Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055060.t1 | GAU34167.1 | 79.3 | 241 | 44 | 2 | 1 | 236 | 1 | 240 | 1.60E-101 | 379 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055060.t1 | Q84LH3 | 33.8 | 154 | 97 | 4 | 78 | 229 | 128 | 278 | 6.0e-17 | 89.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055060.t1 | A0A2Z6NW07 | 79.3 | 241 | 44 | 2 | 1 | 236 | 1 | 240 | 1.1e-101 | 379.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04991 | MS.gene055060 | 0.825731 | 3.99E-54 | -1.69E-46 |
| MS.gene055060 | MS.gene23961 | -0.804338 | 2.27E-49 | -1.69E-46 |
| MS.gene055060 | MS.gene39313 | -0.807405 | 5.14E-50 | -1.69E-46 |
| MS.gene055060 | MS.gene45980 | 0.852219 | 5.33E-61 | -1.69E-46 |
| MS.gene055060 | MS.gene57217 | 0.821184 | 4.62E-53 | -1.69E-46 |
| MS.gene055060 | MS.gene80182 | 0.81515 | 1.07E-51 | -1.69E-46 |
| MS.gene055060 | MS.gene84632 | 0.863776 | 1.96E-64 | -1.69E-46 |
| MS.gene055060 | MS.gene92043 | -0.834838 | 2.38E-56 | -1.69E-46 |
| MS.gene055060 | MS.gene94737 | 0.821852 | 3.24E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055060.t1 | AT4G13870 | 33.766 | 154 | 97 | 4 | 78 | 229 | 128 | 278 | 1.76e-20 | 87.8 |
| MS.gene055060.t1 | AT4G13870 | 33.766 | 154 | 97 | 4 | 78 | 229 | 128 | 278 | 2.63e-20 | 87.4 |
| MS.gene055060.t1 | AT3G12410 | 29.577 | 213 | 124 | 7 | 38 | 226 | 12 | 222 | 3.92e-19 | 83.2 |
| MS.gene055060.t1 | AT2G36110 | 34.615 | 156 | 92 | 4 | 73 | 226 | 51 | 198 | 1.46e-17 | 79.3 |
| MS.gene055060.t1 | AT3G12460 | 25.676 | 222 | 131 | 5 | 38 | 226 | 11 | 231 | 6.65e-16 | 74.7 |
| MS.gene055060.t1 | AT3G12430 | 32.624 | 141 | 92 | 3 | 88 | 226 | 91 | 230 | 2.83e-15 | 72.8 |
| MS.gene055060.t1 | AT3G12470 | 32.692 | 156 | 101 | 4 | 73 | 226 | 51 | 204 | 1.35e-14 | 70.9 |
| MS.gene055060.t1 | AT3G12420 | 29.586 | 169 | 77 | 5 | 38 | 165 | 11 | 178 | 9.86e-14 | 67.8 |
| MS.gene055060.t1 | AT3G12440 | 31.176 | 170 | 109 | 5 | 66 | 228 | 179 | 347 | 2.94e-13 | 68.6 |
Find 98 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGGTGTTGGTGTGGAGTT+TGG | 0.184677 | 7.4:+37952834 | None:intergenic |
| GTTGGTGTGGAGTTTGGGTT+GGG | 0.250221 | 7.4:+37952840 | None:intergenic |
| GGGATAATCCTTGGCTTGAT+TGG | 0.253159 | 7.4:-37952287 | MS.gene055060:CDS |
| CGAGGATTACGAGGAGTAGA+TGG | 0.299164 | 7.4:-37952308 | MS.gene055060:CDS |
| GTGGAGTTTGGGTTGGGGAT+TGG | 0.299229 | 7.4:+37952846 | None:intergenic |
