Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35528.t1 | XP_013464960.1 | 94.7 | 826 | 42 | 1 | 1 | 824 | 34 | 859 | 0.00E+00 | 1552 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35528.t1 | Q9XIN0 | 38.7 | 834 | 259 | 21 | 1 | 824 | 33 | 624 | 3.2e-124 | 447.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35528.t1 | A0A072VLH4 | 94.7 | 826 | 42 | 1 | 1 | 824 | 34 | 859 | 0.0e+00 | 1552.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene35528 | 0.815827 | 7.57E-52 | -1.69E-46 |
MS.gene050689 | MS.gene35528 | 0.828015 | 1.14E-54 | -1.69E-46 |
MS.gene051363 | MS.gene35528 | 0.816535 | 5.26E-52 | -1.69E-46 |
MS.gene052609 | MS.gene35528 | 0.800316 | 1.53E-48 | -1.69E-46 |
MS.gene053226 | MS.gene35528 | 0.814894 | 1.22E-51 | -1.69E-46 |
MS.gene053541 | MS.gene35528 | 0.979868 | 6.38E-149 | -1.69E-46 |
MS.gene053542 | MS.gene35528 | 0.982026 | 4.80E-154 | -1.69E-46 |
MS.gene05364 | MS.gene35528 | 0.847009 | 1.52E-59 | -1.69E-46 |
MS.gene054142 | MS.gene35528 | 0.818554 | 1.84E-52 | -1.69E-46 |
MS.gene054651 | MS.gene35528 | 0.804918 | 1.72E-49 | -1.69E-46 |
MS.gene056254 | MS.gene35528 | 0.827012 | 1.98E-54 | -1.69E-46 |
MS.gene057082 | MS.gene35528 | 0.800895 | 1.16E-48 | -1.69E-46 |
MS.gene057132 | MS.gene35528 | 0.803684 | 3.10E-49 | -1.69E-46 |
MS.gene057694 | MS.gene35528 | 0.807814 | 4.21E-50 | -1.69E-46 |
MS.gene057855 | MS.gene35528 | 0.803838 | 2.88E-49 | -1.69E-46 |
MS.gene058009 | MS.gene35528 | 0.807745 | 4.35E-50 | -1.69E-46 |
MS.gene058292 | MS.gene35528 | 0.813226 | 2.85E-51 | -1.69E-46 |
MS.gene058634 | MS.gene35528 | 0.813136 | 2.98E-51 | -1.69E-46 |
MS.gene058781 | MS.gene35528 | 0.812204 | 4.77E-51 | -1.69E-46 |
MS.gene058783 | MS.gene35528 | 0.812307 | 4.53E-51 | -1.69E-46 |
MS.gene05978 | MS.gene35528 | 0.843262 | 1.56E-58 | -1.69E-46 |
MS.gene060355 | MS.gene35528 | 0.803117 | 4.06E-49 | -1.69E-46 |
MS.gene060933 | MS.gene35528 | 0.801783 | 7.65E-49 | -1.69E-46 |
MS.gene060935 | MS.gene35528 | 0.835462 | 1.65E-56 | -1.69E-46 |
MS.gene060937 | MS.gene35528 | 0.820681 | 6.03E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 0 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATATGTAGATTATTAGTA+AGG | + | 14536:14143-14162 | MS.gene35528:intron | 15.0% |
!! | ATATAACATCACATAATTTA+AGG | - | 14536:14588-14607 | None:intergenic | 15.0% |
!! | TATAACATCACATAATTTAA+GGG | - | 14536:14587-14606 | None:intergenic | 15.0% |
!! | TATAATCTTTAACAAAGAAA+AGG | - | 14536:11787-11806 | None:intergenic | 15.0% |
!! | TGTAGATATATAAAATTCTT+TGG | + | 14536:14309-14328 | MS.gene35528:intron | 15.0% |
!!! | AACTTTTCTTATATATGAAA+TGG | + | 14536:14612-14631 | MS.gene35528:intron | 15.0% |
!!! | AATTTTAATGATACAGATAA+TGG | + | 14536:12099-12118 | MS.gene35528:intron | 15.0% |
!!! | ATACTTTTATTATGTAAGTT+TGG | + | 14536:11804-11823 | MS.gene35528:intron | 15.0% |
!! | AGATTTGAATCAAAATTTGA+GGG | - | 14536:12433-12452 | None:intergenic | 20.0% |
!! | TGATTGTAGACTAAAATATA+TGG | + | 14536:12537-12556 | MS.gene35528:CDS | 20.0% |
!! | TGCTAATAACATCAAAAATA+AGG | - | 14536:14650-14669 | None:intergenic | 20.0% |
!! | TTCAAATCTTCAACTATAAT+AGG | - | 14536:14249-14268 | None:intergenic | 20.0% |
!! | TTTAAAAACAAACTTCTGAA+AGG | + | 14536:13087-13106 | MS.gene35528:CDS | 20.0% |
!!! | GTAGAAATTTGTAATTTTCA+GGG | + | 14536:12382-12401 | MS.gene35528:CDS | 20.0% |
!!! | TTTTATTATGTAAGTTTGGT+TGG | + | 14536:11808-11827 | MS.gene35528:intron | 20.0% |
! | AAAATTAACATGCAAAAGAG+GGG | - | 14536:14758-14777 | None:intergenic | 25.0% |
! | AAACAAGAAATATGTCGAAA+TGG | - | 14536:11321-11340 | None:intergenic | 25.0% |
! | AAACTTGTCTAGTTATGTTA+TGG | + | 14536:13997-14016 | MS.gene35528:intron | 25.0% |
