | TTATCAATATTCACAATTGG+GGG | + | chr1.1:25476236-25476255 | None:intergenic | 25.0% |
| !! | AAATTGATTATCCGTAGTTT+TGG | - | chr1.1:25474952-25474971 | MS.gene56095:intron | 25.0% |
| !! | AGAGCATTAATTGTTGAATT+TGG | + | chr1.1:25475857-25475876 | None:intergenic | 25.0% |
| !! | ATATGAAATTTTGTGAAGCA+CGG | - | chr1.1:25474349-25474368 | MS.gene56095:intron | 25.0% |
| !! | CCTTTTATGAATTTTGTACT+TGG | - | chr1.1:25475469-25475488 | MS.gene56095:CDS | 25.0% |
| !! | GATTTATACTTTCTTTTCCA+TGG | - | chr1.1:25476825-25476844 | MS.gene56095:intron | 25.0% |
| !! | TAACTTGTAAAGGAAATGAA+AGG | + | chr1.1:25473232-25473251 | None:intergenic | 25.0% |
| !! | TAACTTTTGTGTGTGATTTT+TGG | + | chr1.1:25475662-25475681 | None:intergenic | 25.0% |
| !! | TCTCATTACTTTCTGTATTT+TGG | - | chr1.1:25475923-25475942 | MS.gene56095:intron | 25.0% |
| !!! | TGTATGTTTGGTTTCAATTT+TGG | - | chr1.1:25472247-25472266 | MS.gene56095:intron | 25.0% |
| !!! | TGTCTTTAGAATTTTCGTTA+GGG | - | chr1.1:25477070-25477089 | MS.gene56095:intron | 25.0% |
| !!! | TTGTCTTTAGAATTTTCGTT+AGG | - | chr1.1:25477069-25477088 | MS.gene56095:intron | 25.0% |
| !!! | TTTCTGACATTTTGTTTTTC+AGG | + | chr1.1:25475899-25475918 | None:intergenic | 25.0% |
| !!! | TTTTCTAAGAAATGACGTAT+CGG | - | chr1.1:25474779-25474798 | MS.gene56095:CDS | 25.0% |
| AAAATTGAGTCTGGCTAAAA+GGG | + | chr1.1:25472484-25472503 | None:intergenic | 30.0% | |
| AAAGTACAAGAAAAATAGCC+CGG | - | chr1.1:25472967-25472986 | MS.gene56095:intron | 30.0% | |
| AACACATTCAAAACTGAACA+GGG | - | chr1.1:25475819-25475838 | MS.gene56095:intron | 30.0% | |
| AAGAAATCAAAAGTTACCTG+TGG | + | chr1.1:25476569-25476588 | None:intergenic | 30.0% | |
| AAGTTATCATGGATAGCTTA+TGG | + | chr1.1:25471916-25471935 | None:intergenic | 30.0% | |
| AATGATATGAGTAGACAGAT+AGG | + | chr1.1:25476013-25476032 | None:intergenic | 30.0% | |
| AATGCTCTTAATCTAATCCA+AGG | - | chr1.1:25475721-25475740 | MS.gene56095:intron | 30.0% | |
| ACAAAAAGCAAGGTTGTTTA+AGG | - | chr1.1:25475275-25475294 | MS.gene56095:CDS | 30.0% | |
| ACAAAATCTACTAATCTGCA+AGG | + | chr1.1:25472690-25472709 | None:intergenic | 30.0% | |
| ACAAAATTCATAAAAGGAGC+CGG | + | chr1.1:25475466-25475485 | None:intergenic | 30.0% | |
| ACAATTGTACTAACCAATTC+AGG | + | chr1.1:25474237-25474256 | None:intergenic | 30.0% | |
| ACTATAGTGCTATAGAATAG+CGG | - | chr1.1:25473836-25473855 | MS.gene56095:intron | 30.0% | |
| ACTCCATTTACTTTGACAAA+TGG | - | chr1.1:25476943-25476962 | MS.gene56095:intron | 30.0% | |
| AGGAACCAATAAGAATTGAT+CGG | + | chr1.1:25477108-25477127 | None:intergenic | 30.0% | |
| AGTCAAATACAACATGAAAG+TGG | + | chr1.1:25473337-25473356 | None:intergenic | 30.0% | |
| AGTTTACTTTCTTCCTGATA+AGG | - | chr1.1:25476187-25476206 | MS.gene56095:intron | 30.0% | |
| ATTCCCAGTTCAAATGAAAA+GGG | - | chr1.1:25477365-25477384 | MS.gene56095:intron | 30.0% | |
| ATTGGTTAGTACAATTGTTC+TGG | - | chr1.1:25474239-25474258 | MS.gene56095:intron | 30.0% | |
| ATTTACTTTGACAAATGGAG+AGG | - | chr1.1:25476948-25476967 | MS.gene56095:intron | 30.0% | |
| CCCAATTGTGAATATTGATA+AGG | - | chr1.1:25476235-25476254 | MS.gene56095:intron | 30.0% | |
| CTTAAAATAAGGTTCTGTCT+GGG | - | chr1.1:25475595-25475614 | MS.gene56095:intron | 30.0% | |
| CTTCAGTGTATCTAAATGTT+TGG | + | chr1.1:25474214-25474233 | None:intergenic | 30.0% | |
| GCATTTATATGATAACCACT+TGG | - | chr1.1:25472012-25472031 | MS.gene56095:intron | 30.0% | |
| GCTAGAAGCTAATTCAAAAT+AGG | + | chr1.1:25472715-25472734 | None:intergenic | 30.0% | |
| GCTTAATTAAGTAGGAAAAG+TGG | - | chr1.1:25472623-25472642 | MS.gene56095:intron | 30.0% | |
