Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34232.t1 | XP_003628552.1 | 97.5 | 526 | 13 | 0 | 1 | 526 | 1 | 526 | 1.70E-281 | 978 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34232.t1 | Q16401 | 21.1 | 460 | 325 | 13 | 55 | 507 | 62 | 490 | 6.4e-11 | 70.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34232.t1 | G7LDS0 | 97.5 | 526 | 13 | 0 | 1 | 526 | 1 | 526 | 1.2e-281 | 978.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene34232 | 0.832298 | 1.02E-55 | -1.69E-46 |
| MS.gene049159 | MS.gene34232 | 0.813205 | 2.88E-51 | -1.69E-46 |
| MS.gene04918 | MS.gene34232 | 0.806168 | 9.38E-50 | -1.69E-46 |
| MS.gene049190 | MS.gene34232 | 0.841652 | 4.17E-58 | -1.69E-46 |
| MS.gene049254 | MS.gene34232 | 0.82448 | 7.89E-54 | -1.69E-46 |
| MS.gene049255 | MS.gene34232 | 0.819243 | 1.29E-52 | -1.69E-46 |
| MS.gene049341 | MS.gene34232 | 0.818489 | 1.91E-52 | -1.69E-46 |
| MS.gene049368 | MS.gene34232 | 0.820157 | 7.96E-53 | -1.69E-46 |
| MS.gene049404 | MS.gene34232 | 0.850283 | 1.88E-60 | -1.69E-46 |
| MS.gene049711 | MS.gene34232 | 0.827856 | 1.24E-54 | -1.69E-46 |
| MS.gene049807 | MS.gene34232 | 0.824948 | 6.12E-54 | -1.69E-46 |
| MS.gene049808 | MS.gene34232 | 0.823332 | 1.47E-53 | -1.69E-46 |
| MS.gene049824 | MS.gene34232 | 0.852504 | 4.42E-61 | -1.69E-46 |
| MS.gene049825 | MS.gene34232 | 0.818714 | 1.70E-52 | -1.69E-46 |
| MS.gene049850 | MS.gene34232 | 0.808017 | 3.81E-50 | -1.69E-46 |
| MS.gene049863 | MS.gene34232 | 0.803416 | 3.52E-49 | -1.69E-46 |
| MS.gene049873 | MS.gene34232 | 0.822198 | 2.69E-53 | -1.69E-46 |
| MS.gene049983 | MS.gene34232 | 0.810566 | 1.08E-50 | -1.69E-46 |
| MS.gene05016 | MS.gene34232 | 0.813615 | 2.34E-51 | -1.69E-46 |
| MS.gene050273 | MS.gene34232 | 0.822934 | 1.82E-53 | -1.69E-46 |
| MS.gene050384 | MS.gene34232 | 0.824233 | 9.02E-54 | -1.69E-46 |
| MS.gene050386 | MS.gene34232 | 0.806105 | 9.67E-50 | -1.69E-46 |
| MS.gene050414 | MS.gene34232 | 0.809341 | 1.99E-50 | -1.69E-46 |
| MS.gene050551 | MS.gene34232 | 0.827132 | 1.85E-54 | -1.69E-46 |
| MS.gene050559 | MS.gene34232 | 0.87086 | 1.06E-66 | -1.69E-46 |
| MS.gene050561 | MS.gene34232 | 0.862865 | 3.74E-64 | -1.69E-46 |
| MS.gene050562 | MS.gene34232 | 0.854281 | 1.37E-61 | -1.69E-46 |
| MS.gene050646 | MS.gene34232 | 0.815175 | 1.06E-51 | -1.69E-46 |
| MS.gene050689 | MS.gene34232 | 0.871802 | 5.18E-67 | -1.69E-46 |
| MS.gene050807 | MS.gene34232 | 0.82195 | 3.07E-53 | -1.69E-46 |
| MS.gene050877 | MS.gene34232 | 0.808035 | 3.77E-50 | -1.69E-46 |
| MS.gene050901 | MS.gene34232 | 0.826611 | 2.47E-54 | -1.69E-46 |
| MS.gene050945 | MS.gene34232 | 0.829821 | 4.15E-55 | -1.69E-46 |
| MS.gene051234 | MS.gene34232 | 0.813949 | 1.98E-51 | -1.69E-46 |
| MS.gene051279 | MS.gene34232 | 0.867408 | 1.40E-65 | -1.69E-46 |