! | AATGAGATAAGATATAAGAG+AGG | - | 14536:13760-13779 | None:intergenic | 25.0% |
! | AATTCAGATCTTGCATTATA+AGG | - | 14536:12472-12491 | None:intergenic | 25.0% |
! | AGCAAAATTTATCTGTAGTT+GGG | + | 14536:12563-12582 | MS.gene35528:CDS | 25.0% |
! | ATGTAGATTATTAGTAAGGA+AGG | + | 14536:14147-14166 | MS.gene35528:intron | 25.0% |
! | ATTACAAATTTCTACGCTTA+AGG | - | 14536:12377-12396 | None:intergenic | 25.0% |
! | CAAAATTAACATGCAAAAGA+GGG | - | 14536:14759-14778 | None:intergenic | 25.0% |
! | CAGATTTGAATCAAAATTTG+AGG | - | 14536:12434-12453 | None:intergenic | 25.0% |
! | TCAAAATTAACATGCAAAAG+AGG | - | 14536:14760-14779 | None:intergenic | 25.0% |
! | TTACAAATTTCTACGCTTAA+GGG | - | 14536:12376-12395 | None:intergenic | 25.0% |
! | TTTCAGTTGAGAAATGTTTA+AGG | - | 14536:12629-12648 | None:intergenic | 25.0% |
!! | ATCTAGGATTATTCATGATT+CGG | - | 14536:11949-11968 | None:intergenic | 25.0% |
!! | ATGTCATCTAAAATACTTTC+TGG | + | 14536:14779-14798 | MS.gene35528:intron | 25.0% |
!! | ATTACCTGATCACAATATTT+TGG | + | 14536:11987-12006 | MS.gene35528:intron | 25.0% |
!! | ATTGTTGTTATAACGTAGAA+TGG | + | 14536:11473-11492 | MS.gene35528:intron | 25.0% |
!! | CGTAGAAATTTGTAATTTTC+AGG | + | 14536:12381-12400 | MS.gene35528:CDS | 25.0% |
!! | GAAATGTCTAGAACAAAAAA+TGG | - | 14536:11658-11677 | None:intergenic | 25.0% |
!!! | AATACTAGTTTGCTGTTTTT+AGG | + | 14536:11570-11589 | MS.gene35528:intron | 25.0% |
!!! | AGTTCGTGGTTTTTTTTTTA+CGG | + | 14536:14545-14564 | MS.gene35528:intron | 25.0% |
!!! | ATACAGATAATGGAGAATAT+GGG | + | 14536:12109-12128 | MS.gene35528:intron | 25.0% |
!!! | TTGCTTTTACTCAGTATAAT+TGG | + | 14536:11364-11383 | MS.gene35528:intron | 25.0% |
AAACCATTAATAGTTCGGTT+CGG | + | 14536:11909-11928 | MS.gene35528:intron | 30.0% | |
AAATTAGCTGCAGATACTTT+CGG | - | 14536:12778-12797 | None:intergenic | 30.0% | |
AAGTCGTTCATTTGAAAGTT+TGG | - | 14536:12212-12231 | None:intergenic | 30.0% | |
AATAATCTAGTCATTGTTGC+AGG | + | 14536:11265-11284 | MS.gene35528:CDS | 30.0% | |
AATCTCACAATGACAAAATC+TGG | + | 14536:14466-14485 | MS.gene35528:CDS | 30.0% | |
AGATTATTAGTAAGGAAGGT+GGG | + | 14536:14151-14170 | MS.gene35528:intron | 30.0% | |
AGTGATCCATTCATACTATT+AGG | - | 14536:14950-14969 | None:intergenic | 30.0% | |
ATCTCACAATGACAAAATCT+GGG | + | 14536:14467-14486 | MS.gene35528:CDS | 30.0% | |
ATCTCTATAATCTGTTTGCT+TGG | + | 14536:14346-14365 | MS.gene35528:intron | 30.0% | |
ATCTGTTGAAGCAAACTTAA+AGG | - | 14536:12845-12864 | None:intergenic | 30.0% | |
ATGTAAGTTTGGTTGGAAAA+GGG | + | 14536:11815-11834 | MS.gene35528:intron | 30.0% | |
CAGCAAAATTTATCTGTAGT+TGG | + | 14536:12562-12581 | MS.gene35528:CDS | 30.0% | |
CATGAAAATAGTGTTTCAAC+TGG | + | 14536:13582-13601 | MS.gene35528:CDS | 30.0% | |
CTCAGTTAATGAATCAATGT+TGG | + | 14536:13215-13234 | MS.gene35528:CDS | 30.0% | |
TAACAAAGAAAAGGACTTAC+AGG | - | 14536:11778-11797 | None:intergenic | 30.0% | |
TAATAGGACAAACCATTGAT+TGG | - | 14536:14233-14252 | None:intergenic | 30.0% | |
TAGATTATTAGTAAGGAAGG+TGG | + | 14536:14150-14169 | MS.gene35528:intron | 30.0% | |
TATGTAAGTTTGGTTGGAAA+AGG | + | 14536:11814-11833 | MS.gene35528:intron | 30.0% | |
TCTTATAGTGAAGACAACAT+CGG | - | 14536:14731-14750 | None:intergenic | 30.0% | |
TGAGAAATGTTTAAGGAACT+TGG | - | 14536:12622-12641 | None:intergenic | 30.0% | |
TGCAGGAAATAAGGTTAAAA+AGG | + | 14536:13149-13168 | MS.gene35528:CDS | 30.0% | |
TGTTTAGTTGAGAGGAATAA+CGG | - | 14536:12077-12096 | None:intergenic | 30.0% | |
TTACGAGAAATTGTTCCAAA+TGG | + | 14536:13720-13739 | MS.gene35528:CDS | 30.0% | |
TTAGATTTGCAAACTTCATC+CGG | - | 14536:13621-13640 | None:intergenic | 30.0% | |
TTTGCAAATCTAATCGCAAA+AGG | + | 14536:13628-13647 | MS.gene35528:CDS | 30.0% | |
