Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055749.t1 | XP_013456102.1 | 99.2 | 649 | 5 | 0 | 1 | 649 | 1 | 649 | 0.00E+00 | 1258 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055749.t1 | P09189 | 92.8 | 653 | 41 | 2 | 1 | 649 | 1 | 651 | 0.0e+00 | 1176.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055749.t1 | A0A072UM13 | 99.2 | 649 | 5 | 0 | 1 | 649 | 1 | 649 | 0.0e+00 | 1258.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055749 | MS.gene055752 | 0.99746 | 6.38E-243 | -1.69E-46 |
| MS.gene055749 | MS.gene055753 | 0.90151 | 2.49E-78 | -1.69E-46 |
| MS.gene055749 | MS.gene41186 | 0.834535 | 2.83E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene055749 | MS.gene49154 | PPI |
| MS.gene055749 | MS.gene30654 | PPI |
| MS.gene055749 | MS.gene040499 | PPI |
| MS.gene02122 | MS.gene055749 | PPI |
| MS.gene055749 | MS.gene60613 | PPI |
| MS.gene055749 | MS.gene62607 | PPI |
| MS.gene055749 | MS.gene061126 | PPI |
| MS.gene055749 | MS.gene006231 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055749.t1 | MTR_4g063710 | 99.384 | 649 | 4 | 0 | 1 | 649 | 1 | 649 | 0.0 | 1325 |
| MS.gene055749.t1 | MTR_4g063720 | 99.230 | 649 | 5 | 0 | 1 | 649 | 1 | 649 | 0.0 | 1325 |
| MS.gene055749.t1 | MTR_7g024580 | 92.934 | 651 | 42 | 3 | 1 | 649 | 1 | 649 | 0.0 | 1239 |
| MS.gene055749.t1 | MTR_7g099680 | 92.296 | 649 | 50 | 0 | 1 | 649 | 1 | 649 | 0.0 | 1238 |
| MS.gene055749.t1 | MTR_7g024390 | 92.627 | 651 | 43 | 2 | 1 | 649 | 1 | 648 | 0.0 | 1230 |
| MS.gene055749.t1 | MTR_4g130540 | 87.768 | 654 | 74 | 3 | 1 | 649 | 1 | 653 | 0.0 | 1161 |
| MS.gene055749.t1 | MTR_6g033850 | 66.992 | 615 | 202 | 1 | 1 | 615 | 1 | 614 | 0.0 | 850 |
| MS.gene055749.t1 | MTR_7g026030 | 66.345 | 621 | 204 | 4 | 1 | 619 | 1 | 618 | 0.0 | 838 |
| MS.gene055749.t1 | MTR_2g017730 | 67.881 | 604 | 174 | 3 | 9 | 606 | 8 | 597 | 0.0 | 836 |
| MS.gene055749.t1 | MTR_6g033760 | 65.909 | 616 | 209 | 1 | 1 | 616 | 1 | 615 | 0.0 | 834 |
| MS.gene055749.t1 | MTR_7g025760 | 65.056 | 621 | 213 | 3 | 1 | 619 | 1 | 619 | 0.0 | 828 |
| MS.gene055749.t1 | MTR_7g021440 | 65.366 | 615 | 209 | 3 | 1 | 613 | 1 | 613 | 0.0 | 817 |
| MS.gene055749.t1 | MTR_2g038260 | 65.590 | 619 | 206 | 6 | 1 | 615 | 1 | 616 | 0.0 | 813 |
| MS.gene055749.t1 | MTR_5g066800 | 64.172 | 628 | 210 | 4 | 1 | 615 | 1 | 626 | 0.0 | 812 |
| MS.gene055749.t1 | MTR_7g025820 | 66.164 | 597 | 198 | 3 | 1 | 595 | 1 | 595 | 0.0 | 812 |
| MS.gene055749.t1 | MTR_8g032650 | 64.480 | 625 | 217 | 4 | 1 | 623 | 1 | 622 | 0.0 | 805 |
| MS.gene055749.t1 | MTR_2g032550 | 64.927 | 613 | 211 | 3 | 6 | 615 | 7 | 618 | 0.0 | 804 |
| MS.gene055749.t1 | MTR_8g099795 | 65.635 | 614 | 205 | 4 | 7 | 618 | 36 | 645 | 0.0 | 801 |
| MS.gene055749.t1 | MTR_7g025720 | 63.768 | 621 | 220 | 4 | 1 | 619 | 1 | 618 | 0.0 | 801 |
| MS.gene055749.t1 | MTR_8g099945 | 65.472 | 614 | 206 | 4 | 7 | 618 | 36 | 645 | 0.0 | 801 |
| MS.gene055749.t1 | MTR_7g026110 | 63.371 | 617 | 220 | 5 | 1 | 615 | 1 | 613 | 0.0 | 800 |
| MS.gene055749.t1 | MTR_7g025790 | 64.803 | 608 | 209 | 4 | 1 | 606 | 1 | 605 | 0.0 | 798 |
| MS.gene055749.t1 | MTR_7g451380 | 63.430 | 618 | 222 | 3 | 1 | 615 | 1 | 617 | 0.0 | 798 |
| MS.gene055749.t1 | MTR_7g025620 | 64.098 | 610 | 214 | 4 | 1 | 608 | 1 | 607 | 0.0 | 791 |
| MS.gene055749.t1 | MTR_7g078190 | 63.840 | 625 | 217 | 7 | 1 | 619 | 1 | 622 | 0.0 | 791 |
| MS.gene055749.t1 | MTR_7g024030 | 63.993 | 611 | 215 | 4 | 1 | 609 | 1 | 608 | 0.0 | 790 |
| MS.gene055749.t1 | MTR_6g033870 | 62.939 | 626 | 225 | 3 | 2 | 621 | 3 | 627 | 0.0 | 786 |
| MS.gene055749.t1 | MTR_7g025630 | 63.607 | 621 | 207 | 6 | 1 | 619 | 1 | 604 | 0.0 | 780 |
| MS.gene055749.t1 | MTR_6g033955 | 61.981 | 626 | 232 | 2 | 1 | 621 | 1 | 625 | 0.0 | 780 |
| MS.gene055749.t1 | MTR_7g026090 | 63.089 | 615 | 221 | 3 | 1 | 613 | 1 | 611 | 0.0 | 779 |
| MS.gene055749.t1 | MTR_2g022050 | 64.563 | 618 | 215 | 3 | 1 | 615 | 1 | 617 | 0.0 | 777 |
| MS.gene055749.t1 | MTR_7g078210 | 63.360 | 625 | 221 | 6 | 1 | 620 | 1 | 622 | 0.0 | 776 |
| MS.gene055749.t1 | MTR_4g079590 | 62.684 | 611 | 223 | 4 | 1 | 608 | 1 | 609 | 0.0 | 776 |
| MS.gene055749.t1 | MTR_7g025740 | 62.843 | 619 | 216 | 6 | 1 | 608 | 1 | 616 | 0.0 | 775 |
| MS.gene055749.t1 | MTR_7g029415 | 63.192 | 614 | 218 | 7 | 6 | 615 | 13 | 622 | 0.0 | 773 |
| MS.gene055749.t1 | MTR_2g437440 | 62.783 | 618 | 208 | 4 | 1 | 615 | 1 | 599 | 0.0 | 773 |
| MS.gene055749.t1 | MTR_7g025770 | 61.812 | 618 | 231 | 4 | 1 | 615 | 1 | 616 | 0.0 | 772 |
| MS.gene055749.t1 | MTR_6g033820 | 61.182 | 626 | 237 | 2 | 1 | 621 | 1 | 625 | 0.0 | 772 |
| MS.gene055749.t1 | MTR_8g103930 | 61.490 | 631 | 210 | 7 | 1 | 616 | 1 | 613 | 0.0 | 769 |
| MS.gene055749.t1 | MTR_7g026170 | 62.682 | 619 | 224 | 6 | 1 | 615 | 1 | 616 | 0.0 | 765 |
| MS.gene055749.t1 | MTR_7g011590 | 63.289 | 602 | 204 | 5 | 1 | 600 | 1 | 587 | 0.0 | 764 |
| MS.gene055749.t1 | MTR_2g038270 | 60.510 | 628 | 232 | 7 | 1 | 615 | 1 | 625 | 0.0 | 755 |
| MS.gene055749.t1 | MTR_7g074460 | 62.136 | 618 | 212 | 4 | 1 | 616 | 1 | 598 | 0.0 | 746 |
| MS.gene055749.t1 | MTR_7g026130 | 61.997 | 621 | 224 | 7 | 1 | 613 | 1 | 617 | 0.0 | 735 |
| MS.gene055749.t1 | MTR_2g032580 | 61.228 | 619 | 203 | 6 | 1 | 615 | 1 | 586 | 0.0 | 731 |
| MS.gene055749.t1 | MTR_4g063720 | 97.796 | 363 | 7 | 1 | 287 | 649 | 217 | 578 | 0.0 | 727 |
| MS.gene055749.t1 | MTR_4g063720 | 99.554 | 224 | 1 | 0 | 1 | 224 | 1 | 224 | 3.67e-155 | 459 |
| MS.gene055749.t1 | MTR_4g027145 | 58.954 | 631 | 240 | 8 | 1 | 615 | 1 | 628 | 0.0 | 724 |
| MS.gene055749.t1 | MTR_7g025260 | 61.913 | 575 | 215 | 3 | 49 | 621 | 21 | 593 | 0.0 | 721 |
| MS.gene055749.t1 | MTR_7g026140 | 60.556 | 611 | 216 | 8 | 1 | 606 | 1 | 591 | 0.0 | 718 |
| MS.gene055749.t1 | MTR_1g017130 | 58.429 | 611 | 209 | 7 | 1 | 608 | 1 | 569 | 0.0 | 704 |
| MS.gene055749.t1 | MTR_7g451360 | 57.971 | 621 | 196 | 7 | 1 | 617 | 1 | 560 | 0.0 | 695 |
| MS.gene055749.t1 | MTR_6g033800 | 64.639 | 526 | 183 | 2 | 90 | 615 | 1 | 523 | 0.0 | 695 |