| GGGAACAGGTGAGGAGGGTT+TGG | 0.300493 | 7.4:+37952730 | None:intergenic |
| TCCTGGCCGCGTTGGGAGTT+TGG | 0.310200 | 7.4:+37952630 | None:intergenic |
| GAAGAGGGAAGTGGGGATGG+AGG | 0.336823 | 7.4:+37952539 | None:intergenic |
| ACACCGACGAATCTGTTGTT+AGG | 0.342221 | 7.4:+37952501 | None:intergenic |
| AGAGGGAAGTGGGGATGGAG+GGG | 0.342491 | 7.4:+37952541 | None:intergenic |
| AGGAAGGTGAAGAGGGAAGT+GGG | 0.344657 | 7.4:+37952531 | None:intergenic |
| AGGGTGTTGGTGTGGAGTTT+GGG | 0.344936 | 7.4:+37952835 | None:intergenic |
| GTTGGGGATTGGCATGGAGA+TGG | 0.347337 | 7.4:+37952857 | None:intergenic |
| ATGTCGAGGCCGATGATTGC+GGG | 0.358531 | 7.4:+37952663 | None:intergenic |
| ACATTGGCGGAACGTGTTCT+TGG | 0.360085 | 7.4:-37952351 | MS.gene055060:CDS |
| TGTTGGTGTGGAGTTTGGGT+TGG | 0.368729 | 7.4:+37952839 | None:intergenic |
| TTGGGGATTGGCATGGAGAT+GGG | 0.373295 | 7.4:+37952858 | None:intergenic |
| GAGGGAAGTGGGGATGGAGG+GGG | 0.373533 | 7.4:+37952542 | None:intergenic |
| TGGAGATGGGTGTGTCGTTT+TGG | 0.376688 | 7.4:+37952871 | None:intergenic |
| CAGAGCTGGAGAGTGGCGGC+TGG | 0.386407 | 7.4:+37952603 | None:intergenic |
| TGGGTTATCCTGGCCGCGTT+GGG | 0.389115 | 7.4:+37952623 | None:intergenic |
| CCCCTTCTCACGTCGACACC+TGG | 0.392198 | 7.4:-37952710 | MS.gene055060:CDS |
| GGTGAAGAGGGAAGTGGGGA+TGG | 0.395784 | 7.4:+37952536 | None:intergenic |
| GGATAATCCTTGGCTTGATT+GGG | 0.406268 | 7.4:-37952286 | MS.gene055060:CDS |
| GTAGGTGTTGTGGGTGTCGT+AGG | 0.407318 | 7.4:+37952782 | None:intergenic |
| GAGTGGCGGCTGGGTTATCC+TGG | 0.409446 | 7.4:+37952613 | None:intergenic |
| GTTTGGGTTGGGGATTGGCA+TGG | 0.414282 | 7.4:+37952851 | None:intergenic |
| TCGTCGTCTTTATTCTCATC+AGG | 0.417576 | 7.4:-37952214 | MS.gene055060:CDS |
| CATTGGCGGAACGTGTTCTT+GGG | 0.419620 | 7.4:-37952350 | MS.gene055060:CDS |
| GAGGAAGGTGAAGAGGGAAG+TGG | 0.420070 | 7.4:+37952530 | None:intergenic |
| GTTAGAGAGGAAGGTGAAGA+GGG | 0.423894 | 7.4:+37952524 | None:intergenic |
| GTTGTTAGGGTTAGAGAGGA+AGG | 0.431930 | 7.4:+37952515 | None:intergenic |
| TCCTTGGCTTGATTGGGATC+AGG | 0.432986 | 7.4:-37952280 | MS.gene055060:CDS |
| TAGGTGTTGTGGGTGTCGTA+GGG | 0.434919 | 7.4:+37952783 | None:intergenic |
| TTGGTGTGGAGTTTGGGTTG+GGG | 0.447045 | 7.4:+37952841 | None:intergenic |
| AAGAGGGAAGTGGGGATGGA+GGG | 0.447586 | 7.4:+37952540 | None:intergenic |
| AGCGGTTGTTTGTGCAGAGC+TGG | 0.450077 | 7.4:+37952589 | None:intergenic |
| TCCAAACTCCCAACGCGGCC+AGG | 0.456447 | 7.4:-37952631 | MS.gene055060:CDS |