| MS.gene051328 | MS.gene34232 | 0.806623 | 7.52E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene34232 | 0.808773 | 2.63E-50 | -1.69E-46 |
| MS.gene051363 | MS.gene34232 | 0.812885 | 3.38E-51 | -1.69E-46 |
| MS.gene051365 | MS.gene34232 | 0.813411 | 2.59E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene34232 | 0.813376 | 2.64E-51 | -1.69E-46 |
| MS.gene051628 | MS.gene34232 | 0.825957 | 3.53E-54 | -1.69E-46 |
| MS.gene051701 | MS.gene34232 | 0.812476 | 4.16E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene34232 | 0.831733 | 1.41E-55 | -1.69E-46 |
| MS.gene051720 | MS.gene34232 | 0.832724 | 8.03E-56 | -1.69E-46 |
| MS.gene051744 | MS.gene34232 | 0.850908 | 1.25E-60 | -1.69E-46 |
| MS.gene051957 | MS.gene34232 | 0.801253 | 9.82E-49 | -1.69E-46 |
| MS.gene052030 | MS.gene34232 | 0.802729 | 4.89E-49 | -1.69E-46 |
| MS.gene052036 | MS.gene34232 | 0.808375 | 3.20E-50 | -1.69E-46 |
| MS.gene052072 | MS.gene34232 | 0.84256 | 2.40E-58 | -1.69E-46 |
| MS.gene052108 | MS.gene34232 | 0.803802 | 2.93E-49 | -1.69E-46 |
| MS.gene052239 | MS.gene34232 | -0.841788 | 3.84E-58 | -1.69E-46 |
| MS.gene052307 | MS.gene34232 | 0.833578 | 4.92E-56 | -1.69E-46 |
| MS.gene052463 | MS.gene34232 | 0.807999 | 3.84E-50 | -1.69E-46 |
| MS.gene052514 | MS.gene34232 | 0.809421 | 1.91E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene34232 | 0.84779 | 9.25E-60 | -1.69E-46 |
| MS.gene052519 | MS.gene34232 | 0.827893 | 1.22E-54 | -1.69E-46 |
| MS.gene052533 | MS.gene34232 | 0.805128 | 1.55E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene34232 | 0.805693 | 1.18E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene34232 | 0.829369 | 5.35E-55 | -1.69E-46 |
| MS.gene052773 | MS.gene34232 | 0.804949 | 1.69E-49 | -1.69E-46 |
| MS.gene052879 | MS.gene34232 | 0.807271 | 5.48E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene34232 | 0.871338 | 7.38E-67 | -1.69E-46 |
| MS.gene053122 | MS.gene34232 | 0.823422 | 1.40E-53 | -1.69E-46 |
| MS.gene053144 | MS.gene34232 | 0.811778 | 5.91E-51 | -1.69E-46 |
| MS.gene053195 | MS.gene34232 | 0.805542 | 1.27E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene34232 | 0.85501 | 8.40E-62 | -1.69E-46 |
| MS.gene053541 | MS.gene34232 | 0.84165 | 4.18E-58 | -1.69E-46 |
| MS.gene053542 | MS.gene34232 | 0.852747 | 3.77E-61 | -1.69E-46 |
| MS.gene053563 | MS.gene34232 | 0.805872 | 1.08E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene34232 | 0.812318 | 4.50E-51 | -1.69E-46 |
| MS.gene053581 | MS.gene34232 | 0.812183 | 4.82E-51 | -1.69E-46 |
| MS.gene053597 | MS.gene34232 | 0.823882 | 1.09E-53 | -1.69E-46 |
| MS.gene053599 | MS.gene34232 | 0.858888 | 6.04E-63 | -1.69E-46 |
| MS.gene05364 | MS.gene34232 | 0.887772 | 1.06E-72 | -1.69E-46 |
