Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067173.t1 | XP_013463860.1 | 96 | 551 | 15 | 1 | 1 | 551 | 1 | 544 | 1.10E-286 | 995.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067173.t1 | P54729 | 26.6 | 403 | 266 | 9 | 60 | 451 | 142 | 525 | 2.6e-26 | 121.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067173.t1 | A0A072VIE6 | 96.0 | 551 | 15 | 1 | 1 | 551 | 1 | 544 | 7.8e-287 | 995.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene067173 | 0.856311 | 3.51E-62 | -1.69E-46 |
| MS.gene049159 | MS.gene067173 | 0.879866 | 8.78E-70 | -1.69E-46 |
| MS.gene04918 | MS.gene067173 | 0.801041 | 1.09E-48 | -1.69E-46 |
| MS.gene049254 | MS.gene067173 | 0.853329 | 2.57E-61 | -1.69E-46 |
| MS.gene049283 | MS.gene067173 | 0.821438 | 4.04E-53 | -1.69E-46 |
| MS.gene049343 | MS.gene067173 | 0.833332 | 5.67E-56 | -1.69E-46 |
| MS.gene049368 | MS.gene067173 | 0.834258 | 3.33E-56 | -1.69E-46 |
| MS.gene049404 | MS.gene067173 | 0.806478 | 8.07E-50 | -1.69E-46 |
| MS.gene049419 | MS.gene067173 | -0.809204 | 2.12E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene067173 | 0.829366 | 5.36E-55 | -1.69E-46 |
| MS.gene049435 | MS.gene067173 | 0.830853 | 2.32E-55 | -1.69E-46 |
| MS.gene049452 | MS.gene067173 | 0.864338 | 1.31E-64 | -1.69E-46 |
| MS.gene049499 | MS.gene067173 | 0.807167 | 5.77E-50 | -1.69E-46 |
| MS.gene049801 | MS.gene067173 | 0.80501 | 1.64E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene067173 | 0.814689 | 1.36E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene067173 | 0.853644 | 2.09E-61 | -1.69E-46 |
| MS.gene050026 | MS.gene067173 | 0.816207 | 6.23E-52 | -1.69E-46 |
| MS.gene050073 | MS.gene067173 | 0.818731 | 1.68E-52 | -1.69E-46 |
| MS.gene050105 | MS.gene067173 | 0.816842 | 4.49E-52 | -1.69E-46 |
| MS.gene050355 | MS.gene067173 | 0.809592 | 1.75E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene067173 | 0.817948 | 2.53E-52 | -1.69E-46 |
| MS.gene050559 | MS.gene067173 | 0.87086 | 1.06E-66 | -1.69E-46 |
| MS.gene050561 | MS.gene067173 | 0.873195 | 1.77E-67 | -1.69E-46 |
| MS.gene050562 | MS.gene067173 | 0.858427 | 8.30E-63 | -1.69E-46 |
| MS.gene050605 | MS.gene067173 | 0.83413 | 3.58E-56 | -1.69E-46 |
| MS.gene050654 | MS.gene067173 | 0.815476 | 9.07E-52 | -1.69E-46 |
| MS.gene050680 | MS.gene067173 | 0.810771 | 9.77E-51 | -1.69E-46 |
| MS.gene050689 | MS.gene067173 | 0.80145 | 8.95E-49 | -1.69E-46 |
| MS.gene050737 | MS.gene067173 | 0.812709 | 3.70E-51 | -1.69E-46 |
| MS.gene050759 | MS.gene067173 | 0.841207 | 5.47E-58 | -1.69E-46 |
| MS.gene050844 | MS.gene067173 | 0.822867 | 1.88E-53 | -1.69E-46 |
| MS.gene050905 | MS.gene067173 | -0.804502 | 2.09E-49 | -1.69E-46 |
| MS.gene050941 | MS.gene067173 | 0.818275 | 2.13E-52 | -1.69E-46 |
| MS.gene050953 | MS.gene067173 | 0.81138 | 7.21E-51 | -1.69E-46 |
| MS.gene050962 | MS.gene067173 | 0.833913 | 4.06E-56 | -1.69E-46 |
| MS.gene051181 | MS.gene067173 | 0.841381 | 4.92E-58 | -1.69E-46 |
| MS.gene051198 | MS.gene067173 | 0.849028 | 4.21E-60 | -1.69E-46 |
| MS.gene051247 | MS.gene067173 | 0.805308 | 1.42E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene067173 | 0.840777 | 7.09E-58 | -1.69E-46 |
| MS.gene051332 | MS.gene067173 | 0.834485 | 2.92E-56 | -1.69E-46 |
| MS.gene051363 | MS.gene067173 | 0.810294 | 1.24E-50 | -1.69E-46 |
| MS.gene051368 | MS.gene067173 | 0.840337 | 9.24E-58 | -1.69E-46 |