! | AACTTACAAAAACTTTTCGC+TGG | - | 14536:14684-14703 | None:intergenic | 30.0% |
! | AATAGGACAAACCATTGATT+GGG | - | 14536:14232-14251 | None:intergenic | 30.0% |
! | CAAGAAAAGCATATGCTTAA+TGG | - | 14536:13889-13908 | None:intergenic | 30.0% |
! | CGACATATTTCTTGTTTCAA+TGG | + | 14536:11324-11343 | MS.gene35528:intron | 30.0% |
! | GAAATAGCTGACTTAATAAG+AGG | + | 14536:14411-14430 | MS.gene35528:CDS | 30.0% |
! | GACAATTCAGTTTTCTGTAA+AGG | + | 14536:11837-11856 | MS.gene35528:intron | 30.0% |
! | GATGACCTGTTTGATATTTT+AGG | + | 14536:13057-13076 | MS.gene35528:CDS | 30.0% |
! | TGGAATGAATAGTCTTTTGA+GGG | + | 14536:12726-12745 | MS.gene35528:CDS | 30.0% |
! | TTATGTCCGGTAATTTTGAA+GGG | + | 14536:13397-13416 | MS.gene35528:CDS | 30.0% |
!! | AAAATTGCTGTTTAGTTGAG+AGG | - | 14536:12085-12104 | None:intergenic | 30.0% |
!! | ACATGGTTTCTTCTAAAGTA+TGG | + | 14536:14974-14993 | MS.gene35528:CDS | 30.0% |
!! | ATTTTGTTTCAAAGTCGGTT+TGG | - | 14536:13301-13320 | None:intergenic | 30.0% |
!! | GAAATTACTTTTGCTCCATT+TGG | - | 14536:13738-13757 | None:intergenic | 30.0% |
!! | GATACAGATAATGGAGAATA+TGG | + | 14536:12108-12127 | MS.gene35528:intron | 30.0% |
!! | TACTTTCTGGTTTAATTTCC+AGG | + | 14536:14792-14811 | MS.gene35528:intron | 30.0% |
!! | TCGGAATTTTGTTTCAAAGT+CGG | - | 14536:13306-13325 | None:intergenic | 30.0% |
!!! | GACAAGTTTTTTGAGATATG+AGG | - | 14536:13986-14005 | None:intergenic | 30.0% |
!!! | TTGTTTGGTTTTTCGAAGAA+TGG | + | 14536:13423-13442 | MS.gene35528:CDS | 30.0% |
AAAAGGAAACATGTCAGAAC+AGG | + | 14536:13166-13185 | MS.gene35528:CDS | 35.0% | |
AAACCGAACCGAACTATTAA+TGG | - | 14536:11915-11934 | None:intergenic | 35.0% | |
AAAGGAAACATGTCAGAACA+GGG | + | 14536:13167-13186 | MS.gene35528:CDS | 35.0% | |
AAATTTCTACGCTTAAGGGA+TGG | - | 14536:12372-12391 | None:intergenic | 35.0% | |
AACTTGGAACATTGACACAA+GGG | - | 14536:12606-12625 | None:intergenic | 35.0% | |
AAGTTTGGCAGAATAGTCTT+CGG | - | 14536:12197-12216 | None:intergenic | 35.0% | |
AATGAATCAATGTTGGACAG+TGG | + | 14536:13222-13241 | MS.gene35528:CDS | 35.0% | |
AGAAGGCCTAATAGTATGAA+TGG | + | 14536:14941-14960 | MS.gene35528:CDS | 35.0% | |
AGCAGTACTTCATTACTTAG+TGG | + | 14536:12688-12707 | MS.gene35528:CDS | 35.0% | |
ATCTTGCAGAACAACATTGA+CGG | + | 14536:13332-13351 | MS.gene35528:CDS | 35.0% | |
ATTAGGCTTAACCATCTTGA+AGG | + | 14536:14434-14453 | MS.gene35528:CDS | 35.0% | |
ATTCATACTATTAGGCCTTC+TGG | - | 14536:14942-14961 | None:intergenic | 35.0% | |
ATTGGACTTGATATTGGTCA+TGG | - | 14536:15030-15049 | None:intergenic | 35.0% | |
CAACAAGCTATCAATTGCAT+TGG | - | 14536:14902-14921 | None:intergenic | 35.0% | |
CCACACCTAAAATATCAAAC+AGG | - | 14536:13065-13084 | None:intergenic | 35.0% | |
CTTATAGTGAAGACAACATC+GGG | - | 14536:14730-14749 | None:intergenic | 35.0% | |
CTTTCAAATGAACGACTTGA+TGG | + | 14536:12214-12233 | MS.gene35528:CDS | 35.0% | |
GATAAACTATGACATGCTTC+AGG | + | 14536:12870-12889 | MS.gene35528:CDS | 35.0% | |
GGAGCAAACCATTAATAGTT+CGG | + | 14536:11904-11923 | MS.gene35528:intron | 35.0% | |
GTATCTGCAGCTAATTTATC+CGG | + | 14536:12781-12800 | MS.gene35528:CDS | 35.0% | |
TAAAAATGCATATCCACCTG+AGG | + | 14536:11438-11457 | MS.gene35528:CDS | 35.0% | |
TACTGCTAGAACTCAGATTA+TGG | - | 14536:12675-12694 | None:intergenic | 35.0% | |
TAGATTTGCAAACTTCATCC+GGG | - | 14536:13620-13639 | None:intergenic | 35.0% | |
TAGTCTACAATCACTTTGAC+CGG | - | 14536:12530-12549 | None:intergenic | 35.0% | |
TCAGATTATGGCCAAAGTTA+AGG | - | 14536:12663-12682 | None:intergenic | 35.0% | |
TCGAAGAATGGAGGTAAAAT+GGG | + | 14536:13435-13454 | MS.gene35528:CDS | 35.0% | |
TCTCAAACTACAACTGTATG+TGG | + | 14536:13516-13535 | MS.gene35528:CDS | 35.0% | |
