Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21091.t1 | XP_003591273.1 | 97.6 | 735 | 18 | 0 | 1 | 735 | 1 | 735 | 0.00E+00 | 1454.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21091.t1 | O82462 | 73.0 | 723 | 182 | 5 | 8 | 729 | 6 | 716 | 0.0e+00 | 1095.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21091.t1 | G7IAE3 | 97.6 | 735 | 18 | 0 | 1 | 735 | 1 | 735 | 0.0e+00 | 1454.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049190 | MS.gene21091 | 0.837009 | 6.69E-57 | -1.69E-46 |
MS.gene051248 | MS.gene21091 | 0.823098 | 1.66E-53 | -1.69E-46 |
MS.gene051744 | MS.gene21091 | 0.815134 | 1.08E-51 | -1.69E-46 |
MS.gene053144 | MS.gene21091 | 0.832521 | 9.01E-56 | -1.69E-46 |
MS.gene053538 | MS.gene21091 | 0.802752 | 4.83E-49 | -1.69E-46 |
MS.gene054584 | MS.gene21091 | 0.830522 | 2.80E-55 | -1.69E-46 |
MS.gene055537 | MS.gene21091 | 0.817541 | 3.13E-52 | -1.69E-46 |
MS.gene055890 | MS.gene21091 | 0.815941 | 7.14E-52 | -1.69E-46 |
MS.gene056036 | MS.gene21091 | 0.814888 | 1.23E-51 | -1.69E-46 |
MS.gene056228 | MS.gene21091 | 0.848844 | 4.73E-60 | -1.69E-46 |
MS.gene05894 | MS.gene21091 | 0.812724 | 3.67E-51 | -1.69E-46 |
MS.gene059015 | MS.gene21091 | 0.808653 | 2.79E-50 | -1.69E-46 |
MS.gene059154 | MS.gene21091 | 0.822414 | 2.40E-53 | -1.69E-46 |
MS.gene059424 | MS.gene21091 | 0.800217 | 1.60E-48 | -1.69E-46 |
MS.gene060355 | MS.gene21091 | 0.80101 | 1.10E-48 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21091.t1 | MTR_1g085150 | 97.551 | 735 | 18 | 0 | 1 | 735 | 1 | 735 | 0.0 | 1488 |
MS.gene21091.t1 | MTR_1g110430 | 32.470 | 502 | 322 | 7 | 225 | 710 | 269 | 769 | 3.00e-68 | 240 |
MS.gene21091.t1 | MTR_8g009900 | 26.457 | 223 | 133 | 7 | 227 | 428 | 55 | 267 | 1.70e-11 | 67.8 |
MS.gene21091.t1 | MTR_8g009900 | 26.457 | 223 | 133 | 7 | 227 | 428 | 55 | 267 | 3.92e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21091.t1 | AT5G26710 | 73.029 | 723 | 182 | 5 | 8 | 729 | 6 | 716 | 0.0 | 1120 |
MS.gene21091.t1 | AT1G25350 | 30.874 | 515 | 314 | 9 | 225 | 710 | 269 | 770 | 2.50e-65 | 232 |
MS.gene21091.t1 | AT1G25350 | 29.231 | 520 | 321 | 10 | 225 | 710 | 269 | 775 | 9.49e-57 | 207 |
Find 184 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCAAGCTTCTAAATCATTT+TGG | 0.193516 | 1.4:-68142602 | None:intergenic |
CTTCTATGGTTTGTCCAAAA+TGG | 0.200426 | 1.4:+68145369 | MS.gene21091:CDS |
AACAAATGCTCCACGAAATT+TGG | 0.200717 | 1.4:-68142532 | None:intergenic |
TTGACGACTGGCTGGTCTTT+TGG | 0.223662 | 1.4:-68144526 | None:intergenic |
ATACTTGTTCAACAATAAAT+TGG | 0.225280 | 1.4:-68145473 | None:intergenic |
TTGAGGAGAATTTGAAATTA+TGG | 0.240284 | 1.4:+68145004 | MS.gene21091:CDS |
CTTCTCTACTTCCTTTACTA+TGG | 0.253996 | 1.4:-68145958 | None:intergenic |
CAATTGCAGATCTAGCTATC+TGG | 0.284055 | 1.4:+68143919 | MS.gene21091:CDS |
ATGCTTAAGATTTCGCATAT+TGG | 0.287494 | 1.4:-68147115 | None:intergenic |
TGGAGAGAATCCGGCGAGTT+TGG | 0.288324 | 1.4:-68142378 | None:intergenic |
GGATGTTTCTGATAACATTA+AGG | 0.292494 | 1.4:+68144573 | MS.gene21091:CDS |
GTCAATAATCTTCTTATTGA+TGG | 0.298193 | 1.4:-68145712 | None:intergenic |
TTACCTCATTACGAAGAAAA+AGG | 0.308169 | 1.4:+68146112 | MS.gene21091:CDS |
TCAGCAAACGAAAGCTTCTA+TGG | 0.315812 | 1.4:+68145355 | MS.gene21091:CDS |
GCTATCTGGGCAGGTCTTGC+AGG | 0.316994 | 1.4:+68143933 | MS.gene21091:CDS |
CGAATTTAGCCGGTTGAATA+TGG | 0.317857 | 1.4:+68145320 | MS.gene21091:CDS |
CCAATGCCTCATCATAGAAT+TGG | 0.320420 | 1.4:+68145138 | MS.gene21091:CDS |
AGAAATGTGGGGACGGAATC+AGG | 0.323152 | 1.4:-68142422 | None:intergenic |
AGATTACTTCCCTGAGTTGA+TGG | 0.323642 | 1.4:+68144867 | MS.gene21091:CDS |
GCAACCCTTCCTAATTTCTA+TGG | 0.324310 | 1.4:+68142579 | MS.gene21091:CDS |
TGGAGAGAAAGGGATATTTC+AGG | 0.324909 | 1.4:+68147154 | MS.gene21091:CDS |
CGCAATGACAGCAGTGTGTC+TGG | 0.330957 | 1.4:-68145745 | None:intergenic |
GATGTCTGCTGCCTGCCATC+TGG | 0.343011 | 1.4:-68147228 | None:intergenic |
ATCGTAATGCTCAGTATTAC+AGG | 0.345722 | 1.4:+68145259 | MS.gene21091:CDS |
TGAAGATAGCCACTGGGTTC+AGG | 0.349425 | 1.4:-68144667 | None:intergenic |
TCAAATTCTCCTCAACACTA+TGG | 0.354098 | 1.4:-68144996 | None:intergenic |
AAGCTACCACATATACAAAA+AGG | 0.360107 | 1.4:+68145862 | MS.gene21091:CDS |
ATTAGTTAGCCTGACATTGA+TGG | 0.381393 | 1.4:+68146082 | MS.gene21091:CDS |
GCCGCCGCGCCACCGTTAGC+GGG | 0.385971 | 1.4:+68142344 | MS.gene21091:CDS |
GAAGTCACAGCAACATATAT+TGG | 0.387411 | 1.4:+68144469 | MS.gene21091:CDS |
CGCTAACGGTGGCGCGGCGG+CGG | 0.401265 | 1.4:-68142342 | None:intergenic |
ACCCTGTGACATTCCCATCT+TGG | 0.408163 | 1.4:-68145983 | None:intergenic |
TCATGGAATGGGACAAGCTC+TGG | 0.411380 | 1.4:+68145688 | MS.gene21091:CDS |
CGCCGCCGCGCCACCGTTAG+CGG | 0.413693 | 1.4:+68142343 | MS.gene21091:CDS |
GGAAGGGAGGTGTCGATGGA+TGG | 0.416190 | 1.4:-68142398 | None:intergenic |
GGAAGTAACCTTGATGGATT+GGG | 0.417880 | 1.4:+68145929 | MS.gene21091:CDS |
ATAAAAGATGTTGAGACGTT+GGG | 0.418362 | 1.4:+68144814 | MS.gene21091:CDS |
AGTATTGCAGCTGGAGAGAA+AGG | 0.419290 | 1.4:+68147143 | MS.gene21091:CDS |
AGTTGGATACACTTTATACT+TGG | 0.420137 | 1.4:-68145163 | None:intergenic |
CGGTGGCGCGGCGGCGGAGA+AGG | 0.420664 | 1.4:-68142336 | None:intergenic |
CCACATTTCTCTTGTCCAAC+GGG | 0.422646 | 1.4:+68142435 | MS.gene21091:CDS |
GATAAAGTAAAGAATGTGAA+TGG | 0.423094 | 1.4:+68144550 | MS.gene21091:CDS |
ACACGATTGGTTTCGAAGGC+CGG | 0.426191 | 1.4:-68147194 | None:intergenic |
GGATCACGGAGTGATTTGTT+TGG | 0.426882 | 1.4:-68145096 | None:intergenic |
GATGTTTCTGATAACATTAA+GGG | 0.428888 | 1.4:+68144574 | MS.gene21091:CDS |
AATTCATTACTTTCTTTAGC+AGG | 0.435143 | 1.4:-68144778 | None:intergenic |
AAAATGGAAAAGTTGAATCA+TGG | 0.436219 | 1.4:+68145385 | MS.gene21091:CDS |
AGGAAGTAACCTTGATGGAT+TGG | 0.439791 | 1.4:+68145928 | MS.gene21091:CDS |
GATCTTCCAGCTGCTGAAGT+TGG | 0.450726 | 1.4:+68144622 | MS.gene21091:CDS |
AAATGATTTAGAAGCTTGCC+AGG | 0.451118 | 1.4:+68142605 | MS.gene21091:CDS |
CCACAAAACTGAAGCTCACT+TGG | 0.452027 | 1.4:+68146042 | MS.gene21091:CDS |
CTTCCCTGAGTTGATGGAAC+TGG | 0.453446 | 1.4:+68144873 | MS.gene21091:CDS |
TTATGGAAGGAAATGATTGC+AGG | 0.457763 | 1.4:+68145021 | MS.gene21091:CDS |
GTCGATGGATGGAGAGAATC+CGG | 0.460388 | 1.4:-68142387 | None:intergenic |
ATAAAGTAAAGAATGTGAAT+GGG | 0.460399 | 1.4:+68144551 | MS.gene21091:CDS |
AAATCTCAATCTCATGGAAT+GGG | 0.463289 | 1.4:+68145677 | MS.gene21091:CDS |
GGATTGCAACGATAATAAAC+AGG | 0.467261 | 1.4:-68145117 | None:intergenic |