| MS.gene053678 | MS.gene34232 | 0.806542 | 7.82E-50 | -1.69E-46 |
| MS.gene053931 | MS.gene34232 | 0.857 | 2.20E-62 | -1.69E-46 |
| MS.gene053995 | MS.gene34232 | 0.805557 | 1.26E-49 | -1.69E-46 |
| MS.gene054142 | MS.gene34232 | 0.815187 | 1.05E-51 | -1.69E-46 |
| MS.gene054178 | MS.gene34232 | 0.810695 | 1.01E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene34232 | 0.806826 | 6.81E-50 | -1.69E-46 |
| MS.gene05458 | MS.gene34232 | 0.812734 | 3.65E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene34232 | 0.879949 | 8.20E-70 | -1.69E-46 |
| MS.gene054709 | MS.gene34232 | 0.81656 | 5.19E-52 | -1.69E-46 |
| MS.gene055083 | MS.gene34232 | 0.800065 | 1.72E-48 | -1.69E-46 |
| MS.gene055465 | MS.gene34232 | 0.822419 | 2.39E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene34232 | 0.813938 | 1.99E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene34232 | 0.803211 | 3.88E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene34232 | 0.854829 | 9.49E-62 | -1.69E-46 |
| MS.gene055513 | MS.gene34232 | 0.807961 | 3.91E-50 | -1.69E-46 |
| MS.gene055580 | MS.gene34232 | -0.818388 | 2.01E-52 | -1.69E-46 |
| MS.gene055694 | MS.gene34232 | 0.824413 | 8.18E-54 | -1.69E-46 |
| MS.gene055841 | MS.gene34232 | 0.833478 | 5.21E-56 | -1.69E-46 |
| MS.gene055890 | MS.gene34232 | 0.823205 | 1.57E-53 | -1.69E-46 |
| MS.gene055891 | MS.gene34232 | 0.839427 | 1.59E-57 | -1.69E-46 |
| MS.gene056005 | MS.gene34232 | 0.805131 | 1.55E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene34232 | 0.807857 | 4.12E-50 | -1.69E-46 |
| MS.gene056215 | MS.gene34232 | 0.813631 | 2.32E-51 | -1.69E-46 |
| MS.gene056254 | MS.gene34232 | 0.815711 | 8.04E-52 | -1.69E-46 |
| MS.gene056308 | MS.gene34232 | 0.823127 | 1.64E-53 | -1.69E-46 |
| MS.gene056366 | MS.gene34232 | 0.835562 | 1.56E-56 | -1.69E-46 |
| MS.gene056507 | MS.gene34232 | 0.813605 | 2.35E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene34232 | 0.868543 | 6.04E-66 | -1.69E-46 |
| MS.gene05690 | MS.gene34232 | 0.805606 | 1.23E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene34232 | 0.833742 | 4.48E-56 | -1.69E-46 |
| MS.gene057082 | MS.gene34232 | 0.802426 | 5.64E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene34232 | 0.829748 | 4.33E-55 | -1.69E-46 |
| MS.gene057208 | MS.gene34232 | 0.847854 | 8.88E-60 | -1.69E-46 |
| MS.gene057392 | MS.gene34232 | 0.825299 | 5.06E-54 | -1.69E-46 |
| MS.gene057444 | MS.gene34232 | 0.806711 | 7.20E-50 | -1.69E-46 |
| MS.gene057598 | MS.gene34232 | 0.807321 | 5.35E-50 | -1.69E-46 |
| MS.gene057693 | MS.gene34232 | 0.818173 | 2.25E-52 | -1.69E-46 |
| MS.gene057694 | MS.gene34232 | 0.823789 | 1.15E-53 | -1.69E-46 |
| MS.gene057705 | MS.gene34232 | 0.849284 | 3.57E-60 | -1.69E-46 |