TCTGAATTCAACAACTTTGC+CGG | + | 14536:12484-12503 | MS.gene35528:CDS | 35.0% | |
TGAATCATTTGGCGATCTTT+AGG | - | 14536:13684-13703 | None:intergenic | 35.0% | |
TGACACGATCTTGAATCATT+TGG | - | 14536:13695-13714 | None:intergenic | 35.0% | |
TGCACATACACACACAAATT+TGG | + | 14536:14049-14068 | MS.gene35528:intron | 35.0% | |
TGTTCTGCAAGATATGTCAT+CGG | - | 14536:13325-13344 | None:intergenic | 35.0% | |
TTAGGCTTAACCATCTTGAA+GGG | + | 14536:14435-14454 | MS.gene35528:CDS | 35.0% | |
TTATAACTCTTTACCCCAGA+AGG | + | 14536:14924-14943 | MS.gene35528:CDS | 35.0% | |
TTATAGTGAAGACAACATCG+GGG | - | 14536:14729-14748 | None:intergenic | 35.0% | |
TTCATACTATTAGGCCTTCT+GGG | - | 14536:14941-14960 | None:intergenic | 35.0% | |
TTCATTACTTAGTGGAATCC+CGG | + | 14536:12696-12715 | MS.gene35528:CDS | 35.0% | |
TTCGAAGAATGGAGGTAAAA+TGG | + | 14536:13434-13453 | MS.gene35528:CDS | 35.0% | |
! | AAACACATAACTGGTCTGTT+CGG | + | 14536:11879-11898 | MS.gene35528:intron | 35.0% |
! | CTGTAGAAACTAGTTCTCTA+AGG | + | 14536:13460-13479 | MS.gene35528:CDS | 35.0% |
! | CTTCAAGATTAGTCAGTACA+TGG | - | 14536:14527-14546 | None:intergenic | 35.0% |
! | GCTGACTTAATAAGAGGATT+AGG | + | 14536:14417-14436 | MS.gene35528:CDS | 35.0% |
! | GTGGAATGAATAGTCTTTTG+AGG | + | 14536:12725-12744 | MS.gene35528:CDS | 35.0% |
! | GTTATGTCCGGTAATTTTGA+AGG | + | 14536:13396-13415 | MS.gene35528:CDS | 35.0% |
! | GTTTAATTTCCAGGCAAACA+GGG | + | 14536:14801-14820 | MS.gene35528:intron | 35.0% |
! | GTTTTCTGTAAAGGTAGTTC+TGG | + | 14536:11846-11865 | MS.gene35528:intron | 35.0% |
! | TAGTCAGTACATGGCTTTTA+TGG | - | 14536:14518-14537 | None:intergenic | 35.0% |
! | TGAATGGATCACTTGTTACA+TGG | + | 14536:14957-14976 | MS.gene35528:CDS | 35.0% |
!! | AATTTTGAAGGGGGATTGTT+TGG | + | 14536:13408-13427 | MS.gene35528:CDS | 35.0% |
!! | ACAGAGACACAAATTTGTTG+AGG | + | 14536:14081-14100 | MS.gene35528:intron | 35.0% |
!! | ATTCATGATTCGGTTCAGAA+AGG | - | 14536:11939-11958 | None:intergenic | 35.0% |
!! | CATCTTTTTGAAAGCAATCG+CGG | - | 14536:12963-12982 | None:intergenic | 35.0% |
!! | CCTGTTTGATATTTTAGGTG+TGG | + | 14536:13062-13081 | MS.gene35528:CDS | 35.0% |
!! | TAATTTTCAGGGTAGAGTTG+TGG | + | 14536:12393-12412 | MS.gene35528:CDS | 35.0% |
!! | TATGTCCGGTAATTTTGAAG+GGG | + | 14536:13398-13417 | MS.gene35528:CDS | 35.0% |
!!! | CCTGATCACAATATTTTGGT+CGG | + | 14536:11991-12010 | MS.gene35528:intron | 35.0% |
!!! | GTTTTGAAAGACAACTTCGA+GGG | + | 14536:14177-14196 | MS.gene35528:CDS | 35.0% |
!!! | TTTGGTTTTTCGAAGAATGG+AGG | + | 14536:13426-13445 | MS.gene35528:CDS | 35.0% |
AACAGACCACCTATTAGATG+CGG | + | 14536:13263-13282 | MS.gene35528:CDS | 40.0% | |
AATCGCAAAAGGCTTAAACC+AGG | + | 14536:13639-13658 | MS.gene35528:CDS | 40.0% | |
AATTTATCCGGAGCACAAGT+TGG | + | 14536:12793-12812 | MS.gene35528:CDS | 40.0% | |
ACAGACAGAAGCCTTAACTT+TGG | + | 14536:12649-12668 | MS.gene35528:CDS | 40.0% | |
ACAGATGAATCAACAGACGA+AGG | - | 14536:12259-12278 | None:intergenic | 40.0% | |
ACATCCCAACAATGTCATGA+GGG | - | 14536:11129-11148 | None:intergenic | 40.0% | |
ACTATTCGGCAAATACTCCT+CGG | - | 14536:12920-12939 | None:intergenic | 40.0% | |
ACTCAGTATAATTGGACGCT+CGG | + | 14536:11372-11391 | MS.gene35528:intron | 40.0% | |
AGATGGCAATGCAGGAAATA+AGG | + | 14536:13140-13159 | MS.gene35528:CDS | 40.0% | |
ATACTCCTCGGGATTAAAAG+AGG | - | 14536:12908-12927 | None:intergenic | 40.0% | |
ATTCTTACAGATGCTTTGCG+AGG | + | 14536:14371-14390 | MS.gene35528:intron | 40.0% | |
ATTTATCCGGAGCACAAGTT+GGG | + | 14536:12794-12813 | MS.gene35528:CDS | 40.0% | |
CAATAATAGCTTCGTACCTC+AGG | - | 14536:11457-11476 | None:intergenic | 40.0% | |
CAATCCCCCTTCAAAATTAC+CGG | - | 14536:13406-13425 | None:intergenic | 40.0% | |
