Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35520.t1 | XP_003596914.2 | 98.8 | 326 | 4 | 0 | 1 | 326 | 1 | 326 | 1.20E-187 | 665.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35520.t1 | Q38884 | 71.0 | 328 | 93 | 1 | 1 | 326 | 1 | 328 | 2.9e-134 | 479.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35520.t1 | G7IRG3 | 98.8 | 326 | 4 | 0 | 1 | 326 | 1 | 326 | 8.4e-188 | 665.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56095 | MS.gene35520 | PPI |
| MS.gene35520 | MS.gene053338 | PPI |
| MS.gene35520 | MS.gene034375 | PPI |
| MS.gene35520 | MS.gene05958 | PPI |
| MS.gene35520 | MS.gene059288 | PPI |
| MS.gene65922 | MS.gene35520 | PPI |
| MS.gene05880 | MS.gene35520 | PPI |
| MS.gene048383 | MS.gene35520 | PPI |
| MS.gene35520 | MS.gene063250 | PPI |
| MS.gene015787 | MS.gene35520 | PPI |
| MS.gene35520 | MS.gene049084 | PPI |
| MS.gene008950 | MS.gene35520 | PPI |
| MS.gene034375 | MS.gene35520 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35520.t1 | MTR_2g087640 | 98.773 | 326 | 4 | 0 | 1 | 326 | 1 | 326 | 0.0 | 667 |
| MS.gene35520.t1 | MTR_2g054920 | 29.907 | 321 | 193 | 8 | 3 | 319 | 9 | 301 | 5.91e-38 | 138 |
| MS.gene35520.t1 | MTR_8g092620 | 22.397 | 317 | 206 | 9 | 5 | 314 | 13 | 296 | 5.37e-16 | 77.4 |
| MS.gene35520.t1 | MTR_8g092620 | 22.468 | 316 | 205 | 9 | 5 | 313 | 20 | 302 | 9.88e-16 | 77.0 |
| MS.gene35520.t1 | MTR_4g095058 | 25.092 | 271 | 135 | 7 | 11 | 229 | 290 | 544 | 1.17e-15 | 78.2 |
| MS.gene35520.t1 | MTR_4g095058 | 25.092 | 271 | 135 | 7 | 11 | 229 | 288 | 542 | 1.22e-15 | 77.8 |
| MS.gene35520.t1 | MTR_7g081695 | 29.121 | 182 | 120 | 5 | 141 | 319 | 554 | 729 | 1.46e-15 | 77.8 |
| MS.gene35520.t1 | MTR_1g072140 | 24.000 | 225 | 156 | 4 | 6 | 227 | 65 | 277 | 2.96e-15 | 75.5 |
| MS.gene35520.t1 | MTR_4g119620 | 25.676 | 222 | 154 | 3 | 7 | 227 | 75 | 286 | 3.06e-15 | 75.9 |
| MS.gene35520.t1 | MTR_4g119620 | 22.188 | 320 | 172 | 8 | 6 | 314 | 23 | 276 | 1.05e-11 | 65.1 |
| MS.gene35520.t1 | MTR_5g016350 | 26.087 | 276 | 134 | 8 | 7 | 229 | 291 | 549 | 1.11e-14 | 75.1 |
| MS.gene35520.t1 | MTR_5g016350 | 26.087 | 276 | 134 | 8 | 7 | 229 | 227 | 485 | 1.98e-14 | 74.3 |
| MS.gene35520.t1 | MTR_8g092620 | 24.783 | 230 | 148 | 7 | 5 | 229 | 13 | 222 | 2.25e-13 | 68.9 |
| MS.gene35520.t1 | MTR_6g005050 | 93.548 | 31 | 2 | 0 | 64 | 94 | 55 | 85 | 4.96e-13 | 65.9 |
| MS.gene35520.t1 | MTR_2g012630 | 22.697 | 304 | 148 | 7 | 38 | 310 | 1 | 248 | 9.29e-12 | 66.6 |
| MS.gene35520.t1 | MTR_7g086360 | 26.425 | 193 | 124 | 3 | 118 | 309 | 70 | 245 | 9.55e-12 | 65.5 |
| MS.gene35520.t1 | MTR_2g012630 | 22.697 | 304 | 148 | 7 | 38 | 310 | 1 | 248 | 1.05e-11 | 66.2 |
| MS.gene35520.t1 | MTR_2g034500 | 25.424 | 236 | 142 | 6 | 49 | 262 | 238 | 461 | 1.34e-11 | 66.2 |
| MS.gene35520.t1 | MTR_5g022690 | 30.542 | 203 | 126 | 7 | 58 | 251 | 186 | 382 | 5.58e-11 | 63.5 |
| MS.gene35520.t1 | MTR_8g028700 | 25.105 | 239 | 158 | 7 | 37 | 272 | 215 | 435 | 9.09e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35520.t1 | AT2G46290 | 79.878 | 328 | 64 | 1 | 1 | 326 | 28 | 355 | 0.0 | 558 |
| MS.gene35520.t1 | AT2G46280 | 80.793 | 328 | 61 | 1 | 1 | 326 | 1 | 328 | 0.0 | 546 |
| MS.gene35520.t1 | AT2G46280 | 80.793 | 328 | 61 | 1 | 1 | 326 | 1 | 328 | 0.0 | 546 |
| MS.gene35520.t1 | AT2G46280 | 75.200 | 250 | 60 | 1 | 1 | 248 | 1 | 250 | 1.37e-136 | 388 |
| MS.gene35520.t1 | AT1G15470 | 30.696 | 316 | 187 | 8 | 3 | 314 | 4 | 291 | 5.35e-40 | 143 |
| MS.gene35520.t1 | AT3G15610 | 29.907 | 321 | 193 | 8 | 3 | 319 | 9 | 301 | 1.12e-35 | 132 |
| MS.gene35520.t1 | AT1G52730 | 30.530 | 321 | 191 | 8 | 3 | 319 | 9 | 301 | 1.43e-35 | 132 |
| MS.gene35520.t1 | AT1G52730 | 30.530 | 321 | 191 | 8 | 3 | 319 | 9 | 301 | 1.43e-35 | 132 |
| MS.gene35520.t1 | AT1G15470 | 28.881 | 277 | 177 | 7 | 3 | 275 | 4 | 264 | 4.34e-28 | 110 |
| MS.gene35520.t1 | AT1G52730 | 28.873 | 284 | 170 | 8 | 3 | 282 | 9 | 264 | 2.14e-23 | 97.4 |
| MS.gene35520.t1 | AT5G67320 | 28.352 | 261 | 141 | 7 | 11 | 230 | 325 | 580 | 2.30e-17 | 83.2 |
| MS.gene35520.t1 | AT3G49660 | 24.434 | 221 | 156 | 3 | 8 | 227 | 69 | 279 | 3.94e-15 | 75.5 |
| MS.gene35520.t1 | AT3G49660 | 24.367 | 316 | 166 | 9 | 6 | 314 | 20 | 269 | 5.84e-13 | 68.9 |
| MS.gene35520.t1 | AT5G64730 | 22.293 | 314 | 210 | 9 | 5 | 314 | 13 | 296 | 1.11e-13 | 70.9 |
| MS.gene35520.t1 | AT1G11160 | 23.158 | 285 | 187 | 9 | 38 | 319 | 1 | 256 | 1.55e-13 | 72.0 |
| MS.gene35520.t1 | AT1G11160 | 23.158 | 285 | 187 | 9 | 38 | 319 | 1 | 256 | 1.64e-13 | 72.0 |
| MS.gene35520.t1 | AT1G11160 | 23.158 | 285 | 187 | 9 | 38 | 319 | 1 | 256 | 1.81e-13 | 71.6 |
| MS.gene35520.t1 | AT4G02730 | 24.116 | 311 | 169 | 8 | 6 | 314 | 39 | 284 | 2.00e-13 | 70.5 |
| MS.gene35520.t1 | AT4G02730 | 25.778 | 225 | 151 | 5 | 7 | 227 | 82 | 294 | 1.04e-11 | 65.5 |
| MS.gene35520.t1 | AT5G25150 | 25.000 | 188 | 125 | 4 | 41 | 226 | 406 | 579 | 6.23e-12 | 67.0 |