| GTCGACGTGAGAAGGGGAAC+AGG | 0.462430 | 7.4:+37952716 | None:intergenic |
| GGAAGGTGAAGAGGGAAGTG+GGG | 0.462479 | 7.4:+37952532 | None:intergenic |
| CTGGGTTATCCTGGCCGCGT+TGG | 0.465522 | 7.4:+37952622 | None:intergenic |
| GGTGATGGAGTAGGTGTTGT+GGG | 0.466954 | 7.4:+37952773 | None:intergenic |
| TTCAATAAGCTTCTCGATGT+CGG | 0.470727 | 7.4:+37952467 | None:intergenic |
| AGCCAGGTGTCGACGTGAGA+AGG | 0.472968 | 7.4:+37952708 | None:intergenic |
| ATCGTGATTTGTTGAGAAGT+GGG | 0.475315 | 7.4:-37952380 | MS.gene055060:CDS |
| GATGTTGAAGGGTGTTGGTG+TGG | 0.478561 | 7.4:+37952827 | None:intergenic |
| CCTTGCTGCTGAGGTGCTTG+AGG | 0.487145 | 7.4:-37952403 | MS.gene055060:CDS |
| GTCGATGAGGGTGATGTTGA+AGG | 0.488166 | 7.4:+37952815 | None:intergenic |
| GGTTAGAGAGGAAGGTGAAG+AGG | 0.488884 | 7.4:+37952523 | None:intergenic |
| AGTGGATGAGATGGAAGATA+AGG | 0.495101 | 7.4:+37952565 | None:intergenic |
| AATTCGCAACAGTGAGGTTG+TGG | 0.503020 | 7.4:+37952442 | None:intergenic |
| GCCAGGTGTCGACGTGAGAA+GGG | 0.503571 | 7.4:+37952709 | None:intergenic |
| GGAGTAGATGGGATAATCCT+TGG | 0.509726 | 7.4:-37952296 | MS.gene055060:CDS |
| GGTGTCGATGGTGATGGAGT+AGG | 0.510777 | 7.4:+37952764 | None:intergenic |
| GGATTGAGTTTCGAGGAGCC+AGG | 0.512276 | 7.4:+37952692 | None:intergenic |
| AGGGTGATGTTGAAGGGTGT+TGG | 0.516201 | 7.4:+37952822 | None:intergenic |
| TGAGGAGGGTTTGGATAGTG+AGG | 0.519634 | 7.4:+37952739 | None:intergenic |
| CACCGACGAATCTGTTGTTA+GGG | 0.519688 | 7.4:+37952502 | None:intergenic |
| GAGGGTGGTGTCGATGGTGA+TGG | 0.526984 | 7.4:+37952758 | None:intergenic |
| AACAACAGATTCGTCGGTGT+CGG | 0.527768 | 7.4:-37952498 | MS.gene055060:CDS |
| GAGAAGTGGGATTAAGACAT+TGG | 0.537806 | 7.4:-37952367 | MS.gene055060:CDS |
| GATAGTGAGGGTGGTGTCGA+TGG | 0.551753 | 7.4:+37952752 | None:intergenic |
| GAGAAGGGGAACAGGTGAGG+AGG | 0.554583 | 7.4:+37952724 | None:intergenic |
| GAGGGTTTGGATAGTGAGGG+TGG | 0.557558 | 7.4:+37952743 | None:intergenic |
| TCATCGGCCTCGACATCGAA+TGG | 0.559761 | 7.4:-37952656 | MS.gene055060:CDS |
| AGAGCTGGAGAGTGGCGGCT+GGG | 0.559909 | 7.4:+37952604 | None:intergenic |
| ATCTGTTGTTAGGGTTAGAG+AGG | 0.563682 | 7.4:+37952511 | None:intergenic |
| TTTGCGTAACCTTGCTGCTG+AGG | 0.567929 | 7.4:-37952412 | MS.gene055060:CDS |
| TCGATGAGGGTGATGTTGAA+GGG | 0.568102 | 7.4:+37952816 | None:intergenic |
| GAGGATTACGAGGAGTAGAT+GGG | 0.571746 | 7.4:-37952307 | MS.gene055060:CDS |