| MS.gene055749.t1 | MTR_2g040260 | 82.250 | 400 | 69 | 1 | 1 | 400 | 1030 | 1427 | 0.0 | 677 |
| MS.gene055749.t1 | MTR_2g040370 | 84.576 | 389 | 58 | 1 | 4 | 392 | 1024 | 1410 | 0.0 | 671 |
| MS.gene055749.t1 | MTR_2g040370 | 83.161 | 386 | 62 | 2 | 4 | 388 | 1408 | 1791 | 0.0 | 636 |
| MS.gene055749.t1 | MTR_2g040370 | 84.576 | 389 | 58 | 1 | 4 | 392 | 1024 | 1410 | 0.0 | 671 |
| MS.gene055749.t1 | MTR_2g040370 | 83.117 | 385 | 62 | 2 | 4 | 387 | 1408 | 1790 | 0.0 | 634 |
| MS.gene055749.t1 | MTR_7g007000 | 56.543 | 619 | 218 | 7 | 1 | 614 | 1 | 573 | 0.0 | 669 |
| MS.gene055749.t1 | MTR_2g040160 | 80.000 | 400 | 78 | 1 | 1 | 400 | 1101 | 1498 | 0.0 | 656 |
| MS.gene055749.t1 | MTR_7g035155 | 54.854 | 618 | 220 | 7 | 1 | 615 | 1 | 562 | 0.0 | 646 |
| MS.gene055749.t1 | MTR_1g041565 | 55.212 | 614 | 198 | 10 | 6 | 615 | 2 | 542 | 0.0 | 640 |
| MS.gene055749.t1 | MTR_2g040220 | 71.586 | 454 | 111 | 4 | 1 | 436 | 1010 | 1463 | 0.0 | 639 |
| MS.gene055749.t1 | MTR_2g040220 | 55.660 | 212 | 36 | 5 | 446 | 649 | 1397 | 1558 | 6.63e-53 | 197 |
| MS.gene055749.t1 | MTR_2g040350 | 77.945 | 399 | 82 | 3 | 6 | 400 | 1035 | 1431 | 0.0 | 633 |
| MS.gene055749.t1 | MTR_2g040350 | 77.945 | 399 | 82 | 3 | 6 | 400 | 817 | 1213 | 0.0 | 632 |
| MS.gene055749.t1 | MTR_2g032160 | 72.267 | 375 | 102 | 1 | 1 | 373 | 1 | 375 | 0.0 | 577 |
| MS.gene055749.t1 | MTR_2g032160 | 41.414 | 99 | 57 | 1 | 519 | 616 | 365 | 463 | 1.97e-11 | 67.0 |
| MS.gene055749.t1 | MTR_2g010020 | 51.167 | 600 | 263 | 10 | 10 | 602 | 58 | 634 | 0.0 | 573 |
| MS.gene055749.t1 | MTR_2g010020 | 51.167 | 600 | 263 | 10 | 10 | 602 | 57 | 633 | 0.0 | 573 |
| MS.gene055749.t1 | MTR_4g092920 | 50.667 | 600 | 267 | 10 | 10 | 602 | 54 | 631 | 0.0 | 561 |
| MS.gene055749.t1 | MTR_2g005690 | 47.819 | 642 | 306 | 13 | 10 | 641 | 72 | 694 | 0.0 | 533 |
| MS.gene055749.t1 | MTR_6g034005 | 49.543 | 547 | 253 | 8 | 80 | 615 | 2 | 536 | 1.97e-166 | 493 |
| MS.gene055749.t1 | MTR_4g092920 | 50.685 | 511 | 227 | 8 | 90 | 594 | 1 | 492 | 4.58e-164 | 481 |
| MS.gene055749.t1 | MTR_1g077230 | 74.468 | 282 | 70 | 1 | 1 | 280 | 1 | 282 | 9.75e-151 | 437 |
| MS.gene055749.t1 | MTR_4g088515 | 55.349 | 430 | 104 | 7 | 9 | 436 | 276 | 619 | 1.73e-144 | 434 |
| MS.gene055749.t1 | MTR_6g033810 | 59.337 | 332 | 85 | 2 | 86 | 415 | 8 | 291 | 1.65e-127 | 378 |
| MS.gene055749.t1 | MTR_7g026050 | 51.604 | 374 | 152 | 3 | 243 | 615 | 1 | 346 | 1.76e-124 | 373 |
| MS.gene055749.t1 | MTR_7g026080 | 70.732 | 246 | 70 | 1 | 1 | 244 | 1 | 246 | 2.03e-122 | 364 |
| MS.gene055749.t1 | MTR_6g033855 | 52.231 | 381 | 94 | 4 | 86 | 464 | 8 | 302 | 3.84e-121 | 363 |
| MS.gene055749.t1 | MTR_2g040355 | 46.552 | 464 | 82 | 11 | 187 | 647 | 2 | 302 | 7.91e-106 | 323 |
| MS.gene055749.t1 | MTR_2g031670 | 67.111 | 225 | 72 | 1 | 21 | 243 | 43 | 267 | 2.18e-105 | 323 |
| MS.gene055749.t1 | MTR_2g031670 | 74.627 | 67 | 16 | 1 | 342 | 408 | 275 | 340 | 1.98e-21 | 96.7 |
| MS.gene055749.t1 | MTR_1g077240 | 53.872 | 297 | 127 | 4 | 320 | 615 | 1 | 288 | 1.94e-86 | 272 |
| MS.gene055749.t1 | MTR_5g006180 | 34.990 | 503 | 286 | 11 | 9 | 494 | 29 | 507 | 1.98e-86 | 281 |
| MS.gene055749.t1 | MTR_1207s0010 | 71.023 | 176 | 50 | 1 | 106 | 281 | 1 | 175 | 1.33e-82 | 258 |
| MS.gene055749.t1 | MTR_2g102180 | 33.406 | 461 | 289 | 5 | 10 | 457 | 4 | 459 | 1.97e-82 | 278 |
| MS.gene055749.t1 | MTR_4g012050 | 34.475 | 438 | 271 | 4 | 10 | 434 | 4 | 438 | 1.52e-81 | 275 |
| MS.gene055749.t1 | MTR_5g097190 | 53.360 | 253 | 69 | 4 | 4 | 254 | 153 | 358 | 5.01e-78 | 253 |
| MS.gene055749.t1 | MTR_6g478100 | 60.377 | 212 | 70 | 2 | 36 | 247 | 10 | 207 | 1.75e-77 | 250 |
| MS.gene055749.t1 | MTR_5g092570 | 34.426 | 427 | 271 | 4 | 10 | 430 | 4 | 427 | 4.84e-76 | 259 |
| MS.gene055749.t1 | MTR_3g051300 | 33.810 | 420 | 273 | 4 | 10 | 428 | 4 | 419 | 2.61e-75 | 257 |
| MS.gene055749.t1 | MTR_5g090110 | 33.469 | 493 | 275 | 13 | 9 | 482 | 28 | 486 | 2.12e-71 | 240 |
| MS.gene055749.t1 | MTR_5g005870 | 42.378 | 328 | 173 | 5 | 265 | 587 | 35 | 351 | 4.29e-69 | 231 |
| MS.gene055749.t1 | MTR_4g107920 | 32.143 | 504 | 307 | 14 | 10 | 496 | 21 | 506 | 5.28e-67 | 229 |
| MS.gene055749.t1 | MTR_4g115780 | 33.984 | 512 | 306 | 11 | 9 | 496 | 140 | 643 | 7.59e-67 | 232 |
| MS.gene055749.t1 | MTR_3g081170 | 26.748 | 572 | 374 | 12 | 10 | 544 | 27 | 590 | 1.20e-58 | 212 |
| MS.gene055749.t1 | MTR_6g033910 | 46.639 | 238 | 64 | 4 | 65 | 300 | 12 | 188 | 1.63e-57 | 192 |
| MS.gene055749.t1 | MTR_7g074540 | 48.259 | 201 | 103 | 1 | 416 | 616 | 1 | 200 | 1.91e-53 | 182 |
| MS.gene055749.t1 | MTR_1g116250 | 43.636 | 275 | 112 | 5 | 342 | 615 | 56 | 288 | 4.87e-53 | 184 |
| MS.gene055749.t1 | MTR_7g026180 | 73.950 | 119 | 31 | 0 | 74 | 192 | 21 | 139 | 1.57e-51 | 181 |
| MS.gene055749.t1 | MTR_7g026180 | 33.641 | 217 | 111 | 4 | 401 | 615 | 144 | 329 | 6.32e-25 | 106 |
| MS.gene055749.t1 | MTR_2g017710 | 43.077 | 260 | 63 | 6 | 223 | 480 | 17 | 193 | 4.79e-48 | 170 |
| MS.gene055749.t1 | MTR_7g451390 | 48.087 | 183 | 93 | 2 | 436 | 617 | 10 | 191 | 2.96e-46 | 162 |
| MS.gene055749.t1 | MTR_5g005890 | 39.207 | 227 | 87 | 4 | 72 | 297 | 5 | 181 | 1.72e-43 | 154 |
| MS.gene055749.t1 | MTR_1g068900 | 52.518 | 139 | 58 | 4 | 426 | 560 | 23 | 157 | 3.86e-35 | 131 |
| MS.gene055749.t1 | MTR_6g033805 | 76.056 | 71 | 17 | 0 | 1 | 71 | 1 | 71 | 4.95e-32 | 119 |
| MS.gene055749.t1 | MTR_4g027235 | 73.333 | 75 | 18 | 1 | 1 | 73 | 1 | 75 | 4.77e-30 | 113 |
| MS.gene055749.t1 | MTR_4g027085 | 73.333 | 75 | 18 | 1 | 1 | 73 | 1 | 75 | 4.77e-30 | 113 |
| MS.gene055749.t1 | MTR_7g026190 | 57.447 | 94 | 31 | 2 | 286 | 379 | 9 | 93 | 7.20e-28 | 112 |
| MS.gene055749.t1 | MTR_7g026190 | 37.815 | 119 | 71 | 2 | 498 | 616 | 94 | 209 | 6.08e-14 | 71.6 |
| MS.gene055749.t1 | MTR_2g040375 | 76.667 | 60 | 14 | 0 | 398 | 457 | 51 | 110 | 5.70e-23 | 94.7 |
| MS.gene055749.t1 | MTR_4g115860 | 46.739 | 92 | 49 | 0 | 396 | 487 | 29 | 120 | 2.51e-22 | 93.2 |
| MS.gene055749.t1 | MTR_6g033815 | 52.113 | 71 | 34 | 0 | 524 | 594 | 1 | 71 | 2.24e-19 | 84.3 |