CAAGTATATTGATGACTACT+TGG | 0.468006 | 1.4:+68143863 | MS.gene21091:CDS |
GATAAAAGATGTTGAGACGT+TGG | 0.468506 | 1.4:+68144813 | MS.gene21091:CDS |
GCAGTGTGTCTGGGACATAC+AGG | 0.469189 | 1.4:-68145735 | None:intergenic |
CAATGCCTCATCATAGAATT+GGG | 0.472137 | 1.4:+68145139 | MS.gene21091:CDS |
AAAATCTCAATCTCATGGAA+TGG | 0.472161 | 1.4:+68145676 | MS.gene21091:CDS |
TAAAGAAAGTAATGAATTTG+TGG | 0.474527 | 1.4:+68144783 | MS.gene21091:CDS |
TTCTCATCTACGAATTTAGC+CGG | 0.482987 | 1.4:+68145310 | MS.gene21091:CDS |
GGACAAGCAAAATCATAAGT+TGG | 0.483435 | 1.4:-68145180 | None:intergenic |
ATGTCTGCTGCCTGCCATCT+GGG | 0.485977 | 1.4:-68147227 | None:intergenic |
ACAAATGCAAAAGGAGAGAA+TGG | 0.487392 | 1.4:+68144948 | MS.gene21091:CDS |
GCGCGGCGGCGGAGAAGGAA+AGG | 0.489164 | 1.4:-68142331 | None:intergenic |
CCCACATTTCTCTTGTCCAA+CGG | 0.491225 | 1.4:+68142434 | MS.gene21091:CDS |
AATTGCAGATCTAGCTATCT+GGG | 0.493842 | 1.4:+68143920 | MS.gene21091:CDS |
CGGTGAGGAAGTAACCTTGA+TGG | 0.493936 | 1.4:+68145923 | MS.gene21091:CDS |
CTTTGTTTGCAGCTTGAGGA+AGG | 0.496246 | 1.4:+68147030 | MS.gene21091:intron |
TGCTGAACGATACCAAGGTC+AGG | 0.500013 | 1.4:+68144729 | MS.gene21091:CDS |
TATGCACCTGTACTCTCATC+AGG | 0.500252 | 1.4:+68143819 | MS.gene21091:CDS |
GACCAAGATGGGAATGTCAC+AGG | 0.501663 | 1.4:+68145981 | MS.gene21091:CDS |
CGCAACAGGTCCAAATTTCG+TGG | 0.502464 | 1.4:+68142522 | MS.gene21091:intron |
TCCAATGTGAAGATAGCCAC+TGG | 0.503003 | 1.4:-68144674 | None:intergenic |
GAGTGTAGACCATATTCAAC+CGG | 0.504461 | 1.4:-68145329 | None:intergenic |
AATACTGAGCATTACGATCA+TGG | 0.505401 | 1.4:-68145254 | None:intergenic |
GGGATTGCAAATAACACGAT+TGG | 0.508386 | 1.4:-68147207 | None:intergenic |
CCTTCATGAGCATCAACAAA+TGG | 0.508448 | 1.4:-68145201 | None:intergenic |
ATGCGGACAAATGATTTCTC+AGG | 0.508905 | 1.4:-68145801 | None:intergenic |
TTTCAGGTGCTGGAAAGAGA+TGG | 0.510988 | 1.4:+68144362 | MS.gene21091:intron |
AATCAAACTCCATCAATGTC+AGG | 0.511094 | 1.4:-68146091 | None:intergenic |
TCAGCCAGTTCCATCAACTC+AGG | 0.512208 | 1.4:-68144877 | None:intergenic |
AAATGGAAAAGTTGAATCAT+GGG | 0.512472 | 1.4:+68145386 | MS.gene21091:CDS |
CTTTATCCTTGACGACTGGC+TGG | 0.513178 | 1.4:-68144534 | None:intergenic |
GACGGAATCAGGAGGAAGGG+AGG | 0.514373 | 1.4:-68142411 | None:intergenic |
AAAATTAATTAGCCAGGGTA+AGG | 0.515011 | 1.4:+68144900 | MS.gene21091:CDS |
CCAATTCTATGATGAGGCAT+TGG | 0.515257 | 1.4:-68145138 | None:intergenic |
GGCATTTCCCCAATCCATCA+AGG | 0.517350 | 1.4:-68145937 | None:intergenic |
GGAGAATTTGAAATTATGGA+AGG | 0.519163 | 1.4:+68145008 | MS.gene21091:CDS |
TCCACGTGAACAAATGCAAA+AGG | 0.523875 | 1.4:+68144939 | MS.gene21091:CDS |
AAGGTATCACTCATGCCCTT+CGG | 0.526418 | 1.4:+68145220 | MS.gene21091:CDS |
TTCAGGTGCTGGAAAGAGAT+GGG | 0.528173 | 1.4:+68144363 | MS.gene21091:intron |
GGTGTGATGTACCCTTCGTC+CGG | 0.530625 | 1.4:+68147175 | MS.gene21091:CDS |
CCATTTGTTGATGCTCATGA+AGG | 0.530665 | 1.4:+68145201 | MS.gene21091:CDS |
TTTACTTTATCCTTGACGAC+TGG | 0.533066 | 1.4:-68144538 | None:intergenic |
TGGGGACGGAATCAGGAGGA+AGG | 0.533685 | 1.4:-68142415 | None:intergenic |
CATAGTAAAGGAAGTAGAGA+AGG | 0.535865 | 1.4:+68145959 | MS.gene21091:CDS |
GCATGGAGAAGTATTGCAGC+TGG | 0.537955 | 1.4:+68147134 | MS.gene21091:CDS |
GGGAATGTCACAGGGTTAAG+TGG | 0.540528 | 1.4:+68145990 | MS.gene21091:CDS |
TTACAGGATTCAAGCGGACA+TGG | 0.540764 | 1.4:+68145275 | MS.gene21091:CDS |
TCTGATAACATTAAGGGAGG+AGG | 0.541928 | 1.4:+68144580 | MS.gene21091:CDS |
CAGCCAGTTCCATCAACTCA+GGG | 0.544119 | 1.4:-68144876 | None:intergenic |
GAAGTAGAGAAGGACCAAGA+TGG | 0.544215 | 1.4:+68145969 | MS.gene21091:CDS |
AAGTAGAGAAGGACCAAGAT+GGG | 0.546780 | 1.4:+68145970 | MS.gene21091:CDS |
AGGAGGAAGGGAGGTGTCGA+TGG | 0.549519 | 1.4:-68142402 | None:intergenic |
GATGCGGCGATCCCCGCTAA+CGG | 0.552578 | 1.4:-68142356 | None:intergenic |
TATTTGCAATCCCAGATGGC+AGG | 0.556570 | 1.4:+68147217 | MS.gene21091:CDS |
GACGCAGAGTCTGTATCAGC+CGG | 0.557290 | 1.4:+68145903 | MS.gene21091:CDS |
CGCGGCGGCGGAGAAGGAAA+GGG | 0.557658 | 1.4:-68142330 | None:intergenic |
GTGTTATTTGCAATCCCAGA+TGG | 0.560737 | 1.4:+68147213 | MS.gene21091:CDS |
CCCCGCTAACGGTGGCGCGG+CGG | 0.562116 | 1.4:-68142345 | None:intergenic |
ATGCAAAAGGAGAGAATGGA+TGG | 0.562327 | 1.4:+68144952 | MS.gene21091:CDS |
GCAGATCTAGCTATCTGGGC+AGG | 0.563032 | 1.4:+68143924 | MS.gene21091:CDS |
TAAGGGAGGAGGCAAGCCTT+CGG | 0.564581 | 1.4:+68144591 | MS.gene21091:CDS |
GGTTTGCAGTGTTGTGTCCG+TGG | 0.564738 | 1.4:+68145054 | MS.gene21091:CDS |
AATATGCGAAATCTTAAGCA+TGG | 0.566056 | 1.4:+68147117 | MS.gene21091:CDS |
CGCACAATTCCTTGCACTGT+AGG | 0.569571 | 1.4:-68145423 | None:intergenic |
GAATCCGGCGAGTTTGGATG+CGG | 0.575025 | 1.4:-68142372 | None:intergenic |
CTAACTAATTCATCTAACTC+AGG | 0.576697 | 1.4:-68146068 | None:intergenic |
TTTGGCCATAGAAATTAGGA+AGG | 0.578574 | 1.4:-68142584 | None:intergenic |
TTGGGGAAATGCCATAGTAA+AGG | 0.578640 | 1.4:+68145947 | MS.gene21091:CDS |
GCAGGGCCTGATGAGAGTAC+AGG | 0.580273 | 1.4:-68143825 | None:intergenic |
CCGTTGGACAAGAGAAATGT+GGG | 0.580974 | 1.4:-68142434 | None:intergenic |
CCACGATTTCCTACAGTGCA+AGG | 0.583620 | 1.4:+68145414 | MS.gene21091:CDS |
GTGTTGTGTCCGTGGGAAGT+TGG | 0.586102 | 1.4:+68145062 | MS.gene21091:CDS |
GTTTGCAGTGTTGTGTCCGT+GGG | 0.587122 | 1.4:+68145055 | MS.gene21091:CDS |
CATCAAGGTTACTTCCTCAC+CGG | 0.589044 | 1.4:-68145922 | None:intergenic |
GGTTTCGAAGGCCGGACGAA+GGG | 0.590280 | 1.4:-68147186 | None:intergenic |
ATGGTATTCACTTGACCGAA+GGG | 0.592206 | 1.4:-68145235 | None:intergenic |
CCTTGCACTGTAGGAAATCG+TGG | 0.592445 | 1.4:-68145414 | None:intergenic |
AACGCAAAATAACCTGACCT+TGG | 0.594893 | 1.4:-68144741 | None:intergenic |
GCGGCGATCCCCGCTAACGG+TGG | 0.596574 | 1.4:-68142353 | None:intergenic |
TTTGCAGCTTGAGGAAGGAG+AGG | 0.597573 | 1.4:+68147035 | MS.gene21091:intron |
CCCGTTGGACAAGAGAAATG+TGG | 0.597812 | 1.4:-68142435 | None:intergenic |
CCGCCGCGCCACCGTTAGCG+GGG | 0.597972 | 1.4:+68142345 | MS.gene21091:CDS |
TAAAAGATGTTGAGACGTTG+GGG | 0.598165 | 1.4:+68144815 | MS.gene21091:CDS |
AATAACACGATTGGTTTCGA+AGG | 0.600160 | 1.4:-68147198 | None:intergenic |
GCAATGACAGCAGTGTGTCT+GGG | 0.600339 | 1.4:-68145744 | None:intergenic |
CCCAGTGGCTATCTTCACAT+TGG | 0.601813 | 1.4:+68144673 | MS.gene21091:CDS |
GAAAGAGATGGGAAAGCTTG+AGG | 0.602516 | 1.4:+68144374 | MS.gene21091:CDS |
CATTTGTCCGCATCATACCT+AGG | 0.604356 | 1.4:+68145811 | MS.gene21091:CDS |
TACAGGATTCAAGCGGACAT+GGG | 0.604672 | 1.4:+68145276 | MS.gene21091:CDS |