| MS.gene35520.t1 | AT5G25150 | 25.000 | 188 | 125 | 4 | 41 | 226 | 406 | 579 | 7.03e-12 | 66.6 |
| MS.gene35520.t1 | AT1G15440 | 24.017 | 229 | 155 | 5 | 7 | 232 | 386 | 598 | 1.70e-11 | 65.9 |
| MS.gene35520.t1 | AT1G15440 | 24.017 | 229 | 155 | 5 | 7 | 232 | 346 | 558 | 1.94e-11 | 65.5 |
| MS.gene35520.t1 | AT2G43770 | 25.946 | 185 | 119 | 3 | 136 | 319 | 86 | 253 | 2.00e-11 | 64.7 |
| MS.gene35520.t1 | AT2G43770 | 21.981 | 323 | 168 | 8 | 4 | 314 | 90 | 340 | 5.30e-11 | 63.2 |
| MS.gene35520.t1 | AT2G47410 | 24.779 | 226 | 144 | 7 | 15 | 225 | 199 | 413 | 2.99e-11 | 65.1 |
| MS.gene35520.t1 | AT2G47410 | 24.779 | 226 | 144 | 7 | 15 | 225 | 200 | 414 | 3.05e-11 | 65.1 |
| MS.gene35520.t1 | AT2G47410 | 24.779 | 226 | 144 | 7 | 15 | 225 | 18 | 232 | 3.48e-11 | 64.7 |
Find 77 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCACTACCGATCCGTTTA+TGG | 0.167131 | 2.4:+13239984 | MS.gene35520:CDS |
| GGAATCTTTGCTTGTAATTA+AGG | 0.177487 | 2.4:+13240170 | MS.gene35520:CDS |
| AAGATGCTGTCATTCGTATT+TGG | 0.183590 | 2.4:+13240259 | MS.gene35520:CDS |
| TAGATTCTTCAAGAAGAAAT+TGG | 0.198485 | 2.4:+13242396 | MS.gene35520:intron |
| TCATGGCCTTTCATCAAAAT+TGG | 0.284401 | 2.4:-13239664 | None:intergenic |
| CCTTCAACCCTGATGGAAAA+AGG | 0.307173 | 2.4:+13242457 | MS.gene35520:CDS |
| GCCGAGACGTTCGCCGTTAT+CGG | 0.310111 | 2.4:-13239773 | None:intergenic |
| CTTACGGTCAGCAGGATCTT+TGG | 0.310970 | 2.4:-13240040 | None:intergenic |
| AAGAATCAATAGAGCCATTT+GGG | 0.314384 | 2.4:+13240203 | MS.gene35520:CDS |
| AGATGCTGTCATTCGTATTT+GGG | 0.316154 | 2.4:+13240260 | MS.gene35520:CDS |
| GATTCCGGTCGGCTTATTAC+TGG | 0.335072 | 2.4:+13239844 | MS.gene35520:CDS |
| TGCGATGTTTCCCGTGATTC+CGG | 0.356785 | 2.4:+13239829 | MS.gene35520:CDS |
| AGATTCTTCAAGAAGAAATT+GGG | 0.362725 | 2.4:+13242397 | MS.gene35520:intron |
| TTGTACTTGAGATATGTTAA+TGG | 0.369742 | 2.4:-13239691 | None:intergenic |
| ATGTGAACCATCAGCAGATT+TGG | 0.370730 | 2.4:-13241565 | None:intergenic |
| ATCTTCTCCGGCACTGATAA+TGG | 0.375503 | 2.4:-13240241 | None:intergenic |
| GAAGAATCAATAGAGCCATT+TGG | 0.398192 | 2.4:+13240202 | MS.gene35520:CDS |
| AAAGGAGTCAGACAAGGAAT+TGG | 0.401919 | 2.4:+13241515 | MS.gene35520:CDS |
| GGTGGTACTTGGAGGTGGTC+AGG | 0.402861 | 2.4:+13242223 | MS.gene35520:intron |
| GAATCTTTGCTTGTAATTAA+GGG | 0.404785 | 2.4:+13240171 | MS.gene35520:CDS |
| TGAAGCCAAGTTCTTTGATA+AGG | 0.422484 | 2.4:+13242289 | MS.gene35520:CDS |
| ACCGTTTGGTTTGCCGATAA+CGG | 0.426503 | 2.4:+13239760 | MS.gene35520:CDS |
| GCTTGTAATTAAGGGACCTC+AGG | 0.429732 | 2.4:+13240179 | MS.gene35520:CDS |
| AGGTCTGTTGATTTCTCTGT+TGG | 0.442427 | 2.4:+13239946 | MS.gene35520:CDS |
| TCCGTTTATGGAACTTTCCT+CGG | 0.446652 | 2.4:+13239996 | MS.gene35520:CDS |
| AAGACCACAATCCCACCGTT+TGG | 0.453346 | 2.4:+13239746 | MS.gene35520:CDS |
| TTTCATCAAAATTGGTCTCA+TGG | 0.462982 | 2.4:-13239656 | None:intergenic |
| TTGTAGGTGGTACTTGGAGG+TGG | 0.468354 | 2.4:+13242218 | MS.gene35520:intron |
| GATGGTTCACATTTCTGCAC+TGG | 0.474156 | 2.4:+13241576 | MS.gene35520:CDS |
| ATCTACCTTATCAAAGAACT+TGG | 0.474993 | 2.4:-13242294 | None:intergenic |
| ATACCTTAGCAGACTTATCA+AGG | 0.481607 | 2.4:-13241602 | None:intergenic |
| CTTGTTGAGTGGTCCCCAAA+TGG | 0.483713 | 2.4:-13240217 | None:intergenic |
| GCCGAGGAAAGTTCCATAAA+CGG | 0.483770 | 2.4:-13239997 | None:intergenic |
| TAATAAGCCGACCGGAATCA+CGG | 0.489640 | 2.4:-13239840 | None:intergenic |
| TTGAAGGCCAGTGCATTAAT+CGG | 0.490242 | 2.4:-13242441 | None:intergenic |
| AAGGAGTCAGACAAGGAATT+GGG | 0.492097 | 2.4:+13241516 | MS.gene35520:CDS |
| CATTCGTATTTGGGATTCTG+AGG | 0.498646 | 2.4:+13240269 | MS.gene35520:CDS |
| GCTTGATACTTACGGTCAGC+AGG | 0.502074 | 2.4:-13240048 | None:intergenic |
| AATAAGCCGACCGGAATCAC+GGG | 0.509411 | 2.4:-13239839 | None:intergenic |
| GTGGTCATAACGGTGCTGTT+TGG | 0.512777 | 2.4:+13239803 | MS.gene35520:CDS |
| TATCTCAAGTACAACCTTGA+CGG | 0.514822 | 2.4:+13239700 | MS.gene35520:CDS |
| GACATTGTAACCGCATTGAC+AGG | 0.525795 | 2.4:-13241776 | None:intergenic |
| GCCGTTATCGGCAAACCAAA+CGG | 0.530175 | 2.4:-13239761 | None:intergenic |
| CAAACCAAACGGTGGGATTG+TGG | 0.533960 | 2.4:-13239750 | None:intergenic |
| CTCCCTTGATAAGTCTGCTA+AGG | 0.544218 | 2.4:+13241599 | MS.gene35520:CDS |
| ACGAATGACAGCATCTTCTC+CGG | 0.544600 | 2.4:-13240253 | None:intergenic |
| AACAAGACCATTATCAGTGC+CGG | 0.550720 | 2.4:+13240234 | MS.gene35520:CDS |
| GCCGATAACGGCGAACGTCT+CGG | 0.554759 | 2.4:+13239772 | MS.gene35520:CDS |
| GCAGACTGGAAAACTACTAA+AGG | 0.564946 | 2.4:+13241497 | MS.gene35520:intron |
| GCACTGGCCTTCAACCCTGA+TGG | 0.568197 | 2.4:+13242450 | MS.gene35520:CDS |
| GAGAAATCAACAGACCTAGC+AGG | 0.569543 | 2.4:-13239940 | None:intergenic |
| CTGATAATGGTCTTGTTGAG+TGG | 0.574047 | 2.4:-13240228 | None:intergenic |
| ACAACAACTGATCATCGTGC+TGG | 0.575921 | 2.4:+13242260 | MS.gene35520:CDS |