| GCTTAGGAACTCTTAAAATA+AGG | - | chr1.1:25475584-25475603 | MS.gene56095:intron | 30.0% | |
| GGATTGAACAATAAAACTCA+AGG | + | chr1.1:25472415-25472434 | None:intergenic | 30.0% | |
| GTGGTTAATCAATATTGACA+TGG | + | chr1.1:25473318-25473337 | None:intergenic | 30.0% | |
| TAAAATTGAGTCTGGCTAAA+AGG | + | chr1.1:25472485-25472504 | None:intergenic | 30.0% | |
| TACATCATCATATCGTTTCA+TGG | + | chr1.1:25473741-25473760 | None:intergenic | 30.0% | |
| TAGCAAAAACACAAAAAGCA+AGG | - | chr1.1:25475265-25475284 | MS.gene56095:CDS | 30.0% | |
| TATCAATAGAGTAGTTGAAG+AGG | + | chr1.1:25474517-25474536 | None:intergenic | 30.0% | |
| TATTCCCAGTTCAAATGAAA+AGG | - | chr1.1:25477364-25477383 | MS.gene56095:intron | 30.0% | |
| TCAAAATACAAGTTCTGTGA+AGG | - | chr1.1:25477016-25477035 | MS.gene56095:intron | 30.0% | |
| TCAATACTTCTTGACTTTGT+GGG | + | chr1.1:25474107-25474126 | None:intergenic | 30.0% | |
| TCTCCATTTGTCAAAGTAAA+TGG | + | chr1.1:25476949-25476968 | None:intergenic | 30.0% | |
| TCTTAAAATAAGGTTCTGTC+TGG | - | chr1.1:25475594-25475613 | MS.gene56095:intron | 30.0% | |
| TGAAACCAAACATACACTAA+GGG | + | chr1.1:25472243-25472262 | None:intergenic | 30.0% | |
| TGATCTTGTAAAATTGAGTC+TGG | + | chr1.1:25472493-25472512 | None:intergenic | 30.0% | |
| TGGATTGTGATGAAATATGA+CGG | - | chr1.1:25472848-25472867 | MS.gene56095:CDS | 30.0% | |
| TGTCAAAATAGCGAATATAG+CGG | - | chr1.1:25473812-25473831 | MS.gene56095:intron | 30.0% | |
| TGTTATTCATAAGCTTGTCA+AGG | - | chr1.1:25472086-25472105 | MS.gene56095:intron | 30.0% | |
| TTAAAATAAGGTTCTGTCTG+GGG | - | chr1.1:25475596-25475615 | MS.gene56095:intron | 30.0% | |
| TTCAATACTTCTTGACTTTG+TGG | + | chr1.1:25474108-25474127 | None:intergenic | 30.0% | |
| TTCCATAAAAATCACTGTCA+CGG | - | chr1.1:25473156-25473175 | MS.gene56095:intron | 30.0% | |
| TTGAAACCAAACATACACTA+AGG | + | chr1.1:25472244-25472263 | None:intergenic | 30.0% | |
| TTGCTTGTGTGAATATTTGT+AGG | - | chr1.1:25474047-25474066 | MS.gene56095:intron | 30.0% | |
| TTTAACAACCCATGAAAGAA+TGG | + | chr1.1:25475090-25475109 | None:intergenic | 30.0% | |
| TTTAGCAAATTGAGTGGTTT+CGG | - | chr1.1:25473401-25473420 | MS.gene56095:intron | 30.0% | |
| TTTATATGCATGTTCTTTGC+TGG | - | chr1.1:25474647-25474666 | MS.gene56095:intron | 30.0% | |
| TTTCACTTGATTCTGTTGTT+GGG | - | chr1.1:25471620-25471639 | MS.gene56095:CDS | 30.0% | |
| ! | AATAAACCACAATTTTCGCA+CGG | + | chr1.1:25477348-25477367 | None:intergenic | 30.0% |
| ! | AGGTGCTTGATTTGAATTTA+TGG | + | chr1.1:25475510-25475529 | None:intergenic | 30.0% |
| ! | CACTCCTATATAACTTGTAA+AGG | + | chr1.1:25473242-25473261 | None:intergenic | 30.0% |
| ! | GGTGCTTGATTTGAATTTAT+GGG | + | chr1.1:25475509-25475528 | None:intergenic | 30.0% |
| ! | GTCAATGTCTAGAATAATGT+TGG | - | chr1.1:25475237-25475256 | MS.gene56095:intron | 30.0% |
| ! | TAAAAAGTGTGGGATTTGAA+GGG | + | chr1.1:25471540-25471559 | None:intergenic | 30.0% |
| ! | TGGATAAGCAATGATGTTTT+TGG | + | chr1.1:25476549-25476568 | None:intergenic | 30.0% |
| ! | TTCTTTAAAAGGTGATTGAG+CGG | + | chr1.1:25474995-25475014 | None:intergenic | 30.0% |
| ! | TTTTAATAAAACCCGTATCC+CGG | - | chr1.1:25475444-25475463 | MS.gene56095:CDS | 30.0% |
| ! | TTTTCACTTGATTCTGTTGT+TGG | - | chr1.1:25471619-25471638 | MS.gene56095:CDS | 30.0% |
| !! | AATTCTTATTGGTTCCTCTA+AGG | - | chr1.1:25477111-25477130 | MS.gene56095:intron | 30.0% |
| !! | AGAGTTGATTTTGACATGTT+TGG | - | chr1.1:25472297-25472316 | MS.gene56095:intron | 30.0% |
| !! | ATGTTTGGTTTCAATTTTGG+TGG | - | chr1.1:25472250-25472269 | MS.gene56095:intron | 30.0% |