TAAAGTAAAGAATGTGAATG+GGG | 0.604831 | 1.4:+68144552 | MS.gene21091:CDS |
AATGATTGCAGGATCAGAGA+GGG | 0.606663 | 1.4:+68145032 | MS.gene21091:CDS |
TTTGTTCTTCTGCGTCACAT+TGG | 0.608203 | 1.4:+68142549 | MS.gene21091:CDS |
AAAAGACCAGCCAGTCGTCA+AGG | 0.611058 | 1.4:+68144528 | MS.gene21091:CDS |
ATGCAGAAACCATAGTGTTG+AGG | 0.612137 | 1.4:+68144987 | MS.gene21091:CDS |
ATCGCCGCATCCAAACTCGC+CGG | 0.613745 | 1.4:+68142368 | MS.gene21091:CDS |
CATGGTATTCACTTGACCGA+AGG | 0.616177 | 1.4:-68145236 | None:intergenic |
CAGTGTGTCTGGGACATACA+GGG | 0.618476 | 1.4:-68145734 | None:intergenic |
GTATTGCAGCTGGAGAGAAA+GGG | 0.620537 | 1.4:+68147144 | MS.gene21091:CDS |
GGACAAGAGAAATGTGGGGA+CGG | 0.620645 | 1.4:-68142429 | None:intergenic |
GATCCCCGCTAACGGTGGCG+CGG | 0.624387 | 1.4:-68142348 | None:intergenic |
CGGTTTGCACCTGAACCCAG+TGG | 0.631994 | 1.4:+68144658 | MS.gene21091:CDS |
TGGTTTCGAAGGCCGGACGA+AGG | 0.632020 | 1.4:-68147187 | None:intergenic |
TTGGACCCAATTCTATGATG+AGG | 0.632796 | 1.4:-68145144 | None:intergenic |
GTATTGTTAACCCTCACTGA+TGG | 0.633663 | 1.4:+68145777 | MS.gene21091:CDS |
GGGGACGGAATCAGGAGGAA+GGG | 0.638859 | 1.4:-68142414 | None:intergenic |
AATTCAATAGTTGCAGAACA+TGG | 0.639406 | 1.4:+68144433 | MS.gene21091:CDS |
ACCAAGATGGGAATGTCACA+GGG | 0.639741 | 1.4:+68145982 | MS.gene21091:CDS |
GTTTCTGATAACATTAAGGG+AGG | 0.642874 | 1.4:+68144577 | MS.gene21091:CDS |
TTGGCCATAGAAATTAGGAA+GGG | 0.643057 | 1.4:-68142583 | None:intergenic |
CAGACACACTGCTGTCATTG+CGG | 0.643126 | 1.4:+68145746 | MS.gene21091:CDS |
CCAATGTGAAGATAGCCACT+GGG | 0.643680 | 1.4:-68144673 | None:intergenic |
AAGTTGGAAAAGTTCGCTTG+CGG | 0.645603 | 1.4:+68144638 | MS.gene21091:CDS |
CATCAACATACGCCTTACCC+TGG | 0.646586 | 1.4:-68144912 | None:intergenic |
CTTGCATATCCAACTTCCCA+CGG | 0.647797 | 1.4:-68145071 | None:intergenic |
AACGATAATAAACAGGATCA+CGG | 0.648773 | 1.4:-68145110 | None:intergenic |
TTTCTCAGGACCATCAGTGA+GGG | 0.655675 | 1.4:-68145787 | None:intergenic |
GGAAGATCTATCTCTGCCGA+AGG | 0.658068 | 1.4:-68144607 | None:intergenic |
GAAGTAACCTTGATGGATTG+GGG | 0.667338 | 1.4:+68145930 | MS.gene21091:CDS |
AGAGTCTGTATCAGCCGGTG+AGG | 0.670511 | 1.4:+68145908 | MS.gene21091:CDS |
GTGCAAGGAATTGTGCGTAG+AGG | 0.676449 | 1.4:+68145429 | MS.gene21091:CDS |
ATGATTGCAGGATCAGAGAG+GGG | 0.677471 | 1.4:+68145033 | MS.gene21091:CDS |
ATTTCTCAGGACCATCAGTG+AGG | 0.679162 | 1.4:-68145788 | None:intergenic |
AATATCAAAATCTTGCACGA+TGG | 0.684460 | 1.4:+68144407 | MS.gene21091:CDS |
AAATGATTGCAGGATCAGAG+AGG | 0.689429 | 1.4:+68145031 | MS.gene21091:CDS |
TCAGTATTACAGGATTCAAG+CGG | 0.711357 | 1.4:+68145269 | MS.gene21091:CDS |
AATGTGGGGACGGAATCAGG+AGG | 0.727109 | 1.4:-68142419 | None:intergenic |
AAAAGATGTTGAGACGTTGG+GGG | 0.753350 | 1.4:+68144816 | MS.gene21091:CDS |
CGTTGGACAAGAGAAATGTG+GGG | 0.758677 | 1.4:-68142433 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAATTCTTATAACATATA+TGG | - | chr1.4:68146666-68146685 | None:intergenic | 10.0% |
!! | AAAAATTCAATTAAGATTAC+AGG | - | chr1.4:68143058-68143077 | None:intergenic | 15.0% |
!! | AAAATTCAATTAAGATTACA+GGG | - | chr1.4:68143057-68143076 | None:intergenic | 15.0% |
!! | TTTCAAATAAAAATGAGATA+AGG | - | chr1.4:68146856-68146875 | None:intergenic | 15.0% |
!!! | TTATTTTTTTTTACACCAAA+CGG | + | chr1.4:68143198-68143217 | MS.gene21091:intron | 15.0% |
!!! | TTTAATGTATTTCTTTTGAT+TGG | + | chr1.4:68146196-68146215 | MS.gene21091:intron | 15.0% |
!! | AAAAAAAAACAATTGCATGA+CGG | - | chr1.4:68143749-68143768 | None:intergenic | 20.0% |
!! | AAGCAAATATAAACTTAAAC+AGG | - | chr1.4:68147013-68147032 | None:intergenic | 20.0% |
!! | AATCAATCAATCAATCAATT+TGG | - | chr1.4:68143589-68143608 | None:intergenic | 20.0% |
!! | AATTGCACTTCATTAATATT+GGG | + | chr1.4:68146251-68146270 | MS.gene21091:intron | 20.0% |
!! | AGCAAATATAAACTTAAACA+GGG | - | chr1.4:68147012-68147031 | None:intergenic | 20.0% |
!! | ATAAAGTAAAGAATGTGAAT+GGG | + | chr1.4:68144551-68144570 | MS.gene21091:CDS | 20.0% |
!! | ATAAGAAATACAGTAGAATA+TGG | + | chr1.4:68145552-68145571 | MS.gene21091:intron | 20.0% |
!! | ATACTTGTTCAACAATAAAT+TGG | - | chr1.4:68145476-68145495 | None:intergenic | 20.0% |
!! | ATATATATATTAAGCTCACT+AGG | - | chr1.4:68142762-68142781 | None:intergenic | 20.0% |
!! | ATCAATCAATCAATCAATTT+GGG | - | chr1.4:68143588-68143607 | None:intergenic | 20.0% |
!! | ATGATAAGCATTTATGTATA+AGG | + | chr1.4:68142839-68142858 | MS.gene21091:intron | 20.0% |
!! | GTGAGCTTAATATATATATA+AGG | + | chr1.4:68142763-68142782 | MS.gene21091:intron | 20.0% |
!! | TAAAGAAAGTAATGAATTTG+TGG | + | chr1.4:68144783-68144802 | MS.gene21091:CDS | 20.0% |
!! | TGATAAGCATTTATGTATAA+GGG | + | chr1.4:68142840-68142859 | MS.gene21091:intron | 20.0% |
!!! | AGTACTCTTCAATTTTTTTT+TGG | - | chr1.4:68142815-68142834 | None:intergenic | 20.0% |
!!! | GATAGAGTTTTTAATTGTTA+AGG | + | chr1.4:68142701-68142720 | MS.gene21091:intron | 20.0% |
!!! | GTACTCTTCAATTTTTTTTT+GGG | - | chr1.4:68142814-68142833 | None:intergenic | 20.0% |
!!! | GTCAAATTAAAGATTTTTAG+TGG | + | chr1.4:68142640-68142659 | MS.gene21091:intron | 20.0% |
!!! | TAGTTAACTTGTTTTTGTAT+AGG | + | chr1.4:68143255-68143274 | MS.gene21091:intron | 20.0% |
!!! | TTTAATTTCATTATAGTCTG+TGG | + | chr1.4:68144215-68144234 | MS.gene21091:intron | 20.0% |
!!! | TTTGTTTCTGTCATTAATAA+AGG | + | chr1.4:68146152-68146171 | MS.gene21091:intron | 20.0% |
! | AAAATGGAAAAGTTGAATCA+TGG | + | chr1.4:68145385-68145404 | MS.gene21091:CDS | 25.0% |
! | AAATGGAAAAGTTGAATCAT+GGG | + | chr1.4:68145386-68145405 | MS.gene21091:CDS | 25.0% |
! | AATTCATTACTTTCTTTAGC+AGG | - | chr1.4:68144781-68144800 | None:intergenic | 25.0% |
! | ACAACAATAATCTATTGTTG+TGG | + | chr1.4:68144180-68144199 | MS.gene21091:intron | 25.0% |
! | AGTTCAGTGATAAAATTTGA+GGG | + | chr1.4:68143644-68143663 | MS.gene21091:intron | 25.0% |
! | ATCAAAAAATCTCAATCTCA+TGG | + | chr1.4:68145671-68145690 | MS.gene21091:CDS | 25.0% |
! | ATTAATAGATCATAGAAACG+AGG | - | chr1.4:68142485-68142504 | None:intergenic | 25.0% |
! | GAATTGCACTTCATTAATAT+TGG | + | chr1.4:68146250-68146269 | MS.gene21091:intron | 25.0% |
! | GATAAAGTAAAGAATGTGAA+TGG | + | chr1.4:68144550-68144569 | MS.gene21091:CDS | 25.0% |
! | GGATATTTGTTTATACTGTA+AGG | + | chr1.4:68146617-68146636 | MS.gene21091:intron | 25.0% |
! | GTCAATAATCTTCTTATTGA+TGG | - | chr1.4:68145715-68145734 | None:intergenic | 25.0% |
! | GTGTAAACACAAAATTATAC+AGG | - | chr1.4:68146371-68146390 | None:intergenic | 25.0% |