| CTTGTAATTAAGGGACCTCA+GGG | 0.577207 | 2.4:+13240180 | MS.gene35520:CDS |
| GGCACTTACCGTGGTCATAA+CGG | 0.585784 | 2.4:+13239793 | MS.gene35520:CDS |
| GATTCTTCAAGAAGAAATTG+GGG | 0.586348 | 2.4:+13242398 | MS.gene35520:intron |
| ATGTTTCCCGTGATTCCGGT+CGG | 0.587403 | 2.4:+13239833 | MS.gene35520:CDS |
| GAACGTCTCGGCACTTACCG+TGG | 0.591202 | 2.4:+13239784 | MS.gene35520:CDS |
| TCACTCGCCAAATCTGCTGA+TGG | 0.591285 | 2.4:+13241558 | MS.gene35520:CDS |
| GATATGTTAATGGCCTCTCA+TGG | 0.594160 | 2.4:-13239681 | None:intergenic |
| AGAAAAGAAGATCGCCGTCA+AGG | 0.603229 | 2.4:-13239714 | None:intergenic |
| GTTTATTTGTTCAGAAACTG+CGG | 0.606772 | 2.4:+13240149 | MS.gene35520:intron |
| ATACATACATGATCAAGAAG+AGG | 0.609443 | 2.4:-13241800 | None:intergenic |
| ACTGCCAGTAATAAGCCGAC+CGG | 0.620174 | 2.4:-13239848 | None:intergenic |
| AAGTTGTGGAATGTGCAGAC+TGG | 0.635011 | 2.4:+13239886 | MS.gene35520:CDS |
| CTGATCAGACTGTTAAGTTG+TGG | 0.637649 | 2.4:+13239872 | MS.gene35520:CDS |
| GGAAAGTTCCATAAACGGAT+CGG | 0.642534 | 2.4:-13239992 | None:intergenic |
| TTATCGGCAAACCAAACGGT+GGG | 0.644025 | 2.4:-13239757 | None:intergenic |
| TACCTTAGCAGACTTATCAA+GGG | 0.653883 | 2.4:-13241601 | None:intergenic |
| AAACAGCACCGTTATGACCA+CGG | 0.665988 | 2.4:-13239801 | None:intergenic |
| ACTACTAAAGGAGTCAGACA+AGG | 0.669645 | 2.4:+13241509 | MS.gene35520:CDS |
| GCTCTATTGATTCTTCCCTG+AGG | 0.677890 | 2.4:-13240195 | None:intergenic |
| ATTCTTCAAGAAGAAATTGG+GGG | 0.687458 | 2.4:+13242399 | MS.gene35520:CDS |
| GTTATCGGCAAACCAAACGG+TGG | 0.689108 | 2.4:-13239758 | None:intergenic |
| GACAGAACGTCCTGTCAATG+CGG | 0.693622 | 2.4:+13241766 | MS.gene35520:CDS |
| GCGTTTAACATGAATCGCCG+AGG | 0.701031 | 2.4:-13240013 | None:intergenic |
| AGAATCAATAGAGCCATTTG+GGG | 0.717983 | 2.4:+13240204 | MS.gene35520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAATAGTTAAAAAAAG+TGG | - | chr2.4:13240450-13240469 | None:intergenic | 10.0% |
| !!! | ATTTTGATATTGAAATAATC+TGG | - | chr2.4:13243425-13243444 | None:intergenic | 15.0% |
| !!! | TTTTCAATTTTTAGTTACTT+GGG | + | chr2.4:13242139-13242158 | MS.gene35520:intron | 15.0% |
| !!! | TTTTGATATTGAAATAATCT+GGG | - | chr2.4:13243424-13243443 | None:intergenic | 15.0% |
| !! | AATTACTAATTATCATGGAA+AGG | + | chr2.4:13243129-13243148 | MS.gene35520:intron | 20.0% |
| !! | AATTAGTAATTACACAATAC+AGG | - | chr2.4:13243120-13243139 | None:intergenic | 20.0% |
| !! | ACAAATAAACAAACAAACAT+TGG | - | chr2.4:13240139-13240158 | None:intergenic | 20.0% |
| !! | ACTATTTAATTATACATGAG+TGG | + | chr2.4:13240459-13240478 | MS.gene35520:intron | 20.0% |
| !! | ATCAAATTTGAAGGTTAAAT+AGG | - | chr2.4:13243033-13243052 | None:intergenic | 20.0% |
| !! | CAATATAAAGAAGAAAAACT+GGG | - | chr2.4:13242785-13242804 | None:intergenic | 20.0% |
| !! | GAAGAATCTAAACAAATAAA+TGG | - | chr2.4:13242386-13242405 | None:intergenic | 20.0% |
| !! | GATTTGAAGATTAAAAACAA+AGG | - | chr2.4:13242488-13242507 | None:intergenic | 20.0% |
| !! | GTTAATATTGCAAAAAAGAA+CGG | - | chr2.4:13241702-13241721 | None:intergenic | 20.0% |
| !! | TATAAATTCTGCATAGTAAA+AGG | - | chr2.4:13242602-13242621 | None:intergenic | 20.0% |
| !! | TATTTAACCTTCAAATTTGA+TGG | + | chr2.4:13243032-13243051 | MS.gene35520:intron | 20.0% |
| !! | TCAAATTTGAAGGTTAAATA+GGG | - | chr2.4:13243032-13243051 | None:intergenic | 20.0% |
| !! | TGTGTAATTACTAATTATCA+TGG | + | chr2.4:13243124-13243143 | MS.gene35520:intron | 20.0% |
| !! | TTGCAATATTAACTAGATTT+GGG | + | chr2.4:13241709-13241728 | MS.gene35520:intron | 20.0% |
| !! | TTTGCAATATTAACTAGATT+TGG | + | chr2.4:13241708-13241727 | MS.gene35520:intron | 20.0% |
| !!! | ATAGCATATTTTTTTACTGT+TGG | + | chr2.4:13242523-13242542 | MS.gene35520:intron | 20.0% |
| !!! | GTTTTCAATTTTTAGTTACT+TGG | + | chr2.4:13242138-13242157 | MS.gene35520:intron | 20.0% |
| !!! | TTATTTTGTAGTTTTTCAAG+TGG | + | chr2.4:13243362-13243381 | MS.gene35520:intron | 20.0% |
| !!! | TTGACGAAATTTTACATTTA+GGG | + | chr2.4:13240364-13240383 | MS.gene35520:intron | 20.0% |
| !!! | TTTGACGAAATTTTACATTT+AGG | + | chr2.4:13240363-13240382 | MS.gene35520:intron | 20.0% |
| ! | AAACCTTGAAATATTTCCTA+AGG | + | chr2.4:13242904-13242923 | MS.gene35520:intron | 25.0% |
| ! | AACGAAAACAACTGTAAATT+GGG | + | chr2.4:13240518-13240537 | MS.gene35520:intron | 25.0% |
| ! | AATTATACATGAGTGGAATT+AGG | + | chr2.4:13240466-13240485 | MS.gene35520:intron | 25.0% |
| ! | ACTTGTATGATTGTCTAATA+GGG | + | chr2.4:13242709-13242728 | MS.gene35520:intron | 25.0% |
| ! | AGATTCTTCAAGAAGAAATT+GGG | + | chr2.4:13242397-13242416 | MS.gene35520:intron | 25.0% |
| ! | AGCACATATATTAGAAAAGA+TGG | + | chr2.4:13240791-13240810 | MS.gene35520:intron | 25.0% |
| ! | AGGAGAGATTGATTAATAAT+TGG | + | chr2.4:13242931-13242950 | MS.gene35520:intron | 25.0% |
| ! | ATAATGCCTCATAAATCAAA+TGG | - | chr2.4:13243271-13243290 | None:intergenic | 25.0% |