| !! | CACAGAACTTGTATTTTGAA+TGG | + | chr1.1:25477015-25477034 | None:intergenic | 30.0% |
| !! | GCTGTTTTCATAAGTTATCA+TGG | + | chr1.1:25471927-25471946 | None:intergenic | 30.0% |
| !! | TGTTTGGTTTCAATTTTGGT+GGG | - | chr1.1:25472251-25472270 | MS.gene56095:intron | 30.0% |
| !! | TTATAGTGTGGATTAGGAAT+TGG | + | chr1.1:25475047-25475066 | None:intergenic | 30.0% |
| !!! | ATGTGCATGTCTTTTTTTAG+TGG | - | chr1.1:25477045-25477064 | MS.gene56095:intron | 30.0% |
| !!! | GGATACGGGTTTTATTAAAA+AGG | + | chr1.1:25475444-25475463 | None:intergenic | 30.0% |
| !!! | GGTTTTATTAAAAAGGTGCA+GGG | + | chr1.1:25475437-25475456 | None:intergenic | 30.0% |
| !!! | TAAGTGAATGTTTGGTTTTG+CGG | + | chr1.1:25472541-25472560 | None:intergenic | 30.0% |
| !!! | TGGCATTGTCATCTTATTTT+CGG | - | chr1.1:25473066-25473085 | MS.gene56095:intron | 30.0% |
| AAACATCATTGCTTATCCAC+AGG | - | chr1.1:25476550-25476569 | MS.gene56095:intron | 35.0% | |
| AAACTCACATTGAAAGCTTC+CGG | - | chr1.1:25475146-25475165 | MS.gene56095:intron | 35.0% | |
| AATCAGAGGGATAAAAGAGA+AGG | + | chr1.1:25476874-25476893 | None:intergenic | 35.0% | |
| ACCAATAAGAATTGATCGGA+TGG | + | chr1.1:25477104-25477123 | None:intergenic | 35.0% | |
| ACGTATCATAACAGATACGT+TGG | - | chr1.1:25474416-25474435 | MS.gene56095:intron | 35.0% | |
| ACTCAATAAAGTTCCCTGTA+TGG | - | chr1.1:25476390-25476409 | MS.gene56095:intron | 35.0% | |
| ACTTGAGAACTCTTAAAGTG+AGG | + | chr1.1:25475530-25475549 | None:intergenic | 35.0% | |
| ATTAAAACCCGAATGGGAAA+AGG | - | chr1.1:25473595-25473614 | MS.gene56095:intron | 35.0% | |
| ATTATGAAGGTGAGTCTGTT+AGG | - | chr1.1:25476598-25476617 | MS.gene56095:intron | 35.0% | |
| CAAAATTCATAAAAGGAGCC+GGG | + | chr1.1:25475465-25475484 | None:intergenic | 35.0% | |
| CAACACATTCAAAACTGAAC+AGG | - | chr1.1:25475818-25475837 | MS.gene56095:intron | 35.0% | |
| CCAGTATATTCCCCAATAAT+CGG | + | chr1.1:25472831-25472850 | None:intergenic | 35.0% | |
| CCTATATTGTCTTCTGTAGA+AGG | + | chr1.1:25476788-25476807 | None:intergenic | 35.0% | |
| CCTTCTACAGAAGACAATAT+AGG | - | chr1.1:25476785-25476804 | MS.gene56095:intron | 35.0% | |
| CGTATCATAACAGATACGTT+GGG | - | chr1.1:25474417-25474436 | MS.gene56095:intron | 35.0% | |
| CTATACTCAAGCCATCAAAA+AGG | - | chr1.1:25471513-25471532 | MS.gene56095:intron | 35.0% | |
| GAGTTCCTAAGCTATTTGTT+TGG | + | chr1.1:25475576-25475595 | None:intergenic | 35.0% | |
| GGAATTCTCTCTTTAAACTC+CGG | + | chr1.1:25473201-25473220 | None:intergenic | 35.0% | |
| GGAGTTACGTATTTAAACTG+TGG | - | chr1.1:25473422-25473441 | MS.gene56095:intron | 35.0% | |
| TAAAATAAGGTTCTGTCTGG+GGG | - | chr1.1:25475597-25475616 | MS.gene56095:intron | 35.0% | |
| TAGTAGAGAATCAGCATAAC+CGG | - | chr1.1:25473179-25473198 | MS.gene56095:intron | 35.0% | |
| TATGAGATCGAATGTTGACA+TGG | - | chr1.1:25474188-25474207 | MS.gene56095:intron | 35.0% | |
| TCCATCCGATCAATTCTTAT+TGG | - | chr1.1:25477100-25477119 | MS.gene56095:intron | 35.0% | |
| TCTGCTTGAATACATTTCCA+GGG | - | chr1.1:25473686-25473705 | MS.gene56095:intron | 35.0% | |
| TTCACACAAGCAAATGTATC+AGG | + | chr1.1:25474040-25474059 | None:intergenic | 35.0% | |
| TTCTGCTTGAATACATTTCC+AGG | - | chr1.1:25473685-25473704 | MS.gene56095:intron | 35.0% | |
| ! | AAGAGCTATTTGGTTTCGAA+AGG | + | chr1.1:25473011-25473030 | None:intergenic | 35.0% |
| ! | AAGCTTGAATGCCGATTATT+GGG | - | chr1.1:25472817-25472836 | MS.gene56095:CDS | 35.0% |
| ! | AGAGCTATTTGGTTTCGAAA+GGG | + | chr1.1:25473010-25473029 | None:intergenic | 35.0% |