| MS.gene055749.t1 | MTR_7g021430 | 52.000 | 75 | 36 | 0 | 213 | 287 | 1 | 75 | 1.97e-18 | 84.3 |
| MS.gene055749.t1 | MTR_7g026095 | 46.739 | 92 | 49 | 0 | 482 | 573 | 256 | 347 | 2.16e-18 | 87.4 |
| MS.gene055749.t1 | MTR_7g026095 | 63.492 | 63 | 22 | 1 | 86 | 148 | 189 | 250 | 5.77e-17 | 83.2 |
| MS.gene055749.t1 | MTR_7g026160 | 38.333 | 120 | 48 | 4 | 296 | 389 | 72 | 191 | 1.72e-12 | 68.2 |
| MS.gene055749.t1 | MTR_6g033995 | 54.839 | 62 | 20 | 2 | 1 | 60 | 1 | 56 | 5.86e-11 | 58.9 |
| MS.gene055749.t1 | MTR_4g115785 | 44.615 | 65 | 36 | 0 | 440 | 504 | 7 | 71 | 8.49e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055749.t1 | AT3G12580 | 92.320 | 651 | 47 | 2 | 1 | 649 | 1 | 650 | 0.0 | 1221 |
| MS.gene055749.t1 | AT5G02500 | 90.658 | 653 | 55 | 2 | 1 | 649 | 1 | 651 | 0.0 | 1213 |
| MS.gene055749.t1 | AT3G09440 | 90.783 | 651 | 56 | 2 | 1 | 649 | 1 | 649 | 0.0 | 1202 |
| MS.gene055749.t1 | AT3G09440 | 90.783 | 651 | 56 | 2 | 1 | 649 | 1 | 649 | 0.0 | 1202 |
| MS.gene055749.t1 | AT3G09440 | 90.783 | 651 | 56 | 2 | 1 | 649 | 1 | 649 | 0.0 | 1202 |
| MS.gene055749.t1 | AT3G09440 | 90.783 | 651 | 56 | 2 | 1 | 649 | 1 | 649 | 0.0 | 1202 |
| MS.gene055749.t1 | AT5G02490 | 89.297 | 654 | 64 | 2 | 1 | 649 | 1 | 653 | 0.0 | 1196 |
| MS.gene055749.t1 | AT1G16030 | 84.746 | 649 | 96 | 2 | 1 | 649 | 1 | 646 | 0.0 | 1137 |
| MS.gene055749.t1 | AT1G56410 | 87.399 | 619 | 76 | 1 | 1 | 619 | 1 | 617 | 0.0 | 1122 |
| MS.gene055749.t1 | AT5G42020 | 64.895 | 621 | 212 | 4 | 7 | 625 | 35 | 651 | 0.0 | 827 |
| MS.gene055749.t1 | AT5G42020 | 64.895 | 621 | 212 | 4 | 7 | 625 | 40 | 656 | 0.0 | 826 |
| MS.gene055749.t1 | AT5G28540 | 65.472 | 614 | 206 | 4 | 7 | 618 | 35 | 644 | 0.0 | 825 |
| MS.gene055749.t1 | AT1G09080 | 62.806 | 613 | 223 | 3 | 7 | 618 | 50 | 658 | 0.0 | 782 |
| MS.gene055749.t1 | AT1G09080 | 62.806 | 613 | 223 | 3 | 7 | 618 | 40 | 648 | 0.0 | 782 |
| MS.gene055749.t1 | AT5G02500 | 92.893 | 394 | 28 | 0 | 1 | 394 | 1 | 394 | 0.0 | 771 |
| MS.gene055749.t1 | AT5G02500 | 76.087 | 138 | 27 | 2 | 516 | 649 | 386 | 521 | 5.76e-54 | 193 |
| MS.gene055749.t1 | AT5G42020 | 58.615 | 621 | 196 | 9 | 7 | 625 | 35 | 596 | 0.0 | 695 |
| MS.gene055749.t1 | AT5G09590 | 51.858 | 592 | 259 | 9 | 10 | 594 | 60 | 632 | 0.0 | 560 |
| MS.gene055749.t1 | AT4G24280 | 49.251 | 601 | 281 | 10 | 10 | 605 | 81 | 662 | 0.0 | 538 |
| MS.gene055749.t1 | AT5G49910 | 48.315 | 623 | 295 | 11 | 10 | 624 | 81 | 684 | 0.0 | 535 |
| MS.gene055749.t1 | AT4G37910 | 52.076 | 578 | 251 | 9 | 10 | 580 | 55 | 613 | 0.0 | 531 |
| MS.gene055749.t1 | AT4G37910 | 52.076 | 578 | 251 | 9 | 10 | 580 | 55 | 613 | 0.0 | 531 |
| MS.gene055749.t1 | AT2G32120 | 34.180 | 512 | 309 | 9 | 9 | 508 | 30 | 525 | 1.54e-87 | 284 |
| MS.gene055749.t1 | AT2G32120 | 34.180 | 512 | 309 | 9 | 9 | 508 | 30 | 525 | 1.54e-87 | 284 |
| MS.gene055749.t1 | AT1G79930 | 35.388 | 438 | 267 | 4 | 10 | 434 | 4 | 438 | 2.93e-86 | 286 |
| MS.gene055749.t1 | AT1G79930 | 35.388 | 438 | 267 | 4 | 10 | 434 | 4 | 438 | 3.92e-86 | 287 |
| MS.gene055749.t1 | AT1G79920 | 35.388 | 438 | 267 | 4 | 10 | 434 | 4 | 438 | 4.97e-85 | 282 |
| MS.gene055749.t1 | AT1G79920 | 35.388 | 438 | 267 | 4 | 10 | 434 | 4 | 438 | 7.14e-85 | 281 |
| MS.gene055749.t1 | AT1G79920 | 35.388 | 438 | 267 | 4 | 10 | 434 | 4 | 438 | 7.14e-85 | 281 |
| MS.gene055749.t1 | AT1G79920 | 35.388 | 438 | 267 | 4 | 10 | 434 | 4 | 438 | 7.14e-85 | 281 |
| MS.gene055749.t1 | AT1G11660 | 27.515 | 676 | 401 | 12 | 10 | 619 | 4 | 656 | 6.05e-84 | 280 |
| MS.gene055749.t1 | AT1G11660 | 27.515 | 676 | 401 | 12 | 10 | 619 | 4 | 656 | 6.05e-84 | 280 |
| MS.gene055749.t1 | AT1G11660 | 27.515 | 676 | 401 | 12 | 10 | 619 | 4 | 656 | 6.05e-84 | 280 |
| MS.gene055749.t1 | AT1G11660 | 27.613 | 641 | 375 | 12 | 45 | 619 | 2 | 619 | 1.08e-75 | 257 |
| MS.gene055749.t1 | AT4G16660 | 25.487 | 718 | 423 | 16 | 5 | 615 | 46 | 758 | 1.83e-62 | 223 |
| MS.gene055749.t1 | AT4G16660 | 25.766 | 718 | 421 | 17 | 5 | 615 | 22 | 734 | 2.81e-61 | 219 |
Find 171 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGATGCCGGTGTCATTTC+TGG | 0.156592 | 4.4:-42344825 | MS.gene055749:CDS |
| CATCTTCTCAATTTCCTCTT+TGG | 0.183600 | 4.4:+42343762 | None:intergenic |
| GTAGGAATGGTTGTATTTCT+TGG | 0.241876 | 4.4:+42344051 | None:intergenic |
| TCTTGAATTCTTGAACAAAA+TGG | 0.242578 | 4.4:+42344577 | None:intergenic |
| AGCCTGTGGAGAAGTGTTTA+AGG | 0.261872 | 4.4:-42344350 | MS.gene055749:CDS |
| CCCGATGAGGCCGTTGCTTA+TGG | 0.306294 | 4.4:-42344201 | MS.gene055749:CDS |
| CCAACCTGGTGTGCTGATTC+AGG | 0.309133 | 4.4:-42343992 | MS.gene055749:CDS |
| TCAGATGCTAAGCGATTAAT+TGG | 0.310966 | 4.4:-42345101 | MS.gene055749:intron |
| TACTCCTCTCTCCCTTGGTT+TGG | 0.315513 | 4.4:-42344106 | MS.gene055749:CDS |
| TTAATCAACTTCCTCAATCT+TGG | 0.333860 | 4.4:+42343384 | None:intergenic |
| TGAAAACACCTGCTCCTTCT+TGG | 0.336551 | 4.4:+42344029 | None:intergenic |
| ACCTGCGATTGGAATCGATT+TGG | 0.340588 | 4.4:-42345933 | MS.gene055749:CDS |
| TGGCCGTTCAAGGTCATTCC+TGG | 0.343735 | 4.4:-42345035 | MS.gene055749:CDS |
| GCTGGCAGTGGAAGCGGTGC+TGG | 0.344996 | 4.4:-42343409 | MS.gene055749:CDS |
| CCTGCGATTGGAATCGATTT+GGG | 0.346174 | 4.4:-42345932 | MS.gene055749:CDS |
| GTTGGGCAAATTTGAGTTAT+CGG | 0.350084 | 4.4:-42343929 | MS.gene055749:CDS |
| TGCAAAAGTTGTTGAACCTT+GGG | 0.350273 | 4.4:+42344264 | None:intergenic |
| CCATAAGCAACGGCCTCATC+GGG | 0.354078 | 4.4:+42344201 | None:intergenic |
| TACTGCTGGTGATACACATT+TGG | 0.354173 | 4.4:-42344631 | MS.gene055749:CDS |
| TGATACATCCTAGCAATGAT+AGG | 0.362378 | 4.4:+42343481 | None:intergenic |
| AGCTCAATATGGATTTGTTT+AGG | 0.363242 | 4.4:-42344383 | MS.gene055749:CDS |
| GTACATGATGTTGTTCTTGT+TGG | 0.372027 | 4.4:-42344303 | MS.gene055749:CDS |
| TTATAGTTCACCACAATCAT+AGG | 0.383446 | 4.4:+42344999 | None:intergenic |
| CATATTCATGTGTTGGTGTT+TGG | 0.389658 | 4.4:-42345904 | MS.gene055749:CDS |
| GGATTTGTTTAGGAAGTGTA+TGG | 0.401845 | 4.4:-42344373 | MS.gene055749:CDS |
| TTACCGAAAACAGTGTTAGT+AGG | 0.404952 | 4.4:+42345758 | None:intergenic |