| ! | CAAACAATTATGCGAATTAA+TGG | - | chr2.4:13242660-13242679 | None:intergenic | 25.0% |
| ! | GAAATATTTCCTAAGGATAT+AGG | + | chr2.4:13242911-13242930 | MS.gene35520:intron | 25.0% |
| ! | GAATCTTTGCTTGTAATTAA+GGG | + | chr2.4:13240171-13240190 | MS.gene35520:CDS | 25.0% |
| ! | GACATTTAGATTCTGTATTA+AGG | + | chr2.4:13240852-13240871 | MS.gene35520:intron | 25.0% |
| ! | GCAATATAAAGAAGAAAAAC+TGG | - | chr2.4:13242786-13242805 | None:intergenic | 25.0% |
| ! | GGAAGACATTAGTTAATTAA+AGG | - | chr2.4:13241912-13241931 | None:intergenic | 25.0% |
| ! | GTAAAAGGTTAACATAATCA+TGG | - | chr2.4:13242587-13242606 | None:intergenic | 25.0% |
| ! | GTGAGAAATATAGCAAAAAA+AGG | - | chr2.4:13241237-13241256 | None:intergenic | 25.0% |
| ! | TAAACAGATTGTAGATTGTT+TGG | + | chr2.4:13242750-13242769 | MS.gene35520:intron | 25.0% |
| ! | TAAGTGCTCATAAAAATTTG+TGG | + | chr2.4:13240697-13240716 | MS.gene35520:intron | 25.0% |
| ! | TACAAAAAAAACATAGGGTA+AGG | - | chr2.4:13242203-13242222 | None:intergenic | 25.0% |
| ! | TACTTGTATGATTGTCTAAT+AGG | + | chr2.4:13242708-13242727 | MS.gene35520:intron | 25.0% |
| ! | TAGATTCTTCAAGAAGAAAT+TGG | + | chr2.4:13242396-13242415 | MS.gene35520:intron | 25.0% |
| ! | TATCCTTAGGAAATATTTCA+AGG | - | chr2.4:13242910-13242929 | None:intergenic | 25.0% |
| ! | TCATACAAGTAAATAGCATA+AGG | - | chr2.4:13242699-13242718 | None:intergenic | 25.0% |
| ! | TTAATAATTGGAATATAGCC+TGG | + | chr2.4:13242943-13242962 | MS.gene35520:intron | 25.0% |
| ! | TTATTGCAAAACTATTAGCA+AGG | - | chr2.4:13242101-13242120 | None:intergenic | 25.0% |
| ! | TTCATCAAATTCAATCTATG+TGG | + | chr2.4:13241120-13241139 | MS.gene35520:intron | 25.0% |
| ! | TTGTACTTGAGATATGTTAA+TGG | - | chr2.4:13239694-13239713 | None:intergenic | 25.0% |
| ! | TTTAGCAGTTAATCATAAAC+AGG | + | chr2.4:13242972-13242991 | MS.gene35520:intron | 25.0% |
| !! | ATATGATTTTTCCGTAGTTT+TGG | + | chr2.4:13242847-13242866 | MS.gene35520:intron | 25.0% |
| !! | TATGATTTTTCCGTAGTTTT+GGG | + | chr2.4:13242848-13242867 | MS.gene35520:intron | 25.0% |
| !! | TGTTAGTTTAGACTTTGTTT+GGG | - | chr2.4:13241285-13241304 | None:intergenic | 25.0% |
| !! | TTGTTAGTTTAGACTTTGTT+TGG | - | chr2.4:13241286-13241305 | None:intergenic | 25.0% |
| !!! | TGTTGGTAATCTTCAATTTA+CGG | + | chr2.4:13242540-13242559 | MS.gene35520:intron | 25.0% |
| !!! | TTACCCTATGTTTTTTTTGT+AGG | + | chr2.4:13242202-13242221 | MS.gene35520:intron | 25.0% |
| AAAGGATCCATCAAATTTGA+AGG | - | chr2.4:13243042-13243061 | None:intergenic | 30.0% | |
| AAGAAGGATTTAGAGATTAC+TGG | + | chr2.4:13241304-13241323 | MS.gene35520:intron | 30.0% | |
| AAGAATCAATAGAGCCATTT+GGG | + | chr2.4:13240203-13240222 | MS.gene35520:CDS | 30.0% | |
| AATACGAAATACCCCTAATT+TGG | + | chr2.4:13241001-13241020 | MS.gene35520:intron | 30.0% | |
| AATATGAAATCCCCCTAATT+TGG | + | chr2.4:13241050-13241069 | MS.gene35520:intron | 30.0% | |
| AATGGAGTAATTGTAGTAGA+TGG | - | chr2.4:13241459-13241478 | None:intergenic | 30.0% | |
| ACCACCTACAAAAAAAACAT+AGG | - | chr2.4:13242209-13242228 | None:intergenic | 30.0% | |
| ACGAAAACAACTGTAAATTG+GGG | + | chr2.4:13240519-13240538 | MS.gene35520:intron | 30.0% | |
| ACTGCTTAGCATAAGTTTAA+AGG | - | chr2.4:13243060-13243079 | None:intergenic | 30.0% | |
| AGAAGGATTTAGAGATTACT+GGG | + | chr2.4:13241305-13241324 | MS.gene35520:intron | 30.0% | |
| AGCATCTATTGTAGAAAAGA+TGG | + | chr2.4:13240400-13240419 | MS.gene35520:intron | 30.0% | |
| ATACATACATGATCAAGAAG+AGG | - | chr2.4:13241803-13241822 | None:intergenic | 30.0% | |
| ATACGAAATACCCCTAATTT+GGG | + | chr2.4:13241002-13241021 | MS.gene35520:intron | 30.0% | |
| ATATGAAATCCCCCTAATTT+GGG | + | chr2.4:13241051-13241070 | MS.gene35520:intron | 30.0% | |
| ATCTACCTTATCAAAGAACT+TGG | - | chr2.4:13242297-13242316 | None:intergenic | 30.0% | |
| ATCTTCGATTACCAAAATGT+TGG | - | chr2.4:13243167-13243186 | None:intergenic | 30.0% | |
| ATTCTTCAAGAAGAAATTGG+GGG | + | chr2.4:13242399-13242418 | MS.gene35520:CDS | 30.0% | |
| CAAAGTCTAAACTAACAAGA+AGG | + | chr2.4:13241288-13241307 | MS.gene35520:intron | 30.0% | |
| CAAGCTTCCTTCAAAAAAAT+AGG | - | chr2.4:13241954-13241973 | None:intergenic | 30.0% | |
| CAGAAAAAGCTTGATACTTA+CGG | - | chr2.4:13240059-13240078 | None:intergenic | 30.0% | |
| CCACCTACAAAAAAAACATA+GGG | - | chr2.4:13242208-13242227 | None:intergenic | 30.0% | |
| CTTGAAAAAATGTGAATCGA+TGG | - | chr2.4:13242629-13242648 | None:intergenic | 30.0% | |
| GAAATATTTCAAGGTTTCCA+TGG | - | chr2.4:13242901-13242920 | None:intergenic | 30.0% | |
| GAACGAAAACAACTGTAAAT+TGG | + | chr2.4:13240517-13240536 | MS.gene35520:intron | 30.0% | |
| GATTCTTCAAGAAGAAATTG+GGG | + | chr2.4:13242398-13242417 | MS.gene35520:intron | 30.0% | |
| GGAATCTTTGCTTGTAATTA+AGG | + | chr2.4:13240170-13240189 | MS.gene35520:CDS | 30.0% | |
| GTTGTTGCAAACTAATACTA+TGG | + | chr2.4:13243241-13243260 | MS.gene35520:intron | 30.0% | |
| GTTTATTTGTTCAGAAACTG+CGG | + | chr2.4:13240149-13240168 | MS.gene35520:intron | 30.0% | |