| TGTCGAGGCCGATGATTGCG+GGG | 0.579688 | 7.4:+37952664 | None:intergenic |
| AACCCTAACAACAGATTCGT+CGG | 0.580081 | 7.4:-37952504 | MS.gene055060:CDS |
| TGGTGATGGAGTAGGTGTTG+TGG | 0.580668 | 7.4:+37952772 | None:intergenic |
| AGGTGTTGTGGGTGTCGTAG+GGG | 0.584862 | 7.4:+37952784 | None:intergenic |
| GGGAGAGGGATTGAGTTTCG+AGG | 0.587929 | 7.4:+37952685 | None:intergenic |
| AGAAGGGGAACAGGTGAGGA+GGG | 0.593387 | 7.4:+37952725 | None:intergenic |
| GAGGAGGGTTTGGATAGTGA+GGG | 0.597013 | 7.4:+37952740 | None:intergenic |
| TGTTGTGGGTGTCGTAGGGG+AGG | 0.597459 | 7.4:+37952787 | None:intergenic |
| GATCGTGATTTGTTGAGAAG+TGG | 0.602959 | 7.4:-37952381 | MS.gene055060:CDS |
| GATGTCGAGGCCGATGATTG+CGG | 0.603787 | 7.4:+37952662 | None:intergenic |
| CGTGAGAAGGGGAACAGGTG+AGG | 0.606305 | 7.4:+37952721 | None:intergenic |
| ACCTGATCCCAATCAAGCCA+AGG | 0.609223 | 7.4:+37952279 | None:intergenic |
| AGGGGAGGTAGTTGTCGATG+AGG | 0.611336 | 7.4:+37952802 | None:intergenic |
| GGGGAGGTAGTTGTCGATGA+GGG | 0.612787 | 7.4:+37952803 | None:intergenic |
| TTGGACGCCATTCGATGTCG+AGG | 0.616614 | 7.4:+37952649 | None:intergenic |
| GTTTGTGCAGAGCTGGAGAG+TGG | 0.617217 | 7.4:+37952596 | None:intergenic |
| CCAGGTGTCGACGTGAGAAG+GGG | 0.618618 | 7.4:+37952710 | None:intergenic |
| AAGTGGGATTAAGACATTGG+CGG | 0.621013 | 7.4:-37952364 | MS.gene055060:CDS |
| AAGACGACGAGCAATCTCAA+AGG | 0.629952 | 7.4:+37952227 | None:intergenic |
| CCTCAAGCACCTCAGCAGCA+AGG | 0.633154 | 7.4:+37952403 | None:intergenic |
| CTACTCCTCGTAATCCTCGA+CGG | 0.639971 | 7.4:+37952312 | None:intergenic |
| TGTGCAGAGCTGGAGAGTGG+CGG | 0.640933 | 7.4:+37952599 | None:intergenic |
| AGAAACCGTCGAGGATTACG+AGG | 0.646063 | 7.4:-37952317 | MS.gene055060:CDS |
| TGAGATGGAAGATAAGGCAG+CGG | 0.659112 | 7.4:+37952571 | None:intergenic |
| GTCGAGGCCGATGATTGCGG+GGG | 0.672413 | 7.4:+37952665 | None:intergenic |
| CAACATAATTCGCAACAGTG+AGG | 0.699929 | 7.4:+37952436 | None:intergenic |
| AGATTGTTGAGAAACCGTCG+AGG | 0.740766 | 7.4:-37952326 | MS.gene055060:CDS |
| TGGCGTCCAAACTCCCAACG+CGG | 0.767636 | 7.4:-37952636 | MS.gene055060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TTCAATAAGCTTCTCGATGT+CGG | + | chr7.4:37952630-37952649 | None:intergenic | 35.0% | |
| !! | ATCGTGATTTGTTGAGAAGT+GGG | - | chr7.4:37952714-37952733 | MS.gene055060:CDS | 35.0% |
| AACCCTAACAACAGATTCGT+CGG | - | chr7.4:37952590-37952609 | MS.gene055060:CDS | 40.0% | |