| CCTGCTGCTGGCAGTGGAAG+CGG | 0.405341 | 4.4:-42343415 | MS.gene055749:CDS |
| GATGTTACTCCTCTCTCCCT+TGG | 0.408263 | 4.4:-42344111 | MS.gene055749:CDS |
| CTCAATCTTCTAAGAGCCCT+TGG | 0.408771 | 4.4:+42344525 | None:intergenic |
| CAAGGTGCTGGTGGTGATGC+TGG | 0.412390 | 4.4:-42343460 | MS.gene055749:CDS |
| CATGAAATTGTGGCCGTTCA+AGG | 0.412524 | 4.4:-42345045 | MS.gene055749:CDS |
| CATGATGTTGTTCTTGTTGG+TGG | 0.420045 | 4.4:-42344300 | MS.gene055749:CDS |
| GAGATTGCAGAGGCTTATCT+TGG | 0.422742 | 4.4:-42344915 | MS.gene055749:CDS |
| TGAAATTGATTCATTGTTTG+AGG | 0.423673 | 4.4:-42344448 | MS.gene055749:CDS |
| GGAAAGCCTACCCTTGTCAT+TGG | 0.428458 | 4.4:+42343783 | None:intergenic |
| TGAAATCATAGCAAATGATC+AGG | 0.428560 | 4.4:-42345867 | MS.gene055749:CDS |
| GACTCGTGATAACAATTTGT+TGG | 0.428667 | 4.4:-42343947 | MS.gene055749:CDS |
| CAAAGAGGAAATTGAGAAGA+TGG | 0.433532 | 4.4:-42343761 | MS.gene055749:CDS |
| TAGGAGAATCAGCGATGTTT+CGG | 0.437308 | 4.4:-42345078 | MS.gene055749:CDS |
| TTGGGCAAATTTGAGTTATC+GGG | 0.440252 | 4.4:-42343928 | MS.gene055749:CDS |
| TTGCAAAAGTTGTTGAACCT+TGG | 0.441982 | 4.4:+42344263 | None:intergenic |
| TAATCAACTTCCTCAATCTT+GGG | 0.446332 | 4.4:+42343385 | None:intergenic |
| TGGAGAGGCTGATGAATTTG+AGG | 0.450186 | 4.4:-42343536 | MS.gene055749:CDS |
| TCCCTTGGTTTGGAGACTGC+AGG | 0.450627 | 4.4:-42344096 | MS.gene055749:CDS |
| ATTTGTTGAGAGATTATGGC+TGG | 0.452082 | 4.4:-42345968 | None:intergenic |
| GACAAGAAGGCTACAAGTAC+TGG | 0.452597 | 4.4:-42344744 | MS.gene055749:CDS |
| CTGCTCCTTCTTGGTAGGAA+TGG | 0.452909 | 4.4:+42344038 | None:intergenic |
| GGGTATCCCTCCTGCTCCAA+GGG | 0.454460 | 4.4:-42343908 | MS.gene055749:CDS |
| ACTGCTGGTGATACACATTT+GGG | 0.462462 | 4.4:-42344630 | MS.gene055749:CDS |
| GATGGTCCTGCTGCTGGCAG+TGG | 0.462691 | 4.4:-42343421 | MS.gene055749:CDS |
| TTATGTTGCTTTCACTGATA+CGG | 0.463481 | 4.4:-42345825 | MS.gene055749:CDS |
| ACTGCCGCTGCTATTGCCTA+TGG | 0.464087 | 4.4:-42344771 | MS.gene055749:CDS |
| CATGGTTCTTATGAAGATGA+AGG | 0.464118 | 4.4:-42344937 | MS.gene055749:CDS |
| GATGAAGATGGTCCTGCTGC+TGG | 0.465181 | 4.4:-42343427 | MS.gene055749:CDS |
| AGTACAGGATCTGTTGTTGC+TGG | 0.469670 | 4.4:-42344133 | MS.gene055749:CDS |
| GCCATAAGCAACGGCCTCAT+CGG | 0.470526 | 4.4:+42344200 | None:intergenic |
| ACTCGTGATAACAATTTGTT+GGG | 0.474189 | 4.4:-42343946 | MS.gene055749:CDS |
| GTGTTTAAGGGATGCTAAGA+TGG | 0.480423 | 4.4:-42344337 | MS.gene055749:CDS |
| GAAAATTGAAGATGCTATTG+AGG | 0.480599 | 4.4:-42343590 | MS.gene055749:CDS |
| CAATGAATCAATTTCAATGG+TGG | 0.482628 | 4.4:+42344455 | None:intergenic |
| CGGGTATCCCTCCTGCTCCA+AGG | 0.485376 | 4.4:-42343909 | MS.gene055749:CDS |
| ATAGGCAATAGCAGCGGCAG+TGG | 0.488775 | 4.4:+42344773 | None:intergenic |
| CCGCTTCCACTGCCAGCAGC+AGG | 0.490175 | 4.4:+42343415 | None:intergenic |
| TATTGAGGAAGGTATCTTTG+AGG | 0.490881 | 4.4:-42344661 | MS.gene055749:CDS |
| GCAAGATTTCTTCAATGGAA+AGG | 0.494283 | 4.4:-42344244 | MS.gene055749:CDS |
| TGTTTCACTTCTTACTATTG+AGG | 0.495641 | 4.4:-42344676 | MS.gene055749:CDS |
| AAACAATGAATCAATTTCAA+TGG | 0.497295 | 4.4:+42344452 | None:intergenic |
| ATTCAAGAGGAAGAATAAGA+AGG | 0.502948 | 4.4:-42344562 | MS.gene055749:CDS |
| ACTGATACGGAACGTTTGAT+CGG | 0.504694 | 4.4:-42345812 | MS.gene055749:CDS |
| GAAATTGATTCATTGTTTGA+GGG | 0.510562 | 4.4:-42344447 | MS.gene055749:CDS |
| TGCCTATGGTCTTGACAAGA+AGG | 0.512155 | 4.4:-42344757 | MS.gene055749:CDS |
| TGCTGAAGAGATATCTTCCA+TGG | 0.512232 | 4.4:-42344955 | MS.gene055749:CDS |
| TGAGGAACACCCCTTGGAGC+AGG | 0.513433 | 4.4:+42343898 | None:intergenic |
| CTGCTTGTGAGAGAGCTAAG+AGG | 0.514038 | 4.4:-42344500 | MS.gene055749:CDS |
| TACCGAAAACAGTGTTAGTA+GGG | 0.517002 | 4.4:+42345759 | None:intergenic |
| AAGAATAAGAAGGATATTAG+CGG | 0.517633 | 4.4:-42344552 | MS.gene055749:CDS |
| ATAGGTTTGTCAGCAGGGCC+AGG | 0.524557 | 4.4:+42345017 | None:intergenic |
| GGAAATTGAGAAGATGGTGC+AGG | 0.525352 | 4.4:-42343755 | MS.gene055749:CDS |
| ATGCTAAGCGATTAATTGGT+AGG | 0.528922 | 4.4:-42345097 | MS.gene055749:CDS |
| AAAATTGAAGATGCTATTGA+GGG | 0.529908 | 4.4:-42343589 | MS.gene055749:CDS |
| CGGTGCTGGTCCCAAGATTG+AGG | 0.530030 | 4.4:-42343395 | MS.gene055749:CDS |
| TGCTTTGACATTGATGCCAA+TGG | 0.530676 | 4.4:-42343865 | MS.gene055749:CDS |
| TGAGGACAAGATGAAGGAGC+TGG | 0.532976 | 4.4:-42343518 | MS.gene055749:CDS |
| GGGCCAGGAATGACCTTGAA+CGG | 0.539439 | 4.4:+42345032 | None:intergenic |
| AAAGGTGAAGGACCTGCGAT+TGG | 0.542152 | 4.4:-42345944 | MS.gene055749:CDS |
| CAATCATAGGTTTGTCAGCA+GGG | 0.542843 | 4.4:+42345012 | None:intergenic |
| TCAGTGAAAGCAACATAAGA+AGG | 0.544801 | 4.4:+42345830 | None:intergenic |
| TGTGAATCGTTGAAGTATGC+AGG | 0.545254 | 4.4:+42344861 | None:intergenic |
| AGGATATTAGCGGAAATCCA+AGG | 0.545644 | 4.4:-42344542 | MS.gene055749:CDS |
| ACAATCATAGGTTTGTCAGC+AGG | 0.547735 | 4.4:+42345011 | None:intergenic |
| CCCAAATCGATTCCAATCGC+AGG | 0.548277 | 4.4:+42345932 | None:intergenic |
| GCCTGTGGAGAAGTGTTTAA+GGG | 0.550982 | 4.4:-42344349 | MS.gene055749:CDS |
| AATGGTGGTTTGAGCAGTAG+AGG | 0.553384 | 4.4:+42344470 | None:intergenic |
| TGAGAGATTATGGCTGGAAA+AGG | 0.553396 | 4.4:-42345962 | None:intergenic |
| TCAGCAGAGGACAAGACCAC+AGG | 0.553510 | 4.4:-42343829 | MS.gene055749:CDS |
| GGGGCTATTCAATGGTTGGA+TGG | 0.553727 | 4.4:-42343568 | MS.gene055749:CDS |
| GGTTTGAGCAGTAGAGGAAA+GGG | 0.553832 | 4.4:+42344476 | None:intergenic |
| TTTGCAACCCTATCATTGCT+AGG | 0.554597 | 4.4:-42343489 | MS.gene055749:CDS |
| CTTGGTTTGGAGACTGCAGG+AGG | 0.554875 | 4.4:-42344093 | MS.gene055749:CDS |
| ATCATTGCTAGGATGTATCA+AGG | 0.555326 | 4.4:-42343478 | MS.gene055749:CDS |
| CACCACTCAAAATAGCAGCT+TGG | 0.555458 | 4.4:+42344169 | None:intergenic |
| TGGTGATGCTGGAGGAGCCA+TGG | 0.557888 | 4.4:-42343449 | MS.gene055749:CDS |
| GTGATCTGAGGAACACCCCT+TGG | 0.562871 | 4.4:+42343892 | None:intergenic |
| TCCCTTAAACACTTCTCCAC+AGG | 0.563569 | 4.4:+42344348 | None:intergenic |
| GTCTCCAAACCAAGGGAGAG+AGG | 0.567259 | 4.4:+42344102 | None:intergenic |
| GGAACAACATATTCATGTGT+TGG | 0.568612 | 4.4:-42345911 | MS.gene055749:CDS |