| TACTTGTGGTAAGAAAATGT+GGG | - | chr2.4:13240606-13240625 | None:intergenic | 30.0% | |
| TTAACTGCTAAATTAGAACC+AGG | - | chr2.4:13242964-13242983 | None:intergenic | 30.0% | |
| TTTGAAAAGAAACAACAGCA+AGG | - | chr2.4:13242827-13242846 | None:intergenic | 30.0% | |
| ! | ATGCAAACTTCTGAAAGAAA+GGG | - | chr2.4:13242004-13242023 | None:intergenic | 30.0% |
| ! | ATTTTCTTACCACAAGTACA+AGG | + | chr2.4:13240608-13240627 | MS.gene35520:intron | 30.0% |
| ! | CAAAGCCTTATAGTTATTCT+AGG | - | chr2.4:13240933-13240952 | None:intergenic | 30.0% |
| ! | GTGATGTTATTGTCTTTTTG+TGG | - | chr2.4:13241542-13241561 | None:intergenic | 30.0% |
| ! | GTGTGAATATTCCAACATTT+TGG | + | chr2.4:13243153-13243172 | MS.gene35520:intron | 30.0% |
| ! | TATGCAAACTTCTGAAAGAA+AGG | - | chr2.4:13242005-13242024 | None:intergenic | 30.0% |
| !! | ATGAGACCAATTTTGATGAA+AGG | + | chr2.4:13239658-13239677 | MS.gene35520:CDS | 30.0% |
| !! | ATGATTTTTCCGTAGTTTTG+GGG | + | chr2.4:13242849-13242868 | MS.gene35520:intron | 30.0% |
| !!! | ATGGTGTCCTATTTTTTTGA+AGG | + | chr2.4:13241944-13241963 | MS.gene35520:intron | 30.0% |
| !!! | TTAATTTTGATTCTCCTGCT+AGG | + | chr2.4:13239926-13239945 | MS.gene35520:CDS | 30.0% |
| !!! | TTTTGTAGTTTTTCAAGTGG+AGG | + | chr2.4:13243365-13243384 | MS.gene35520:intron | 30.0% |
| !!! | TTTTTTTTGTAGGTGGTACT+TGG | + | chr2.4:13242212-13242231 | MS.gene35520:intron | 30.0% |
| AAAAAGAACGGAAACTGGTT+AGG | - | chr2.4:13241690-13241709 | None:intergenic | 35.0% | |
| AAAAGAAACAACAGCAAGGA+AGG | - | chr2.4:13242823-13242842 | None:intergenic | 35.0% | |
| AAACTAGACTTAGGTGGTTT+GGG | + | chr2.4:13240817-13240836 | MS.gene35520:intron | 35.0% | |
| AAGATGCTGTCATTCGTATT+TGG | + | chr2.4:13240259-13240278 | MS.gene35520:CDS | 35.0% | |
| AATAAGAAAGAAAGGGGTTG+AGG | - | chr2.4:13242031-13242050 | None:intergenic | 35.0% | |
| AGAATCAATAGAGCCATTTG+GGG | + | chr2.4:13240204-13240223 | MS.gene35520:CDS | 35.0% | |
| AGAGAAAACCATACAATGAC+TGG | - | chr2.4:13242177-13242196 | None:intergenic | 35.0% | |
| AGATGCTGTCATTCGTATTT+GGG | + | chr2.4:13240260-13240279 | MS.gene35520:CDS | 35.0% | |
| AGATGGTAGAAACTAGACTT+AGG | + | chr2.4:13240808-13240827 | MS.gene35520:intron | 35.0% | |
| ATACCTTAGCAGACTTATCA+AGG | - | chr2.4:13241605-13241624 | None:intergenic | 35.0% | |
| ATTAAGGAGAGTAGATCTGA+TGG | + | chr2.4:13240868-13240887 | MS.gene35520:intron | 35.0% | |
| CTGGGAGAATAAGAAAGAAA+GGG | - | chr2.4:13242038-13242057 | None:intergenic | 35.0% | |
| CTTATCCAACTAAGTGGAAT+CGG | - | chr2.4:13241386-13241405 | None:intergenic | 35.0% | |
| GAAAAAATGTGAATCGATGG+TGG | - | chr2.4:13242626-13242645 | None:intergenic | 35.0% | |
| GAAGAATCAATAGAGCCATT+TGG | + | chr2.4:13240202-13240221 | MS.gene35520:CDS | 35.0% | |
| GAGGACCTAGAATAACTATA+AGG | + | chr2.4:13240925-13240944 | MS.gene35520:intron | 35.0% | |
| GGTGAACTGCAATAATTTCA+TGG | - | chr2.4:13241669-13241688 | None:intergenic | 35.0% | |
| GTACTTGTGGTAAGAAAATG+TGG | - | chr2.4:13240607-13240626 | None:intergenic | 35.0% | |
| GTCTTCCTCTTGCATAATAA+TGG | + | chr2.4:13241925-13241944 | MS.gene35520:intron | 35.0% | |
| GTGCTCATAAAAATTTGTGG+TGG | + | chr2.4:13240700-13240719 | MS.gene35520:intron | 35.0% | |
| TAAAGAAGAAAAACTGGGCA+TGG | - | chr2.4:13242780-13242799 | None:intergenic | 35.0% | |
| TACCTTAGCAGACTTATCAA+GGG | - | chr2.4:13241604-13241623 | None:intergenic | 35.0% | |
| TACGGATGAACTGGAAAAAT+GGG | + | chr2.4:13242558-13242577 | MS.gene35520:intron | 35.0% | |
| TATCTCAAGTACAACCTTGA+CGG | + | chr2.4:13239700-13239719 | MS.gene35520:CDS | 35.0% | |
| TATGAAATCCCCCTAATTTG+GGG | + | chr2.4:13241052-13241071 | MS.gene35520:intron | 35.0% | |
| TCAATCTCTCCTATATCCTT+AGG | - | chr2.4:13242923-13242942 | None:intergenic | 35.0% | |
| TCATGGCCTTTCATCAAAAT+TGG | - | chr2.4:13239667-13239686 | None:intergenic | 35.0% | |
| TCGCAACAAAGTAAAATCCA+TGG | + | chr2.4:13242881-13242900 | MS.gene35520:intron | 35.0% | |
| TCTTCAATTTACGGATGAAC+TGG | + | chr2.4:13242549-13242568 | MS.gene35520:intron | 35.0% | |
| TGAAGCCAAGTTCTTTGATA+AGG | + | chr2.4:13242289-13242308 | MS.gene35520:CDS | 35.0% | |
| TGGGAGAATAAGAAAGAAAG+GGG | - | chr2.4:13242037-13242056 | None:intergenic | 35.0% | |
| TTACATTTAGGGATAGAGCT+GGG | + | chr2.4:13240375-13240394 | MS.gene35520:intron | 35.0% | |
| TTACGGATGAACTGGAAAAA+TGG | + | chr2.4:13242557-13242576 | MS.gene35520:intron | 35.0% | |
| TTACTTTGTTGCGAACAAGA+GGG | - | chr2.4:13242875-13242894 | None:intergenic | 35.0% | |
| TTCGTCAAATCTCTATCACA+TGG | - | chr2.4:13240352-13240371 | None:intergenic | 35.0% | |
| TTGCAAAAAAGAACGGAAAC+TGG | - | chr2.4:13241695-13241714 | None:intergenic | 35.0% | |
| TTTACATTTAGGGATAGAGC+TGG | + | chr2.4:13240374-13240393 | MS.gene35520:intron | 35.0% | |
| TTTACTTGTCTGATACCATG+TGG | + | chr2.4:13243003-13243022 | MS.gene35520:intron | 35.0% | |