| MS.gene057869 | MS.gene34232 | 0.818852 | 1.58E-52 | -1.69E-46 |
| MS.gene058008 | MS.gene34232 | 0.876271 | 1.59E-68 | -1.69E-46 |
| MS.gene058009 | MS.gene34232 | 0.878581 | 2.50E-69 | -1.69E-46 |
| MS.gene058010 | MS.gene34232 | 0.840358 | 9.12E-58 | -1.69E-46 |
| MS.gene058054 | MS.gene34232 | 0.808638 | 2.81E-50 | -1.69E-46 |
| MS.gene058055 | MS.gene34232 | 0.800117 | 1.68E-48 | -1.69E-46 |
| MS.gene058149 | MS.gene34232 | 0.82755 | 1.47E-54 | -1.69E-46 |
| MS.gene058292 | MS.gene34232 | 0.807429 | 5.08E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene34232 | 0.836717 | 7.94E-57 | -1.69E-46 |
| MS.gene058634 | MS.gene34232 | 0.818139 | 2.29E-52 | -1.69E-46 |
| MS.gene058781 | MS.gene34232 | 0.842885 | 1.97E-58 | -1.69E-46 |
| MS.gene058783 | MS.gene34232 | 0.842297 | 2.82E-58 | -1.69E-46 |
| MS.gene05894 | MS.gene34232 | 0.804615 | 1.98E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene34232 | 0.831454 | 1.65E-55 | -1.69E-46 |
| MS.gene059015 | MS.gene34232 | 0.811015 | 8.65E-51 | -1.69E-46 |
| MS.gene059146 | MS.gene34232 | 0.803809 | 2.92E-49 | -1.69E-46 |
| MS.gene059317 | MS.gene34232 | 0.803308 | 3.71E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene34232 | 0.811347 | 7.33E-51 | -1.69E-46 |
| MS.gene059778 | MS.gene34232 | 0.805358 | 1.39E-49 | -1.69E-46 |
| MS.gene05978 | MS.gene34232 | 0.876383 | 1.46E-68 | -1.69E-46 |
| MS.gene05985 | MS.gene34232 | -0.805167 | 1.52E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene34232 | 0.83501 | 2.15E-56 | -1.69E-46 |
| MS.gene060244 | MS.gene34232 | 0.817524 | 3.15E-52 | -1.69E-46 |
| MS.gene060365 | MS.gene34232 | 0.818308 | 2.10E-52 | -1.69E-46 |
| MS.gene060519 | MS.gene34232 | 0.808491 | 3.02E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene34232 | 0.875956 | 2.05E-68 | -1.69E-46 |
| MS.gene060933 | MS.gene34232 | 0.821713 | 3.49E-53 | -1.69E-46 |
| MS.gene060935 | MS.gene34232 | 0.863923 | 1.76E-64 | -1.69E-46 |
| MS.gene060937 | MS.gene34232 | 0.850693 | 1.44E-60 | -1.69E-46 |
| MS.gene061100 | MS.gene34232 | 0.820888 | 5.41E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34232.t1 | MTR_8g061280 | 97.529 | 526 | 13 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1044 |
| MS.gene34232.t1 | MTR_8g058790 | 97.529 | 526 | 13 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1044 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34232.t1 | AT3G15180 | 55.577 | 520 | 226 | 3 | 7 | 526 | 5 | 519 | 0.0 | 565 |
| MS.gene34232.t1 | AT3G15180 | 52.536 | 552 | 225 | 4 | 7 | 526 | 5 | 551 | 0.0 | 552 |
Find 100 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTGCTTTCATCAATAATT+AGG | 0.242205 | 8.4:-47584626 | MS.gene34232:intron |
| AGTTGTCTACCATGCCTTTC+TGG | 0.271925 | 8.4:+47567966 | None:intergenic |