| GGAACACCCCTTGGAGCAGG+AGG | 0.568941 | 4.4:+42343901 | None:intergenic |
| GATACATCCTAGCAATGATA+GGG | 0.569465 | 4.4:+42343482 | None:intergenic |
| TAGGCAATAGCAGCGGCAGT+GGG | 0.574624 | 4.4:+42344774 | None:intergenic |
| AGCAGGACCATCTTCATCCA+TGG | 0.574951 | 4.4:+42343432 | None:intergenic |
| TGAATTTGAGGACAAGATGA+AGG | 0.575031 | 4.4:-42343524 | MS.gene055749:CDS |
| GCTAGGATGTATCAAGGTGC+TGG | 0.576167 | 4.4:-42343472 | MS.gene055749:CDS |
| TACAACCATTCCTACCAAGA+AGG | 0.576375 | 4.4:-42344043 | MS.gene055749:CDS |
| AAAGTACAAGTCTGAGGACG+AGG | 0.578393 | 4.4:-42343725 | MS.gene055749:CDS |
| CTTCATCTTCATAAGAACCA+TGG | 0.578877 | 4.4:+42344938 | None:intergenic |
| TGGTTTGAGCAGTAGAGGAA+AGG | 0.580792 | 4.4:+42344475 | None:intergenic |
| GACTGCAGCGCCATAAGCAA+CGG | 0.581958 | 4.4:+42344191 | None:intergenic |
| CATTCCTACCAAGAAGGAGC+AGG | 0.582400 | 4.4:-42344037 | MS.gene055749:CDS |
| TCACTTCTTACTATTGAGGA+AGG | 0.584344 | 4.4:-42344672 | MS.gene055749:CDS |
| TTCTTGTTGGTGGATCGACT+AGG | 0.585926 | 4.4:-42344290 | MS.gene055749:CDS |
| TTTCTGGACTCAATGTGTTG+AGG | 0.587988 | 4.4:-42344809 | MS.gene055749:CDS |
| CAATCACCAATGACAAGGGT+AGG | 0.589395 | 4.4:-42343789 | MS.gene055749:CDS |
| TAGTAGGGTTCATAGCAACT+TGG | 0.589835 | 4.4:+42345774 | None:intergenic |
| TGAGACATTCAGAATACCAT+TGG | 0.592336 | 4.4:+42343849 | None:intergenic |
| AAAACTATGCATACAACATG+AGG | 0.597334 | 4.4:-42343666 | MS.gene055749:CDS |
| CAGCAGAGGACAAGACCACA+GGG | 0.598328 | 4.4:-42343828 | MS.gene055749:CDS |
| AGCCTTCTTGTCAAGACCAT+AGG | 0.599068 | 4.4:+42344755 | None:intergenic |
| TGAGGGCAATGAGAAAGTAC+AGG | 0.599255 | 4.4:-42344148 | MS.gene055749:CDS |
| CTCCTGCAGTCTCCAAACCA+AGG | 0.604106 | 4.4:+42344094 | None:intergenic |
| GAAATCATAGCAAATGATCA+GGG | 0.604960 | 4.4:-42345866 | MS.gene055749:CDS |
| TGGTTGGATGGAAATCAACT+TGG | 0.605882 | 4.4:-42343556 | MS.gene055749:CDS |
| TAGACCTGAATCAGCACACC+AGG | 0.606163 | 4.4:+42343988 | None:intergenic |
| CAAGGGTAGGCTTTCCAAAG+AGG | 0.607535 | 4.4:-42343776 | MS.gene055749:CDS |
| TCCTGCAGTCTCCAAACCAA+GGG | 0.609877 | 4.4:+42344095 | None:intergenic |
| TTTGAGGTGAAAGCTACTGC+TGG | 0.609989 | 4.4:-42344645 | MS.gene055749:CDS |
| GGATATTAGCGGAAATCCAA+GGG | 0.611329 | 4.4:-42344541 | MS.gene055749:CDS |
| ACCAGGTTGGTTATCAGAGT+AGG | 0.621601 | 4.4:+42344005 | None:intergenic |
| GACAAGATGAAGGAGCTGGA+GGG | 0.622357 | 4.4:-42343514 | MS.gene055749:CDS |
| TACAGAGTGACATGAAATTG+TGG | 0.624043 | 4.4:-42345055 | MS.gene055749:CDS |
| CGTCAAGCTACAAAGGATGC+CGG | 0.624953 | 4.4:-42344837 | MS.gene055749:CDS |
| TTCACAACGTCAAGCTACAA+AGG | 0.626174 | 4.4:-42344844 | MS.gene055749:CDS |
| ATTATGGCTGGAAAAGGTGA+AGG | 0.630083 | 4.4:-42345956 | MS.gene055749:CDS |
| GGATGGAAATCAACTTGGAG+AGG | 0.632319 | 4.4:-42343551 | MS.gene055749:CDS |
| TGCTGACAAACCTATGATTG+TGG | 0.632591 | 4.4:-42345009 | MS.gene055749:CDS |
| GGAGGAGCCATGGATGAAGA+TGG | 0.633207 | 4.4:-42343439 | MS.gene055749:CDS |
| AACACCTGCTCCTTCTTGGT+AGG | 0.634088 | 4.4:+42344033 | None:intergenic |
| CCTGAATCAGCACACCAGGT+TGG | 0.637157 | 4.4:+42343992 | None:intergenic |
| GGACAAGATGAAGGAGCTGG+AGG | 0.638733 | 4.4:-42343515 | MS.gene055749:CDS |
| ACCTACTCTGATAACCAACC+TGG | 0.640169 | 4.4:-42344006 | MS.gene055749:CDS |
| TCAAAGCAAACAGTGATCTG+AGG | 0.640283 | 4.4:+42343880 | None:intergenic |
| GAAGATGAAGGAGATTGCAG+AGG | 0.642514 | 4.4:-42344925 | MS.gene055749:CDS |
| GATTACAATCACCAATGACA+AGG | 0.645567 | 4.4:-42343794 | MS.gene055749:CDS |
| GGTGCTGGTGGTGATGCTGG+AGG | 0.646421 | 4.4:-42343457 | MS.gene055749:CDS |
| AGGATGTATCAAGGTGCTGG+TGG | 0.649243 | 4.4:-42343469 | MS.gene055749:CDS |
| AATTGAAGATGCTATTGAGG+GGG | 0.652473 | 4.4:-42343587 | MS.gene055749:CDS |
| TGCTGAAAAGTACAAGTCTG+AGG | 0.657032 | 4.4:-42343731 | MS.gene055749:CDS |
| TGGATCGACTAGGATTCCCA+AGG | 0.664968 | 4.4:-42344280 | MS.gene055749:CDS |
| TCTACGAAGGAGAAAGAACA+AGG | 0.674145 | 4.4:-42343969 | MS.gene055749:CDS |
| GTGCTGATTCAGGTCTACGA+AGG | 0.676079 | 4.4:-42343982 | MS.gene055749:CDS |
| TAGGAAGTGTATGGAGCCTG+TGG | 0.676933 | 4.4:-42344364 | MS.gene055749:CDS |
| TATTCTGAATGTCTCAGCAG+AGG | 0.680755 | 4.4:-42343842 | MS.gene055749:CDS |
| ATTACAATCACCAATGACAA+GGG | 0.682522 | 4.4:-42343793 | MS.gene055749:CDS |
| TAAGAGCATCAACCCCGATG+AGG | 0.683625 | 4.4:-42344214 | MS.gene055749:CDS |
| GAACACCCCTTGGAGCAGGA+GGG | 0.684051 | 4.4:+42343902 | None:intergenic |
| AAATTGAAGATGCTATTGAG+GGG | 0.691800 | 4.4:-42343588 | MS.gene055749:CDS |
| GGTATCCCTCCTGCTCCAAG+GGG | 0.692385 | 4.4:-42343907 | MS.gene055749:CDS |
| TGTGGTGAACTATAAAGCTG+AGG | 0.717089 | 4.4:-42344991 | MS.gene055749:CDS |
| ATTGAGTCCAGAAATGACAC+CGG | 0.717355 | 4.4:+42344818 | None:intergenic |
| CATAAGCAACGGCCTCATCG+GGG | 0.723058 | 4.4:+42344202 | None:intergenic |
| AAGACCATAGGCAATAGCAG+CGG | 0.731023 | 4.4:+42344767 | None:intergenic |
| GCTGGTGATACACATTTGGG+AGG | 0.733697 | 4.4:-42344627 | MS.gene055749:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTAAAAAAAACAGATTAA+TGG | + | chr4.4:42343812-42343831 | None:intergenic | 10.0% |
| !! | TTGTACATATACATAATTAT+AGG | - | chr4.4:42344026-42344045 | MS.gene055749:CDS | 15.0% |
| !! | AAACAATGAATCAATTTCAA+TGG | + | chr4.4:42344888-42344907 | None:intergenic | 20.0% |
| !! | AAAGTATAAAAGGTAGAAAA+GGG | - | chr4.4:42343871-42343890 | MS.gene055749:CDS | 20.0% |
| !! | CTGAAAAAGAATAAAAACTT+CGG | + | chr4.4:42343639-42343658 | None:intergenic | 20.0% |
| !!! | AAAAGTATAAAAGGTAGAAA+AGG | - | chr4.4:42343870-42343889 | MS.gene055749:CDS | 20.0% |
| !!! | ATAAGGTAGAAAAGTATAAA+AGG | - | chr4.4:42343861-42343880 | MS.gene055749:CDS | 20.0% |
| ! | AAAATTGAAGATGCTATTGA+GGG | - | chr4.4:42345748-42345767 | MS.gene055749:intron | 25.0% |
| ! | AAGAATAAGAAGGATATTAG+CGG | - | chr4.4:42344785-42344804 | MS.gene055749:CDS | 25.0% |
| ! | TCTTGAATTCTTGAACAAAA+TGG | + | chr4.4:42344763-42344782 | None:intergenic | 25.0% |
| !! | ATTTTGTTCAAGAATTCAAG+AGG | - | chr4.4:42344762-42344781 | MS.gene055749:CDS | 25.0% |