| TTTACTTTGTTGCGAACAAG+AGG | - | chr2.4:13242876-13242895 | None:intergenic | 35.0% | |
| ! | ATGGAGCTAAACAGTTTTCT+CGG | - | chr2.4:13240573-13240592 | None:intergenic | 35.0% |
| ! | ATTTGGAGTTTCCCCAAATT+AGG | - | chr2.4:13241066-13241085 | None:intergenic | 35.0% |
| ! | GGTTCTCCATTTGATTTATG+AGG | + | chr2.4:13243262-13243281 | MS.gene35520:intron | 35.0% |
| ! | TGCAAACTTCTGAAAGAAAG+GGG | - | chr2.4:13242003-13242022 | None:intergenic | 35.0% |
| ! | TTAGACTTTGTTTGGGAGTT+TGG | - | chr2.4:13241278-13241297 | None:intergenic | 35.0% |
| ! | TTTGGAGTTTCCCCAAATTA+GGG | - | chr2.4:13241065-13241084 | None:intergenic | 35.0% |
| !! | ATACCATTTCAAGTTCTCTC+AGG | + | chr2.4:13242333-13242352 | MS.gene35520:intron | 35.0% |
| !!! | CCCTATGTTTTTTTTGTAGG+TGG | + | chr2.4:13242205-13242224 | MS.gene35520:intron | 35.0% |
| AAACCCTCCTCAAGACAATT+TGG | - | chr2.4:13241083-13241102 | None:intergenic | 40.0% | |
| AAAGGAGTCAGACAAGGAAT+TGG | + | chr2.4:13241515-13241534 | MS.gene35520:CDS | 40.0% | |
| AAATGTGGGCAATAGGAAGA+TGG | - | chr2.4:13240592-13240611 | None:intergenic | 40.0% | |
| AACAAGACCATTATCAGTGC+CGG | + | chr2.4:13240234-13240253 | MS.gene35520:CDS | 40.0% | |
| AACTCCAAATTGTCTTGAGG+AGG | + | chr2.4:13241076-13241095 | MS.gene35520:intron | 40.0% | |
| AACTGTAAATTGGGGATGTC+TGG | + | chr2.4:13240527-13240546 | MS.gene35520:intron | 40.0% | |
| AAGCCAGCAAGAGAATAGAA+TGG | - | chr2.4:13241477-13241496 | None:intergenic | 40.0% | |
| AAGGAGTCAGACAAGGAATT+GGG | + | chr2.4:13241516-13241535 | MS.gene35520:CDS | 40.0% | |
| AATACCCCTAATTTGGGCAT+TGG | + | chr2.4:13241008-13241027 | MS.gene35520:intron | 40.0% | |
| ACACCTGAGAGAACTTGAAA+TGG | - | chr2.4:13242339-13242358 | None:intergenic | 40.0% | |
| ACTACTAAAGGAGTCAGACA+AGG | + | chr2.4:13241509-13241528 | MS.gene35520:CDS | 40.0% | |
| ACTCCAAATTGTCTTGAGGA+GGG | + | chr2.4:13241077-13241096 | MS.gene35520:intron | 40.0% | |
| ACTCCATTCTATTCTCTTGC+TGG | + | chr2.4:13241471-13241490 | MS.gene35520:intron | 40.0% | |
| AGAGATTAGAGAGAGAGTTG+GGG | + | chr2.4:13240767-13240786 | MS.gene35520:intron | 40.0% | |
| ATACCCCTAATTTGGGCATT+GGG | + | chr2.4:13241009-13241028 | MS.gene35520:intron | 40.0% | |
| ATCATGAACTAGTAAGCAGC+TGG | - | chr2.4:13242057-13242076 | None:intergenic | 40.0% | |
| ATGTGAACCATCAGCAGATT+TGG | - | chr2.4:13241568-13241587 | None:intergenic | 40.0% | |
| CAGAATTGCAATTCGTCTAC+TGG | + | chr2.4:13240652-13240671 | MS.gene35520:intron | 40.0% | |
| CCAAAGTAACCTTGTACTTG+TGG | - | chr2.4:13240620-13240639 | None:intergenic | 40.0% | |
| CCACAAGTACAAGGTTACTT+TGG | + | chr2.4:13240617-13240636 | MS.gene35520:intron | 40.0% | |
| CGATTCCACTTAGTTGGATA+AGG | + | chr2.4:13241384-13241403 | MS.gene35520:intron | 40.0% | |
| CTTGTAATTAAGGGACCTCA+GGG | + | chr2.4:13240180-13240199 | MS.gene35520:CDS | 40.0% | |
| GAAACTAGACTTAGGTGGTT+TGG | + | chr2.4:13240816-13240835 | MS.gene35520:intron | 40.0% | |
| GAGAGATTAGAGAGAGAGTT+GGG | + | chr2.4:13240766-13240785 | MS.gene35520:intron | 40.0% | |
| GAGGGTAGTTAAATCACTAG+AGG | + | chr2.4:13240890-13240909 | MS.gene35520:intron | 40.0% | |
| GATATGTTAATGGCCTCTCA+TGG | - | chr2.4:13239684-13239703 | None:intergenic | 40.0% | |
| GCAGACTGGAAAACTACTAA+AGG | + | chr2.4:13241497-13241516 | MS.gene35520:intron | 40.0% | |
| GCTGGGAGAATAAGAAAGAA+AGG | - | chr2.4:13242039-13242058 | None:intergenic | 40.0% | |
| GGAAACTCCAAATTGTCTTG+AGG | + | chr2.4:13241073-13241092 | MS.gene35520:intron | 40.0% | |
| GGAAAGTTCCATAAACGGAT+CGG | - | chr2.4:13239995-13240014 | None:intergenic | 40.0% | |
| GGACACCATTATTATGCAAG+AGG | - | chr2.4:13241933-13241952 | None:intergenic | 40.0% | |
| GGATTTAGAGATTACTGGGT+TGG | + | chr2.4:13241309-13241328 | MS.gene35520:intron | 40.0% | |
| GGTAAGAAAATGTGGGCAAT+AGG | - | chr2.4:13240599-13240618 | None:intergenic | 40.0% | |
| TACATTTAGGGATAGAGCTG+GGG | + | chr2.4:13240376-13240395 | MS.gene35520:intron | 40.0% | |
| TATCACTACCGATCCGTTTA+TGG | + | chr2.4:13239984-13240003 | MS.gene35520:CDS | 40.0% | |
| TCATGAACTAGTAAGCAGCT+GGG | - | chr2.4:13242056-13242075 | None:intergenic | 40.0% | |
| TCCGTTTATGGAACTTTCCT+CGG | + | chr2.4:13239996-13240015 | MS.gene35520:CDS | 40.0% | |
| TGAGAGATTAGAGAGAGAGT+TGG | + | chr2.4:13240765-13240784 | MS.gene35520:intron | 40.0% | |
| TGCAATTCGTCTACTGGATT+TGG | + | chr2.4:13240658-13240677 | MS.gene35520:intron | 40.0% | |
| TGGTAGAAACTAGACTTAGG+TGG | + | chr2.4:13240811-13240830 | MS.gene35520:intron | 40.0% | |
| TTGAAGGCCAGTGCATTAAT+CGG | - | chr2.4:13242444-13242463 | None:intergenic | 40.0% | |
| TTGGAGTTTCCCCAAATTAG+GGG | - | chr2.4:13241064-13241083 | None:intergenic | 40.0% | |
| ! | AACTTCTGAAAGAAAGGGGT+TGG | - | chr2.4:13241999-13242018 | None:intergenic | 40.0% |
| ! | AAGAAATTGGGGGTGTGAAA+GGG | + | chr2.4:13242409-13242428 | MS.gene35520:CDS | 40.0% |
| ! | ACTTTGTTTGGGAGTTTGGA+GGG | - | chr2.4:13241274-13241293 | None:intergenic | 40.0% |