| MS.gene051543 | MS.gene067173 | 0.81702 | 4.09E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene067173 | 0.860897 | 1.50E-63 | -1.69E-46 |
| MS.gene051800 | MS.gene067173 | 0.843091 | 1.73E-58 | -1.69E-46 |
| MS.gene051975 | MS.gene067173 | 0.812622 | 3.86E-51 | -1.69E-46 |
| MS.gene052012 | MS.gene067173 | 0.802839 | 4.64E-49 | -1.69E-46 |
| MS.gene052037 | MS.gene067173 | 0.804986 | 1.66E-49 | -1.69E-46 |
| MS.gene052108 | MS.gene067173 | 0.803203 | 3.90E-49 | -1.69E-46 |
| MS.gene052208 | MS.gene067173 | 0.815277 | 1.00E-51 | -1.69E-46 |
| MS.gene052239 | MS.gene067173 | -0.810078 | 1.38E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene067173 | 0.839659 | 1.39E-57 | -1.69E-46 |
| MS.gene052426 | MS.gene067173 | 0.810773 | 9.76E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene067173 | 0.804196 | 2.43E-49 | -1.69E-46 |
| MS.gene052500 | MS.gene067173 | 0.824268 | 8.85E-54 | -1.69E-46 |
| MS.gene052502 | MS.gene067173 | 0.813567 | 2.40E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene067173 | 0.83088 | 2.29E-55 | -1.69E-46 |
| MS.gene052518 | MS.gene067173 | 0.802153 | 6.42E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene067173 | 0.856858 | 2.42E-62 | -1.69E-46 |
| MS.gene052534 | MS.gene067173 | 0.803322 | 3.68E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene067173 | 0.830945 | 2.21E-55 | -1.69E-46 |
| MS.gene052584 | MS.gene067173 | 0.833679 | 4.64E-56 | -1.69E-46 |
| MS.gene052586 | MS.gene067173 | 0.800871 | 1.18E-48 | -1.69E-46 |
| MS.gene052609 | MS.gene067173 | 0.801021 | 1.10E-48 | -1.69E-46 |
| MS.gene052674 | MS.gene067173 | 0.833898 | 4.09E-56 | -1.69E-46 |
| MS.gene052675 | MS.gene067173 | 0.832475 | 9.26E-56 | -1.69E-46 |
| MS.gene052677 | MS.gene067173 | 0.837465 | 5.12E-57 | -1.69E-46 |
| MS.gene052773 | MS.gene067173 | 0.838847 | 2.26E-57 | -1.69E-46 |
| MS.gene052826 | MS.gene067173 | 0.817446 | 3.28E-52 | -1.69E-46 |
| MS.gene052855 | MS.gene067173 | 0.802624 | 5.14E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene067173 | 0.839467 | 1.56E-57 | -1.69E-46 |
| MS.gene052954 | MS.gene067173 | 0.837262 | 5.77E-57 | -1.69E-46 |
| MS.gene053006 | MS.gene067173 | 0.829419 | 5.20E-55 | -1.69E-46 |
| MS.gene053008 | MS.gene067173 | 0.836914 | 7.08E-57 | -1.69E-46 |
| MS.gene053079 | MS.gene067173 | 0.813087 | 3.06E-51 | -1.69E-46 |
| MS.gene05308 | MS.gene067173 | 0.832239 | 1.06E-55 | -1.69E-46 |
| MS.gene053166 | MS.gene067173 | 0.822083 | 2.86E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene067173 | 0.86302 | 3.35E-64 | -1.69E-46 |
| MS.gene053272 | MS.gene067173 | -0.818541 | 1.86E-52 | -1.69E-46 |
| MS.gene053296 | MS.gene067173 | 0.813876 | 2.05E-51 | -1.69E-46 |
| MS.gene05350 | MS.gene067173 | 0.811352 | 7.31E-51 | -1.69E-46 |
| MS.gene053541 | MS.gene067173 | 0.803816 | 2.91E-49 | -1.69E-46 |
| MS.gene053542 | MS.gene067173 | 0.815209 | 1.04E-51 | -1.69E-46 |
| MS.gene05364 | MS.gene067173 | 0.817563 | 3.09E-52 | -1.69E-46 |
| MS.gene053931 | MS.gene067173 | 0.862134 | 6.28E-64 | -1.69E-46 |
| MS.gene053998 | MS.gene067173 | 0.833031 | 6.73E-56 | -1.69E-46 |
| MS.gene05414 | MS.gene067173 | 0.821087 | 4.86E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene067173 | 0.842186 | 3.01E-58 | -1.69E-46 |
| MS.gene054236 | MS.gene067173 | 0.841573 | 4.38E-58 | -1.69E-46 |