| !! | GAAATTGATTCATTGTTTGA+GGG | - | chr4.4:42344890-42344909 | MS.gene055749:CDS | 25.0% |
| !! | TGAAATTGATTCATTGTTTG+AGG | - | chr4.4:42344889-42344908 | MS.gene055749:CDS | 25.0% |
| !!! | AATGTTCTTATTTTCGATCT+TGG | - | chr4.4:42344623-42344642 | MS.gene055749:CDS | 25.0% |
| AAAACTATGCATACAACATG+AGG | - | chr4.4:42345671-42345690 | MS.gene055749:intron | 30.0% | |
| AAATTGAAGATGCTATTGAG+GGG | - | chr4.4:42345749-42345768 | MS.gene055749:intron | 30.0% | |
| ATAAAAACTTCGGAAGACTA+AGG | + | chr4.4:42343629-42343648 | None:intergenic | 30.0% | |
| ATTACAATCACCAATGACAA+GGG | - | chr4.4:42345544-42345563 | MS.gene055749:intron | 30.0% | |
| ATTCAAGAGGAAGAATAAGA+AGG | - | chr4.4:42344775-42344794 | MS.gene055749:CDS | 30.0% | |
| CAATGAATCAATTTCAATGG+TGG | + | chr4.4:42344885-42344904 | None:intergenic | 30.0% | |
| CAGAGCATAATAGTAGAAAA+GGG | - | chr4.4:42344140-42344159 | MS.gene055749:CDS | 30.0% | |
| GAAAATTGAAGATGCTATTG+AGG | - | chr4.4:42345747-42345766 | MS.gene055749:intron | 30.0% | |
| GAAATCATAGCAAATGATCA+GGG | - | chr4.4:42343471-42343490 | MS.gene055749:CDS | 30.0% | |
| GTTTCAGTATTTGTCAAGAA+TGG | - | chr4.4:42344172-42344191 | MS.gene055749:CDS | 30.0% | |
| TAATCAACTTCCTCAATCTT+GGG | + | chr4.4:42345955-42345974 | None:intergenic | 30.0% | |
| TCAGAGCATAATAGTAGAAA+AGG | - | chr4.4:42344139-42344158 | MS.gene055749:CDS | 30.0% | |
| TGAAATCATAGCAAATGATC+AGG | - | chr4.4:42343470-42343489 | MS.gene055749:CDS | 30.0% | |
| TGTTTCACTTCTTACTATTG+AGG | - | chr4.4:42344661-42344680 | MS.gene055749:CDS | 30.0% | |
| TTAATCAACTTCCTCAATCT+TGG | + | chr4.4:42345956-42345975 | None:intergenic | 30.0% | |
| TTATAGTTCACCACAATCAT+AGG | + | chr4.4:42344341-42344360 | None:intergenic | 30.0% | |
| ! | ACTCGTGATAACAATTTGTT+GGG | - | chr4.4:42345391-42345410 | MS.gene055749:intron | 30.0% |
| ! | AGCTCAATATGGATTTGTTT+AGG | - | chr4.4:42344954-42344973 | MS.gene055749:CDS | 30.0% |
| ! | CTGAGAGTAGTTTGTATATA+AGG | - | chr4.4:42343844-42343863 | MS.gene055749:CDS | 30.0% |
| ! | CTTTTGCAAGATTTCTTCAA+TGG | - | chr4.4:42345088-42345107 | MS.gene055749:CDS | 30.0% |
| ! | TGCTGATCATAATTTTGCAT+TGG | - | chr4.4:42344080-42344099 | MS.gene055749:CDS | 30.0% |
| !! | TGAAGATTTTGATAACAGGA+TGG | - | chr4.4:42344733-42344752 | MS.gene055749:CDS | 30.0% |
| !! | TTATGTTGCTTTCACTGATA+CGG | - | chr4.4:42343512-42343531 | MS.gene055749:CDS | 30.0% |
| !!! | ATAGTTTTCAAGTGCATTCT+TGG | + | chr4.4:42345659-42345678 | None:intergenic | 30.0% |
| AATTGAAGATGCTATTGAGG+GGG | - | chr4.4:42345750-42345769 | MS.gene055749:intron | 35.0% | |
| ATCATTGCTAGGATGTATCA+AGG | - | chr4.4:42345859-42345878 | MS.gene055749:CDS | 35.0% | |
| ATGCTAAGCGATTAATTGGT+AGG | - | chr4.4:42344240-42344259 | MS.gene055749:CDS | 35.0% | |
| CAAAGAGGAAATTGAGAAGA+TGG | - | chr4.4:42345576-42345595 | MS.gene055749:intron | 35.0% | |
| CATCTTCTCAATTTCCTCTT+TGG | + | chr4.4:42345578-42345597 | None:intergenic | 35.0% | |
| CATGGTTCTTATGAAGATGA+AGG | - | chr4.4:42344400-42344419 | MS.gene055749:CDS | 35.0% | |
| CTGATTGTGTTTGCTTGAAT+TGG | - | chr4.4:42344208-42344227 | MS.gene055749:CDS | 35.0% | |
| CTTCATCTTCATAAGAACCA+TGG | + | chr4.4:42344402-42344421 | None:intergenic | 35.0% | |
| GACTCGTGATAACAATTTGT+TGG | - | chr4.4:42345390-42345409 | MS.gene055749:intron | 35.0% | |
| GATACATCCTAGCAATGATA+GGG | + | chr4.4:42345858-42345877 | None:intergenic | 35.0% | |
| GATTACAATCACCAATGACA+AGG | - | chr4.4:42345543-42345562 | MS.gene055749:intron | 35.0% | |
| GCAAGATTTCTTCAATGGAA+AGG | - | chr4.4:42345093-42345112 | MS.gene055749:CDS | 35.0% | |
| GGAACAACATATTCATGTGT+TGG | - | chr4.4:42343426-42343445 | MS.gene055749:CDS | 35.0% | |
| GTACATGATGTTGTTCTTGT+TGG | - | chr4.4:42345034-42345053 | MS.gene055749:CDS | 35.0% | |
| GTAGGAATGGTTGTATTTCT+TGG | + | chr4.4:42345289-42345308 | None:intergenic | 35.0% | |
| TACAGAGTGACATGAAATTG+TGG | - | chr4.4:42344282-42344301 | MS.gene055749:CDS | 35.0% | |
| TACCGAAAACAGTGTTAGTA+GGG | + | chr4.4:42343581-42343600 | None:intergenic | 35.0% | |
| TCACTTCTTACTATTGAGGA+AGG | - | chr4.4:42344665-42344684 | MS.gene055749:CDS | 35.0% | |
| TCAGATGCTAAGCGATTAAT+TGG | - | chr4.4:42344236-42344255 | MS.gene055749:CDS | 35.0% | |
| TCAGTGAAAGCAACATAAGA+AGG | + | chr4.4:42343510-42343529 | None:intergenic | 35.0% | |
| TCGGAAGACTAAGGATTAAT+AGG | + | chr4.4:42343620-42343639 | None:intergenic | 35.0% | |
| TGAATTTGAGGACAAGATGA+AGG | - | chr4.4:42345813-42345832 | MS.gene055749:CDS | 35.0% | |
| TGAGACATTCAGAATACCAT+TGG | + | chr4.4:42345491-42345510 | None:intergenic | 35.0% | |
| TGATACATCCTAGCAATGAT+AGG | + | chr4.4:42345859-42345878 | None:intergenic | 35.0% | |
| TGCAAAAGTTGTTGAACCTT+GGG | + | chr4.4:42345076-42345095 | None:intergenic | 35.0% | |
| TTACCGAAAACAGTGTTAGT+AGG | + | chr4.4:42343582-42343601 | None:intergenic | 35.0% | |
| TTGCAAAAGTTGTTGAACCT+TGG | + | chr4.4:42345077-42345096 | None:intergenic | 35.0% | |
| ! | AACCCTACTAACACTGTTTT+CGG | - | chr4.4:42343576-42343595 | MS.gene055749:CDS | 35.0% |
| ! | CATATTCATGTGTTGGTGTT+TGG | - | chr4.4:42343433-42343452 | MS.gene055749:CDS | 35.0% |
| ! | GGATTTGTTTAGGAAGTGTA+TGG | - | chr4.4:42344964-42344983 | MS.gene055749:CDS | 35.0% |
| ! | GTTGGGCAAATTTGAGTTAT+CGG | - | chr4.4:42345408-42345427 | MS.gene055749:intron | 35.0% |
| ! | TTGGGCAAATTTGAGTTATC+GGG | - | chr4.4:42345409-42345428 | MS.gene055749:intron | 35.0% |
| !! | GAGGTGAAGATTTTGATAAC+AGG | - | chr4.4:42344729-42344748 | MS.gene055749:CDS | 35.0% |
| !! | TATTGAGGAAGGTATCTTTG+AGG | - | chr4.4:42344676-42344695 | MS.gene055749:CDS | 35.0% |
| !!! | GTTCTTATTTTCGATCTTGG+TGG | - | chr4.4:42344626-42344645 | MS.gene055749:CDS | 35.0% |
| !!! | TCGTTTTGAAGAGCTCAATA+TGG | - | chr4.4:42344943-42344962 | MS.gene055749:CDS | 35.0% |
| ACAATCATAGGTTTGTCAGC+AGG | + | chr4.4:42344329-42344348 | None:intergenic | 40.0% | |
| ACTGATACGGAACGTTTGAT+CGG | - | chr4.4:42343525-42343544 | MS.gene055749:CDS | 40.0% | |
| ACTGCTGGTGATACACATTT+GGG | - | chr4.4:42344707-42344726 | MS.gene055749:CDS | 40.0% | |