CAGCATGAGATGAATAACTC+TGG | - | 14536:12327-12346 | None:intergenic | 40.0% | |
CATTTACCAACAGTCATGAG+TGG | + | 14536:11395-11414 | MS.gene35528:CDS | 40.0% | |
CCAATTTGAACAACTCCATG+AGG | - | 14536:11745-11764 | None:intergenic | 40.0% | |
CCGACCAAAATATTGTGATC+AGG | - | 14536:11994-12013 | None:intergenic | 40.0% | |
CCTCATGGAGTTGTTCAAAT+TGG | + | 14536:11742-11761 | MS.gene35528:CDS | 40.0% | |
CGCGATTGCTTTCAAAAAGA+TGG | + | 14536:12961-12980 | MS.gene35528:CDS | 40.0% | |
CGCTGTCATCATAGATTGAA+TGG | - | 14536:12989-13008 | None:intergenic | 40.0% | |
CTATTCATTCCACCATGTAC+CGG | - | 14536:12718-12737 | None:intergenic | 40.0% | |
CTGACTAATCTTGAAGTTCG+TGG | + | 14536:14531-14550 | MS.gene35528:intron | 40.0% | |
GAACTTGGAACATTGACACA+AGG | - | 14536:12607-12626 | None:intergenic | 40.0% | |
GATGCTAATCGAGGTAATGA+TGG | + | 14536:14281-14300 | MS.gene35528:intron | 40.0% | |
GCACAAGCTTCTTCATGTTT+AGG | - | 14536:13015-13034 | None:intergenic | 40.0% | |
GGAGGATAAAGTCTCTTCTT+TGG | + | 14536:11225-11244 | MS.gene35528:CDS | 40.0% | |
GTATGTAAGCAGGTTATGTC+CGG | + | 14536:13384-13403 | MS.gene35528:CDS | 40.0% | |
TACTCCTCGGGATTAAAAGA+GGG | - | 14536:12907-12926 | None:intergenic | 40.0% | |
TAGGCTTAACCATCTTGAAG+GGG | + | 14536:14436-14455 | MS.gene35528:CDS | 40.0% | |
TAGTCATTGTTGCAGGTGAA+GGG | + | 14536:11272-11291 | MS.gene35528:CDS | 40.0% | |
TATTCATTCCACCATGTACC+GGG | - | 14536:12717-12736 | None:intergenic | 40.0% | |
TCATACTATTAGGCCTTCTG+GGG | - | 14536:14940-14959 | None:intergenic | 40.0% | |
TCATCTAGGAATTCAAGAGG+AGG | + | 14536:11207-11226 | MS.gene35528:CDS | 40.0% | |
TCCTCTTGAATTCCTAGATG+AGG | - | 14536:11208-11227 | None:intergenic | 40.0% | |
TCTTGCAGAACAACATTGAC+GGG | + | 14536:13333-13352 | MS.gene35528:CDS | 40.0% | |
TGTGATCAGGTAATAACGCA+AGG | - | 14536:11981-12000 | None:intergenic | 40.0% | |
! | ATGCATGACCAATTTTCAGC+TGG | + | 14536:11604-11623 | MS.gene35528:CDS | 40.0% |
! | CTGTTTGCTGATGAATCAGA+TGG | + | 14536:13123-13142 | MS.gene35528:CDS | 40.0% |
! | CTTGATGGATCTTCTACTTC+TGG | + | 14536:12229-12248 | MS.gene35528:CDS | 40.0% |
! | GGATGGAGTGTTTGAACATT+AGG | - | 14536:12355-12374 | None:intergenic | 40.0% |
! | GGTTTAATTTCCAGGCAAAC+AGG | + | 14536:14800-14819 | MS.gene35528:intron | 40.0% |
! | TCTCGGATTGGACTTGATAT+TGG | - | 14536:15036-15055 | None:intergenic | 40.0% |
! | TTAGAGCCATTGACTACTGA+AGG | - | 14536:12301-12320 | None:intergenic | 40.0% |
!! | ATGTCCGGTAATTTTGAAGG+GGG | + | 14536:13399-13418 | MS.gene35528:CDS | 40.0% |
!! | CTGTAAAGGTAGTTCTGGTT+CGG | + | 14536:11851-11870 | MS.gene35528:intron | 40.0% |
!! | GAAACTAGTTCTCTAAGGTC+TGG | + | 14536:13465-13484 | MS.gene35528:CDS | 40.0% |
!! | TCGGTTTGGAAACACATAAC+TGG | + | 14536:11870-11889 | MS.gene35528:intron | 40.0% |
!! | TCTTCGGATAGAAGAGCATT+GGG | - | 14536:12181-12200 | None:intergenic | 40.0% |
!!! | GGTTTTGAAAGACAACTTCG+AGG | + | 14536:14176-14195 | MS.gene35528:CDS | 40.0% |
!!! | TGGACAGTGGCATTTTTTCT+GGG | + | 14536:13235-13254 | MS.gene35528:CDS | 40.0% |
!!! | TTGGACAGTGGCATTTTTTC+TGG | + | 14536:13234-13253 | MS.gene35528:CDS | 40.0% |
AACCATCTTGAAGGGGGTAA+TGG | + | 14536:14443-14462 | MS.gene35528:CDS | 45.0% | |
AACCTGCTTACATACACGAG+AGG | - | 14536:13379-13398 | None:intergenic | 45.0% | |
AACTGGATACTCTAAACGCC+CGG | + | 14536:13599-13618 | MS.gene35528:CDS | 45.0% | |
ACATACACGAGAGGGAATAG+AGG | - | 14536:13370-13389 | None:intergenic | 45.0% | |
ACCTGCTTACATACACGAGA+GGG | - | 14536:13378-13397 | None:intergenic | 45.0% | |
ACTCCTCGGGATTAAAAGAG+GGG | - | 14536:12906-12925 | None:intergenic | 45.0% | |
AGGCTTAACCATCTTGAAGG+GGG | + | 14536:14437-14456 | MS.gene35528:CDS | 45.0% | |
ATGAGGGGAAGGACATGAAA+TGG | - | 14536:11113-11132 | None:intergenic | 45.0% | |