| MS.gene054405 | MS.gene067173 | 0.806167 | 9.38E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene067173 | 0.848882 | 4.62E-60 | -1.69E-46 |
| MS.gene054559 | MS.gene067173 | 0.8019 | 7.24E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene067173 | 0.817302 | 3.54E-52 | -1.69E-46 |
| MS.gene054582 | MS.gene067173 | 0.803466 | 3.44E-49 | -1.69E-46 |
| MS.gene05458 | MS.gene067173 | 0.824525 | 7.70E-54 | -1.69E-46 |
| MS.gene054651 | MS.gene067173 | 0.878635 | 2.39E-69 | -1.69E-46 |
| MS.gene054657 | MS.gene067173 | 0.830813 | 2.38E-55 | -1.69E-46 |
| MS.gene054658 | MS.gene067173 | 0.816223 | 6.18E-52 | -1.69E-46 |
| MS.gene054775 | MS.gene067173 | 0.829632 | 4.62E-55 | -1.69E-46 |
| MS.gene054892 | MS.gene067173 | 0.814919 | 1.21E-51 | -1.69E-46 |
| MS.gene054893 | MS.gene067173 | 0.815015 | 1.15E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene067173 | 0.850411 | 1.73E-60 | -1.69E-46 |
| MS.gene05510 | MS.gene067173 | 0.821554 | 3.80E-53 | -1.69E-46 |
| MS.gene055166 | MS.gene067173 | 0.802821 | 4.68E-49 | -1.69E-46 |
| MS.gene05517 | MS.gene067173 | 0.817963 | 2.51E-52 | -1.69E-46 |
| MS.gene055222 | MS.gene067173 | 0.843076 | 1.75E-58 | -1.69E-46 |
| MS.gene055227 | MS.gene067173 | 0.827179 | 1.81E-54 | -1.69E-46 |
| MS.gene055228 | MS.gene067173 | 0.826981 | 2.01E-54 | -1.69E-46 |
| MS.gene055464 | MS.gene067173 | 0.80434 | 2.26E-49 | -1.69E-46 |
| MS.gene055586 | MS.gene067173 | 0.832962 | 7.01E-56 | -1.69E-46 |
| MS.gene055589 | MS.gene067173 | 0.802529 | 5.37E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene067173 | 0.82854 | 8.50E-55 | -1.69E-46 |
| MS.gene055701 | MS.gene067173 | 0.816092 | 6.61E-52 | -1.69E-46 |
| MS.gene055778 | MS.gene067173 | 0.806298 | 8.80E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene067173 | 0.850536 | 1.59E-60 | -1.69E-46 |
| MS.gene055841 | MS.gene067173 | 0.831573 | 1.55E-55 | -1.69E-46 |
| MS.gene055926 | MS.gene067173 | 0.832266 | 1.04E-55 | -1.69E-46 |
| MS.gene056045 | MS.gene067173 | 0.801005 | 1.10E-48 | -1.69E-46 |
| MS.gene05604 | MS.gene067173 | 0.801682 | 8.03E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene067173 | 0.826565 | 2.53E-54 | -1.69E-46 |
| MS.gene056162 | MS.gene067173 | 0.857189 | 1.93E-62 | -1.69E-46 |
| MS.gene056174 | MS.gene067173 | 0.86929 | 3.46E-66 | -1.69E-46 |
| MS.gene056252 | MS.gene067173 | 0.824133 | 9.52E-54 | -1.69E-46 |
| MS.gene056254 | MS.gene067173 | 0.810692 | 1.02E-50 | -1.69E-46 |
| MS.gene056363 | MS.gene067173 | 0.800769 | 1.23E-48 | -1.69E-46 |
| MS.gene056366 | MS.gene067173 | 0.814946 | 1.19E-51 | -1.69E-46 |
| MS.gene056480 | MS.gene067173 | 0.817609 | 3.02E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene067173 | 0.838355 | 3.02E-57 | -1.69E-46 |
| MS.gene056595 | MS.gene067173 | 0.812731 | 3.66E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene067173 | 0.821865 | 3.22E-53 | -1.69E-46 |
| MS.gene056776 | MS.gene067173 | 0.825003 | 5.94E-54 | -1.69E-46 |
| MS.gene05686 | MS.gene067173 | 0.872797 | 2.41E-67 | -1.69E-46 |
| MS.gene056873 | MS.gene067173 | 0.812308 | 4.53E-51 | -1.69E-46 |
| MS.gene05690 | MS.gene067173 | 0.839979 | 1.15E-57 | -1.69E-46 |
| MS.gene056973 | MS.gene067173 | 0.81921 | 1.31E-52 | -1.69E-46 |
| MS.gene057026 | MS.gene067173 | 0.813662 | 2.28E-51 | -1.69E-46 |
| MS.gene057034 | MS.gene067173 | 0.824398 | 8.25E-54 | -1.69E-46 |