| TTTGCAGGTCACTTCCCTTC+TGG | 0.285703 | 8.4:-47588600 | MS.gene34232:intron |
| CTTGAATCGTTGGGTCAAAT+AGG | 0.290113 | 8.4:-47582480 | MS.gene34232:CDS |
| TTAAATGTCTCACCGCTATA+CGG | 0.368585 | 8.4:+47562243 | None:intergenic |
| AGGTTATTCAAAACAAAATT+CGG | 0.377036 | 8.4:-47591009 | MS.gene34232:CDS |
| TTGCTTGATTGCCTTATCAA+TGG | 0.380041 | 8.4:-47588512 | MS.gene34232:CDS |
| TGGTGTCAGCTTTGAGCTCC+TGG | 0.386617 | 8.4:+47563260 | None:intergenic |
| GTATCACCTCCTTTGGTAGA+TGG | 0.389521 | 8.4:+47585943 | None:intergenic |
| GTCTCGACCGTGGTGCTTGA+TGG | 0.390375 | 8.4:-47561634 | MS.gene34232:CDS |
| TCGAGTTCGTGTATTGGCTT+TGG | 0.396063 | 8.4:-47585606 | MS.gene34232:CDS |
| ACCAGGGTAGTTGGCGAAAT+CGG | 0.401067 | 8.4:+47591440 | None:intergenic |
| TATCTACTTACCCATTGATA+AGG | 0.403257 | 8.4:+47588501 | None:intergenic |
| TTAGGGTCGAGTTCGTGTAT+TGG | 0.409795 | 8.4:-47585612 | MS.gene34232:intron |
| TGCTTGATTGCCTTATCAAT+GGG | 0.420789 | 8.4:-47588511 | MS.gene34232:intron |
| TAGCTGCTTGAAGGAGTTGT+TGG | 0.422593 | 8.4:+47591463 | None:intergenic |
| CTATCAGCCGTCATCACAAT+AGG | 0.428327 | 8.4:+47561136 | None:intergenic |
| TTCTCTCATTCCACAGTACA+TGG | 0.435662 | 8.4:-47590983 | MS.gene34232:intron |
| AAGGTCTGTATCACCTCCTT+TGG | 0.437675 | 8.4:+47585936 | None:intergenic |
| AGAAACGAAGAGGTGGCAGC+TGG | 0.443137 | 8.4:-47586144 | MS.gene34232:CDS |
| TATGACGTCATTCTCAGATC+TGG | 0.444701 | 8.4:+47563335 | None:intergenic |
| CGAAATCGGTAGCTGCTTGA+AGG | 0.448609 | 8.4:+47591454 | None:intergenic |
| AGCTGCTTGAAGGAGTTGTT+GGG | 0.449722 | 8.4:+47591464 | None:intergenic |
| TGAAACTGCACTTGAATCGT+TGG | 0.452928 | 8.4:-47582490 | MS.gene34232:CDS |
| TGAGGTTAGCGACGATTTCA+AGG | 0.456722 | 8.4:-47584522 | MS.gene34232:intron |
| CGAAAACACTTAAAGTTACA+AGG | 0.462832 | 8.4:+47585483 | None:intergenic |
| TGAGGGTAGACTTCAGTCCT+TGG | 0.465415 | 8.4:-47582535 | MS.gene34232:CDS |
| AATTGTTATTTCATCCATTG+AGG | 0.467650 | 8.4:-47582553 | MS.gene34232:CDS |
| GTTCAGCAATTTGTTCAAGT+TGG | 0.473635 | 8.4:-47590832 | MS.gene34232:intron |
| TTTCATAAAGTAAGCGAAGC+AGG | 0.475520 | 8.4:+47563289 | None:intergenic |
| CTGCTTCCAACAGTGTAAGT+AGG | 0.479841 | 8.4:+47585528 | None:intergenic |
| TCAAATTCATCTTTATTTGA+AGG | 0.481539 | 8.4:+47582510 | None:intergenic |
| GCAGCTGTTCCTGCAAAAGC+AGG | 0.484395 | 8.4:+47561346 | None:intergenic |
| CTTACATGGTTCATCTATGA+AGG | 0.486485 | 8.4:+47584433 | None:intergenic |
| CAGACTCAATTTGATGTACC+TGG | 0.486714 | 8.4:-47591063 | MS.gene34232:CDS |
| GGACTGAAGTCTACCCTCAA+TGG | 0.487252 | 8.4:+47582539 | None:intergenic |
| AAGTAGGTTTAAACTGCATA+TGG | 0.488548 | 8.4:+47585544 | None:intergenic |
| ATTTGTTCAAGTTGGTCTGC+AGG | 0.489346 | 8.4:-47590824 | MS.gene34232:CDS |
| CAGGGTTATAGAATGATAAG+TGG | 0.493664 | 8.4:-47561663 | MS.gene34232:CDS |