ATTAGATGCGGTGGTCTCAA+CGG | + | 14536:13275-13294 | MS.gene35528:CDS | 45.0% | |
ATTTGGCGATCTTTAGGTCG+AGG | - | 14536:13678-13697 | None:intergenic | 45.0% | |
CAAGTCCAATCCGAGATTTC+AGG | + | 14536:15040-15059 | MS.gene35528:CDS | 45.0% | |
CAGCAAACAGTTCATTCCAG+TGG | - | 14536:13113-13132 | None:intergenic | 45.0% | |
CATCCCAACAATGTCATGAG+GGG | - | 14536:11128-11147 | None:intergenic | 45.0% | |
CCGACAAGCTGAAACAAAAC+GGG | + | 14536:13928-13947 | MS.gene35528:CDS | 45.0% | |
CCTGCATTCCAGCTGAAAAT+TGG | - | 14536:11615-11634 | None:intergenic | 45.0% | |
CCTGGGATATGACCACTATT+CGG | - | 14536:12934-12953 | None:intergenic | 45.0% | |
CGACAAGCTGAAACAAAACG+GGG | + | 14536:13929-13948 | MS.gene35528:CDS | 45.0% | |
CGCAAGGATATCACTGATCT+AGG | - | 14536:11965-11984 | None:intergenic | 45.0% | |
CTAGTCATTGTTGCAGGTGA+AGG | + | 14536:11271-11290 | MS.gene35528:CDS | 45.0% | |
CTATTCGGCAAATACTCCTC+GGG | - | 14536:12919-12938 | None:intergenic | 45.0% | |
CTCTCAACTTAGTTCGTGGT+TGG | + | 14536:13539-13558 | MS.gene35528:CDS | 45.0% | |
CTTAGTTCGTGGTTGGAGAA+TGG | + | 14536:13546-13565 | MS.gene35528:CDS | 45.0% | |
CTTCCCCTCATGACATTGTT+GGG | + | 14536:11122-11141 | MS.gene35528:CDS | 45.0% | |
CTTGCAGAACAACATTGACG+GGG | + | 14536:13334-13353 | MS.gene35528:CDS | 45.0% | |
CTTTGACCGGATTGACCAAA+CGG | - | 14536:12517-12536 | None:intergenic | 45.0% | |
GAAACAAAACGGGGAGTCTA+AGG | + | 14536:13938-13957 | MS.gene35528:CDS | 45.0% | |
GACATCCCAACAATGTCATG+AGG | - | 14536:11130-11149 | None:intergenic | 45.0% | |
GACTTTCAATCGCCTCATCT+AGG | + | 14536:11193-11212 | MS.gene35528:CDS | 45.0% | |
GAGAATCCACTCATGACTGT+TGG | - | 14536:11404-11423 | None:intergenic | 45.0% | |
GATGAATCAGATGGCAATGC+AGG | + | 14536:13132-13151 | MS.gene35528:CDS | 45.0% | |
GCCGACAAGCTGAAACAAAA+CGG | + | 14536:13927-13946 | MS.gene35528:CDS | 45.0% | |
GCCTCATCTAGGAATTCAAG+AGG | + | 14536:11204-11223 | MS.gene35528:CDS | 45.0% | |
GTTAAGACCGCCTGAAATCT+CGG | - | 14536:15053-15072 | None:intergenic | 45.0% | |
GTTATTCCTGTGCTTCCTCA+TGG | + | 14536:11727-11746 | MS.gene35528:CDS | 45.0% | |
TAATAGCTTCGTACCTCAGG+TGG | - | 14536:11454-11473 | None:intergenic | 45.0% | |
TACAGATGCTTTGCGAGGAA+CGG | + | 14536:14376-14395 | MS.gene35528:intron | 45.0% | |
TATGTCACTCGTTCGTCTTC+TGG | + | 14536:14846-14865 | MS.gene35528:CDS | 45.0% | |
TATTAGTAAGGAAGGTGGGC+TGG | + | 14536:14155-14174 | MS.gene35528:CDS | 45.0% | |
TCGAATTTGCCGAATCCGAA+CGG | + | 14536:11148-11167 | MS.gene35528:CDS | 45.0% | |
TCTGGTTGTAGCAAGGATGA+TGG | + | 14536:13483-13502 | MS.gene35528:CDS | 45.0% | |
TGAAAGACAACTTCGAGGGA+GGG | + | 14536:14181-14200 | MS.gene35528:CDS | 45.0% | |
TGAGGGGAAGGACATGAAAT+GGG | - | 14536:11112-11131 | None:intergenic | 45.0% | |
TTAAACCAGGAGAGAATCCC+AGG | + | 14536:13652-13671 | MS.gene35528:CDS | 45.0% | |
TTCATTCCCAACTTGTGCTC+CGG | - | 14536:12803-12822 | None:intergenic | 45.0% | |
TTCCATTACCCCCTTCAAGA+TGG | - | 14536:14448-14467 | None:intergenic | 45.0% | |
TTGAAAGACAACTTCGAGGG+AGG | + | 14536:14180-14199 | MS.gene35528:CDS | 45.0% | |
TTGAGACCACCGCATCTAAT+AGG | - | 14536:13275-13294 | None:intergenic | 45.0% | |
! | AAAACGGGGAGTCTAAGGTA+TGG | + | 14536:13943-13962 | MS.gene35528:intron | 45.0% |
! | ACAAACTTCTGAAAGGCCAC+TGG | + | 14536:13094-13113 | MS.gene35528:CDS | 45.0% |
! | ACATAACTGGTCTGTTCGGT+TGG | + | 14536:11883-11902 | MS.gene35528:intron | 45.0% |
! | CAGTCATGAGTGGATTCTCT+TGG | + | 14536:11405-11424 | MS.gene35528:CDS | 45.0% |
! | CCAATTTTCAGCTGGAATGC+AGG | + | 14536:11612-11631 | MS.gene35528:CDS | 45.0% |
! | GTCTTCGGATAGAAGAGCAT+TGG | - | 14536:12182-12201 | None:intergenic | 45.0% |