| ! | AGATCTTACCTTTTCCCATT+CGG | + | chr1.1:25473606-25473625 | None:intergenic | 35.0% |
| ! | ATTATGTGGCTTTTGTCAGA+GGG | - | chr1.1:25475379-25475398 | MS.gene56095:intron | 35.0% |
| ! | ATTTGAAGGGTCCTTTTTGA+TGG | + | chr1.1:25471527-25471546 | None:intergenic | 35.0% |
| ! | CATTGTGGTTTTCTTGATCT+GGG | - | chr1.1:25471672-25471691 | MS.gene56095:CDS | 35.0% |
| ! | CTAAAAAGTGTGGGATTTGA+AGG | + | chr1.1:25471541-25471560 | None:intergenic | 35.0% |
| ! | CTTTTGGATTTTAAACTCCC+CGG | - | chr1.1:25475197-25475216 | MS.gene56095:intron | 35.0% |
| ! | GCTAAAGCGCTTAATTAAGT+AGG | - | chr1.1:25472615-25472634 | MS.gene56095:intron | 35.0% |
| ! | GCTTGATTTGAATTTATGGG+AGG | + | chr1.1:25475506-25475525 | None:intergenic | 35.0% |
| ! | GGGAGTTTAAAATCCAAAAG+TGG | + | chr1.1:25475197-25475216 | None:intergenic | 35.0% |
| ! | TACCGTGACAGTGATTTTTA+TGG | + | chr1.1:25473161-25473180 | None:intergenic | 35.0% |
| ! | TGGCAAAAAGTAACCACTTT+TGG | - | chr1.1:25475181-25475200 | MS.gene56095:intron | 35.0% |
| ! | TGTATACCTTGCTATGTTCA+GGG | - | chr1.1:25477503-25477522 | MS.gene56095:CDS | 35.0% |
| ! | TGTCCCTTTTCATTTGAACT+GGG | + | chr1.1:25477371-25477390 | None:intergenic | 35.0% |
| ! | TTGTATACCTTGCTATGTTC+AGG | - | chr1.1:25477502-25477521 | MS.gene56095:CDS | 35.0% |
| ! | TTTGACTGAGTTGAGACTTA+CGG | - | chr1.1:25473112-25473131 | MS.gene56095:intron | 35.0% |
| ! | TTTGGGATAATCTTTCTCGT+TGG | - | chr1.1:25476348-25476367 | MS.gene56095:intron | 35.0% |
| !! | ACTGCTTTTGATTGGAAGTT+GGG | - | chr1.1:25473986-25474005 | MS.gene56095:intron | 35.0% |
| !! | CTTCAAATCCCACACTTTTT+AGG | - | chr1.1:25471539-25471558 | MS.gene56095:intron | 35.0% |
| !! | GTTTGGTTTCAATTTTGGTG+GGG | - | chr1.1:25472252-25472271 | MS.gene56095:intron | 35.0% |
| !! | TAATCTTTCTCGTTGGCTTA+TGG | - | chr1.1:25476355-25476374 | MS.gene56095:intron | 35.0% |
| !! | TTGACAACACTGCTTTTGAT+TGG | - | chr1.1:25473978-25473997 | MS.gene56095:intron | 35.0% |
| !!! | AAATCCCACACTTTTTAGGT+AGG | - | chr1.1:25471543-25471562 | MS.gene56095:intron | 35.0% |
| !!! | ACGTTGATTTTGATACTCTC+CGG | + | chr1.1:25475219-25475238 | None:intergenic | 35.0% |
| !!! | GGGTTTTATTAAAAAGGTGC+AGG | + | chr1.1:25475438-25475457 | None:intergenic | 35.0% |
| AAAAATACATGACCCATCCC+AGG | + | chr1.1:25477149-25477168 | None:intergenic | 40.0% | |
| AACAACCCATGAAAGAATGG+CGG | + | chr1.1:25475087-25475106 | None:intergenic | 40.0% | |
| AACTCACATTGAAAGCTTCC+GGG | - | chr1.1:25475147-25475166 | MS.gene56095:intron | 40.0% | |
| AAGCATAAAGCTAGCATCCA+TGG | + | chr1.1:25476845-25476864 | None:intergenic | 40.0% | |
| AAGTGATCGAAGGCTCTATT+TGG | + | chr1.1:25472593-25472612 | None:intergenic | 40.0% | |
| AAGTGCATCCAAAAAAGGGT+GGG | + | chr1.1:25477414-25477433 | None:intergenic | 40.0% | |
| ACATGCCCTTAGTGTATGTT+TGG | - | chr1.1:25472235-25472254 | MS.gene56095:intron | 40.0% | |
| AGAGGGATAAAAGAGAAGGA+AGG | + | chr1.1:25476870-25476889 | None:intergenic | 40.0% | |
| AGAGTTCTCAAGTGAAGAGT+TGG | - | chr1.1:25475537-25475556 | MS.gene56095:intron | 40.0% | |
| AGATACACTGAAGCCTGAAT+TGG | - | chr1.1:25474221-25474240 | MS.gene56095:intron | 40.0% | |
| AGATTACCACTATGTGGGAT+TGG | - | chr1.1:25474853-25474872 | MS.gene56095:CDS | 40.0% | |
| AGCCACATAATGATTTGACG+TGG | + | chr1.1:25475370-25475389 | None:intergenic | 40.0% | |
| AGCTATCTGAAAGGAAGCTA+AGG | + | chr1.1:25474073-25474092 | None:intergenic | 40.0% | |
| AGGTGAGTCTGTTAGGTTAT+AGG | - | chr1.1:25476605-25476624 | MS.gene56095:intron | 40.0% | |
| AGTATGGATCTGAAGAAAGC+TGG | - | chr1.1:25476084-25476103 | MS.gene56095:intron | 40.0% | |