| CAAATTCATCTTTATTTGAA+GGG | 0.498349 | 8.4:+47582511 | None:intergenic |
| TCAAGAGCAATGATGATAAG+TGG | 0.498760 | 8.4:-47584485 | MS.gene34232:CDS |
| AGAAAGGCATGGTAGACAAC+TGG | 0.499718 | 8.4:-47567964 | MS.gene34232:intron |
| ATCTTTATTTGAAGGGTCCA+AGG | 0.502106 | 8.4:+47582518 | None:intergenic |
| AACTTGATAATGAGTGGAAG+AGG | 0.503962 | 8.4:+47591264 | None:intergenic |
| TTGATGAAAGCAGTTGAAAG+AGG | 0.509011 | 8.4:+47584634 | None:intergenic |
| ATAAGGCAATCAAGCAAAAG+TGG | 0.509511 | 8.4:+47588518 | None:intergenic |
| AGTTCGTGTATTGGCTTTGG+TGG | 0.509973 | 8.4:-47585603 | MS.gene34232:CDS |
| CTGCAAGAAGCCGTAGGAAT+GGG | 0.511865 | 8.4:-47561196 | MS.gene34232:CDS |
| ACGGAACTAGTGTAGTTTGT+AGG | 0.515735 | 8.4:+47591040 | None:intergenic |
| CAGGCTGCACTGCATGCTCT+AGG | 0.517824 | 8.4:-47563375 | MS.gene34232:CDS |
| GAAACTGCACTTGAATCGTT+GGG | 0.520239 | 8.4:-47582489 | MS.gene34232:CDS |
| ATTGTTATTTCATCCATTGA+GGG | 0.524808 | 8.4:-47582552 | MS.gene34232:CDS |
| CGCTTTCGATGATGAAGATA+CGG | 0.525676 | 8.4:+47561172 | None:intergenic |
| TTTAAACCTACTTACACTGT+TGG | 0.530327 | 8.4:-47585534 | MS.gene34232:CDS |
| CACTAGTTCCGTGCCTTGAA+AGG | 0.532106 | 8.4:-47591029 | MS.gene34232:CDS |
| GGAGCTAAATTACTACTCTC+AGG | 0.536878 | 8.4:-47568041 | MS.gene34232:CDS |
| GCTGCAAGAAGCCGTAGGAA+TGG | 0.539955 | 8.4:-47561197 | MS.gene34232:CDS |
| AAACCACTAACCAGGGTAGT+TGG | 0.540219 | 8.4:+47591431 | None:intergenic |
| AAACGAAGAGGTGGCAGCTG+GGG | 0.541524 | 8.4:-47586142 | MS.gene34232:CDS |
| GAAACGAAGAGGTGGCAGCT+GGG | 0.546177 | 8.4:-47586143 | MS.gene34232:CDS |
| TCAATAGCATGTCTAGCAGC+AGG | 0.549937 | 8.4:+47568011 | None:intergenic |
| GCATGCTCTAGGAAACATCT+CGG | 0.550660 | 8.4:-47563364 | MS.gene34232:CDS |
| ACTAGTGTAGTTTGTAGGCC+AGG | 0.550873 | 8.4:+47591045 | None:intergenic |
| TGTAGTTTCAGTACTTGGGT+CGG | 0.550899 | 8.4:+47561575 | None:intergenic |
| AGCATCACAATGTTCATCAC+TGG | 0.550928 | 8.4:-47585905 | MS.gene34232:intron |
| ACTTGATAATGAGTGGAAGA+GGG | 0.552430 | 8.4:+47591265 | None:intergenic |
| AAGTGGAAGGCTACTATCCA+AGG | 0.552961 | 8.4:-47584468 | MS.gene34232:CDS |
| TACTTTATGAAACAGCATCC+AGG | 0.554953 | 8.4:-47563278 | MS.gene34232:CDS |
| TGAAGTAACTTGATAATGAG+TGG | 0.556956 | 8.4:+47591258 | None:intergenic |
| TTATAGAATGATAAGTGGAT+TGG | 0.557998 | 8.4:-47561658 | MS.gene34232:CDS |
| AATTGTCAAGATTCTCCAGA+AGG | 0.559293 | 8.4:+47588585 | None:intergenic |
| ACCGATTTCGCCAACTACCC+TGG | 0.569158 | 8.4:-47591441 | MS.gene34232:intron |
| AAAGGAGGTGATACAGACCT+TGG | 0.570033 | 8.4:-47585934 | MS.gene34232:CDS |
| TTGAATAACCTTTCAAGGCA+CGG | 0.574650 | 8.4:+47591021 | None:intergenic |
| AAGGAGGTGATACAGACCTT+GGG | 0.578352 | 8.4:-47585933 | MS.gene34232:CDS |
