Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056309.t1 | XP_003621540.1 | 98.9 | 182 | 2 | 0 | 1 | 182 | 1 | 182 | 1.90E-95 | 358.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056309.t1 | Q8LE94 | 53.2 | 190 | 77 | 4 | 1 | 182 | 1 | 186 | 8.9e-46 | 184.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056309.t1 | B7FJQ8 | 98.9 | 182 | 2 | 0 | 1 | 182 | 1 | 182 | 1.3e-95 | 358.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050380 | MS.gene056309 | 0.800625 | 1.32E-48 | -1.69E-46 |
| MS.gene056309 | MS.gene058171 | 0.80371 | 3.06E-49 | -1.69E-46 |
| MS.gene056309 | MS.gene058173 | 0.805829 | 1.11E-49 | -1.69E-46 |
| MS.gene056309 | MS.gene058175 | 0.805052 | 1.61E-49 | -1.69E-46 |
| MS.gene056309 | MS.gene065540 | -0.801089 | 1.06E-48 | -1.69E-46 |
| MS.gene056309 | MS.gene071843 | 0.804049 | 2.60E-49 | -1.69E-46 |
| MS.gene056309 | MS.gene27645 | 0.818299 | 2.11E-52 | -1.69E-46 |
| MS.gene056309 | MS.gene38155 | 0.803571 | 3.27E-49 | -1.69E-46 |
| MS.gene056309 | MS.gene42233 | 0.806604 | 7.59E-50 | -1.69E-46 |
| MS.gene056309 | MS.gene49884 | 0.880742 | 4.27E-70 | -1.69E-46 |
| MS.gene056309 | MS.gene68457 | -0.800651 | 1.30E-48 | -1.69E-46 |
| MS.gene056309 | MS.gene68458 | -0.80376 | 2.99E-49 | -1.69E-46 |
| MS.gene056309 | MS.gene73493 | -0.800123 | 1.67E-48 | -1.69E-46 |
| MS.gene056309 | MS.gene92777 | 0.840127 | 1.05E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056309.t1 | MTR_7g016840 | 98.901 | 182 | 2 | 0 | 1 | 182 | 1 | 182 | 2.20e-131 | 368 |
| MS.gene056309.t1 | MTR_6g015980 | 68.852 | 183 | 57 | 0 | 1 | 183 | 1 | 183 | 3.83e-91 | 265 |
| MS.gene056309.t1 | MTR_6g015980 | 69.231 | 182 | 56 | 0 | 1 | 182 | 1 | 182 | 2.12e-90 | 265 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056309.t1 | AT5G15790 | 48.980 | 196 | 95 | 3 | 1 | 191 | 1 | 196 | 4.69e-58 | 182 |
| MS.gene056309.t1 | AT5G15790 | 48.980 | 196 | 95 | 3 | 1 | 191 | 1 | 196 | 4.69e-58 | 182 |
| MS.gene056309.t1 | AT5G15790 | 48.980 | 196 | 95 | 3 | 1 | 191 | 1 | 196 | 4.69e-58 | 182 |
| MS.gene056309.t1 | AT5G15790 | 48.980 | 196 | 95 | 3 | 1 | 191 | 1 | 196 | 4.69e-58 | 182 |
| MS.gene056309.t1 | AT5G15790 | 50.262 | 191 | 90 | 3 | 1 | 186 | 1 | 191 | 6.14e-58 | 183 |
| MS.gene056309.t1 | AT5G38895 | 47.541 | 183 | 86 | 2 | 1 | 182 | 1 | 174 | 1.60e-56 | 178 |
| MS.gene056309.t1 | AT5G38895 | 47.541 | 183 | 86 | 2 | 1 | 182 | 76 | 249 | 1.64e-55 | 178 |
| MS.gene056309.t1 | AT5G38895 | 47.541 | 183 | 86 | 2 | 1 | 182 | 115 | 288 | 4.08e-55 | 178 |
| MS.gene056309.t1 | AT3G02290 | 51.256 | 199 | 85 | 4 | 1 | 191 | 1 | 195 | 1.74e-51 | 166 |
| MS.gene056309.t1 | AT3G02290 | 51.256 | 199 | 85 | 4 | 1 | 191 | 1 | 195 | 1.74e-51 | 166 |
| MS.gene056309.t1 | AT3G02290 | 51.256 | 199 | 85 | 4 | 1 | 191 | 1 | 195 | 1.74e-51 | 166 |
| MS.gene056309.t1 | AT3G02290 | 51.256 | 199 | 85 | 4 | 1 | 191 | 1 | 195 | 1.74e-51 | 166 |
| MS.gene056309.t1 | AT3G02290 | 51.256 | 199 | 85 | 4 | 1 | 191 | 1 | 195 | 1.74e-51 | 166 |
| MS.gene056309.t1 | AT3G02290 | 52.577 | 194 | 80 | 4 | 1 | 186 | 1 | 190 | 3.07e-51 | 165 |
Find 54 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAGAACCTATGCAGTGTT+TGG | 0.318202 | 7.3:+81776330 | None:intergenic |
| CCACTCGAACTCAAAGATTC+TGG | 0.334628 | 7.3:+81776714 | None:intergenic |
| ATTCATCAATATTCCGTAGA+AGG | 0.334711 | 7.3:-81776968 | MS.gene056309:CDS |