| AGGATATTAGCGGAAATCCA+AGG | - | chr4.4:42344795-42344814 | MS.gene055749:CDS | 40.0% | |
| ATTGAGTCCAGAAATGACAC+CGG | + | chr4.4:42344522-42344541 | None:intergenic | 40.0% | |
| CAAGCAAACACAATCAGCTA+AGG | + | chr4.4:42344205-42344224 | None:intergenic | 40.0% | |
| CAATCATAGGTTTGTCAGCA+GGG | + | chr4.4:42344328-42344347 | None:intergenic | 40.0% | |
| CATGATGTTGTTCTTGTTGG+TGG | - | chr4.4:42345037-42345056 | MS.gene055749:CDS | 40.0% | |
| GGATATTAGCGGAAATCCAA+GGG | - | chr4.4:42344796-42344815 | MS.gene055749:CDS | 40.0% | |
| GTGTTTAAGGGATGCTAAGA+TGG | - | chr4.4:42345000-42345019 | MS.gene055749:CDS | 40.0% | |
| TACAACCATTCCTACCAAGA+AGG | - | chr4.4:42345294-42345313 | MS.gene055749:intron | 40.0% | |
| TACTGCTGGTGATACACATT+TGG | - | chr4.4:42344706-42344725 | MS.gene055749:CDS | 40.0% | |
| TAGGAGAATCAGCGATGTTT+CGG | - | chr4.4:42344259-42344278 | MS.gene055749:CDS | 40.0% | |
| TAGTAGGGTTCATAGCAACT+TGG | + | chr4.4:42343566-42343585 | None:intergenic | 40.0% | |
| TATTCTGAATGTCTCAGCAG+AGG | - | chr4.4:42345495-42345514 | MS.gene055749:intron | 40.0% | |
| TCAAAGCAAACAGTGATCTG+AGG | + | chr4.4:42345460-42345479 | None:intergenic | 40.0% | |
| TCTACGAAGGAGAAAGAACA+AGG | - | chr4.4:42345368-42345387 | MS.gene055749:intron | 40.0% | |
| TGCTGAAGAGATATCTTCCA+TGG | - | chr4.4:42344382-42344401 | MS.gene055749:CDS | 40.0% | |
| TGCTGACAAACCTATGATTG+TGG | - | chr4.4:42344328-42344347 | MS.gene055749:CDS | 40.0% | |
| TGCTTTGACATTGATGCCAA+TGG | - | chr4.4:42345472-42345491 | MS.gene055749:intron | 40.0% | |
| TGGTTGGATGGAAATCAACT+TGG | - | chr4.4:42345781-42345800 | MS.gene055749:CDS | 40.0% | |
| TGTGAATCGTTGAAGTATGC+AGG | + | chr4.4:42344479-42344498 | None:intergenic | 40.0% | |
| TGTGGTGAACTATAAAGCTG+AGG | - | chr4.4:42344346-42344365 | MS.gene055749:CDS | 40.0% | |
| TTCACAACGTCAAGCTACAA+AGG | - | chr4.4:42344493-42344512 | MS.gene055749:CDS | 40.0% | |
| TTTCTGGACTCAATGTGTTG+AGG | - | chr4.4:42344528-42344547 | MS.gene055749:CDS | 40.0% | |
| TTTGCAACCCTATCATTGCT+AGG | - | chr4.4:42345848-42345867 | MS.gene055749:CDS | 40.0% | |
| ! | TGCTGAAAAGTACAAGTCTG+AGG | - | chr4.4:42345606-42345625 | MS.gene055749:intron | 40.0% |
| !! | CTTATTTTCGATCTTGGTGG+TGG | - | chr4.4:42344629-42344648 | MS.gene055749:CDS | 40.0% |
| !!! | AATCTTGTTTTTCTGCCCTG+TGG | + | chr4.4:42345527-42345546 | None:intergenic | 40.0% |
| AAAGTACAAGTCTGAGGACG+AGG | - | chr4.4:42345612-42345631 | MS.gene055749:intron | 45.0% | |
| AAGACCATAGGCAATAGCAG+CGG | + | chr4.4:42344573-42344592 | None:intergenic | 45.0% | |
| AATGGTGGTTTGAGCAGTAG+AGG | + | chr4.4:42344870-42344889 | None:intergenic | 45.0% | |
| ACCTACTCTGATAACCAACC+TGG | - | chr4.4:42345331-42345350 | MS.gene055749:intron | 45.0% | |
| ACCTGCGATTGGAATCGATT+TGG | - | chr4.4:42343404-42343423 | MS.gene055749:CDS | 45.0% | |
| AGCCTTCTTGTCAAGACCAT+AGG | + | chr4.4:42344585-42344604 | None:intergenic | 45.0% | |
| AGTACAGGATCTGTTGTTGC+TGG | - | chr4.4:42345204-42345223 | MS.gene055749:intron | 45.0% | |
| CAATCACCAATGACAAGGGT+AGG | - | chr4.4:42345548-42345567 | MS.gene055749:intron | 45.0% | |
| CACCACTCAAAATAGCAGCT+TGG | + | chr4.4:42345171-42345190 | None:intergenic | 45.0% | |
| CATGAAATTGTGGCCGTTCA+AGG | - | chr4.4:42344292-42344311 | MS.gene055749:CDS | 45.0% | |
| CTATTGAGGGGGCTATTCAA+TGG | - | chr4.4:42345761-42345780 | MS.gene055749:intron | 45.0% | |
| GAAGATGAAGGAGATTGCAG+AGG | - | chr4.4:42344412-42344431 | MS.gene055749:CDS | 45.0% | |
| GACAAGAAGGCTACAAGTAC+TGG | - | chr4.4:42344593-42344612 | MS.gene055749:CDS | 45.0% | |
| GAGATTGCAGAGGCTTATCT+TGG | - | chr4.4:42344422-42344441 | MS.gene055749:CDS | 45.0% | |
| GGAAATTGAGAAGATGGTGC+AGG | - | chr4.4:42345582-42345601 | MS.gene055749:intron | 45.0% | |
| GGATGGAAATCAACTTGGAG+AGG | - | chr4.4:42345786-42345805 | MS.gene055749:CDS | 45.0% | |
| GGTTTGAGCAGTAGAGGAAA+GGG | + | chr4.4:42344864-42344883 | None:intergenic | 45.0% | |
| TCCCTTAAACACTTCTCCAC+AGG | + | chr4.4:42344992-42345011 | None:intergenic | 45.0% | |
| TGAAAACACCTGCTCCTTCT+TGG | + | chr4.4:42345311-42345330 | None:intergenic | 45.0% | |
| TGGAGAGGCTGATGAATTTG+AGG | - | chr4.4:42345801-42345820 | MS.gene055749:CDS | 45.0% | |
| TGGTTTGAGCAGTAGAGGAA+AGG | + | chr4.4:42344865-42344884 | None:intergenic | 45.0% | |
| ! | CCTGCGATTGGAATCGATTT+GGG | - | chr4.4:42343405-42343424 | MS.gene055749:CDS | 45.0% |
| ! | CTCAATCTTCTAAGAGCCCT+TGG | + | chr4.4:42344815-42344834 | None:intergenic | 45.0% |
| ! | TGAGGGCAATGAGAAAGTAC+AGG | - | chr4.4:42345189-42345208 | MS.gene055749:intron | 45.0% |
| ! | TGCCTATGGTCTTGACAAGA+AGG | - | chr4.4:42344580-42344599 | MS.gene055749:CDS | 45.0% |
| ! | TTCTTGTTGGTGGATCGACT+AGG | - | chr4.4:42345047-42345066 | MS.gene055749:CDS | 45.0% |
| ! | TTTGAGGTGAAAGCTACTGC+TGG | - | chr4.4:42344692-42344711 | MS.gene055749:CDS | 45.0% |
| !! | ACCAGGTTGGTTATCAGAGT+AGG | + | chr4.4:42345335-42345354 | None:intergenic | 45.0% |
| !! | AGCCTGTGGAGAAGTGTTTA+AGG | - | chr4.4:42344987-42345006 | MS.gene055749:CDS | 45.0% |
| !! | GCCTGTGGAGAAGTGTTTAA+GGG | - | chr4.4:42344988-42345007 | MS.gene055749:CDS | 45.0% |
| !!! | AGCTGCTATTTTGAGTGGTG+AGG | - | chr4.4:42345171-42345190 | MS.gene055749:intron | 45.0% |
| !!! | GCTGCTATTTTGAGTGGTGA+GGG | - | chr4.4:42345172-42345191 | MS.gene055749:intron | 45.0% |
| !!! | GTCCAAGCTGCTATTTTGAG+TGG | - | chr4.4:42345166-42345185 | MS.gene055749:intron | 45.0% |
| AAAGGTGAAGGACCTGCGAT+TGG | - | chr4.4:42343393-42343412 | MS.gene055749:CDS | 50.0% | |
| AACACCTGCTCCTTCTTGGT+AGG | + | chr4.4:42345307-42345326 | None:intergenic | 50.0% | |
| AGCAGGACCATCTTCATCCA+TGG | + | chr4.4:42345908-42345927 | None:intergenic | 50.0% | |
| CAAGGGTAGGCTTTCCAAAG+AGG | - | chr4.4:42345561-42345580 | MS.gene055749:intron | 50.0% | |
| CATTCCTACCAAGAAGGAGC+AGG | - | chr4.4:42345300-42345319 | MS.gene055749:intron | 50.0% | |
| CGTCAAGCTACAAAGGATGC+CGG | - | chr4.4:42344500-42344519 | MS.gene055749:CDS | 50.0% | |
| CTGCTCCTTCTTGGTAGGAA+TGG | + | chr4.4:42345302-42345321 | None:intergenic | 50.0% | |