| AAGTGGGATTAAGACATTGG+CGG | - | chr7.4:37952730-37952749 | MS.gene055060:CDS | 40.0% | |
| AGTGGATGAGATGGAAGATA+AGG | + | chr7.4:37952532-37952551 | None:intergenic | 40.0% | |
| ATCTGTTGTTAGGGTTAGAG+AGG | + | chr7.4:37952586-37952605 | None:intergenic | 40.0% | |
| CAACATAATTCGCAACAGTG+AGG | + | chr7.4:37952661-37952680 | None:intergenic | 40.0% | |
| GAGAAGTGGGATTAAGACAT+TGG | - | chr7.4:37952727-37952746 | MS.gene055060:CDS | 40.0% | |
| TCGTCGTCTTTATTCTCATC+AGG | - | chr7.4:37952880-37952899 | MS.gene055060:CDS | 40.0% | |
| ! | GGATAATCCTTGGCTTGATT+GGG | - | chr7.4:37952808-37952827 | MS.gene055060:CDS | 40.0% |
| ! | TTTTGGTCAACGAGGGTAAT+CGG | + | chr7.4:37952209-37952228 | None:intergenic | 40.0% |
| !! | GATCGTGATTTGTTGAGAAG+TGG | - | chr7.4:37952713-37952732 | MS.gene055060:CDS | 40.0% |
| AACAACAGATTCGTCGGTGT+CGG | - | chr7.4:37952596-37952615 | MS.gene055060:CDS | 45.0% | |
| AAGACGACGAGCAATCTCAA+AGG | + | chr7.4:37952870-37952889 | None:intergenic | 45.0% | |
| AATTCGCAACAGTGAGGTTG+TGG | + | chr7.4:37952655-37952674 | None:intergenic | 45.0% | |
| ACACCGACGAATCTGTTGTT+AGG | + | chr7.4:37952596-37952615 | None:intergenic | 45.0% | |
| AGATTGTTGAGAAACCGTCG+AGG | - | chr7.4:37952768-37952787 | MS.gene055060:CDS | 45.0% | |
| CACCGACGAATCTGTTGTTA+GGG | + | chr7.4:37952595-37952614 | None:intergenic | 45.0% | |
| GAGGATTACGAGGAGTAGAT+GGG | - | chr7.4:37952787-37952806 | MS.gene055060:CDS | 45.0% | |
| GGAGTAGATGGGATAATCCT+TGG | - | chr7.4:37952798-37952817 | MS.gene055060:CDS | 45.0% | |
| GTTAGAGAGGAAGGTGAAGA+GGG | + | chr7.4:37952573-37952592 | None:intergenic | 45.0% | |
| GTTGTTAGGGTTAGAGAGGA+AGG | + | chr7.4:37952582-37952601 | None:intergenic | 45.0% | |
| TCGATGAGGGTGATGTTGAA+GGG | + | chr7.4:37952281-37952300 | None:intergenic | 45.0% | |
| TGAGATGGAAGATAAGGCAG+CGG | + | chr7.4:37952526-37952545 | None:intergenic | 45.0% | |
| ! | GGGATAATCCTTGGCTTGAT+TGG | - | chr7.4:37952807-37952826 | MS.gene055060:CDS | 45.0% |
| !!! | TGTGTCGTTTTGGTCAACGA+GGG | + | chr7.4:37952216-37952235 | None:intergenic | 45.0% |
| ACATTGGCGGAACGTGTTCT+TGG | - | chr7.4:37952743-37952762 | MS.gene055060:CDS | 50.0% | |
| ACCTGATCCCAATCAAGCCA+AGG | + | chr7.4:37952818-37952837 | None:intergenic | 50.0% | |
| AGAAACCGTCGAGGATTACG+AGG | - | chr7.4:37952777-37952796 | MS.gene055060:CDS | 50.0% | |
| AGGAAGGTGAAGAGGGAAGT+GGG | + | chr7.4:37952566-37952585 | None:intergenic | 50.0% | |