| AGTTATTCAGATTGTGCGAG+AGG | - | chr1.1:25476707-25476726 | MS.gene56095:intron | 40.0% | |
| ATAACACTTGTGAGACTGTG+TGG | - | chr1.1:25471832-25471851 | MS.gene56095:intron | 40.0% | |
| ATACTGCGAAGCTATCTGAA+AGG | + | chr1.1:25474082-25474101 | None:intergenic | 40.0% | |
| ATCTAACCAATCCCACATAG+TGG | + | chr1.1:25474862-25474881 | None:intergenic | 40.0% | |
| ATGGCATGAAACTTCTTCAG+TGG | - | chr1.1:25476157-25476176 | MS.gene56095:intron | 40.0% | |
| CAATGCCATTGTTTAGCAGT+AGG | + | chr1.1:25473054-25473073 | None:intergenic | 40.0% | |
| CACATAATGATTTGACGTGG+TGG | + | chr1.1:25475367-25475386 | None:intergenic | 40.0% | |
| CACCACGTCAAATCATTATG+TGG | - | chr1.1:25475365-25475384 | MS.gene56095:intron | 40.0% | |
| CATGCTAGTTGAGCACTATT+AGG | + | chr1.1:25474272-25474291 | None:intergenic | 40.0% | |
| CCGATTATTGGGGAATATAC+TGG | - | chr1.1:25472828-25472847 | MS.gene56095:CDS | 40.0% | |
| CTCTTGCAGTCTGAAAAGTA+TGG | - | chr1.1:25476068-25476087 | MS.gene56095:intron | 40.0% | |
| CTGCAAAGCAAAGAGCTATT+TGG | + | chr1.1:25473021-25473040 | None:intergenic | 40.0% | |
| GACCCACATCGTTATTTACA+GGG | + | chr1.1:25472903-25472922 | None:intergenic | 40.0% | |
| GATACTTACCAGACACGTTA+CGG | + | chr1.1:25474392-25474411 | None:intergenic | 40.0% | |
| GATCTCCTACTGCTAAACAA+TGG | - | chr1.1:25473046-25473065 | MS.gene56095:intron | 40.0% | |
| GCTTTAGCATAAGTGATCGA+AGG | + | chr1.1:25472603-25472622 | None:intergenic | 40.0% | |
| GGATCTTTACTCTAGCTACA+TGG | - | chr1.1:25476969-25476988 | MS.gene56095:intron | 40.0% | |
| GTAAGTCTCAACTCAGTCAA+AGG | + | chr1.1:25473113-25473132 | None:intergenic | 40.0% | |
| TAACACTTGTGAGACTGTGT+GGG | - | chr1.1:25471833-25471852 | MS.gene56095:intron | 40.0% | |
| TAAGGTTCTCTACTATGCCT+GGG | - | chr1.1:25477129-25477148 | MS.gene56095:intron | 40.0% | |
| TAAGTGCATCCAAAAAAGGG+TGG | + | chr1.1:25477415-25477434 | None:intergenic | 40.0% | |
| TACATTTCCAGGGACATTTC+CGG | - | chr1.1:25473696-25473715 | MS.gene56095:intron | 40.0% | |
| TCAACTCAGTCAAAGGCTTT+GGG | + | chr1.1:25473106-25473125 | None:intergenic | 40.0% | |
| TGACCCACATCGTTATTTAC+AGG | + | chr1.1:25472904-25472923 | None:intergenic | 40.0% | |
| TGGAGACTGCTGTAAAATCA+TGG | - | chr1.1:25476138-25476157 | MS.gene56095:intron | 40.0% | |
| TGTGATGAAATATGACGGTG+CGG | - | chr1.1:25472853-25472872 | MS.gene56095:CDS | 40.0% | |
| TTTATACTCGGTAGATCACC+AGG | + | chr1.1:25474929-25474948 | None:intergenic | 40.0% | |
| TTTCTCCGCCATTCTTTCAT+GGG | - | chr1.1:25475079-25475098 | MS.gene56095:intron | 40.0% | |
| ! | ACATACACTAAGGGCATGTT+TGG | + | chr1.1:25472234-25472253 | None:intergenic | 40.0% |
| ! | AGCTTGAATGCCGATTATTG+GGG | - | chr1.1:25472818-25472837 | MS.gene56095:CDS | 40.0% |
| ! | CATACTTTTCAGACTGCAAG+AGG | + | chr1.1:25476070-25476089 | None:intergenic | 40.0% |
| ! | CATTATGTGGCTTTTGTCAG+AGG | - | chr1.1:25475378-25475397 | MS.gene56095:intron | 40.0% |
| ! | CTGTCCCTTTTCATTTGAAC+TGG | + | chr1.1:25477372-25477391 | None:intergenic | 40.0% |
| ! | GAAGCTTGAATGCCGATTAT+TGG | - | chr1.1:25472816-25472835 | MS.gene56095:CDS | 40.0% |
| ! | GAGATGTCTTTGAAGGATCA+AGG | - | chr1.1:25471445-25471464 | MS.gene56095:CDS | 40.0% |
| ! | GATCCAGAAATTTTGGACGT+TGG | - | chr1.1:25477525-25477544 | MS.gene56095:CDS | 40.0% |
| ! | GATCTTACCTTTTCCCATTC+GGG | + | chr1.1:25473605-25473624 | None:intergenic | 40.0% |
| ! | GCATTGTGGTTTTCTTGATC+TGG | - | chr1.1:25471671-25471690 | MS.gene56095:CDS | 40.0% |
| ! | GGTACCTACCTAAAAAGTGT+GGG | + | chr1.1:25471550-25471569 | None:intergenic | 40.0% |