! | TCTAAGGTCTGGTTGTAGCA+AGG | + | 14536:13476-13495 | MS.gene35528:CDS | 45.0% |
!! | AAGGTAGTTCTGGTTCGGTT+TGG | + | 14536:11856-11875 | MS.gene35528:intron | 45.0% |
!! | CTTCTGGAGCAAACGATGAA+GGG | + | 14536:14862-14881 | MS.gene35528:CDS | 45.0% |
!! | GAGGAGTATTTGCCGAATAG+TGG | + | 14536:12919-12938 | MS.gene35528:CDS | 45.0% |
!! | TCTTCTGGAGCAAACGATGA+AGG | + | 14536:14861-14880 | MS.gene35528:CDS | 45.0% |
!! | TTTTCAGGGTAGAGTTGTGG+AGG | + | 14536:12396-12415 | MS.gene35528:CDS | 45.0% |
!!! | CCCGTTTTGTTTCAGCTTGT+CGG | - | 14536:13931-13950 | None:intergenic | 45.0% |
!!! | TTTTTTTTTTTTTAAAAATC+TGG | - | 14536:13783-13802 | None:intergenic | 5.0% |
AAACAGGGACGTAACGAGGA+TGG | + | 14536:14816-14835 | MS.gene35528:CDS | 50.0% | |
AACAGGTCATCACCACCTGA+TGG | - | 14536:13048-13067 | None:intergenic | 50.0% | |
AAGAGCCTGATCTTGCAGCT+CGG | + | 14536:12148-12167 | MS.gene35528:CDS | 50.0% | |
AAGCAATCGCGGACAAAACC+TGG | - | 14536:12952-12971 | None:intergenic | 50.0% | |
ACAGATGCTTTGCGAGGAAC+GGG | + | 14536:14377-14396 | MS.gene35528:intron | 50.0% | |
ACCTCGATTAGCATCTGACG+AGG | - | 14536:14276-14295 | None:intergenic | 50.0% | |
AGACCACCGCATCTAATAGG+TGG | - | 14536:13272-13291 | None:intergenic | 50.0% | |
AGACCACCTATTAGATGCGG+TGG | + | 14536:13266-13285 | MS.gene35528:CDS | 50.0% | |
AGCAATCGCGGACAAAACCT+GGG | - | 14536:12951-12970 | None:intergenic | 50.0% | |
CATTGTTGCAGGTGAAGGGT+AGG | + | 14536:11276-11295 | MS.gene35528:intron | 50.0% | |
CCAACAATGTCATGAGGGGA+AGG | - | 14536:11124-11143 | None:intergenic | 50.0% | |
CCGAATAGTGGTCATATCCC+AGG | + | 14536:12931-12950 | MS.gene35528:CDS | 50.0% | |
CCTTCCCCTCATGACATTGT+TGG | + | 14536:11121-11140 | MS.gene35528:CDS | 50.0% | |
CGAATTTGCCGAATCCGAAC+GGG | + | 14536:11149-11168 | MS.gene35528:CDS | 50.0% | |
CTGGGCACGTTTCATTGTTG+AGG | + | 14536:14485-14504 | MS.gene35528:CDS | 50.0% | |
CTTAGTGGAATCCCGGTACA+TGG | + | 14536:12703-12722 | MS.gene35528:CDS | 50.0% | |
GAAAGACAACTTCGAGGGAG+GGG | + | 14536:14182-14201 | MS.gene35528:CDS | 50.0% | |
GAATTTGCCGAATCCGAACG+GGG | + | 14536:11150-11169 | MS.gene35528:CDS | 50.0% | |
GCATAGATGCACTGCTGGAA+CGG | + | 14536:13862-13881 | MS.gene35528:CDS | 50.0% | |
GCTACATGGGCATATGAGGT+TGG | + | 14536:14204-14223 | MS.gene35528:CDS | 50.0% | |
GGAAACATGTCAGAACAGGG+AGG | + | 14536:13170-13189 | MS.gene35528:CDS | 50.0% | |
GTCCAATCCGAGATTTCAGG+CGG | + | 14536:15043-15062 | MS.gene35528:CDS | 50.0% | |
GTGGCTCTCAACTTAGTTCG+TGG | + | 14536:13535-13554 | MS.gene35528:CDS | 50.0% | |
GTGTAGCATAGATGCACTGC+TGG | + | 14536:13857-13876 | MS.gene35528:intron | 50.0% | |
TACACGAGAGGGAATAGAGG+CGG | - | 14536:13367-13386 | None:intergenic | 50.0% | |
TACTGAAGGAGCGGAATTCG+AGG | - | 14536:12287-12306 | None:intergenic | 50.0% | |
TCCCTCTCGTGTATGTAAGC+AGG | + | 14536:13374-13393 | MS.gene35528:CDS | 50.0% | |
TCCGCTCCTTCAGTAGTCAA+TGG | + | 14536:12292-12311 | MS.gene35528:CDS | 50.0% | |
TCCTCGTCAGATGCTAATCG+AGG | + | 14536:14272-14291 | MS.gene35528:CDS | 50.0% | |
TGTGCTCAACAACCTCCATC+AGG | + | 14536:13030-13049 | MS.gene35528:CDS | 50.0% | |
! | ACAACTCCATGAGGAAGCAC+AGG | - | 14536:11736-11755 | None:intergenic | 50.0% |
! | CATCCCCTCTTTTAATCCCG+AGG | + | 14536:12900-12919 | MS.gene35528:CDS | 50.0% |
! | GCCATTGACTACTGAAGGAG+CGG | - | 14536:12296-12315 | None:intergenic | 50.0% |
! | GGTTGTAGCAAGGATGATGG+TGG | + | 14536:13486-13505 | MS.gene35528:CDS | 50.0% |
! | TGAGGTTGGCTCCCAATCAA+TGG | + | 14536:14218-14237 | MS.gene35528:CDS | 50.0% |
AGAGCCTGATCTTGCAGCTC+GGG | + | 14536:12149-12168 | MS.gene35528:CDS | 55.0% | |
AGGCAAACAGGGACGTAACG+AGG | + | 14536:14812-14831 | MS.gene35528:intron | 55.0% | |
AGGGGCTACATGGGCATATG+AGG | + | 14536:14200-14219 | MS.gene35528:CDS | 55.0% | |