| CATTGGCGGAACGTGTTCTT+GGG | - | chr7.4:37952744-37952763 | MS.gene055060:CDS | 50.0% | |
| CGAGGATTACGAGGAGTAGA+TGG | - | chr7.4:37952786-37952805 | MS.gene055060:CDS | 50.0% | |
| CTACTCCTCGTAATCCTCGA+CGG | + | chr7.4:37952785-37952804 | None:intergenic | 50.0% | |
| GAGGAGGGTTTGGATAGTGA+GGG | + | chr7.4:37952357-37952376 | None:intergenic | 50.0% | |
| GGTTAGAGAGGAAGGTGAAG+AGG | + | chr7.4:37952574-37952593 | None:intergenic | 50.0% | |
| GTCGATGAGGGTGATGTTGA+AGG | + | chr7.4:37952282-37952301 | None:intergenic | 50.0% | |
| TGAGGAGGGTTTGGATAGTG+AGG | + | chr7.4:37952358-37952377 | None:intergenic | 50.0% | |
| TGTTGGTGTGGAGTTTGGGT+TGG | + | chr7.4:37952258-37952277 | None:intergenic | 50.0% | |
| TTTGCGTAACCTTGCTGCTG+AGG | - | chr7.4:37952682-37952701 | MS.gene055060:CDS | 50.0% | |
| ! | AGGGTGATGTTGAAGGGTGT+TGG | + | chr7.4:37952275-37952294 | None:intergenic | 50.0% |
| ! | GTTGGTGTGGAGTTTGGGTT+GGG | + | chr7.4:37952257-37952276 | None:intergenic | 50.0% |
| ! | TAGGTGTTGTGGGTGTCGTA+GGG | + | chr7.4:37952314-37952333 | None:intergenic | 50.0% |
| ! | TCCTTGGCTTGATTGGGATC+AGG | - | chr7.4:37952814-37952833 | MS.gene055060:CDS | 50.0% |
| ! | TTGGGGATTGGCATGGAGAT+GGG | + | chr7.4:37952239-37952258 | None:intergenic | 50.0% |
| !! | AAGGGTGTTGGTGTGGAGTT+TGG | + | chr7.4:37952263-37952282 | None:intergenic | 50.0% |
| !! | AGGGTGTTGGTGTGGAGTTT+GGG | + | chr7.4:37952262-37952281 | None:intergenic | 50.0% |
| !! | GATGTTGAAGGGTGTTGGTG+TGG | + | chr7.4:37952270-37952289 | None:intergenic | 50.0% |
| !! | GGTGATGGAGTAGGTGTTGT+GGG | + | chr7.4:37952324-37952343 | None:intergenic | 50.0% |
| !! | TGGTGATGGAGTAGGTGTTG+TGG | + | chr7.4:37952325-37952344 | None:intergenic | 50.0% |
| !! | TTGGTGTGGAGTTTGGGTTG+GGG | + | chr7.4:37952256-37952275 | None:intergenic | 50.0% |
| !!! | GTGTGTCGTTTTGGTCAACG+AGG | + | chr7.4:37952217-37952236 | None:intergenic | 50.0% |
| !!! | TGGAGATGGGTGTGTCGTTT+TGG | + | chr7.4:37952226-37952245 | None:intergenic | 50.0% |
| AAGAGGGAAGTGGGGATGGA+GGG | + | chr7.4:37952557-37952576 | None:intergenic | 55.0% | |
| AGAAGGGGAACAGGTGAGGA+GGG | + | chr7.4:37952372-37952391 | None:intergenic | 55.0% | |
| AGCGGTTGTTTGTGCAGAGC+TGG | + | chr7.4:37952508-37952527 | None:intergenic | 55.0% | |
| AGGGGAGGTAGTTGTCGATG+AGG | + | chr7.4:37952295-37952314 | None:intergenic | 55.0% | |
| ATGTCGAGGCCGATGATTGC+GGG | + | chr7.4:37952434-37952453 | None:intergenic | 55.0% | |