! | TAAAGTAAAGAATGTGAATG+GGG | + | chr1.4:68144552-68144571 | MS.gene21091:CDS | 25.0% |
! | TAGTTCAGTGATAAAATTTG+AGG | + | chr1.4:68143643-68143662 | MS.gene21091:intron | 25.0% |
! | TTGAATGAATATGTAGTGTT+TGG | - | chr1.4:68143152-68143171 | None:intergenic | 25.0% |
! | TTGATTGATTGATTGACAAT+AGG | + | chr1.4:68143595-68143614 | MS.gene21091:intron | 25.0% |
! | TTTACTTATTTCCTCTTTCT+TGG | + | chr1.4:68143769-68143788 | MS.gene21091:intron | 25.0% |
!! | ATGATTCAACTTTTCCATTT+TGG | - | chr1.4:68145386-68145405 | None:intergenic | 25.0% |
!! | GATGTTTCTGATAACATTAA+GGG | + | chr1.4:68144574-68144593 | MS.gene21091:CDS | 25.0% |
!! | TATGATATTTCTGTAGTTCA+AGG | - | chr1.4:68143494-68143513 | None:intergenic | 25.0% |
!! | TCTTCTATTTCTCTATTCTT+TGG | + | chr1.4:68144261-68144280 | MS.gene21091:intron | 25.0% |
!! | TTGACTGAAAAAAACTTGTT+TGG | + | chr1.4:68142916-68142935 | MS.gene21091:intron | 25.0% |
!! | TTGAGGAGAATTTGAAATTA+TGG | + | chr1.4:68145004-68145023 | MS.gene21091:CDS | 25.0% |
!!! | GTTTGCTATAGAAATAGTTT+AGG | - | chr1.4:68143226-68143245 | None:intergenic | 25.0% |
AAAATCTCAATCTCATGGAA+TGG | + | chr1.4:68145676-68145695 | MS.gene21091:CDS | 30.0% | |
AAAATTAATTAGCCAGGGTA+AGG | + | chr1.4:68144900-68144919 | MS.gene21091:CDS | 30.0% | |
AAATCTCAATCTCATGGAAT+GGG | + | chr1.4:68145677-68145696 | MS.gene21091:CDS | 30.0% | |
AAATTAAAGCCAAGGCTTAT+TGG | - | chr1.4:68146567-68146586 | None:intergenic | 30.0% | |
AACGATAATAAACAGGATCA+CGG | - | chr1.4:68145113-68145132 | None:intergenic | 30.0% | |
AAGCTACCACATATACAAAA+AGG | + | chr1.4:68145862-68145881 | MS.gene21091:CDS | 30.0% | |
AATAGGAGAGTGATAGTTTA+AGG | + | chr1.4:68143561-68143580 | MS.gene21091:intron | 30.0% | |
AATATCAAAATCTTGCACGA+TGG | + | chr1.4:68144407-68144426 | MS.gene21091:CDS | 30.0% | |
AATATGCGAAATCTTAAGCA+TGG | + | chr1.4:68147117-68147136 | MS.gene21091:CDS | 30.0% | |
AATTCAATAGTTGCAGAACA+TGG | + | chr1.4:68144433-68144452 | MS.gene21091:CDS | 30.0% | |
AATTTGCAATTATTCGCAAC+AGG | + | chr1.4:68142508-68142527 | MS.gene21091:intron | 30.0% | |
ACAAAATTATACAGGCCAAA+TGG | - | chr1.4:68146363-68146382 | None:intergenic | 30.0% | |
ACAACTAACAAAAGAAACAC+CGG | - | chr1.4:68143704-68143723 | None:intergenic | 30.0% | |
AGCAATATTTACTGCTTGTT+TGG | - | chr1.4:68143427-68143446 | None:intergenic | 30.0% | |
AGCATGGATATACAACAAAA+AGG | - | chr1.4:68145611-68145630 | None:intergenic | 30.0% | |
AGGTAAAGTTGAATAGGTAT+AGG | - | chr1.4:68143978-68143997 | None:intergenic | 30.0% | |
AGTTGGATACACTTTATACT+TGG | - | chr1.4:68145166-68145185 | None:intergenic | 30.0% | |
ATAAAAGATGTTGAGACGTT+GGG | + | chr1.4:68144814-68144833 | MS.gene21091:CDS | 30.0% | |
ATATATTGGCAAAAAAGGAG+TGG | + | chr1.4:68144483-68144502 | MS.gene21091:CDS | 30.0% | |
ATGCTTAAGATTTCGCATAT+TGG | - | chr1.4:68147118-68147137 | None:intergenic | 30.0% | |
CATTGCATTATCTATCCATT+TGG | + | chr1.4:68146345-68146364 | MS.gene21091:intron | 30.0% | |
CCACATATACAAAAAGGATA+TGG | + | chr1.4:68145868-68145887 | MS.gene21091:CDS | 30.0% | |
CCATCAAGTTTCATAGATTA+AGG | - | chr1.4:68144313-68144332 | None:intergenic | 30.0% | |
CCTTAATCTATGAAACTTGA+TGG | + | chr1.4:68144310-68144329 | MS.gene21091:intron | 30.0% | |
CTAACTAATTCATCTAACTC+AGG | - | chr1.4:68146071-68146090 | None:intergenic | 30.0% | |
GATTGATTGACAATAGGTTA+GGG | + | chr1.4:68143601-68143620 | MS.gene21091:intron | 30.0% | |
GCAACATATATTGGCAAAAA+AGG | + | chr1.4:68144478-68144497 | MS.gene21091:CDS | 30.0% | |
GCTGAAAAATTAATTAGCCA+GGG | + | chr1.4:68144895-68144914 | MS.gene21091:CDS | 30.0% | |
GGACAATAATAAGGACAATA+TGG | - | chr1.4:68146743-68146762 | None:intergenic | 30.0% | |
GTAGTGTTTGGTAAAATTAG+CGG | - | chr1.4:68143140-68143159 | None:intergenic | 30.0% | |
GTATGTACTTTCAAGAGAAT+GGG | - | chr1.4:68146774-68146793 | None:intergenic | 30.0% | |
TATAAAACTAGTTCCATGGA+AGG | - | chr1.4:68146717-68146736 | None:intergenic | 30.0% | |
TATATTGGCAAAAAAGGAGT+GGG | + | chr1.4:68144484-68144503 | MS.gene21091:CDS | 30.0% | |
TATCACAGGTAAAGTTGAAT+AGG | - | chr1.4:68143984-68144003 | None:intergenic | 30.0% | |
TATGTACTTTCAAGAGAATG+GGG | - | chr1.4:68146773-68146792 | None:intergenic | 30.0% | |
TATTTACTGCTTGTTTGGAT+TGG | - | chr1.4:68143422-68143441 | None:intergenic | 30.0% | |
TCCTTGGTTTCTTTCAAAAT+AGG | + | chr1.4:68143544-68143563 | MS.gene21091:intron | 30.0% | |
TCTATAATAAGCTGCAAACA+TGG | - | chr1.4:68142727-68142746 | None:intergenic | 30.0% | |
TGAATAAGTGATGTTGTCTA+AGG | + | chr1.4:68142679-68142698 | MS.gene21091:intron | 30.0% | |
TGATTGATTGACAATAGGTT+AGG | + | chr1.4:68143600-68143619 | MS.gene21091:intron | 30.0% | |
TGCAAGCTATATTCCATATA+AGG | - | chr1.4:68144126-68144145 | None:intergenic | 30.0% | |
TGGGATTAGGTATATACATA+AGG | - | chr1.4:68146897-68146916 | None:intergenic | 30.0% | |
TTACCTCATTACGAAGAAAA+AGG | + | chr1.4:68146112-68146131 | MS.gene21091:CDS | 30.0% | |
TTGTTGAACAAGTATGTACA+AGG | + | chr1.4:68145481-68145500 | MS.gene21091:intron | 30.0% | |
TTGTTTAGGGATCAAATTGA+AGG | + | chr1.4:68143674-68143693 | MS.gene21091:intron | 30.0% | |
TTTATGTATAAGGGTCTGTT+CGG | + | chr1.4:68142849-68142868 | MS.gene21091:intron | 30.0% | |
TTTGACAAAAACATCTAACC+TGG | - | chr1.4:68142626-68142645 | None:intergenic | 30.0% | |
TTTGCTTCAGTGTTAAGTAT+TGG | + | chr1.4:68146809-68146828 | MS.gene21091:intron | 30.0% | |
! | AACCAAAGTGTCTATTCATA+GGG | - | chr1.4:68146938-68146957 | None:intergenic | 30.0% |
! | AGTGATCAACATTTTAAGCA+TGG | - | chr1.4:68145627-68145646 | None:intergenic | 30.0% |
! | ATACCTTTTTCTTCGTAATG+AGG | - | chr1.4:68146118-68146137 | None:intergenic | 30.0% |
! | CAAGTATATTGATGACTACT+TGG | + | chr1.4:68143863-68143882 | MS.gene21091:CDS | 30.0% |
! | CCATATCCTTTTTGTATATG+TGG | - | chr1.4:68145871-68145890 | None:intergenic | 30.0% |
! | GGAGAATTTGAAATTATGGA+AGG | + | chr1.4:68145008-68145027 | MS.gene21091:CDS | 30.0% |
! | GGATGTTTCTGATAACATTA+AGG | + | chr1.4:68144573-68144592 | MS.gene21091:CDS | 30.0% |
! | TCTTTTAAACATCCTTCCTA+TGG | + | chr1.4:68144017-68144036 | MS.gene21091:intron | 30.0% |
! | TGTTTAGTGATTGCATTTTG+TGG | + | chr1.4:68144059-68144078 | MS.gene21091:intron | 30.0% |
!! | GATTAGTTTCTTATCCTTTG+CGG | - | chr1.4:68146436-68146455 | None:intergenic | 30.0% |
!! | GTTGTTTTCATAAGCTATCT+TGG | + | chr1.4:68143284-68143303 | MS.gene21091:intron | 30.0% |
!! | TCATTTTGGCCATAGAAATT+AGG | - | chr1.4:68142591-68142610 | None:intergenic | 30.0% |