| ! | GTCTTTTCTTTGAACAAGCG+AGG | + | chr1.1:25477567-25477586 | None:intergenic | 40.0% |
| ! | GTTCAGGGATCCAGAAATTT+TGG | - | chr1.1:25477518-25477537 | MS.gene56095:CDS | 40.0% |
| ! | TGATTTTACAGCAGTCTCCA+TGG | + | chr1.1:25476138-25476157 | None:intergenic | 40.0% |
| ! | TGTGTCTCATTCCATTTTCC+AGG | - | chr1.1:25476430-25476449 | MS.gene56095:intron | 40.0% |
| ! | TTTTCTCCGCCATTCTTTCA+TGG | - | chr1.1:25475078-25475097 | MS.gene56095:intron | 40.0% |
| !! | AAGCTCTGAGATGTCTTTGA+AGG | - | chr1.1:25471438-25471457 | MS.gene56095:CDS | 40.0% |
| !! | ACTATGTGGGATTGGTTAGA+TGG | - | chr1.1:25474861-25474880 | MS.gene56095:CDS | 40.0% |
| !! | CAACTTGTTGCTACGAATGA+TGG | + | chr1.1:25474902-25474921 | None:intergenic | 40.0% |
| !! | CACTGCTTTTGATTGGAAGT+TGG | - | chr1.1:25473985-25474004 | MS.gene56095:intron | 40.0% |
| !! | CTTCTGTAGAAGGCACTATT+AGG | + | chr1.1:25476778-25476797 | None:intergenic | 40.0% |
| !! | GCAGCTGTTTTCCATTTCTT+AGG | - | chr1.1:25476477-25476496 | MS.gene56095:intron | 40.0% |
| !! | GCTTGCTATCTTTCACTAGT+TGG | + | chr1.1:25474149-25474168 | None:intergenic | 40.0% |
| !! | GTGTGGATTAGGAATTGGAA+TGG | + | chr1.1:25475042-25475061 | None:intergenic | 40.0% |
| !! | GTTGATTTTGATACTCTCCG+GGG | + | chr1.1:25475217-25475236 | None:intergenic | 40.0% |
| !! | GTTGTTTTGTCACTGCATTG+TGG | - | chr1.1:25471657-25471676 | MS.gene56095:CDS | 40.0% |
| !!! | CGTTGATTTTGATACTCTCC+GGG | + | chr1.1:25475218-25475237 | None:intergenic | 40.0% |
| !!! | GGTAACGAGTTTTTCAAGTC+AGG | - | chr1.1:25471466-25471485 | MS.gene56095:CDS | 40.0% |
| AAAAGGGACAGATACTGTGC+AGG | - | chr1.1:25477381-25477400 | MS.gene56095:intron | 45.0% | |
| AAACAGCTGCTGTGTGTTTC+TGG | + | chr1.1:25476467-25476486 | None:intergenic | 45.0% | |
| AACAACATTCTGTGTCTGCC+AGG | - | chr1.1:25477247-25477266 | MS.gene56095:intron | 45.0% | |
| AAGGCCAAGGATCAAGGAAA+TGG | - | chr1.1:25477276-25477295 | MS.gene56095:intron | 45.0% | |
| ACATGCGAGTGGCGTTAAAT+TGG | - | chr1.1:25475298-25475317 | MS.gene56095:intron | 45.0% | |
| AGGGCCAGTCACTTAGATTA+GGG | + | chr1.1:25472884-25472903 | None:intergenic | 45.0% | |
| ATTTCTTAGGCAGTATGCCG+AGG | - | chr1.1:25476490-25476509 | MS.gene56095:intron | 45.0% | |
| CAAAACAGAGCACAAGCCAT+TGG | + | chr1.1:25474448-25474467 | None:intergenic | 45.0% | |
| CATGCGAGTGGCGTTAAATT+GGG | - | chr1.1:25475299-25475318 | MS.gene56095:intron | 45.0% | |
| CTAAGGTTCTCTACTATGCC+TGG | - | chr1.1:25477128-25477147 | MS.gene56095:intron | 45.0% | |
| CTAATCCAAGGTTCGACGAA+TGG | - | chr1.1:25475733-25475752 | MS.gene56095:intron | 45.0% | |
| CTCAACTCAGTCAAAGGCTT+TGG | + | chr1.1:25473107-25473126 | None:intergenic | 45.0% | |
| GCTTCCATTTCCTTGATCCT+TGG | + | chr1.1:25477283-25477302 | None:intergenic | 45.0% | |
| GGCATAGTAGAGAACCTTAG+AGG | + | chr1.1:25477128-25477147 | None:intergenic | 45.0% | |
| GGCCCTGTAAATAACGATGT+GGG | - | chr1.1:25472898-25472917 | MS.gene56095:CDS | 45.0% | |
| GGGTACCTACCTAAAAAGTG+TGG | + | chr1.1:25471551-25471570 | None:intergenic | 45.0% | |
| GTTGTTTAAGGACATGCGAG+TGG | - | chr1.1:25475287-25475306 | MS.gene56095:CDS | 45.0% | |
| TAAGTCCATTCGTCGAACCT+TGG | + | chr1.1:25475741-25475760 | None:intergenic | 45.0% | |
| TAGCCCCTAATCTAAGTGAC+TGG | - | chr1.1:25472877-25472896 | MS.gene56095:CDS | 45.0% | |
| TCATAAAAGGAGCCGGGATA+CGG | + | chr1.1:25475459-25475478 | None:intergenic | 45.0% | |
| TCGGCATACTGCCTAAGAAA+TGG | + | chr1.1:25476491-25476510 | None:intergenic | 45.0% | |
| TCTGGCTAAAAGGGAGTTGA+AGG | + | chr1.1:25472475-25472494 | None:intergenic | 45.0% | |