| ! | AGGATGTACCTTTTTCCATC+AGG | - | chr2.4:13242468-13242487 | None:intergenic | 40.0% |
| ! | CATTCGTATTTGGGATTCTG+AGG | + | chr2.4:13240269-13240288 | MS.gene35520:CDS | 40.0% |
| ! | CTGATCAGACTGTTAAGTTG+TGG | + | chr2.4:13239872-13239891 | MS.gene35520:CDS | 40.0% |
| ! | GGATGTACCTTTTTCCATCA+GGG | - | chr2.4:13242467-13242486 | None:intergenic | 40.0% |
| ! | GTGTTACTCCAGTCATTGTA+TGG | + | chr2.4:13242166-13242185 | MS.gene35520:intron | 40.0% |
| ! | TACTGGGTTGGATAGGAATA+TGG | + | chr2.4:13241321-13241340 | MS.gene35520:intron | 40.0% |
| ! | TAGAGATTACTGGGTTGGAT+AGG | + | chr2.4:13241314-13241333 | MS.gene35520:intron | 40.0% |
| ! | TTTTGATGAAAGGCCATGAG+AGG | + | chr2.4:13239668-13239687 | MS.gene35520:CDS | 40.0% |
| ! | TTTTGGACCGATTAATGCAC+TGG | + | chr2.4:13242434-13242453 | MS.gene35520:CDS | 40.0% |
| ! | TTTTTGTAGGTGGTACTTGG+AGG | + | chr2.4:13242215-13242234 | MS.gene35520:intron | 40.0% |
| !! | AGGTCTGTTGATTTCTCTGT+TGG | + | chr2.4:13239946-13239965 | MS.gene35520:CDS | 40.0% |
| !! | CTCTTGTTGTTGCTAACACT+CGG | + | chr2.4:13241415-13241434 | MS.gene35520:intron | 40.0% |
| !! | CTGATAATGGTCTTGTTGAG+TGG | - | chr2.4:13240231-13240250 | None:intergenic | 40.0% |
| !!! | TTTTCAAGTGGAGGAGAAGA+TGG | + | chr2.4:13243374-13243393 | MS.gene35520:CDS | 40.0% |
| AAACAGCACCGTTATGACCA+CGG | - | chr2.4:13239804-13239823 | None:intergenic | 45.0% | |
| AACCTCCCAATGCCCAAATT+AGG | - | chr2.4:13241017-13241036 | None:intergenic | 45.0% | |
| AAGGAGAGTAGATCTGATGG+AGG | + | chr2.4:13240871-13240890 | MS.gene35520:intron | 45.0% | |
| AAGTTGTGGAATGTGCAGAC+TGG | + | chr2.4:13239886-13239905 | MS.gene35520:CDS | 45.0% | |
| AATCACTAGAGGTAGATGCC+AGG | + | chr2.4:13240901-13240920 | MS.gene35520:intron | 45.0% | |
| ACAACAACTGATCATCGTGC+TGG | + | chr2.4:13242260-13242279 | MS.gene35520:CDS | 45.0% | |
| ACCTCCCAATGCCCAAATTA+GGG | - | chr2.4:13241016-13241035 | None:intergenic | 45.0% | |
| ACGAATGACAGCATCTTCTC+CGG | - | chr2.4:13240256-13240275 | None:intergenic | 45.0% | |
| ACTAAGTGGAATCGGTTGCA+TGG | - | chr2.4:13241378-13241397 | None:intergenic | 45.0% | |
| AGAAAAGAAGATCGCCGTCA+AGG | - | chr2.4:13239717-13239736 | None:intergenic | 45.0% | |
| AGGAGAGTAGATCTGATGGA+GGG | + | chr2.4:13240872-13240891 | MS.gene35520:intron | 45.0% | |
| AGTTATTCTAGGTCCTCACC+TGG | - | chr2.4:13240922-13240941 | None:intergenic | 45.0% | |
| ATTGGGGATGTCTGGTATAC+TGG | + | chr2.4:13240535-13240554 | MS.gene35520:intron | 45.0% | |
| CATTTGAGCGAGTAGTGCTT+TGG | + | chr2.4:13240959-13240978 | MS.gene35520:intron | 45.0% | |
| CCACTTAGTTGGATAAGGCT+TGG | + | chr2.4:13241389-13241408 | MS.gene35520:intron | 45.0% | |
| CCTTCAACCCTGATGGAAAA+AGG | + | chr2.4:13242457-13242476 | MS.gene35520:CDS | 45.0% | |
| CTCCCTTGATAAGTCTGCTA+AGG | + | chr2.4:13241599-13241618 | MS.gene35520:CDS | 45.0% | |
| GAAGAAAAACTGGGCATGGT+CGG | - | chr2.4:13242776-13242795 | None:intergenic | 45.0% | |
| GAGAAATCAACAGACCTAGC+AGG | - | chr2.4:13239943-13239962 | None:intergenic | 45.0% | |
| GATGGTTCACATTTCTGCAC+TGG | + | chr2.4:13241576-13241595 | MS.gene35520:CDS | 45.0% | |
| GCCGAGGAAAGTTCCATAAA+CGG | - | chr2.4:13240000-13240019 | None:intergenic | 45.0% | |
| GCTTGTAATTAAGGGACCTC+AGG | + | chr2.4:13240179-13240198 | MS.gene35520:CDS | 45.0% | |
| GGTTAAATAGGGACACCACA+TGG | - | chr2.4:13243021-13243040 | None:intergenic | 45.0% | |
| TAATAAGCCGACCGGAATCA+CGG | - | chr2.4:13239843-13239862 | None:intergenic | 45.0% | |
| TGGAGTTTCCCCAAATTAGG+GGG | - | chr2.4:13241063-13241082 | None:intergenic | 45.0% | |
| TTATCGGCAAACCAAACGGT+GGG | - | chr2.4:13239760-13239779 | None:intergenic | 45.0% | |
| ! | CCAAGCCTTATCCAACTAAG+TGG | - | chr2.4:13241392-13241411 | None:intergenic | 45.0% |
| ! | CCTTTTTCCATCAGGGTTGA+AGG | - | chr2.4:13242460-13242479 | None:intergenic | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr2.4:13241273-13241292 | None:intergenic | 45.0% |
| ! | GAAGAAATTGGGGGTGTGAA+AGG | + | chr2.4:13242408-13242427 | MS.gene35520:CDS | 45.0% |
| ! | GACATTGTAACCGCATTGAC+AGG | - | chr2.4:13241779-13241798 | None:intergenic | 45.0% |
| ! | GACTTTGTTTGGGAGTTTGG+AGG | - | chr2.4:13241275-13241294 | None:intergenic | 45.0% |
| ! | TGCAACCGATTCCACTTAGT+TGG | + | chr2.4:13241378-13241397 | MS.gene35520:intron | 45.0% |
| !! | ACCGTTTGGTTTGCCGATAA+CGG | + | chr2.4:13239760-13239779 | MS.gene35520:CDS | 45.0% |
| !! | ATCTTCTCCGGCACTGATAA+TGG | - | chr2.4:13240244-13240263 | None:intergenic | 45.0% |
| !! | GCTCTATTGATTCTTCCCTG+AGG | - | chr2.4:13240198-13240217 | None:intergenic | 45.0% |
| !! | GTATTTGGGATTCTGAGGTG+AGG | + | chr2.4:13240274-13240293 | MS.gene35520:intron | 45.0% |
| !! | TGTCTTGAGGAGGGTTTTGA+AGG | + | chr2.4:13241086-13241105 | MS.gene35520:intron | 45.0% |
| !!! | GTCTTGAGGAGGGTTTTGAA+GGG | + | chr2.4:13241087-13241106 | MS.gene35520:intron | 45.0% |