| MS.gene057060 | MS.gene067173 | 0.801639 | 8.19E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene067173 | 0.910149 | 2.59E-82 | -1.69E-46 |
| MS.gene057314 | MS.gene067173 | 0.812738 | 3.65E-51 | -1.69E-46 |
| MS.gene057392 | MS.gene067173 | 0.814393 | 1.58E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene067173 | 0.827304 | 1.68E-54 | -1.69E-46 |
| MS.gene057598 | MS.gene067173 | 0.849467 | 3.17E-60 | -1.69E-46 |
| MS.gene057601 | MS.gene067173 | 0.813962 | 1.96E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene067173 | 0.84411 | 9.26E-59 | -1.69E-46 |
| MS.gene057855 | MS.gene067173 | 0.884418 | 1.95E-71 | -1.69E-46 |
| MS.gene057869 | MS.gene067173 | 0.832781 | 7.77E-56 | -1.69E-46 |
| MS.gene057915 | MS.gene067173 | 0.854198 | 1.44E-61 | -1.69E-46 |
| MS.gene058008 | MS.gene067173 | 0.852103 | 5.75E-61 | -1.69E-46 |
| MS.gene058009 | MS.gene067173 | 0.874438 | 6.75E-68 | -1.69E-46 |
| MS.gene058010 | MS.gene067173 | 0.878603 | 2.46E-69 | -1.69E-46 |
| MS.gene058037 | MS.gene067173 | 0.826104 | 3.26E-54 | -1.69E-46 |
| MS.gene058081 | MS.gene067173 | 0.814093 | 1.84E-51 | -1.69E-46 |
| MS.gene058088 | MS.gene067173 | 0.825686 | 4.09E-54 | -1.69E-46 |
| MS.gene058146 | MS.gene067173 | 0.810727 | 9.98E-51 | -1.69E-46 |
| MS.gene058159 | MS.gene067173 | 0.807799 | 4.24E-50 | -1.69E-46 |
| MS.gene058223 | MS.gene067173 | -0.815192 | 1.05E-51 | -1.69E-46 |
| MS.gene058292 | MS.gene067173 | 0.820861 | 5.48E-53 | -1.69E-46 |
| MS.gene058355 | MS.gene067173 | 0.804224 | 2.39E-49 | -1.69E-46 |
| MS.gene058427 | MS.gene067173 | 0.840024 | 1.12E-57 | -1.69E-46 |
| MS.gene05847 | MS.gene067173 | 0.820799 | 5.67E-53 | -1.69E-46 |
| MS.gene058548 | MS.gene067173 | 0.828826 | 7.25E-55 | -1.69E-46 |
| MS.gene058595 | MS.gene067173 | 0.839542 | 1.49E-57 | -1.69E-46 |
| MS.gene058625 | MS.gene067173 | 0.841321 | 5.10E-58 | -1.69E-46 |
| MS.gene058781 | MS.gene067173 | 0.857863 | 1.22E-62 | -1.69E-46 |
| MS.gene058783 | MS.gene067173 | 0.884717 | 1.51E-71 | -1.69E-46 |
| MS.gene058979 | MS.gene067173 | 0.892378 | 1.68E-74 | -1.69E-46 |
| MS.gene05897 | MS.gene067173 | 0.830055 | 3.64E-55 | -1.69E-46 |
| MS.gene059272 | MS.gene067173 | 0.801963 | 7.03E-49 | -1.69E-46 |
| MS.gene059283 | MS.gene067173 | 0.847116 | 1.42E-59 | -1.69E-46 |
| MS.gene059317 | MS.gene067173 | 0.807687 | 4.47E-50 | -1.69E-46 |
| MS.gene059382 | MS.gene067173 | 0.804042 | 2.61E-49 | -1.69E-46 |
| MS.gene059438 | MS.gene067173 | 0.801143 | 1.03E-48 | -1.69E-46 |
| MS.gene059439 | MS.gene067173 | 0.820431 | 6.88E-53 | -1.69E-46 |
| MS.gene05952 | MS.gene067173 | 0.800522 | 1.39E-48 | -1.69E-46 |
| MS.gene059550 | MS.gene067173 | 0.817547 | 3.12E-52 | -1.69E-46 |
| MS.gene059625 | MS.gene067173 | 0.808349 | 3.24E-50 | -1.69E-46 |
| MS.gene05979 | MS.gene067173 | 0.809554 | 1.79E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene067173 | 0.849839 | 2.50E-60 | -1.69E-46 |
| MS.gene05985 | MS.gene067173 | -0.811694 | 6.16E-51 | -1.69E-46 |
| MS.gene059935 | MS.gene067173 | 0.804557 | 2.04E-49 | -1.69E-46 |
| MS.gene060011 | MS.gene067173 | 0.849753 | 2.64E-60 | -1.69E-46 |
| MS.gene060167 | MS.gene067173 | 0.812716 | 3.69E-51 | -1.69E-46 |
| MS.gene060244 | MS.gene067173 | 0.810672 | 1.03E-50 | -1.69E-46 |
| MS.gene060259 | MS.gene067173 | 0.803962 | 2.71E-49 | -1.69E-46 |