| TGACTCAAAGGCCTGGAAAA+TGG | + | chr1.1:25476444-25476463 | None:intergenic | 45.0% | |
| TGCTCTTGAGAAAGACTCCT+CGG | + | chr1.1:25476510-25476529 | None:intergenic | 45.0% | |
| TGCTGCAGCATTGCTACAAT+TGG | - | chr1.1:25473529-25473548 | MS.gene56095:intron | 45.0% | |
| TGGCCCTGTAAATAACGATG+TGG | - | chr1.1:25472897-25472916 | MS.gene56095:CDS | 45.0% | |
| TTCTCTACTATGCCTGGGAT+GGG | - | chr1.1:25477134-25477153 | MS.gene56095:intron | 45.0% | |
| TTTCCGGAAGGGATGCATAT+TGG | - | chr1.1:25473712-25473731 | MS.gene56095:intron | 45.0% | |
| ! | AACCACAATTTTCGCACGGA+AGG | + | chr1.1:25477344-25477363 | None:intergenic | 45.0% |
| ! | CACTAAGGGCATGTTTGGAT+TGG | + | chr1.1:25472229-25472248 | None:intergenic | 45.0% |
| ! | GTCTGCGTCTTTTCCTTATC+AGG | + | chr1.1:25476203-25476222 | None:intergenic | 45.0% |
| ! | TGGAAGCATGCACAGAATGA+TGG | - | chr1.1:25477296-25477315 | MS.gene56095:intron | 45.0% |
| ! | TGGTTTCGAAAGGGTGTACA+CGG | + | chr1.1:25473001-25473020 | None:intergenic | 45.0% |
| ! | TGTTGCTACGAATGATGGAG+CGG | + | chr1.1:25474897-25474916 | None:intergenic | 45.0% |
| !! | AGGAAATGAAAGGTACTCGC+TGG | + | chr1.1:25473222-25473241 | None:intergenic | 45.0% |
| !! | CAGTCAAAGGCTTTGGGTTA+AGG | + | chr1.1:25473100-25473119 | None:intergenic | 45.0% |
| !! | GTGTGTTTCTGGTGACTCAA+AGG | + | chr1.1:25476456-25476475 | None:intergenic | 45.0% |
| !!! | GGTTACTTTTTGCCACCACT+TGG | + | chr1.1:25475176-25475195 | None:intergenic | 45.0% |
| !!! | GTTTCTCTCCCACCCTTTTT+TGG | - | chr1.1:25477403-25477422 | MS.gene56095:intron | 45.0% |
| ACACGTTACGGCGAGGAAAT+TGG | + | chr1.1:25474380-25474399 | None:intergenic | 50.0% | |
| CAATGCTGCAGCACGATTAC+TGG | + | chr1.1:25473522-25473541 | None:intergenic | 50.0% | |
| CAGGGCCAGTCACTTAGATT+AGG | + | chr1.1:25472885-25472904 | None:intergenic | 50.0% | |
| CATAAAAGGAGCCGGGATAC+GGG | + | chr1.1:25475458-25475477 | None:intergenic | 50.0% | |
| CCTCCAATATGCATCCCTTC+CGG | + | chr1.1:25473718-25473737 | None:intergenic | 50.0% | |
| CTCCTTCCGTGCGAAAATTG+TGG | - | chr1.1:25477339-25477358 | MS.gene56095:intron | 50.0% | |
| CTGGATCCCTGAACATAGCA+AGG | + | chr1.1:25477512-25477531 | None:intergenic | 50.0% | |
| GATACGTTGGGATGCACCAA+TGG | - | chr1.1:25474429-25474448 | MS.gene56095:intron | 50.0% | |
| GCGCCAACGTCCAAAATTTC+TGG | + | chr1.1:25477531-25477550 | None:intergenic | 50.0% | |
| GGGCCAGTCACTTAGATTAG+GGG | + | chr1.1:25472883-25472902 | None:intergenic | 50.0% | |
| GTAGCAACAAGTTGCTGTCC+TGG | - | chr1.1:25474908-25474927 | MS.gene56095:CDS | 50.0% | |
| GTTCTCTACTATGCCTGGGA+TGG | - | chr1.1:25477133-25477152 | MS.gene56095:intron | 50.0% | |
| TAGCAAGCGAGCTCAAGAAG+TGG | - | chr1.1:25474161-25474180 | MS.gene56095:intron | 50.0% | |
| TCAAATAGCGCGCTAGAGCA+CGG | - | chr1.1:25473909-25473928 | MS.gene56095:intron | 50.0% | |
| TCACATTGAAAGCTTCCGGG+TGG | - | chr1.1:25475150-25475169 | MS.gene56095:intron | 50.0% | |
| TCTGGAAAGGCCAAGGATCA+AGG | - | chr1.1:25477270-25477289 | MS.gene56095:intron | 50.0% | |
| TTCCAGGGACATTTCCGGAA+GGG | - | chr1.1:25473701-25473720 | MS.gene56095:intron | 50.0% | |
| TTTCCAGGGACATTTCCGGA+AGG | - | chr1.1:25473700-25473719 | MS.gene56095:intron | 50.0% | |
| ! | CGAATGATGGAGCGGTAAGA+AGG | + | chr1.1:25474889-25474908 | None:intergenic | 50.0% |
| ! | GGTTTCGAAAGGGTGTACAC+GGG | + | chr1.1:25473000-25473019 | None:intergenic | 50.0% |
| ! | TTTCTGGTGACTCAAAGGCC+TGG | + | chr1.1:25476451-25476470 | None:intergenic | 50.0% |
| !! | GACGTGGTGGCTTTAGATTG+TGG | + | chr1.1:25475354-25475373 | None:intergenic | 50.0% |