| GAGGAAGGTGAAGAGGGAAG+TGG | + | chr7.4:37952567-37952586 | None:intergenic | 55.0% | |
| GAGGGTTTGGATAGTGAGGG+TGG | + | chr7.4:37952354-37952373 | None:intergenic | 55.0% | |
| GATGTCGAGGCCGATGATTG+CGG | + | chr7.4:37952435-37952454 | None:intergenic | 55.0% | |
| GGAAGGTGAAGAGGGAAGTG+GGG | + | chr7.4:37952565-37952584 | None:intergenic | 55.0% | |
| GGATTGAGTTTCGAGGAGCC+AGG | + | chr7.4:37952405-37952424 | None:intergenic | 55.0% | |
| GGGAGAGGGATTGAGTTTCG+AGG | + | chr7.4:37952412-37952431 | None:intergenic | 55.0% | |
| GGGGAGGTAGTTGTCGATGA+GGG | + | chr7.4:37952294-37952313 | None:intergenic | 55.0% | |
| GTTTGTGCAGAGCTGGAGAG+TGG | + | chr7.4:37952501-37952520 | None:intergenic | 55.0% | |
| TCATCGGCCTCGACATCGAA+TGG | - | chr7.4:37952438-37952457 | MS.gene055060:CDS | 55.0% | |
| TTGGACGCCATTCGATGTCG+AGG | + | chr7.4:37952448-37952467 | None:intergenic | 55.0% | |
| ! | AGGTGTTGTGGGTGTCGTAG+GGG | + | chr7.4:37952313-37952332 | None:intergenic | 55.0% |
| ! | GATAGTGAGGGTGGTGTCGA+TGG | + | chr7.4:37952345-37952364 | None:intergenic | 55.0% |
| ! | GTAGGTGTTGTGGGTGTCGT+AGG | + | chr7.4:37952315-37952334 | None:intergenic | 55.0% |
| ! | GTTGGGGATTGGCATGGAGA+TGG | + | chr7.4:37952240-37952259 | None:intergenic | 55.0% |
| !! | GGTGTCGATGGTGATGGAGT+AGG | + | chr7.4:37952333-37952352 | None:intergenic | 55.0% |
| !! | GTGGAGTTTGGGTTGGGGAT+TGG | + | chr7.4:37952251-37952270 | None:intergenic | 55.0% |
| !! | GTTTGGGTTGGGGATTGGCA+TGG | + | chr7.4:37952246-37952265 | None:intergenic | 55.0% |
| AGAGGGAAGTGGGGATGGAG+GGG | + | chr7.4:37952556-37952575 | None:intergenic | 60.0% | |
| CCTCAAGCACCTCAGCAGCA+AGG | + | chr7.4:37952694-37952713 | None:intergenic | 60.0% | |
| CGTGAGAAGGGGAACAGGTG+AGG | + | chr7.4:37952376-37952395 | None:intergenic | 60.0% | |
| GAAGAGGGAAGTGGGGATGG+AGG | + | chr7.4:37952558-37952577 | None:intergenic | 60.0% | |
| GAGAAGGGGAACAGGTGAGG+AGG | + | chr7.4:37952373-37952392 | None:intergenic | 60.0% | |
| GGGAACAGGTGAGGAGGGTT+TGG | + | chr7.4:37952367-37952386 | None:intergenic | 60.0% | |
| GGTGAAGAGGGAAGTGGGGA+TGG | + | chr7.4:37952561-37952580 | None:intergenic | 60.0% | |
| GTCGACGTGAGAAGGGGAAC+AGG | + | chr7.4:37952381-37952400 | None:intergenic | 60.0% | |
| TCCCTCTCCCCCGCAATCAT+CGG | - | chr7.4:37952422-37952441 | MS.gene055060:CDS | 60.0% | |
| TGGAGGGGGAGTGGATGAGA+TGG | + | chr7.4:37952541-37952560 | None:intergenic | 60.0% | |