| MS.gene060310 | MS.gene067173 | 0.831792 | 1.37E-55 | -1.69E-46 |
| MS.gene060322 | MS.gene067173 | 0.841987 | 3.40E-58 | -1.69E-46 |
| MS.gene060365 | MS.gene067173 | 0.812897 | 3.36E-51 | -1.69E-46 |
| MS.gene060435 | MS.gene067173 | 0.812922 | 3.32E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene067173 | 0.807665 | 4.52E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene067173 | 0.843211 | 1.61E-58 | -1.69E-46 |
| MS.gene060685 | MS.gene067173 | 0.807231 | 5.59E-50 | -1.69E-46 |
| MS.gene060777 | MS.gene067173 | 0.850945 | 1.22E-60 | -1.69E-46 |
| MS.gene060803 | MS.gene067173 | 0.823622 | 1.25E-53 | -1.69E-46 |
| MS.gene060840 | MS.gene067173 | 0.813177 | 2.92E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene067173 | 0.815651 | 8.29E-52 | -1.69E-46 |
| MS.gene060933 | MS.gene067173 | 0.815832 | 7.55E-52 | -1.69E-46 |
| MS.gene060935 | MS.gene067173 | 0.878422 | 2.84E-69 | -1.69E-46 |
| MS.gene060937 | MS.gene067173 | 0.863244 | 2.86E-64 | -1.69E-46 |
| MS.gene060998 | MS.gene067173 | 0.819915 | 9.04E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067173.t1 | MTR_2g450730 | 96.007 | 551 | 15 | 1 | 1 | 551 | 1 | 544 | 0.0 | 1075 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067173.t1 | AT2G12550 | 55.872 | 562 | 228 | 8 | 1 | 546 | 1 | 558 | 0.0 | 631 |
Find 125 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCAAATCATCTTCTTATT+TGG | 0.145142 | 2.2:+35797003 | None:intergenic |
| TGTAAATCAGAATTGGTTTC+TGG | 0.155036 | 2.2:+35797637 | None:intergenic |
| CAGATCCACGGCCTTCTTTA+AGG | 0.187611 | 2.2:+35797949 | None:intergenic |
| CTACTCACCTCAATGACTTT+TGG | 0.271684 | 2.2:+35800714 | None:intergenic |
| AGAAACCAATTCTGATTTAC+AGG | 0.272571 | 2.2:-35797635 | MS.gene067173:intron |
| TACTGTCACTTCTCCTCAAC+AGG | 0.299237 | 2.2:-35804160 | MS.gene067173:CDS |
| GGGGTGGTGGCATTTCATTC+TGG | 0.301341 | 2.2:-35798831 | MS.gene067173:CDS |
| TACCTAATTGGGTTAGGGTT+AGG | 0.307949 | 2.2:+35804208 | None:intergenic |
| TCATGCTACGGGACATTAGA+TGG | 0.315239 | 2.2:-35799140 | MS.gene067173:CDS |
| GAATTCTACCAGCACAAATA+AGG | 0.341318 | 2.2:+35804250 | None:intergenic |
| ACCCTAACCCTAACCCAATT+AGG | 0.342476 | 2.2:-35804210 | MS.gene067173:CDS |
| AAGAAGTCGATTTAGAGAAT+TGG | 0.355332 | 2.2:-35804338 | MS.gene067173:CDS |
| CTGAACGAATTGGTCACTAT+TGG | 0.357481 | 2.2:-35797920 | MS.gene067173:CDS |
| GATCTTCAACCCCATTCATT+TGG | 0.359756 | 2.2:+35797182 | None:intergenic |
| ACCTAATTGGGTTAGGGTTA+GGG | 0.372520 | 2.2:+35804209 | None:intergenic |
| CTTAAAGAAGGCCGTGGATC+TGG | 0.374229 | 2.2:-35797948 | MS.gene067173:CDS |
| AGATCCACGGCCTTCTTTAA+GGG | 0.381674 | 2.2:+35797950 | None:intergenic |
| TGTTACCTGTAAATCAGAAT+TGG | 0.383655 | 2.2:+35797630 | None:intergenic |
| ACCATGTCAATTTGCAGTAT+TGG | 0.385264 | 2.2:+35799174 | None:intergenic |
| TGCAAAAGCGAAGTTTGTTC+AGG | 0.395049 | 2.2:-35798775 | MS.gene067173:intron |
| CATAACTGAGTACCTGTCTA+TGG | 0.395210 | 2.2:-35797047 | MS.gene067173:CDS |
| CTCATAGGCTTGCTCGTATT+AGG | 0.406605 | 2.2:-35804107 | MS.gene067173:intron |
| CTTGCCTTGATTTCTCCAAC+TGG | 0.414108 | 2.2:+35798808 | None:intergenic |
| TTTGATACCTAATTGGGTTA+GGG | 0.418819 | 2.2:+35804203 | None:intergenic |
| TTCATTAACCTTATTTGTGC+TGG | 0.424720 | 2.2:-35804258 | MS.gene067173:CDS |
| CTGCAACTGCATTGGCTGAA+AGG | 0.425202 | 2.2:-35801778 | MS.gene067173:CDS |