| !!! | GTTTTTGGCAGCCACTAAGC+AGG | + | chr1.1:25476534-25476553 | None:intergenic | 50.0% |
| ATCCCTTCCGGAAATGTCCC+TGG | + | chr1.1:25473706-25473725 | None:intergenic | 55.0% | |
| CATTCTGTGTCTGCCAGGTC+TGG | - | chr1.1:25477252-25477271 | MS.gene56095:intron | 55.0% | |
| CCGGAAGGGATGCATATTGG+AGG | - | chr1.1:25473715-25473734 | MS.gene56095:intron | 55.0% | |
| CTCAAGAGCAGCCTGCTTAG+TGG | - | chr1.1:25476520-25476539 | MS.gene56095:intron | 55.0% | |
| CTCATTCCTCGTCGAGACCA+TGG | - | chr1.1:25476118-25476137 | MS.gene56095:intron | 55.0% | |
| GCTAGAGCACGGTAGTGTAG+TGG | - | chr1.1:25473920-25473939 | MS.gene56095:intron | 55.0% | |
| TGTGTCTGCCAGGTCTGGAA+AGG | - | chr1.1:25477257-25477276 | MS.gene56095:intron | 55.0% | |
| TTACCAGACACGTTACGGCG+AGG | + | chr1.1:25474387-25474406 | None:intergenic | 55.0% | |
| TTTCCTCGCCGTAACGTGTC+TGG | - | chr1.1:25474381-25474400 | MS.gene56095:intron | 55.0% | |
| ! | ATCCTTGGCCTTTCCAGACC+TGG | + | chr1.1:25477268-25477287 | None:intergenic | 55.0% |
| AAAGCTTCCGGGTGGCCAAG+TGG | - | chr1.1:25475158-25475177 | MS.gene56095:intron | 60.0% | |
| CAGTCTCCATGGTCTCGACG+AGG | + | chr1.1:25476127-25476146 | None:intergenic | 60.0% | |
| CGATCGAAACGTGCCCCAAG+TGG | + | chr1.1:25472030-25472049 | None:intergenic | 60.0% | |
| GGTGTACACGGGATACGCTC+CGG | + | chr1.1:25472989-25473008 | None:intergenic | 60.0% | |
| GTGTACACGGGATACGCTCC+GGG | + | chr1.1:25472988-25473007 | None:intergenic | 60.0% | |
| TGCCAGGTCTGGAAAGGCCA+AGG | - | chr1.1:25477263-25477282 | MS.gene56095:intron | 60.0% | |
| TTTGCCACCACTTGGCCACC+CGG | + | chr1.1:25475168-25475187 | None:intergenic | 60.0% | |
| GCTTCCGGGTGGCCAAGTGG+TGG | - | chr1.1:25475161-25475180 | MS.gene56095:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 25471415 | 25477599 | 25471415 | ID=MS.gene56095 |
| chr1.1 | mRNA | 25471415 | 25477599 | 25471415 | ID=MS.gene56095.t1;Parent=MS.gene56095 |
| chr1.1 | exon | 25477454 | 25477599 | 25477454 | ID=MS.gene56095.t1.exon1;Parent=MS.gene56095.t1 |
| chr1.1 | CDS | 25477454 | 25477599 | 25477454 | ID=cds.MS.gene56095.t1;Parent=MS.gene56095.t1 |
| chr1.1 | exon | 25475398 | 25475491 | 25475398 | ID=MS.gene56095.t1.exon2;Parent=MS.gene56095.t1 |
| chr1.1 | CDS | 25475398 | 25475491 | 25475398 | ID=cds.MS.gene56095.t1;Parent=MS.gene56095.t1 |
| chr1.1 | exon | 25475257 | 25475307 | 25475257 | ID=MS.gene56095.t1.exon3;Parent=MS.gene56095.t1 |
| chr1.1 | CDS | 25475257 | 25475307 | 25475257 | ID=cds.MS.gene56095.t1;Parent=MS.gene56095.t1 |
| chr1.1 | exon | 25474772 | 25474945 | 25474772 | ID=MS.gene56095.t1.exon4;Parent=MS.gene56095.t1 |
| chr1.1 | CDS | 25474772 | 25474945 | 25474772 | ID=cds.MS.gene56095.t1;Parent=MS.gene56095.t1 |
| chr1.1 | exon | 25472758 | 25472937 | 25472758 | ID=MS.gene56095.t1.exon5;Parent=MS.gene56095.t1 |
| chr1.1 | CDS | 25472758 | 25472937 | 25472758 | ID=cds.MS.gene56095.t1;Parent=MS.gene56095.t1 |
| chr1.1 | exon | 25472443 | 25472562 | 25472443 | ID=MS.gene56095.t1.exon6;Parent=MS.gene56095.t1 |
| chr1.1 | CDS | 25472443 | 25472562 | 25472443 | ID=cds.MS.gene56095.t1;Parent=MS.gene56095.t1 |
| chr1.1 | exon | 25471612 | 25471745 | 25471612 | ID=MS.gene56095.t1.exon7;Parent=MS.gene56095.t1 |
| chr1.1 | CDS | 25471612 | 25471745 | 25471612 | ID=cds.MS.gene56095.t1;Parent=MS.gene56095.t1 |
| chr1.1 | exon | 25471415 | 25471490 | 25471415 | ID=MS.gene56095.t1.exon8;Parent=MS.gene56095.t1 |
| chr1.1 | CDS | 25471415 | 25471490 | 25471415 | ID=cds.MS.gene56095.t1;Parent=MS.gene56095.t1 |
| Gene Sequence |
| Protein sequence |