AGGTCATCACCACCTGATGG+AGG | - | 14536:13045-13064 | None:intergenic | 55.0% | |
AGTGGAATCCCGGTACATGG+TGG | + | 14536:12706-12725 | MS.gene35528:CDS | 55.0% | |
CAGATGCTTTGCGAGGAACG+GGG | + | 14536:14378-14397 | MS.gene35528:intron | 55.0% | |
CGAGGAACGGGGTTTCTTTC+TGG | + | 14536:14389-14408 | MS.gene35528:CDS | 55.0% | |
CGATCTTTAGGTCGAGGCCT+GGG | - | 14536:13672-13691 | None:intergenic | 55.0% | |
GACCGCCTGAAATCTCGGAT+TGG | - | 14536:15048-15067 | None:intergenic | 55.0% | |
GCTCAACAACCTCCATCAGG+TGG | + | 14536:13033-13052 | MS.gene35528:CDS | 55.0% | |
TACACCCGAGCTGCAAGATC+AGG | - | 14536:12156-12175 | None:intergenic | 55.0% | |
TCGTTACGTCCCTGTTTGCC+TGG | - | 14536:14813-14832 | None:intergenic | 55.0% | |
TCTGCGCCGTTTGGTCAATC+CGG | + | 14536:12508-12527 | MS.gene35528:CDS | 55.0% | |
TTGACCAAACGGCGCAGAAC+CGG | - | 14536:12506-12525 | None:intergenic | 55.0% | |
AACCAACTCCCGTCCCCGTT+CGG | - | 14536:11166-11185 | None:intergenic | 60.0% | |
ACTTCGAGGGAGGGGCTACA+TGG | + | 14536:14190-14209 | MS.gene35528:CDS | 60.0% | |
CTTCGAGGGAGGGGCTACAT+GGG | + | 14536:14191-14210 | MS.gene35528:CDS | 60.0% | |
GCGATCTTTAGGTCGAGGCC+TGG | - | 14536:13673-13692 | None:intergenic | 60.0% | |
TTGCCGAATCCGAACGGGGA+CGG | + | 14536:11154-11173 | MS.gene35528:CDS | 60.0% | |
!! | TTTGCCGGTTCTGCGCCGTT+TGG | + | 14536:12499-12518 | MS.gene35528:CDS | 60.0% |
ATCCGAACGGGGACGGGAGT+TGG | + | 14536:11161-11180 | MS.gene35528:CDS | 65.0% | |
CGAGGCCTGGGATTCTCTCC+TGG | - | 14536:13660-13679 | None:intergenic | 65.0% | |
CTCCCGTCCCCGTTCGGATT+CGG | - | 14536:11160-11179 | None:intergenic | 65.0% | |
TGCCGAATCCGAACGGGGAC+GGG | + | 14536:11155-11174 | MS.gene35528:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
14536 | gene | 11078 | 15081 | 11078 | ID=MS.gene35528 |
14536 | mRNA | 11078 | 15081 | 11078 | ID=MS.gene35528.t1;Parent=MS.gene35528 |
14536 | exon | 11078 | 11293 | 11078 | ID=MS.gene35528.t1.exon1;Parent=MS.gene35528.t1 |
14536 | CDS | 11078 | 11293 | 11078 | ID=cds.MS.gene35528.t1;Parent=MS.gene35528.t1 |
14536 | exon | 11378 | 11459 | 11378 | ID=MS.gene35528.t1.exon2;Parent=MS.gene35528.t1 |
14536 | CDS | 11378 | 11459 | 11378 | ID=cds.MS.gene35528.t1;Parent=MS.gene35528.t1 |
14536 | exon | 11592 | 11633 | 11592 | ID=MS.gene35528.t1.exon3;Parent=MS.gene35528.t1 |
14536 | CDS | 11592 | 11633 | 11592 | ID=cds.MS.gene35528.t1;Parent=MS.gene35528.t1 |
14536 | exon | 11718 | 11777 | 11718 | ID=MS.gene35528.t1.exon4;Parent=MS.gene35528.t1 |
14536 | CDS | 11718 | 11777 | 11718 | ID=cds.MS.gene35528.t1;Parent=MS.gene35528.t1 |
14536 | exon | 12115 | 13749 | 12115 | ID=MS.gene35528.t1.exon5;Parent=MS.gene35528.t1 |
14536 | CDS | 12115 | 13749 | 12115 | ID=cds.MS.gene35528.t1;Parent=MS.gene35528.t1 |
14536 | exon | 13858 | 13959 | 13858 | ID=MS.gene35528.t1.exon6;Parent=MS.gene35528.t1 |
14536 | CDS | 13858 | 13959 | 13858 | ID=cds.MS.gene35528.t1;Parent=MS.gene35528.t1 |
14536 | exon | 14153 | 14293 | 14153 | ID=MS.gene35528.t1.exon7;Parent=MS.gene35528.t1 |
14536 | CDS | 14153 | 14293 | 14153 | ID=cds.MS.gene35528.t1;Parent=MS.gene35528.t1 |
14536 | exon | 14381 | 14506 | 14381 | ID=MS.gene35528.t1.exon8;Parent=MS.gene35528.t1 |
14536 | CDS | 14381 | 14506 | 14381 | ID=cds.MS.gene35528.t1;Parent=MS.gene35528.t1 |
14536 | exon | 14814 | 14883 | 14814 | ID=MS.gene35528.t1.exon9;Parent=MS.gene35528.t1 |
14536 | CDS | 14814 | 14883 | 14814 | ID=cds.MS.gene35528.t1;Parent=MS.gene35528.t1 |
14536 | exon | 14915 | 15081 | 14915 | ID=MS.gene35528.t1.exon10;Parent=MS.gene35528.t1 |
14536 | CDS | 14915 | 15081 | 14915 | ID=cds.MS.gene35528.t1;Parent=MS.gene35528.t1 |
Gene Sequence |
Protein sequence |