| TTCCTGCCCTAGCCATTTCA+AGG | 0.427968 | 2.2:+35799097 | None:intergenic |
| CTGTCTATGGTTGAGTCTGC+AGG | 0.429526 | 2.2:-35797034 | MS.gene067173:CDS |
| TGCTGGAAAGCGCCTTGAAA+TGG | 0.430491 | 2.2:-35799109 | MS.gene067173:CDS |
| GACATTCTAGACCAAATGAA+TGG | 0.434790 | 2.2:-35797193 | MS.gene067173:CDS |
| GACATTGAAGTTAATATTGA+AGG | 0.441170 | 2.2:-35797076 | MS.gene067173:CDS |
| CCAGGGAGCAAAAGCGGTAT+GGG | 0.441248 | 2.2:-35797979 | MS.gene067173:intron |
| GCAGCAGTTGAATTCATTTG+AGG | 0.444304 | 2.2:+35797268 | None:intergenic |
| TGAACGAATTGGTCACTATT+GGG | 0.444732 | 2.2:-35797919 | MS.gene067173:intron |
| TTCTTCACGTAACGAAGAAA+TGG | 0.446494 | 2.2:+35804314 | None:intergenic |
| AGTGACAGTAGCGAGAATCT+TGG | 0.449149 | 2.2:+35804173 | None:intergenic |
| ATTTGGCAGGGCAGTAATGA+TGG | 0.451862 | 2.2:-35801541 | MS.gene067173:intron |
| AGAAGAAAGGGATGTGGAGA+TGG | 0.456681 | 2.2:-35797149 | MS.gene067173:CDS |
| GGTTGCATATTCTCAGCCTC+AGG | 0.456720 | 2.2:+35797289 | None:intergenic |
| ATCACAATAAAACAGAAGAA+AGG | 0.465013 | 2.2:-35797162 | MS.gene067173:CDS |
| CATAGACAGGTACTCAGTTA+TGG | 0.465982 | 2.2:+35797048 | None:intergenic |
| GGCATTTCATTCTGGCCAGT+TGG | 0.467585 | 2.2:-35798823 | MS.gene067173:CDS |
| TTGAGACTAGAGCTGCTTGA+AGG | 0.470120 | 2.2:-35798852 | MS.gene067173:CDS |
| ACATTCTAGACCAAATGAAT+GGG | 0.470306 | 2.2:-35797192 | MS.gene067173:CDS |
| ACAAGTGATAAGGCCTCATC+TGG | 0.470489 | 2.2:+35798216 | None:intergenic |
| TTGAGGAACAAAGCTCTCAT+AGG | 0.473510 | 2.2:-35804122 | MS.gene067173:CDS |
| TCCAGGGAGCAAAAGCGGTA+TGG | 0.475210 | 2.2:-35797980 | MS.gene067173:intron |
| TGATTTCTTTGTTGAGGAGA+AGG | 0.477192 | 2.2:-35798118 | MS.gene067173:CDS |
| GAAGTGAGGATTATCGCAAT+TGG | 0.482473 | 2.2:+35804278 | None:intergenic |
| GGACTGATGCTTCATGCAAA+GGG | 0.483061 | 2.2:-35801519 | MS.gene067173:CDS |
| AAGATAGCAGGAACATGGTC+AGG | 0.484618 | 2.2:-35804369 | MS.gene067173:CDS |
| TCACAATAAAACAGAAGAAA+GGG | 0.485998 | 2.2:-35797161 | MS.gene067173:CDS |
| TCTGGAGAGACTGAACGAAT+TGG | 0.486099 | 2.2:-35797930 | MS.gene067173:CDS |
| TGCCATTGATTTCTTTGTTG+AGG | 0.486989 | 2.2:-35798124 | MS.gene067173:CDS |
| CAGGGCAGCTGCAACTGCAT+TGG | 0.489381 | 2.2:-35801786 | MS.gene067173:CDS |
| CGCCTTGAAATGGCTAGGGC+AGG | 0.494912 | 2.2:-35799099 | MS.gene067173:CDS |
| CTTATCACTTGTTATGAGCA+TGG | 0.500815 | 2.2:-35798205 | MS.gene067173:CDS |
| CATGCTCATAACAAGTGATA+AGG | 0.501636 | 2.2:+35798206 | None:intergenic |
| AGAAAGGGATGTGGAGATGG+AGG | 0.502336 | 2.2:-35797146 | MS.gene067173:CDS |
| TTCAATGTCATAATCAGTAA+AGG | 0.506090 | 2.2:+35797090 | None:intergenic |
| ATAACTCACAGTGCAACCTC+TGG | 0.506415 | 2.2:+35799015 | None:intergenic |
| GCAGGAATTGAACGTGCTCA+TGG | 0.514358 | 2.2:-35799081 | MS.gene067173:CDS |
| CTCTCTGCAGATATAGCTAA+AGG | 0.515262 | 2.2:-35797118 | MS.gene067173:CDS |
| ATTAGATGGTTATCAGATGC+TGG | 0.515816 | 2.2:-35799126 | MS.gene067173:CDS |
| ACATTGAAGTTAATATTGAA+GGG | 0.516059 | 2.2:-35797075 | MS.gene067173:CDS |
| CTCCTCAACAAAGAAATCAA+TGG | 0.519519 | 2.2:+35798122 | None:intergenic |
| TGAGCATGGGCTACACTCAA+AGG | 0.519721 | 2.2:-35798191 | MS.gene067173:CDS |
| CTGGCCAGTTGGAGAAATCA+AGG | 0.520361 | 2.2:-35798812 | MS.gene067173:CDS |
| TTATCACTTGTTATGAGCAT+GGG | 0.521383 | 2.2:-35798204 | MS.gene067173:CDS |
| GATCCACGGCCTTCTTTAAG+GGG | 0.523385 | 2.2:+35797951 | None:intergenic |