| AAGACCACAATCCCACCGTT+TGG | + | chr2.4:13239746-13239765 | MS.gene35520:CDS | 50.0% | |
| AATAAGCCGACCGGAATCAC+GGG | - | chr2.4:13239842-13239861 | None:intergenic | 50.0% | |
| ACAAGAGGGCCCCAAAACTA+CGG | - | chr2.4:13242861-13242880 | None:intergenic | 50.0% | |
| ACTGCCAGTAATAAGCCGAC+CGG | - | chr2.4:13239851-13239870 | None:intergenic | 50.0% | |
| ATGTTTCCCGTGATTCCGGT+CGG | + | chr2.4:13239833-13239852 | MS.gene35520:CDS | 50.0% | |
| CAAACCAAACGGTGGGATTG+TGG | - | chr2.4:13239753-13239772 | None:intergenic | 50.0% | |
| CCTCCCAATGCCCAAATTAG+GGG | - | chr2.4:13241015-13241034 | None:intergenic | 50.0% | |
| CTTACGGTCAGCAGGATCTT+TGG | - | chr2.4:13240043-13240062 | None:intergenic | 50.0% | |
| CTTGTTGAGTGGTCCCCAAA+TGG | - | chr2.4:13240220-13240239 | None:intergenic | 50.0% | |
| GACAGAACGTCCTGTCAATG+CGG | + | chr2.4:13241766-13241785 | MS.gene35520:CDS | 50.0% | |
| GCCGTTATCGGCAAACCAAA+CGG | - | chr2.4:13239764-13239783 | None:intergenic | 50.0% | |
| GCGTTTAACATGAATCGCCG+AGG | - | chr2.4:13240016-13240035 | None:intergenic | 50.0% | |
| GCTTGATACTTACGGTCAGC+AGG | - | chr2.4:13240051-13240070 | None:intergenic | 50.0% | |
| GGCACTTACCGTGGTCATAA+CGG | + | chr2.4:13239793-13239812 | MS.gene35520:CDS | 50.0% | |
| GTTATCGGCAAACCAAACGG+TGG | - | chr2.4:13239761-13239780 | None:intergenic | 50.0% | |
| TCACTCGCCAAATCTGCTGA+TGG | + | chr2.4:13241558-13241577 | MS.gene35520:CDS | 50.0% | |
| TGAGCGAGTAGTGCTTTGGT+GGG | + | chr2.4:13240963-13240982 | MS.gene35520:intron | 50.0% | |
| TGCGATGTTTCCCGTGATTC+CGG | + | chr2.4:13239829-13239848 | MS.gene35520:CDS | 50.0% | |
| TTGAGCGAGTAGTGCTTTGG+TGG | + | chr2.4:13240962-13240981 | MS.gene35520:intron | 50.0% | |
| TTGTAGGTGGTACTTGGAGG+TGG | + | chr2.4:13242218-13242237 | MS.gene35520:intron | 50.0% | |
| ! | GATTCCGGTCGGCTTATTAC+TGG | + | chr2.4:13239844-13239863 | MS.gene35520:CDS | 50.0% |
| !! | GTGGTCATAACGGTGCTGTT+TGG | + | chr2.4:13239803-13239822 | MS.gene35520:CDS | 50.0% |
| CTAGAGGTAGATGCCAGGTG+AGG | + | chr2.4:13240906-13240925 | MS.gene35520:intron | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | - | chr2.4:13241269-13241288 | None:intergenic | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | - | chr2.4:13241270-13241289 | None:intergenic | 55.0% | |
| ! | GAGTTTGGAGGGGAGGGTTT+TGG | - | chr2.4:13241263-13241282 | None:intergenic | 55.0% |
| !! | CCCCTAATTTGGGCATTGGG+AGG | + | chr2.4:13241012-13241031 | MS.gene35520:intron | 55.0% |
| !! | TCTCTTGCTGGCTTGCAGAC+TGG | + | chr2.4:13241483-13241502 | MS.gene35520:intron | 55.0% |
| !! | TTTGGAGGGGAGGGTTTTGG+AGG | - | chr2.4:13241260-13241279 | None:intergenic | 55.0% |
| !!! | GGGGGTGTGAAAGGGCATTT+TGG | + | chr2.4:13242417-13242436 | MS.gene35520:CDS | 55.0% |
| !!! | TTGGAGGGGAGGGTTTTGGA+GGG | - | chr2.4:13241259-13241278 | None:intergenic | 55.0% |
| GAACGTCTCGGCACTTACCG+TGG | + | chr2.4:13239784-13239803 | MS.gene35520:CDS | 60.0% | |
| GCCGAGACGTTCGCCGTTAT+CGG | - | chr2.4:13239776-13239795 | None:intergenic | 60.0% | |
| GGTGGTACTTGGAGGTGGTC+AGG | + | chr2.4:13242223-13242242 | MS.gene35520:intron | 60.0% | |
| ! | GCCGATAACGGCGAACGTCT+CGG | + | chr2.4:13239772-13239791 | MS.gene35520:CDS | 60.0% |
| !! | GCACTGGCCTTCAACCCTGA+TGG | + | chr2.4:13242450-13242469 | MS.gene35520:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 13239658 | 13243448 | 13239658 | ID=MS.gene35520 |
| chr2.4 | mRNA | 13239658 | 13243448 | 13239658 | ID=MS.gene35520.t1;Parent=MS.gene35520 |
| chr2.4 | exon | 13239658 | 13240057 | 13239658 | ID=MS.gene35520.t1.exon1;Parent=MS.gene35520.t1 |
| chr2.4 | CDS | 13239658 | 13240057 | 13239658 | ID=cds.MS.gene35520.t1;Parent=MS.gene35520.t1 |
| chr2.4 | exon | 13240163 | 13240290 | 13240163 | ID=MS.gene35520.t1.exon2;Parent=MS.gene35520.t1 |
| chr2.4 | CDS | 13240163 | 13240290 | 13240163 | ID=cds.MS.gene35520.t1;Parent=MS.gene35520.t1 |
| chr2.4 | exon | 13241501 | 13241620 | 13241501 | ID=MS.gene35520.t1.exon3;Parent=MS.gene35520.t1 |
| chr2.4 | CDS | 13241501 | 13241620 | 13241501 | ID=cds.MS.gene35520.t1;Parent=MS.gene35520.t1 |
| chr2.4 | exon | 13241725 | 13241814 | 13241725 | ID=MS.gene35520.t1.exon4;Parent=MS.gene35520.t1 |
| chr2.4 | CDS | 13241725 | 13241814 | 13241725 | ID=cds.MS.gene35520.t1;Parent=MS.gene35520.t1 |
| chr2.4 | exon | 13242224 | 13242310 | 13242224 | ID=MS.gene35520.t1.exon5;Parent=MS.gene35520.t1 |
| chr2.4 | CDS | 13242224 | 13242310 | 13242224 | ID=cds.MS.gene35520.t1;Parent=MS.gene35520.t1 |
| chr2.4 | exon | 13242399 | 13242478 | 13242399 | ID=MS.gene35520.t1.exon6;Parent=MS.gene35520.t1 |
| chr2.4 | CDS | 13242399 | 13242478 | 13242399 | ID=cds.MS.gene35520.t1;Parent=MS.gene35520.t1 |
| chr2.4 | exon | 13243373 | 13243448 | 13243373 | ID=MS.gene35520.t1.exon7;Parent=MS.gene35520.t1 |
| chr2.4 | CDS | 13243373 | 13243448 | 13243373 | ID=cds.MS.gene35520.t1;Parent=MS.gene35520.t1 |
| Gene Sequence |
| Protein sequence |