| TGGCGTCCAAACTCCCAACG+CGG | - | chr7.4:37952458-37952477 | MS.gene055060:CDS | 60.0% | |
| TGGGTTATCCTGGCCGCGTT+GGG | + | chr7.4:37952474-37952493 | None:intergenic | 60.0% | |
| TGTCGAGGCCGATGATTGCG+GGG | + | chr7.4:37952433-37952452 | None:intergenic | 60.0% | |
| TGTGCAGAGCTGGAGAGTGG+CGG | + | chr7.4:37952498-37952517 | None:intergenic | 60.0% | |
| ! | CCTTGCTGCTGAGGTGCTTG+AGG | - | chr7.4:37952691-37952710 | MS.gene055060:CDS | 60.0% |
| ! | TGTTGTGGGTGTCGTAGGGG+AGG | + | chr7.4:37952310-37952329 | None:intergenic | 60.0% |
| !! | AGCCAGGTGTCGACGTGAGA+AGG | + | chr7.4:37952389-37952408 | None:intergenic | 60.0% |
| !! | CCAGGTGTCGACGTGAGAAG+GGG | + | chr7.4:37952387-37952406 | None:intergenic | 60.0% |
| !! | GAGGGTGGTGTCGATGGTGA+TGG | + | chr7.4:37952339-37952358 | None:intergenic | 60.0% |
| !! | GCCAGGTGTCGACGTGAGAA+GGG | + | chr7.4:37952388-37952407 | None:intergenic | 60.0% |
| AAGTGGGGATGGAGGGGGAG+TGG | + | chr7.4:37952550-37952569 | None:intergenic | 65.0% | |
| AGAGCTGGAGAGTGGCGGCT+GGG | + | chr7.4:37952493-37952512 | None:intergenic | 65.0% | |
| CCCCTTCTCACGTCGACACC+TGG | - | chr7.4:37952384-37952403 | MS.gene055060:CDS | 65.0% | |
| CTGGGTTATCCTGGCCGCGT+TGG | + | chr7.4:37952475-37952494 | None:intergenic | 65.0% | |
| GAGGGAAGTGGGGATGGAGG+GGG | + | chr7.4:37952555-37952574 | None:intergenic | 65.0% | |
| GAGTGGCGGCTGGGTTATCC+TGG | + | chr7.4:37952484-37952503 | None:intergenic | 65.0% | |
| GCCGATGATTGCGGGGGAGA+GGG | + | chr7.4:37952426-37952445 | None:intergenic | 65.0% | |
| GTCGAGGCCGATGATTGCGG+GGG | + | chr7.4:37952432-37952451 | None:intergenic | 65.0% | |
| TCCAAACTCCCAACGCGGCC+AGG | - | chr7.4:37952463-37952482 | MS.gene055060:CDS | 65.0% | |
| TCCTGGCCGCGTTGGGAGTT+TGG | + | chr7.4:37952467-37952486 | None:intergenic | 65.0% | |
| CAGAGCTGGAGAGTGGCGGC+TGG | + | chr7.4:37952494-37952513 | None:intergenic | 70.0% | |
| GGCCGATGATTGCGGGGGAG+AGG | + | chr7.4:37952427-37952446 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 37952203 | 37952913 | 37952203 | ID=MS.gene055060 |
| chr7.4 | mRNA | 37952203 | 37952913 | 37952203 | ID=MS.gene055060.t1;Parent=MS.gene055060 |
| chr7.4 | exon | 37952203 | 37952913 | 37952203 | ID=MS.gene055060.t1.exon1;Parent=MS.gene055060.t1 |
| chr7.4 | CDS | 37952203 | 37952913 | 37952203 | ID=cds.MS.gene055060.t1;Parent=MS.gene055060.t1 |
| Gene Sequence |
| Protein sequence |