| TTGTGCTGGTAGAATTCTCA+AGG | 0.536220 | 2.2:-35804244 | MS.gene067173:CDS |
| TGAGACTAGAGCTGCTTGAA+GGG | 0.538710 | 2.2:-35798851 | MS.gene067173:CDS |
| TACATCTTGCAGGTTTGAGA+AGG | 0.539933 | 2.2:-35797728 | MS.gene067173:intron |
| AAATGATACTCAGAAGGCAT+TGG | 0.543068 | 2.2:-35797674 | MS.gene067173:CDS |
| GAGCATGGGCTACACTCAAA+GGG | 0.544631 | 2.2:-35798190 | MS.gene067173:CDS |
| TTAAGATCGAGTCAAGGAAA+AGG | 0.546564 | 2.2:-35797541 | MS.gene067173:CDS |
| AGAGCTGCTTGAAGGGGTGG+TGG | 0.548955 | 2.2:-35798844 | MS.gene067173:CDS |
| ATGGCGAAATTGAAGATAGC+AGG | 0.549751 | 2.2:-35804381 | MS.gene067173:CDS |
| GGGTCAGTCTCTTGTTGTTG+AGG | 0.549824 | 2.2:-35804139 | MS.gene067173:CDS |
| AGTGGACAGAAAGTACGCTT+AGG | 0.551971 | 2.2:-35801701 | MS.gene067173:CDS |
| TACTGCAAATTGACATGGTA+TGG | 0.553370 | 2.2:-35799170 | MS.gene067173:CDS |
| CAGGAATTGAACGTGCTCAT+GGG | 0.566377 | 2.2:-35799080 | MS.gene067173:CDS |
| TTGTGATCCAAAAGTCATTG+AGG | 0.569044 | 2.2:-35800721 | MS.gene067173:intron |
| TATGGTGCTACTTCATGCTA+CGG | 0.569586 | 2.2:-35799152 | MS.gene067173:CDS |
| TGAAGTGCTTACCATGGGAG+AGG | 0.572323 | 2.2:-35801457 | MS.gene067173:intron |
| TTTGGCAGGGCAGTAATGAT+GGG | 0.575905 | 2.2:-35801540 | MS.gene067173:intron |
| TTCATTCCAGGGAGCAAAAG+CGG | 0.576218 | 2.2:-35797985 | MS.gene067173:intron |
| TAAAACAGAAGAAAGGGATG+TGG | 0.577129 | 2.2:-35797155 | MS.gene067173:CDS |
| CTCCGCCTCAGACTCTTACA+AGG | 0.581292 | 2.2:-35799048 | MS.gene067173:CDS |
| TCTATGTTAAAGTCTTCAAG+AGG | 0.581402 | 2.2:+35801737 | None:intergenic |
| ATGGTGCTACTTCATGCTAC+GGG | 0.586062 | 2.2:-35799151 | MS.gene067173:CDS |
| CTGCAGACTCAACCATAGAC+AGG | 0.588061 | 2.2:+35797035 | None:intergenic |
| ACTAGAGCTGCTTGAAGGGG+TGG | 0.592346 | 2.2:-35798847 | MS.gene067173:CDS |
| GAAAGCGCCTTGAAATGGCT+AGG | 0.596531 | 2.2:-35799104 | MS.gene067173:CDS |
| AATTGAACGTGCTCATGGGA+AGG | 0.600472 | 2.2:-35799076 | MS.gene067173:CDS |
| GGGACTGATGCTTCATGCAA+AGG | 0.602701 | 2.2:-35801520 | MS.gene067173:CDS |
| AAAGCGCCTTGAAATGGCTA+GGG | 0.603487 | 2.2:-35799103 | MS.gene067173:CDS |
| AAATGAAAATGATACTCAGA+AGG | 0.604629 | 2.2:-35797680 | MS.gene067173:CDS |
| CAAATAAGGTTAATGAAGTG+AGG | 0.605620 | 2.2:+35804264 | None:intergenic |
| CATTGAAGTTAATATTGAAG+GGG | 0.605658 | 2.2:-35797074 | MS.gene067173:CDS |
| CGAATGAACAATCAAGATGT+TGG | 0.611105 | 2.2:-35798150 | MS.gene067173:CDS |
| GAGACTAGAGCTGCTTGAAG+GGG | 0.611311 | 2.2:-35798850 | MS.gene067173:CDS |
| TGCACTTGAAGTGCTTACCA+TGG | 0.613852 | 2.2:-35801463 | MS.gene067173:CDS |
| ATAGAAGTTGAAGATCAAAG+TGG | 0.620042 | 2.2:-35801719 | MS.gene067173:CDS |
| GTTCAGTCTCTCCAGATCCA+CGG | 0.623737 | 2.2:+35797937 | None:intergenic |
| GCACTTGAAGTGCTTACCAT+GGG | 0.624029 | 2.2:-35801462 | MS.gene067173:CDS |
| ACAAGAGACTGACCCTGTTG+AGG | 0.629157 | 2.2:+35804147 | None:intergenic |
| GACCACCTTGTAAGAGTCTG+AGG | 0.631446 | 2.2:+35799043 | None:intergenic |
| TAAGAAACTAACCTCTCCCA+TGG | 0.632027 | 2.2:+35801446 | None:intergenic |
| ATGAACAATCAAGATGTTGG+TGG | 0.639488 | 2.2:-35798147 | MS.gene067173:CDS |
| TCCAATACTGCAAATTGACA+TGG | 0.640785 | 2.2:-35799175 | MS.gene067173:CDS |
| AATTGAAGATAGCAGGAACA+TGG | 0.644813 | 2.2:-35804374 | MS.gene067173:CDS |
| ATCCACGGCCTTCTTTAAGG+GGG | 0.652056 | 2.2:+35797952 | None:intergenic |
| AAGACTGACAGCACAACCTG+AGG | 0.658542 | 2.2:-35797305 | MS.gene067173:CDS |