!! | TCCTATTTTGAAAGAAACCA+AGG | - | chr1.4:68143548-68143567 | None:intergenic | 30.0% |
!!! | CTCTTCAATTTTTTTTTGGG+TGG | - | chr1.4:68142811-68142830 | None:intergenic | 30.0% |
!!! | TGTTAGTTGTTGTTTGCTTT+TGG | + | chr1.4:68143714-68143733 | MS.gene21091:intron | 30.0% |
AAAAAGGAGACTCTAGCATA+TGG | + | chr1.4:68147087-68147106 | MS.gene21091:CDS | 35.0% | |
AAACATCCTTCCTATGGAAA+AGG | + | chr1.4:68144023-68144042 | MS.gene21091:intron | 35.0% | |
AAATGACACTTTGGTCTAAG+TGG | + | chr1.4:68146596-68146615 | MS.gene21091:intron | 35.0% | |
AAATGATTTAGAAGCTTGCC+AGG | + | chr1.4:68142605-68142624 | MS.gene21091:CDS | 35.0% | |
AACAAATGCTCCACGAAATT+TGG | - | chr1.4:68142535-68142554 | None:intergenic | 35.0% | |
AAGCAAACAGGTATATGCTA+GGG | - | chr1.4:68146796-68146815 | None:intergenic | 35.0% | |
AATACTGAGCATTACGATCA+TGG | - | chr1.4:68145257-68145276 | None:intergenic | 35.0% | |
AATCAAACTCCATCAATGTC+AGG | - | chr1.4:68146094-68146113 | None:intergenic | 35.0% | |
AATTGCAGATCTAGCTATCT+GGG | + | chr1.4:68143920-68143939 | MS.gene21091:CDS | 35.0% | |
ACAAATGCAAAAGGAGAGAA+TGG | + | chr1.4:68144948-68144967 | MS.gene21091:CDS | 35.0% | |
ACGAGGAAAAGATATGAGAA+AGG | - | chr1.4:68142468-68142487 | None:intergenic | 35.0% | |
AGGATGTTTAAAAGAGACTC+AGG | - | chr1.4:68144012-68144031 | None:intergenic | 35.0% | |
ATAAGCTTGTGAGAAAGTGA+TGG | - | chr1.4:68142945-68142964 | None:intergenic | 35.0% | |
ATCGAGAATAGTTTCAAGAC+TGG | - | chr1.4:68143518-68143537 | None:intergenic | 35.0% | |
ATCGTAATGCTCAGTATTAC+AGG | + | chr1.4:68145259-68145278 | MS.gene21091:CDS | 35.0% | |
ATCTGAAAAGTCCAAGAAAG+AGG | - | chr1.4:68143783-68143802 | None:intergenic | 35.0% | |
CAATGCCTCATCATAGAATT+GGG | + | chr1.4:68145139-68145158 | MS.gene21091:CDS | 35.0% | |
CATAGTAAAGGAAGTAGAGA+AGG | + | chr1.4:68145959-68145978 | MS.gene21091:CDS | 35.0% | |
CTAATCTATACACTACCATC+AGG | + | chr1.4:68146450-68146469 | MS.gene21091:intron | 35.0% | |
CTTAAGTGAACCTTCAATCT+GGG | + | chr1.4:68143445-68143464 | MS.gene21091:intron | 35.0% | |
CTTCTCTACTTCCTTTACTA+TGG | - | chr1.4:68145961-68145980 | None:intergenic | 35.0% | |
CTTGCAACATATACTAGATC+CGG | + | chr1.4:68144140-68144159 | MS.gene21091:intron | 35.0% | |
GAAGTCACAGCAACATATAT+TGG | + | chr1.4:68144469-68144488 | MS.gene21091:CDS | 35.0% | |
GAGAGAGAAAAATGACACTT+TGG | + | chr1.4:68146587-68146606 | MS.gene21091:intron | 35.0% | |
GATAAAAGATGTTGAGACGT+TGG | + | chr1.4:68144813-68144832 | MS.gene21091:CDS | 35.0% | |
GGACAAGCAAAATCATAAGT+TGG | - | chr1.4:68145183-68145202 | None:intergenic | 35.0% | |
GGATTGCAACGATAATAAAC+AGG | - | chr1.4:68145120-68145139 | None:intergenic | 35.0% | |
GGCTGAAAAATTAATTAGCC+AGG | + | chr1.4:68144894-68144913 | MS.gene21091:CDS | 35.0% | |
GGGTTTATTGTTGCCTTATA+TGG | + | chr1.4:68144110-68144129 | MS.gene21091:intron | 35.0% | |
GGTATGTACTTTCAAGAGAA+TGG | - | chr1.4:68146775-68146794 | None:intergenic | 35.0% | |
GTGCTATAAAACTAGTTCCA+TGG | - | chr1.4:68146721-68146740 | None:intergenic | 35.0% | |
GTTTCTGATAACATTAAGGG+AGG | + | chr1.4:68144577-68144596 | MS.gene21091:CDS | 35.0% | |
TAAAAGATGTTGAGACGTTG+GGG | + | chr1.4:68144815-68144834 | MS.gene21091:CDS | 35.0% | |
TACCCTATGAATAGACACTT+TGG | + | chr1.4:68146933-68146952 | MS.gene21091:intron | 35.0% | |
TACTTAACACTGAAGCAAAC+AGG | - | chr1.4:68146808-68146827 | None:intergenic | 35.0% | |
TATTCTCGATAGTTAGTCCT+TGG | + | chr1.4:68143528-68143547 | MS.gene21091:intron | 35.0% | |
TCAAATTCTCCTCAACACTA+TGG | - | chr1.4:68144999-68145018 | None:intergenic | 35.0% | |
TCAGTATTACAGGATTCAAG+CGG | + | chr1.4:68145269-68145288 | MS.gene21091:CDS | 35.0% | |
TCTCTCTCAAATTAAAGCCA+AGG | - | chr1.4:68146575-68146594 | None:intergenic | 35.0% | |
TTATGGAAGGAAATGATTGC+AGG | + | chr1.4:68145021-68145040 | MS.gene21091:CDS | 35.0% | |
TTCTCATCTACGAATTTAGC+CGG | + | chr1.4:68145310-68145329 | MS.gene21091:CDS | 35.0% | |
TTGGCCATAGAAATTAGGAA+GGG | - | chr1.4:68142586-68142605 | None:intergenic | 35.0% | |
TTTACTTTATCCTTGACGAC+TGG | - | chr1.4:68144541-68144560 | None:intergenic | 35.0% | |
TTTGGCCATAGAAATTAGGA+AGG | - | chr1.4:68142587-68142606 | None:intergenic | 35.0% | |
! | ACAAAAAGTATGAAGCTGCT+GGG | + | chr1.4:68145835-68145854 | MS.gene21091:CDS | 35.0% |
! | ACAAGGATTTCCTTTTCCAT+AGG | - | chr1.4:68144036-68144055 | None:intergenic | 35.0% |
! | AGTGGTGTTTTACATCTTGA+AGG | + | chr1.4:68146008-68146027 | MS.gene21091:CDS | 35.0% |
! | ATTAGTTAGCCTGACATTGA+TGG | + | chr1.4:68146082-68146101 | MS.gene21091:CDS | 35.0% |
! | CATCTACATTATGCCTTTTC+AGG | + | chr1.4:68144346-68144365 | MS.gene21091:intron | 35.0% |
! | CTGAAAAGGCATAATGTAGA+TGG | - | chr1.4:68144348-68144367 | None:intergenic | 35.0% |
! | CTTCTATGGTTTGTCCAAAA+TGG | + | chr1.4:68145369-68145388 | MS.gene21091:CDS | 35.0% |
! | GAACCAAAGTGTCTATTCAT+AGG | - | chr1.4:68146939-68146958 | None:intergenic | 35.0% |
! | GCTTATTTGAGTTTATCTGC+TGG | - | chr1.4:68143400-68143419 | None:intergenic | 35.0% |
! | GGCAAGCTTCTAAATCATTT+TGG | - | chr1.4:68142605-68142624 | None:intergenic | 35.0% |
! | TATTTTGCTGAACGATACCA+AGG | + | chr1.4:68144724-68144743 | MS.gene21091:CDS | 35.0% |
! | TGCATCCATTTTCAAAAGCA+GGG | - | chr1.4:68143845-68143864 | None:intergenic | 35.0% |
! | TGGTAGTCTTGATTAAGTGT+CGG | - | chr1.4:68146501-68146520 | None:intergenic | 35.0% |
! | TTGCATCCATTTTCAAAAGC+AGG | - | chr1.4:68143846-68143865 | None:intergenic | 35.0% |
!! | AATAACACGATTGGTTTCGA+AGG | - | chr1.4:68147201-68147220 | None:intergenic | 35.0% |
!! | ACTTTTAAGAGAGTGGGATT+AGG | - | chr1.4:68146910-68146929 | None:intergenic | 35.0% |
!! | CTTTTGATTGGCTGTATCTA+TGG | + | chr1.4:68146208-68146227 | MS.gene21091:intron | 35.0% |
!! | GCTATAAGCTTTAAGCTAGT+TGG | - | chr1.4:68143010-68143029 | None:intergenic | 35.0% |
!! | GTATGCACTTTTAAGAGAGT+GGG | - | chr1.4:68146916-68146935 | None:intergenic | 35.0% |
!!! | ATTTTTTTTTGGGTGGTGTC+CGG | - | chr1.4:68142804-68142823 | None:intergenic | 35.0% |
!!! | GAGAAGCGTACATTTTTAGT+TGG | + | chr1.4:68143885-68143904 | MS.gene21091:CDS | 35.0% |
AAAAGATGTTGAGACGTTGG+GGG | + | chr1.4:68144816-68144835 | MS.gene21091:CDS | 40.0% | |
AAATGATTGCAGGATCAGAG+AGG | + | chr1.4:68145031-68145050 | MS.gene21091:CDS | 40.0% | |
AACAATAAACCCTGTCAGCA+GGG | - | chr1.4:68144102-68144121 | None:intergenic | 40.0% | |
AACGCAAAATAACCTGACCT+TGG | - | chr1.4:68144744-68144763 | None:intergenic | 40.0% | |