| ATCTTTCCATCTACCAAAGG+AGG | 0.591623 | 8.4:-47585949 | MS.gene34232:CDS |
| TGCTTGAAGGAGTTGTTGGG+AGG | 0.602619 | 8.4:+47591467 | None:intergenic |
| AGCTCAACCTATTGTGATGA+CGG | 0.603732 | 8.4:-47561143 | MS.gene34232:CDS |
| TTGATCGACGAGGACCAGAA+AGG | 0.603860 | 8.4:-47567980 | MS.gene34232:CDS |
| GAGCAATGATGATAAGTGGA+AGG | 0.604853 | 8.4:-47584481 | MS.gene34232:CDS |
| CATGCTCTAGGAAACATCTC+GGG | 0.609327 | 8.4:-47563363 | MS.gene34232:CDS |
| TTTGTGATCATAGCTATCAG+AGG | 0.612390 | 8.4:-47568062 | MS.gene34232:intron |
| ATTGTCAAGATTCTCCAGAA+GGG | 0.612890 | 8.4:+47588586 | None:intergenic |
| GAGCTCAAAGCTGACACCAT+CGG | 0.619703 | 8.4:-47563256 | MS.gene34232:intron |
| ATAATCTTTCCATCTACCAA+AGG | 0.634831 | 8.4:-47585952 | MS.gene34232:CDS |
| AAGATACGGACCCATTCCTA+CGG | 0.635459 | 8.4:+47561186 | None:intergenic |
| CAGCTAGCAGAGGTTGAGCA+TGG | 0.636743 | 8.4:-47584681 | MS.gene34232:CDS |
| CTAGATATAACTGCTGCATG+CGG | 0.647515 | 8.4:-47561411 | MS.gene34232:CDS |
| GAAATGGATGCAGCTAGCAG+AGG | 0.649349 | 8.4:-47584691 | MS.gene34232:intron |
| CGACGAGGACCAGAAAGGCA+TGG | 0.652455 | 8.4:-47567975 | MS.gene34232:CDS |
| TCACATATGCAGAAACGAAG+AGG | 0.661078 | 8.4:-47586154 | MS.gene34232:intron |
| ATTGTGATGCTATAATCCCA+AGG | 0.661427 | 8.4:+47585917 | None:intergenic |
| GTGCAGCTGCAAGAAGCCGT+AGG | 0.664105 | 8.4:-47561202 | MS.gene34232:intron |
| GAAAACACTTAAAGTTACAA+GGG | 0.679076 | 8.4:+47585484 | None:intergenic |
| CATATGCAGAAACGAAGAGG+TGG | 0.680999 | 8.4:-47586151 | MS.gene34232:intron |
| GCGATTGAGAAAATCTGTAG+CGG | 0.683960 | 8.4:+47591290 | None:intergenic |
| AGATTCAGAAATCCGTATAG+CGG | 0.690364 | 8.4:-47562255 | MS.gene34232:intron |
| TGATGACAAACCATGTACTG+TGG | 0.692128 | 8.4:+47590973 | None:intergenic |
| CATATCTCCATCAAGCACCA+CGG | 0.693939 | 8.4:+47561627 | None:intergenic |
| GTGGATTGGTGTCTCGACCG+TGG | 0.710959 | 8.4:-47561644 | MS.gene34232:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 47561129 | 47591502 | 47561129 | ID=MS.gene34232 |
| chr8.4 | mRNA | 47561129 | 47591502 | 47561129 | ID=MS.gene34232.t1;Parent=MS.gene34232 |
| chr8.4 | exon | 47591442 | 47591502 | 47591442 | ID=MS.gene34232.t1.exon1;Parent=MS.gene34232.t1 |
| chr8.4 | CDS | 47591442 | 47591502 | 47591442 | ID=cds.MS.gene34232.t1;Parent=MS.gene34232.t1 |
| chr8.4 | exon | 47591267 | 47591330 | 47591267 | ID=MS.gene34232.t1.exon2;Parent=MS.gene34232.t1 |
| chr8.4 | CDS | 47591267 | 47591330 | 47591267 | ID=cds.MS.gene34232.t1;Parent=MS.gene34232.t1 |
| chr8.4 | exon | 47590984 | 47591092 | 47590984 | ID=MS.gene34232.t1.exon3;Parent=MS.gene34232.t1 |
| chr8.4 | CDS | 47590984 | 47591092 | 47590984 | ID=cds.MS.gene34232.t1;Parent=MS.gene34232.t1 |
| chr8.4 | exon | 47590786 | 47590848 | 47590786 | ID=MS.gene34232.t1.exon4;Parent=MS.gene34232.t1 |