| CAGGGAGCAAAAGCGGTATG+GGG | 0.658721 | 2.2:-35797978 | MS.gene067173:CDS |
| ACAAGGTGGTCGCTATCCAG+AGG | 0.659802 | 2.2:-35799031 | MS.gene067173:CDS |
| ACAGCTGCAAGTGCCAGATG+AGG | 0.661882 | 2.2:-35798229 | MS.gene067173:intron |
| CGCCTCAGACTCTTACAAGG+TGG | 0.663380 | 2.2:-35799045 | MS.gene067173:CDS |
| TAAAGGTTAAGATCGAGTCA+AGG | 0.665127 | 2.2:-35797547 | MS.gene067173:intron |
| TTGGCTGAAAGGCATGCAGA+TGG | 0.670570 | 2.2:-35801767 | MS.gene067173:CDS |
| CATTCTAGACCAAATGAATG+GGG | 0.681680 | 2.2:-35797191 | MS.gene067173:CDS |
| GACTGATGCTTCATGCAAAG+GGG | 0.691968 | 2.2:-35801518 | MS.gene067173:CDS |
| CACCTTGTAAGAGTCTGAGG+CGG | 0.705300 | 2.2:+35799046 | None:intergenic |
| TAGGATCAGAGATTGATCAG+AGG | 0.717978 | 2.2:-35801682 | MS.gene067173:intron |
| ACTGTCACTTCTCCTCAACA+GGG | 0.732804 | 2.2:-35804159 | MS.gene067173:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 35797018 | 35804403 | 35797018 | ID=MS.gene067173 |
| chr2.2 | mRNA | 35797018 | 35804403 | 35797018 | ID=MS.gene067173.t1;Parent=MS.gene067173 |
| chr2.2 | exon | 35804108 | 35804403 | 35804108 | ID=MS.gene067173.t1.exon1;Parent=MS.gene067173.t1 |
| chr2.2 | CDS | 35804108 | 35804403 | 35804108 | ID=cds.MS.gene067173.t1;Parent=MS.gene067173.t1 |
| chr2.2 | exon | 35801683 | 35801805 | 35801683 | ID=MS.gene067173.t1.exon2;Parent=MS.gene067173.t1 |
| chr2.2 | CDS | 35801683 | 35801805 | 35801683 | ID=cds.MS.gene067173.t1;Parent=MS.gene067173.t1 |
| chr2.2 | exon | 35801458 | 35801554 | 35801458 | ID=MS.gene067173.t1.exon3;Parent=MS.gene067173.t1 |
| chr2.2 | CDS | 35801458 | 35801554 | 35801458 | ID=cds.MS.gene067173.t1;Parent=MS.gene067173.t1 |
| chr2.2 | exon | 35800722 | 35800757 | 35800722 | ID=MS.gene067173.t1.exon4;Parent=MS.gene067173.t1 |
| chr2.2 | CDS | 35800722 | 35800757 | 35800722 | ID=cds.MS.gene067173.t1;Parent=MS.gene067173.t1 |
| chr2.2 | exon | 35799024 | 35799211 | 35799024 | ID=MS.gene067173.t1.exon5;Parent=MS.gene067173.t1 |
| chr2.2 | CDS | 35799024 | 35799211 | 35799024 | ID=cds.MS.gene067173.t1;Parent=MS.gene067173.t1 |
| chr2.2 | exon | 35798776 | 35798878 | 35798776 | ID=MS.gene067173.t1.exon6;Parent=MS.gene067173.t1 |
| chr2.2 | CDS | 35798776 | 35798878 | 35798776 | ID=cds.MS.gene067173.t1;Parent=MS.gene067173.t1 |
| chr2.2 | exon | 35798066 | 35798247 | 35798066 | ID=MS.gene067173.t1.exon7;Parent=MS.gene067173.t1 |
| chr2.2 | CDS | 35798066 | 35798247 | 35798066 | ID=cds.MS.gene067173.t1;Parent=MS.gene067173.t1 |
| chr2.2 | exon | 35797920 | 35797997 | 35797920 | ID=MS.gene067173.t1.exon8;Parent=MS.gene067173.t1 |
| chr2.2 | CDS | 35797920 | 35797997 | 35797920 | ID=cds.MS.gene067173.t1;Parent=MS.gene067173.t1 |
| chr2.2 | exon | 35797636 | 35797738 | 35797636 | ID=MS.gene067173.t1.exon9;Parent=MS.gene067173.t1 |
| chr2.2 | CDS | 35797636 | 35797738 | 35797636 | ID=cds.MS.gene067173.t1;Parent=MS.gene067173.t1 |
| chr2.2 | exon | 35797471 | 35797564 | 35797471 | ID=MS.gene067173.t1.exon10;Parent=MS.gene067173.t1 |
| chr2.2 | CDS | 35797471 | 35797564 | 35797471 | ID=cds.MS.gene067173.t1;Parent=MS.gene067173.t1 |
| chr2.2 | exon | 35797018 | 35797373 | 35797018 | ID=MS.gene067173.t1.exon11;Parent=MS.gene067173.t1 |
| chr2.2 | CDS | 35797018 | 35797373 | 35797018 | ID=cds.MS.gene067173.t1;Parent=MS.gene067173.t1 |
| Gene Sequence |
| Protein sequence |