AAGTAGAGAAGGACCAAGAT+GGG | + | chr1.4:68145970-68145989 | MS.gene21091:CDS | 40.0% | |
AAGTTGGAAAAGTTCGCTTG+CGG | + | chr1.4:68144638-68144657 | MS.gene21091:CDS | 40.0% | |
AATGATTGCAGGATCAGAGA+GGG | + | chr1.4:68145032-68145051 | MS.gene21091:CDS | 40.0% | |
ACATGATTGATAGAGAGGTG+GGG | - | chr1.4:68146538-68146557 | None:intergenic | 40.0% | |
ACTGTTCTCTGTACTTGTAC+AGG | + | chr1.4:68145644-68145663 | MS.gene21091:intron | 40.0% | |
ATGCAAAAGGAGAGAATGGA+TGG | + | chr1.4:68144952-68144971 | MS.gene21091:CDS | 40.0% | |
ATGCAGAAACCATAGTGTTG+AGG | + | chr1.4:68144987-68145006 | MS.gene21091:CDS | 40.0% | |
ATGCGGACAAATGATTTCTC+AGG | - | chr1.4:68145804-68145823 | None:intergenic | 40.0% | |
ATGGTATTCACTTGACCGAA+GGG | - | chr1.4:68145238-68145257 | None:intergenic | 40.0% | |
CAATTGCAGATCTAGCTATC+TGG | + | chr1.4:68143919-68143938 | MS.gene21091:CDS | 40.0% | |
CCAATGCCTCATCATAGAAT+TGG | + | chr1.4:68145138-68145157 | MS.gene21091:CDS | 40.0% | |
CCAATTCTATGATGAGGCAT+TGG | - | chr1.4:68145141-68145160 | None:intergenic | 40.0% | |
CCTTCATGAGCATCAACAAA+TGG | - | chr1.4:68145204-68145223 | None:intergenic | 40.0% | |
CGAATTTAGCCGGTTGAATA+TGG | + | chr1.4:68145320-68145339 | MS.gene21091:CDS | 40.0% | |
CTGTTCTCTGTACTTGTACA+GGG | + | chr1.4:68145645-68145664 | MS.gene21091:intron | 40.0% | |
GAAATAGTTTAGGCTCCGTT+TGG | - | chr1.4:68143216-68143235 | None:intergenic | 40.0% | |
GAAGCAAACAGGTATATGCT+AGG | - | chr1.4:68146797-68146816 | None:intergenic | 40.0% | |
GACATGATTGATAGAGAGGT+GGG | - | chr1.4:68146539-68146558 | None:intergenic | 40.0% | |
GAGTGTAGACCATATTCAAC+CGG | - | chr1.4:68145332-68145351 | None:intergenic | 40.0% | |
GCAACCCTTCCTAATTTCTA+TGG | + | chr1.4:68142579-68142598 | MS.gene21091:CDS | 40.0% | |
GCAATCACTAAACAAGCACA+AGG | - | chr1.4:68144053-68144072 | None:intergenic | 40.0% | |
GCTTAACCCTTGCACAAAAA+AGG | + | chr1.4:68147071-68147090 | MS.gene21091:CDS | 40.0% | |
GCTTAAGTGAACCTTCAATC+TGG | + | chr1.4:68143444-68143463 | MS.gene21091:intron | 40.0% | |
GGATCAAATTGAAGGTTTGC+CGG | + | chr1.4:68143682-68143701 | MS.gene21091:intron | 40.0% | |
GGGATTGCAAATAACACGAT+TGG | - | chr1.4:68147210-68147229 | None:intergenic | 40.0% | |
GGTCAGGATGGACAATAATA+AGG | - | chr1.4:68146752-68146771 | None:intergenic | 40.0% | |
GTATTGTTAACCCTCACTGA+TGG | + | chr1.4:68145777-68145796 | MS.gene21091:CDS | 40.0% | |
GTCCAAACAATAGAGCAAAC+CGG | - | chr1.4:68144162-68144181 | None:intergenic | 40.0% | |
TAAAGCCAAGGCTTATTGGT+GGG | - | chr1.4:68146563-68146582 | None:intergenic | 40.0% | |
TATGTTTAGCATAGCCGCAA+AGG | + | chr1.4:68146419-68146438 | MS.gene21091:intron | 40.0% | |
TCAGCAAACGAAAGCTTCTA+TGG | + | chr1.4:68145355-68145374 | MS.gene21091:CDS | 40.0% | |
TCCACGTGAACAAATGCAAA+AGG | + | chr1.4:68144939-68144958 | MS.gene21091:CDS | 40.0% | |
TCTGATAACATTAAGGGAGG+AGG | + | chr1.4:68144580-68144599 | MS.gene21091:CDS | 40.0% | |
TGACATGATTGATAGAGAGG+TGG | - | chr1.4:68146540-68146559 | None:intergenic | 40.0% | |
TGAGGGTGAGTGATTGTTTA+GGG | + | chr1.4:68143661-68143680 | MS.gene21091:intron | 40.0% | |
TGGAGAGAAAGGGATATTTC+AGG | + | chr1.4:68147154-68147173 | MS.gene21091:CDS | 40.0% | |
TGTTCTCTGTACTTGTACAG+GGG | + | chr1.4:68145646-68145665 | MS.gene21091:intron | 40.0% | |
TTAAAGCCAAGGCTTATTGG+TGG | - | chr1.4:68146564-68146583 | None:intergenic | 40.0% | |
TTCCATGGAAGGTTCATGAA+AGG | - | chr1.4:68146706-68146725 | None:intergenic | 40.0% | |
TTGAGGGTGAGTGATTGTTT+AGG | + | chr1.4:68143660-68143679 | MS.gene21091:intron | 40.0% | |
TTGGACCCAATTCTATGATG+AGG | - | chr1.4:68145147-68145166 | None:intergenic | 40.0% | |
TTGGGGAAATGCCATAGTAA+AGG | + | chr1.4:68145947-68145966 | MS.gene21091:CDS | 40.0% | |
TTTGTTCTTCTGCGTCACAT+TGG | + | chr1.4:68142549-68142568 | MS.gene21091:CDS | 40.0% | |
! | AGACGGTTTGGAAAAACTTG+TGG | - | chr1.4:68143364-68143383 | None:intergenic | 40.0% |
! | AGATTACTTCCCTGAGTTGA+TGG | + | chr1.4:68144867-68144886 | MS.gene21091:CDS | 40.0% |
! | AGGAAGTAACCTTGATGGAT+TGG | + | chr1.4:68145928-68145947 | MS.gene21091:CDS | 40.0% |
! | ATAAGTTTTGCGAGACGGTT+TGG | - | chr1.4:68143376-68143395 | None:intergenic | 40.0% |
! | ATCCGGTTTGCTCTATTGTT+TGG | + | chr1.4:68144157-68144176 | MS.gene21091:intron | 40.0% |
! | CACAAAAAGTATGAAGCTGC+TGG | + | chr1.4:68145834-68145853 | MS.gene21091:CDS | 40.0% |
! | CCATTTGTTGATGCTCATGA+AGG | + | chr1.4:68145201-68145220 | MS.gene21091:CDS | 40.0% |
! | GGATTTCCTTTTCCATAGGA+AGG | - | chr1.4:68144032-68144051 | None:intergenic | 40.0% |
! | TCCTTTTGCATTTGTTCACG+TGG | - | chr1.4:68144943-68144962 | None:intergenic | 40.0% |
! | TTTTGTGCCTAGGTATGATG+CGG | - | chr1.4:68145821-68145840 | None:intergenic | 40.0% |
!! | GAAGTAACCTTGATGGATTG+GGG | + | chr1.4:68145930-68145949 | MS.gene21091:CDS | 40.0% |
!! | GCTTCATACTTTTTGTGCCT+AGG | - | chr1.4:68145831-68145850 | None:intergenic | 40.0% |
!! | GGAAGTAACCTTGATGGATT+GGG | + | chr1.4:68145929-68145948 | MS.gene21091:CDS | 40.0% |
!! | GGTATGCACTTTTAAGAGAG+TGG | - | chr1.4:68146917-68146936 | None:intergenic | 40.0% |
!! | GTGTTATTTGCAATCCCAGA+TGG | + | chr1.4:68147213-68147232 | MS.gene21091:CDS | 40.0% |
!! | TAGTCTTGATTAAGTGTCGG+TGG | - | chr1.4:68146498-68146517 | None:intergenic | 40.0% |
!! | TTTGCTTTGTTTGCAGCTTG+AGG | + | chr1.4:68147026-68147045 | MS.gene21091:intron | 40.0% |
!!! | AGAGTCTCCTTTTTTGTGCA+AGG | - | chr1.4:68147081-68147100 | None:intergenic | 40.0% |
!!! | GAGTCTCCTTTTTTGTGCAA+GGG | - | chr1.4:68147080-68147099 | None:intergenic | 40.0% |
!!! | TTTTTTTTTGGGTGGTGTCC+GGG | - | chr1.4:68142803-68142822 | None:intergenic | 40.0% |
AAGACTACCATCAACTCCCT+TGG | + | chr1.4:68146511-68146530 | MS.gene21091:intron | 45.0% | |
ACCAAGATGGGAATGTCACA+GGG | + | chr1.4:68145982-68146001 | MS.gene21091:CDS | 45.0% | |
ACTTAAACAGGGAAGCAAGC+AGG | - | chr1.4:68147001-68147020 | None:intergenic | 45.0% | |
ACTTTCAAGAGAATGGGGTC+AGG | - | chr1.4:68146768-68146787 | None:intergenic | 45.0% | |
AGACTCAGGAGTAGTATCAC+AGG | - | chr1.4:68143998-68144017 | None:intergenic | 45.0% | |
AGTATTGCAGCTGGAGAGAA+AGG | + | chr1.4:68147143-68147162 | MS.gene21091:CDS | 45.0% | |
ATGATTGCAGGATCAGAGAG+GGG | + | chr1.4:68145033-68145052 | MS.gene21091:CDS | 45.0% | |
ATTTCTCAGGACCATCAGTG+AGG | - | chr1.4:68145791-68145810 | None:intergenic | 45.0% | |
CAACAATAAACCCTGTCAGC+AGG | - | chr1.4:68144103-68144122 | None:intergenic | 45.0% | |
CATCAAGGTTACTTCCTCAC+CGG | - | chr1.4:68145925-68145944 | None:intergenic | 45.0% | |