| CTGCTTGTGAGAGAGCTAAG+AGG | - | chr4.4:42344837-42344856 | MS.gene055749:CDS | 50.0% | |
| GACAAGATGAAGGAGCTGGA+GGG | - | chr4.4:42345823-42345842 | MS.gene055749:CDS | 50.0% | |
| GATGTTACTCCTCTCTCCCT+TGG | - | chr4.4:42345226-42345245 | MS.gene055749:intron | 50.0% | |
| GCTAGGATGTATCAAGGTGC+TGG | - | chr4.4:42345865-42345884 | MS.gene055749:CDS | 50.0% | |
| GCTGGTGATACACATTTGGG+AGG | - | chr4.4:42344710-42344729 | MS.gene055749:CDS | 50.0% | |
| GGAAAGCCTACCCTTGTCAT+TGG | + | chr4.4:42345557-42345576 | None:intergenic | 50.0% | |
| GGAGCACAAAAAGAAGGTGG+AGG | - | chr4.4:42345633-42345652 | MS.gene055749:intron | 50.0% | |
| GGGGCTATTCAATGGTTGGA+TGG | - | chr4.4:42345769-42345788 | MS.gene055749:CDS | 50.0% | |
| TACTCCTCTCTCCCTTGGTT+TGG | - | chr4.4:42345231-42345250 | MS.gene055749:intron | 50.0% | |
| TAGACCTGAATCAGCACACC+AGG | + | chr4.4:42345352-42345371 | None:intergenic | 50.0% | |
| TCCTGCAGTCTCCAAACCAA+GGG | + | chr4.4:42345245-42345264 | None:intergenic | 50.0% | |
| TGAGGACAAGATGAAGGAGC+TGG | - | chr4.4:42345819-42345838 | MS.gene055749:CDS | 50.0% | |
| TGAGGGGGCTATTCAATGGT+TGG | - | chr4.4:42345765-42345784 | MS.gene055749:CDS | 50.0% | |
| TGGATCGACTAGGATTCCCA+AGG | - | chr4.4:42345057-42345076 | MS.gene055749:CDS | 50.0% | |
| ! | CCCAAATCGATTCCAATCGC+AGG | + | chr4.4:42343408-42343427 | None:intergenic | 50.0% |
| ! | CGAGGAGCACAAAAAGAAGG+TGG | - | chr4.4:42345630-42345649 | MS.gene055749:intron | 50.0% |
| ! | GGACGAGGAGCACAAAAAGA+AGG | - | chr4.4:42345627-42345646 | MS.gene055749:intron | 50.0% |
| ! | TAGGAAGTGTATGGAGCCTG+TGG | - | chr4.4:42344973-42344992 | MS.gene055749:CDS | 50.0% |
| !! | AAGGATGCCGGTGTCATTTC+TGG | - | chr4.4:42344512-42344531 | MS.gene055749:CDS | 50.0% |
| !! | AGGATGTATCAAGGTGCTGG+TGG | - | chr4.4:42345868-42345887 | MS.gene055749:CDS | 50.0% |
| !! | GTGCTGATTCAGGTCTACGA+AGG | - | chr4.4:42345355-42345374 | MS.gene055749:intron | 50.0% |
| !! | TAAGAGCATCAACCCCGATG+AGG | - | chr4.4:42345123-42345142 | MS.gene055749:intron | 50.0% |
| ACTGCCGCTGCTATTGCCTA+TGG | - | chr4.4:42344566-42344585 | MS.gene055749:CDS | 55.0% | |
| ATAGGCAATAGCAGCGGCAG+TGG | + | chr4.4:42344567-42344586 | None:intergenic | 55.0% | |
| ATAGGTTTGTCAGCAGGGCC+AGG | + | chr4.4:42344323-42344342 | None:intergenic | 55.0% | |
| CAGCAGAGGACAAGACCACA+GGG | - | chr4.4:42345509-42345528 | MS.gene055749:intron | 55.0% | |
| CATAAGCAACGGCCTCATCG+GGG | + | chr4.4:42345138-42345157 | None:intergenic | 55.0% | |
| CCATAAGCAACGGCCTCATC+GGG | + | chr4.4:42345139-42345158 | None:intergenic | 55.0% | |
| CCTGAATCAGCACACCAGGT+TGG | + | chr4.4:42345348-42345367 | None:intergenic | 55.0% | |
| CTCCTGCAGTCTCCAAACCA+AGG | + | chr4.4:42345246-42345265 | None:intergenic | 55.0% | |
| GACTGCAGCGCCATAAGCAA+CGG | + | chr4.4:42345149-42345168 | None:intergenic | 55.0% | |
| GATGAAGATGGTCCTGCTGC+TGG | - | chr4.4:42345910-42345929 | MS.gene055749:CDS | 55.0% | |
| GCCATAAGCAACGGCCTCAT+CGG | + | chr4.4:42345140-42345159 | None:intergenic | 55.0% | |
| GGACAAGATGAAGGAGCTGG+AGG | - | chr4.4:42345822-42345841 | MS.gene055749:CDS | 55.0% | |
| GGAGGAGCCATGGATGAAGA+TGG | - | chr4.4:42345898-42345917 | MS.gene055749:CDS | 55.0% | |
| GGGCCAGGAATGACCTTGAA+CGG | + | chr4.4:42344308-42344327 | None:intergenic | 55.0% | |
| GTCTCCAAACCAAGGGAGAG+AGG | + | chr4.4:42345238-42345257 | None:intergenic | 55.0% | |
| GTGATCTGAGGAACACCCCT+TGG | + | chr4.4:42345448-42345467 | None:intergenic | 55.0% | |
| TAGGCAATAGCAGCGGCAGT+GGG | + | chr4.4:42344566-42344585 | None:intergenic | 55.0% | |
| TCAGCAGAGGACAAGACCAC+AGG | - | chr4.4:42345508-42345527 | MS.gene055749:intron | 55.0% | |
| TGGCCGTTCAAGGTCATTCC+TGG | - | chr4.4:42344302-42344321 | MS.gene055749:CDS | 55.0% | |
| !! | CCAACCTGGTGTGCTGATTC+AGG | - | chr4.4:42345345-42345364 | MS.gene055749:intron | 55.0% |
| !! | CTTGGTTTGGAGACTGCAGG+AGG | - | chr4.4:42345244-42345263 | MS.gene055749:intron | 55.0% |
| !! | TCCCTTGGTTTGGAGACTGC+AGG | - | chr4.4:42345241-42345260 | MS.gene055749:intron | 55.0% |
| CCCGATGAGGCCGTTGCTTA+TGG | - | chr4.4:42345136-42345155 | MS.gene055749:intron | 60.0% | |
| GAACACCCCTTGGAGCAGGA+GGG | + | chr4.4:42345438-42345457 | None:intergenic | 60.0% | |
| GGGTATCCCTCCTGCTCCAA+GGG | - | chr4.4:42345429-42345448 | MS.gene055749:intron | 60.0% | |
| GGTATCCCTCCTGCTCCAAG+GGG | - | chr4.4:42345430-42345449 | MS.gene055749:intron | 60.0% | |
| TGAGGAACACCCCTTGGAGC+AGG | + | chr4.4:42345442-42345461 | None:intergenic | 60.0% | |
| ! | TGGTGATGCTGGAGGAGCCA+TGG | - | chr4.4:42345888-42345907 | MS.gene055749:CDS | 60.0% |
| !! | CAAGGTGCTGGTGGTGATGC+TGG | - | chr4.4:42345877-42345896 | MS.gene055749:CDS | 60.0% |
| !! | CGGTGCTGGTCCCAAGATTG+AGG | - | chr4.4:42345942-42345961 | MS.gene055749:CDS | 60.0% |
| CCTGCTGCTGGCAGTGGAAG+CGG | - | chr4.4:42345922-42345941 | MS.gene055749:CDS | 65.0% | |
| CGGGTATCCCTCCTGCTCCA+AGG | - | chr4.4:42345428-42345447 | MS.gene055749:intron | 65.0% | |
| GATGGTCCTGCTGCTGGCAG+TGG | - | chr4.4:42345916-42345935 | MS.gene055749:CDS | 65.0% | |
| GGAACACCCCTTGGAGCAGG+AGG | + | chr4.4:42345439-42345458 | None:intergenic | 65.0% | |
| !! | GGTGCTGGTGGTGATGCTGG+AGG | - | chr4.4:42345880-42345899 | MS.gene055749:CDS | 65.0% |
| CCGCTTCCACTGCCAGCAGC+AGG | + | chr4.4:42345925-42345944 | None:intergenic | 70.0% | |
| GCTGGCAGTGGAAGCGGTGC+TGG | - | chr4.4:42345928-42345947 | MS.gene055749:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 42343384 | 42345975 | 42343384 | ID=MS.gene055749 |
| chr4.4 | mRNA | 42343384 | 42345975 | 42343384 | ID=MS.gene055749.t1;Parent=MS.gene055749 |
| chr4.4 | exon | 42345762 | 42345975 | 42345762 | ID=MS.gene055749.t1.exon1;Parent=MS.gene055749.t1 |
| chr4.4 | CDS | 42345762 | 42345975 | 42345762 | ID=cds.MS.gene055749.t1;Parent=MS.gene055749.t1 |
| chr4.4 | exon | 42343384 | 42345119 | 42343384 | ID=MS.gene055749.t1.exon2;Parent=MS.gene055749.t1 |
| chr4.4 | CDS | 42343384 | 42345119 | 42343384 | ID=cds.MS.gene055749.t1;Parent=MS.gene055749.t1 |
| Gene Sequence |
| Protein sequence |