| chr8.4 | CDS | 47590786 | 47590848 | 47590786 | ID=cds.MS.gene34232.t1;Parent=MS.gene34232.t1 |
| chr8.4 | exon | 47588512 | 47588615 | 47588512 | ID=MS.gene34232.t1.exon5;Parent=MS.gene34232.t1 |
| chr8.4 | CDS | 47588512 | 47588615 | 47588512 | ID=cds.MS.gene34232.t1;Parent=MS.gene34232.t1 |
| chr8.4 | exon | 47586098 | 47586164 | 47586098 | ID=MS.gene34232.t1.exon6;Parent=MS.gene34232.t1 |
| chr8.4 | CDS | 47586098 | 47586164 | 47586098 | ID=cds.MS.gene34232.t1;Parent=MS.gene34232.t1 |
| chr8.4 | exon | 47585906 | 47585977 | 47585906 | ID=MS.gene34232.t1.exon7;Parent=MS.gene34232.t1 |
| chr8.4 | CDS | 47585906 | 47585977 | 47585906 | ID=cds.MS.gene34232.t1;Parent=MS.gene34232.t1 |
| chr8.4 | exon | 47585469 | 47585630 | 47585469 | ID=MS.gene34232.t1.exon8;Parent=MS.gene34232.t1 |
| chr8.4 | CDS | 47585469 | 47585630 | 47585469 | ID=cds.MS.gene34232.t1;Parent=MS.gene34232.t1 |
| chr8.4 | exon | 47584627 | 47584700 | 47584627 | ID=MS.gene34232.t1.exon9;Parent=MS.gene34232.t1 |
| chr8.4 | CDS | 47584627 | 47584700 | 47584627 | ID=cds.MS.gene34232.t1;Parent=MS.gene34232.t1 |
| chr8.4 | exon | 47584438 | 47584535 | 47584438 | ID=MS.gene34232.t1.exon10;Parent=MS.gene34232.t1 |
| chr8.4 | CDS | 47584438 | 47584535 | 47584438 | ID=cds.MS.gene34232.t1;Parent=MS.gene34232.t1 |
| chr8.4 | exon | 47582475 | 47582582 | 47582475 | ID=MS.gene34232.t1.exon11;Parent=MS.gene34232.t1 |
| chr8.4 | CDS | 47582475 | 47582582 | 47582475 | ID=cds.MS.gene34232.t1;Parent=MS.gene34232.t1 |
| chr8.4 | exon | 47567965 | 47568071 | 47567965 | ID=MS.gene34232.t1.exon12;Parent=MS.gene34232.t1 |
| chr8.4 | CDS | 47567965 | 47568071 | 47567965 | ID=cds.MS.gene34232.t1;Parent=MS.gene34232.t1 |
| chr8.4 | exon | 47563257 | 47563394 | 47563257 | ID=MS.gene34232.t1.exon13;Parent=MS.gene34232.t1 |
| chr8.4 | CDS | 47563257 | 47563394 | 47563257 | ID=cds.MS.gene34232.t1;Parent=MS.gene34232.t1 |
| chr8.4 | exon | 47562256 | 47562303 | 47562256 | ID=MS.gene34232.t1.exon14;Parent=MS.gene34232.t1 |
| chr8.4 | CDS | 47562256 | 47562303 | 47562256 | ID=cds.MS.gene34232.t1;Parent=MS.gene34232.t1 |
| chr8.4 | exon | 47561568 | 47561682 | 47561568 | ID=MS.gene34232.t1.exon15;Parent=MS.gene34232.t1 |
| chr8.4 | CDS | 47561568 | 47561682 | 47561568 | ID=cds.MS.gene34232.t1;Parent=MS.gene34232.t1 |
| chr8.4 | exon | 47561342 | 47561442 | 47561342 | ID=MS.gene34232.t1.exon16;Parent=MS.gene34232.t1 |
| chr8.4 | CDS | 47561342 | 47561442 | 47561342 | ID=cds.MS.gene34232.t1;Parent=MS.gene34232.t1 |
| chr8.4 | exon | 47561129 | 47561218 | 47561129 | ID=MS.gene34232.t1.exon17;Parent=MS.gene34232.t1 |
| chr8.4 | CDS | 47561129 | 47561218 | 47561129 | ID=cds.MS.gene34232.t1;Parent=MS.gene34232.t1 |
| Gene Sequence |
| Protein sequence |