CATGATTGATAGAGAGGTGG+GGG | - | chr1.4:68146537-68146556 | None:intergenic | 45.0% | |
CATGGTATTCACTTGACCGA+AGG | - | chr1.4:68145239-68145258 | None:intergenic | 45.0% | |
CATTTGTCCGCATCATACCT+AGG | + | chr1.4:68145811-68145830 | MS.gene21091:CDS | 45.0% | |
CCAATGTGAAGATAGCCACT+GGG | - | chr1.4:68144676-68144695 | None:intergenic | 45.0% | |
CCACAAAACTGAAGCTCACT+TGG | + | chr1.4:68146042-68146061 | MS.gene21091:CDS | 45.0% | |
CCACATTTCTCTTGTCCAAC+GGG | + | chr1.4:68142435-68142454 | MS.gene21091:CDS | 45.0% | |
CCCACATTTCTCTTGTCCAA+CGG | + | chr1.4:68142434-68142453 | MS.gene21091:CDS | 45.0% | |
CCGTTGGACAAGAGAAATGT+GGG | - | chr1.4:68142437-68142456 | None:intergenic | 45.0% | |
CGTTGGACAAGAGAAATGTG+GGG | - | chr1.4:68142436-68142455 | None:intergenic | 45.0% | |
CTGTAGTTCAAGGACCCAAT+AGG | - | chr1.4:68143484-68143503 | None:intergenic | 45.0% | |
CTTGCATATCCAACTTCCCA+CGG | - | chr1.4:68145074-68145093 | None:intergenic | 45.0% | |
GAAAGAGATGGGAAAGCTTG+AGG | + | chr1.4:68144374-68144393 | MS.gene21091:CDS | 45.0% | |
GAAGTAGAGAAGGACCAAGA+TGG | + | chr1.4:68145969-68145988 | MS.gene21091:CDS | 45.0% | |
GACCCAATAGGAGAGAAAGT+GGG | - | chr1.4:68143472-68143491 | None:intergenic | 45.0% | |
GACCTTTCATGAACCTTCCA+TGG | + | chr1.4:68146701-68146720 | MS.gene21091:intron | 45.0% | |
GGGTGACATGATTGATAGAG+AGG | - | chr1.4:68146543-68146562 | None:intergenic | 45.0% | |
GTATTGCAGCTGGAGAGAAA+GGG | + | chr1.4:68147144-68147163 | MS.gene21091:CDS | 45.0% | |
GTCCCACTTTCTCTCCTATT+GGG | + | chr1.4:68143467-68143486 | MS.gene21091:intron | 45.0% | |
GTTCTCTGTACTTGTACAGG+GGG | + | chr1.4:68145647-68145666 | MS.gene21091:intron | 45.0% | |
TACAGGATTCAAGCGGACAT+GGG | + | chr1.4:68145276-68145295 | MS.gene21091:CDS | 45.0% | |
TAGTTGTATCCCTGCTGACA+GGG | + | chr1.4:68144090-68144109 | MS.gene21091:intron | 45.0% | |
TATGCACCTGTACTCTCATC+AGG | + | chr1.4:68143819-68143838 | MS.gene21091:CDS | 45.0% | |
TATTTGCAATCCCAGATGGC+AGG | + | chr1.4:68147217-68147236 | MS.gene21091:CDS | 45.0% | |
TCCAATGTGAAGATAGCCAC+TGG | - | chr1.4:68144677-68144696 | None:intergenic | 45.0% | |
TCTCTTTCCAGCACCTGAAA+AGG | - | chr1.4:68144362-68144381 | None:intergenic | 45.0% | |
TTACAGGATTCAAGCGGACA+TGG | + | chr1.4:68145275-68145294 | MS.gene21091:CDS | 45.0% | |
TTTCTCAGGACCATCAGTGA+GGG | - | chr1.4:68145790-68145809 | None:intergenic | 45.0% | |
! | AAGGTATCACTCATGCCCTT+CGG | + | chr1.4:68145220-68145239 | MS.gene21091:CDS | 45.0% |
! | ACTTTTCCAACTTCAGCAGC+TGG | - | chr1.4:68144631-68144650 | None:intergenic | 45.0% |
! | CCAAGTGAGCTTCAGTTTTG+TGG | - | chr1.4:68146045-68146064 | None:intergenic | 45.0% |
! | CTGGCATAAGTTTTGCGAGA+CGG | - | chr1.4:68143381-68143400 | None:intergenic | 45.0% |
! | CTTTGTTTGCAGCTTGAGGA+AGG | + | chr1.4:68147030-68147049 | MS.gene21091:intron | 45.0% |
!! | GGATCACGGAGTGATTTGTT+TGG | - | chr1.4:68145099-68145118 | None:intergenic | 45.0% |
!! | TCAGGCCCTGCTTTTGAAAA+TGG | + | chr1.4:68143837-68143856 | MS.gene21091:CDS | 45.0% |
!! | TTCAGGTGCTGGAAAGAGAT+GGG | + | chr1.4:68144363-68144382 | MS.gene21091:intron | 45.0% |
!! | TTTCAGGTGCTGGAAAGAGA+TGG | + | chr1.4:68144362-68144381 | MS.gene21091:intron | 45.0% |
!!! | CATTATGCCTTTTCAGGTGC+TGG | + | chr1.4:68144352-68144371 | MS.gene21091:intron | 45.0% |
!!! | TCTTTTGGCTTGGTTGCAGA+TGG | - | chr1.4:68144514-68144533 | None:intergenic | 45.0% |
!!! | TTTTTTTTGGGTGGTGTCCG+GGG | - | chr1.4:68142802-68142821 | None:intergenic | 45.0% |
AAAAGACCAGCCAGTCGTCA+AGG | + | chr1.4:68144528-68144547 | MS.gene21091:CDS | 50.0% | |
AACAGGGAAGCAAGCAGGTT+TGG | - | chr1.4:68146996-68147015 | None:intergenic | 50.0% | |
ACCCTGTGACATTCCCATCT+TGG | - | chr1.4:68145986-68146005 | None:intergenic | 50.0% | |
AGAAATGTGGGGACGGAATC+AGG | - | chr1.4:68142425-68142444 | None:intergenic | 50.0% | |
CAGACACACTGCTGTCATTG+CGG | + | chr1.4:68145746-68145765 | MS.gene21091:CDS | 50.0% | |
CAGCCAGTTCCATCAACTCA+GGG | - | chr1.4:68144879-68144898 | None:intergenic | 50.0% | |
CATCAACATACGCCTTACCC+TGG | - | chr1.4:68144915-68144934 | None:intergenic | 50.0% | |
CCACGATTTCCTACAGTGCA+AGG | + | chr1.4:68145414-68145433 | MS.gene21091:CDS | 50.0% | |
CCCAGTGGCTATCTTCACAT+TGG | + | chr1.4:68144673-68144692 | MS.gene21091:CDS | 50.0% | |
CCCGTTGGACAAGAGAAATG+TGG | - | chr1.4:68142438-68142457 | None:intergenic | 50.0% | |
CCTTGCACTGTAGGAAATCG+TGG | - | chr1.4:68145417-68145436 | None:intergenic | 50.0% | |
CGCAACAGGTCCAAATTTCG+TGG | + | chr1.4:68142522-68142541 | MS.gene21091:intron | 50.0% | |
CGCACAATTCCTTGCACTGT+AGG | - | chr1.4:68145426-68145445 | None:intergenic | 50.0% | |
CGGTGAGGAAGTAACCTTGA+TGG | + | chr1.4:68145923-68145942 | MS.gene21091:CDS | 50.0% | |
CTAGTTGTATCCCTGCTGAC+AGG | + | chr1.4:68144089-68144108 | MS.gene21091:intron | 50.0% | |
CTGTCAGCAGGGATACAACT+AGG | - | chr1.4:68144091-68144110 | None:intergenic | 50.0% | |
CTTTATCCTTGACGACTGGC+TGG | - | chr1.4:68144537-68144556 | None:intergenic | 50.0% | |
GAAAGTGGGACCCAGATTGA+AGG | - | chr1.4:68143458-68143477 | None:intergenic | 50.0% | |
GACCAAGATGGGAATGTCAC+AGG | + | chr1.4:68145981-68146000 | MS.gene21091:CDS | 50.0% | |
GAGAAAGGAAACGTACCCGT+TGG | - | chr1.4:68142453-68142472 | None:intergenic | 50.0% | |
GATCTTCCAGCTGCTGAAGT+TGG | + | chr1.4:68144622-68144641 | MS.gene21091:CDS | 50.0% | |
GCAATGACAGCAGTGTGTCT+GGG | - | chr1.4:68145747-68145766 | None:intergenic | 50.0% | |
GGAAGATCTATCTCTGCCGA+AGG | - | chr1.4:68144610-68144629 | None:intergenic | 50.0% | |
GGACAAGAGAAATGTGGGGA+CGG | - | chr1.4:68142432-68142451 | None:intergenic | 50.0% | |
GGACCCAATAGGAGAGAAAG+TGG | - | chr1.4:68143473-68143492 | None:intergenic | 50.0% | |
GGCATTTCCCCAATCCATCA+AGG | - | chr1.4:68145940-68145959 | None:intergenic | 50.0% | |
GGGAATGTCACAGGGTTAAG+TGG | + | chr1.4:68145990-68146009 | MS.gene21091:CDS | 50.0% | |
GGTCCCACTTTCTCTCCTAT+TGG | + | chr1.4:68143466-68143485 | MS.gene21091:intron | 50.0% | |
GTCGATGGATGGAGAGAATC+CGG | - | chr1.4:68142390-68142409 | None:intergenic | 50.0% | |
GTGCAAGGAATTGTGCGTAG+AGG | + | chr1.4:68145429-68145448 | MS.gene21091:CDS | 50.0% | |
GTTTGCAGTGTTGTGTCCGT+GGG | + | chr1.4:68145055-68145074 | MS.gene21091:CDS | 50.0% | |
TCAAGAGAATGGGGTCAGGA+TGG | - | chr1.4:68146764-68146783 | None:intergenic | 50.0% | |
TCAGCCAGTTCCATCAACTC+AGG | - | chr1.4:68144880-68144899 | None:intergenic | 50.0% | |
TCATGGAATGGGACAAGCTC+TGG | + | chr1.4:68145688-68145707 | MS.gene21091:CDS | 50.0% | |
TGAAGATAGCCACTGGGTTC+AGG | - | chr1.4:68144670-68144689 | None:intergenic | 50.0% | |
TGCTGAACGATACCAAGGTC+AGG | + | chr1.4:68144729-68144748 | MS.gene21091:CDS | 50.0% | |
TGTCACCCACCAATAAGCCT+TGG | + | chr1.4:68146555-68146574 | MS.gene21091:intron | 50.0% | |
TTTGCAGCTTGAGGAAGGAG+AGG | + | chr1.4:68147035-68147054 | MS.gene21091:intron | 50.0% | |
! | CAGTGTGTCTGGGACATACA+GGG | - | chr1.4:68145737-68145756 | None:intergenic | 50.0% |
!! | ACACGATTGGTTTCGAAGGC+CGG | - | chr1.4:68147197-68147216 | None:intergenic | 50.0% |
!! | CTTCCCTGAGTTGATGGAAC+TGG | + | chr1.4:68144873-68144892 | MS.gene21091:CDS | 50.0% |
!! | CTTGATTAAGTGTCGGTGGC+TGG | - | chr1.4:68146494-68146513 | None:intergenic | 50.0% |
!! | GCATGGAGAAGTATTGCAGC+TGG | + | chr1.4:68147134-68147153 | MS.gene21091:CDS | 50.0% |
!!! | TTGACGACTGGCTGGTCTTT+TGG | - | chr1.4:68144529-68144548 | None:intergenic | 50.0% |
AAGGTTCAGCGTTCGAACCC+CGG | + | chr1.4:68142782-68142801 | MS.gene21091:intron | 55.0% | |
AATGTGGGGACGGAATCAGG+AGG | - | chr1.4:68142422-68142441 | None:intergenic | 55.0% | |
AGAGTCTGTATCAGCCGGTG+AGG | + | chr1.4:68145908-68145927 | MS.gene21091:CDS | 55.0% | |
ATGTCTGCTGCCTGCCATCT+GGG | - | chr1.4:68147230-68147249 | None:intergenic | 55.0% | |
CGCAATGACAGCAGTGTGTC+TGG | - | chr1.4:68145748-68145767 | None:intergenic | 55.0% | |
GAATCCGGCGAGTTTGGATG+CGG | - | chr1.4:68142375-68142394 | None:intergenic | 55.0% | |
GACGCAGAGTCTGTATCAGC+CGG | + | chr1.4:68145903-68145922 | MS.gene21091:CDS | 55.0% | |
GCAGATCTAGCTATCTGGGC+AGG | + | chr1.4:68143924-68143943 | MS.gene21091:CDS | 55.0% | |
GGTGTGATGTACCCTTCGTC+CGG | + | chr1.4:68147175-68147194 | MS.gene21091:CDS | 55.0% | |
GGTTTGCAGTGTTGTGTCCG+TGG | + | chr1.4:68145054-68145073 | MS.gene21091:CDS | 55.0% | |
GTGTTGTGTCCGTGGGAAGT+TGG | + | chr1.4:68145062-68145081 | MS.gene21091:CDS | 55.0% | |
TAAGGGAGGAGGCAAGCCTT+CGG | + | chr1.4:68144591-68144610 | MS.gene21091:CDS | 55.0% | |
TGGAGAGAATCCGGCGAGTT+TGG | - | chr1.4:68142381-68142400 | None:intergenic | 55.0% | |
! | GCAGTGTGTCTGGGACATAC+AGG | - | chr1.4:68145738-68145757 | None:intergenic | 55.0% |
!! | GATTAAGTGTCGGTGGCTGG+AGG | - | chr1.4:68146491-68146510 | None:intergenic | 55.0% |
!!! | GACTGGCTGGTCTTTTGGCT+TGG | - | chr1.4:68144524-68144543 | None:intergenic | 55.0% |
ATCGCCGCATCCAAACTCGC+CGG | + | chr1.4:68142368-68142387 | MS.gene21091:CDS | 60.0% | |
ATGGGAAGGTGGCTGCCTGA+TGG | - | chr1.4:68146468-68146487 | None:intergenic | 60.0% | |
CGGTTTGCACCTGAACCCAG+TGG | + | chr1.4:68144658-68144677 | MS.gene21091:CDS | 60.0% | |
GACGGAATCAGGAGGAAGGG+AGG | - | chr1.4:68142414-68142433 | None:intergenic | 60.0% | |
GATAGAGAGGTGGGGGCCAA+GGG | - | chr1.4:68146530-68146549 | None:intergenic | 60.0% | |
GATGTCTGCTGCCTGCCATC+TGG | - | chr1.4:68147231-68147250 | None:intergenic | 60.0% | |
GCTATCTGGGCAGGTCTTGC+AGG | + | chr1.4:68143933-68143952 | MS.gene21091:CDS | 60.0% | |
GGGGACGGAATCAGGAGGAA+GGG | - | chr1.4:68142417-68142436 | None:intergenic | 60.0% | |
GGTTTCGAAGGCCGGACGAA+GGG | - | chr1.4:68147189-68147208 | None:intergenic | 60.0% | |
TGATAGAGAGGTGGGGGCCA+AGG | - | chr1.4:68146531-68146550 | None:intergenic | 60.0% | |
TGGGGACGGAATCAGGAGGA+AGG | - | chr1.4:68142418-68142437 | None:intergenic | 60.0% | |
TGGTTTCGAAGGCCGGACGA+AGG | - | chr1.4:68147190-68147209 | None:intergenic | 60.0% | |
! | GCAGGGCCTGATGAGAGTAC+AGG | - | chr1.4:68143828-68143847 | None:intergenic | 60.0% |
!! | AAGTGTCGGTGGCTGGAGGA+TGG | - | chr1.4:68146487-68146506 | None:intergenic | 60.0% |
!! | AGGAGGAAGGGAGGTGTCGA+TGG | - | chr1.4:68142405-68142424 | None:intergenic | 60.0% |
!! | AGTGTCGGTGGCTGGAGGAT+GGG | - | chr1.4:68146486-68146505 | None:intergenic | 60.0% |
!! | GGAAGGGAGGTGTCGATGGA+TGG | - | chr1.4:68142401-68142420 | None:intergenic | 60.0% |
GATGCGGCGATCCCCGCTAA+CGG | - | chr1.4:68142359-68142378 | None:intergenic | 65.0% | |
GTGGCTGGAGGATGGGAAGG+TGG | - | chr1.4:68146479-68146498 | None:intergenic | 65.0% | |
GTGGGGGCCAAGGGAGTTGA+TGG | - | chr1.4:68146521-68146540 | None:intergenic | 65.0% | |
TCGGTGGCTGGAGGATGGGA+AGG | - | chr1.4:68146482-68146501 | None:intergenic | 65.0% | |
CGCGGCGGCGGAGAAGGAAA+GGG | - | chr1.4:68142333-68142352 | None:intergenic | 70.0% | |
GATCCCCGCTAACGGTGGCG+CGG | - | chr1.4:68142351-68142370 | None:intergenic | 70.0% | |
GCGCGGCGGCGGAGAAGGAA+AGG | - | chr1.4:68142334-68142353 | None:intergenic | 75.0% | |
GCGGCGATCCCCGCTAACGG+TGG | - | chr1.4:68142356-68142375 | None:intergenic | 75.0% | |
! | CCCCGCTAACGGTGGCGCGG+CGG | - | chr1.4:68142348-68142367 | None:intergenic | 80.0% |
! | CCGCCGCGCCACCGTTAGCG+GGG | + | chr1.4:68142345-68142364 | MS.gene21091:CDS | 80.0% |
! | CGCCGCCGCGCCACCGTTAG+CGG | + | chr1.4:68142343-68142362 | MS.gene21091:CDS | 80.0% |
! | CGCTAACGGTGGCGCGGCGG+CGG | - | chr1.4:68142345-68142364 | None:intergenic | 80.0% |
! | GCCGCCGCGCCACCGTTAGC+GGG | + | chr1.4:68142344-68142363 | MS.gene21091:CDS | 80.0% |
! | CGGTGGCGCGGCGGCGGAGA+AGG | - | chr1.4:68142339-68142358 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 68142311 | 68147260 | 68142311 | ID=MS.gene21091 |
chr1.4 | mRNA | 68142311 | 68147260 | 68142311 | ID=MS.gene21091.t1;Parent=MS.gene21091 |
chr1.4 | exon | 68142311 | 68142456 | 68142311 | ID=MS.gene21091.t1.exon1;Parent=MS.gene21091.t1 |
chr1.4 | CDS | 68142311 | 68142456 | 68142311 | ID=cds.MS.gene21091.t1;Parent=MS.gene21091.t1 |
chr1.4 | exon | 68142530 | 68142626 | 68142530 | ID=MS.gene21091.t1.exon2;Parent=MS.gene21091.t1 |
chr1.4 | CDS | 68142530 | 68142626 | 68142530 | ID=cds.MS.gene21091.t1;Parent=MS.gene21091.t1 |
chr1.4 | exon | 68143801 | 68143954 | 68143801 | ID=MS.gene21091.t1.exon3;Parent=MS.gene21091.t1 |
chr1.4 | CDS | 68143801 | 68143954 | 68143801 | ID=cds.MS.gene21091.t1;Parent=MS.gene21091.t1 |
chr1.4 | exon | 68144368 | 68145491 | 68144368 | ID=MS.gene21091.t1.exon4;Parent=MS.gene21091.t1 |
chr1.4 | CDS | 68144368 | 68145491 | 68144368 | ID=cds.MS.gene21091.t1;Parent=MS.gene21091.t1 |
chr1.4 | exon | 68145666 | 68146133 | 68145666 | ID=MS.gene21091.t1.exon5;Parent=MS.gene21091.t1 |
chr1.4 | CDS | 68145666 | 68146133 | 68145666 | ID=cds.MS.gene21091.t1;Parent=MS.gene21091.t1 |
chr1.4 | exon | 68147042 | 68147260 | 68147042 | ID=MS.gene21091.t1.exon6;Parent=MS.gene21091.t1 |
chr1.4 | CDS | 68147042 | 68147260 | 68147042 | ID=cds.MS.gene21091.t1;Parent=MS.gene21091.t1 |
Gene Sequence |
Protein sequence |