| ATGAAGAGTCAGAACCTCTA+AGG | 0.349845 | 7.3:-81776755 | MS.gene056309:CDS |
| TGAGAACCTATGCAGTGTTT+GGG | 0.366647 | 7.3:+81776331 | None:intergenic |
| TTGCTTCCTACAAAACATTT+CGG | 0.374780 | 7.3:-81777966 | MS.gene056309:CDS |
| GTGACCACCGACCGCAATAC+TGG | 0.397958 | 7.3:+81776356 | None:intergenic |
| GGCGCTTCCTTCATCTGTAC+AGG | 0.397993 | 7.3:-81776937 | MS.gene056309:CDS |
| ACATCCACATCAACCCTTAG+AGG | 0.398565 | 7.3:+81776741 | None:intergenic |
| GCATCATAAGGTAACGGCCT+TGG | 0.417133 | 7.3:+81776849 | None:intergenic |
| TCGTCAGCAAAACTTACAAC+TGG | 0.421306 | 7.3:-81776624 | MS.gene056309:CDS |
| TGACTCTTCATTCAAATGAC+TGG | 0.466664 | 7.3:+81776767 | None:intergenic |
| CTTTGAGTTCGAGTGGTAAG+TGG | 0.471217 | 7.3:-81776707 | MS.gene056309:CDS |
| AAAGAATCCACCGGAAAAGA+TGG | 0.473727 | 7.3:-81776684 | MS.gene056309:CDS |
| CGAAAGTCTTACTGAGGACT+TGG | 0.474607 | 7.3:+81776644 | None:intergenic |
| TGCTGTGAGCGGAAATGCCT+AGG | 0.475931 | 7.3:+81776822 | None:intergenic |
| GCGCCTGCATTTCCCTTCTA+CGG | 0.477472 | 7.3:+81776955 | None:intergenic |
| TGCCTAGGGTCTGCATCATA+AGG | 0.490563 | 7.3:+81776837 | None:intergenic |
| TGTTGTCCAACATGTCTTGA+AGG | 0.500625 | 7.3:-81776564 | MS.gene056309:intron |
| ACTTGTTTCAAGACGTGAGA+AGG | 0.512160 | 7.3:-81776793 | MS.gene056309:CDS |
| GCGCTTCCTTCATCTGTACA+GGG | 0.517323 | 7.3:-81776936 | MS.gene056309:CDS |
| ATCCACATAGTCATGTGTAT+AGG | 0.525675 | 7.3:-81778006 | MS.gene056309:CDS |
| TCATAAGGTAACGGCCTTGG+AGG | 0.533910 | 7.3:+81776852 | None:intergenic |
| TTCATCAATATTCCGTAGAA+GGG | 0.549107 | 7.3:-81776967 | MS.gene056309:CDS |
| CTTGTTTCAAGACGTGAGAA+GGG | 0.550647 | 7.3:-81776792 | MS.gene056309:CDS |
| AACAATTAGTGCCAGTATTG+CGG | 0.552229 | 7.3:-81776367 | MS.gene056309:CDS |
| ATTCCGTAGAAGGGAAATGC+AGG | 0.562146 | 7.3:-81776958 | MS.gene056309:CDS |
| GAGAACCTATGCAGTGTTTG+GGG | 0.567287 | 7.3:+81776332 | None:intergenic |
| AAGTTACCTTCAAGACATGT+TGG | 0.571053 | 7.3:+81776558 | None:intergenic |
| AAGAATCCACCGGAAAAGAT+GGG | 0.575796 | 7.3:-81776683 | MS.gene056309:CDS |
| AGATATACCGTTCTCCTCCA+AGG | 0.579863 | 7.3:-81776866 | MS.gene056309:CDS |
| TGAAGAGTCAGAACCTCTAA+GGG | 0.583867 | 7.3:-81776754 | MS.gene056309:CDS |
| TTCCTATACACATGACTATG+TGG | 0.586658 | 7.3:+81778004 | None:intergenic |
| GCTGTGAGCGGAAATGCCTA+GGG | 0.588359 | 7.3:+81776823 | None:intergenic |
| AGAACCTCTAAGGGTTGATG+TGG | 0.590546 | 7.3:-81776745 | MS.gene056309:CDS |
| CCAGAATCTTTGAGTTCGAG+TGG | 0.597311 | 7.3:-81776714 | MS.gene056309:CDS |
| GGGTCTGCATCATAAGGTAA+CGG | 0.597642 | 7.3:+81776843 | None:intergenic |
| CACCGGAAAAGATGGGTCAA+AGG | 0.597790 | 7.3:-81776676 | MS.gene056309:CDS |
| TACCTTATGATGCAGACCCT+AGG | 0.614377 | 7.3:-81776839 | MS.gene056309:CDS |
| CGCTTCCTTCATCTGTACAG+GGG | 0.615527 | 7.3:-81776935 | MS.gene056309:CDS |
| TATAGGAACTGCGTTTGTGT+CGG | 0.618127 | 7.3:-81777989 | MS.gene056309:CDS |
| TGTGTATGCATCATCAGAAG+AGG | 0.628234 | 7.3:-81776592 | MS.gene056309:CDS |
| CAAGTCCGTCATGCTGTGAG+CGG | 0.633869 | 7.3:+81776811 | None:intergenic |
| GTAACGGCCTTGGAGGAGAA+CGG | 0.636124 | 7.3:+81776859 | None:intergenic |
| GTATGCATCATCAGAAGAGG+AGG | 0.639945 | 7.3:-81776589 | MS.gene056309:CDS |
| TGCTGACGAAAGTCTTACTG+AGG | 0.641679 | 7.3:+81776638 | None:intergenic |
| AGTGCCAGTATTGCGGTCGG+TGG | 0.644712 | 7.3:-81776360 | MS.gene056309:CDS |
| GGTAAGTGGAAAGAATCCAC+CGG | 0.653432 | 7.3:-81776693 | MS.gene056309:CDS |
| GCTTCCTTCATCTGTACAGG+GGG | 0.654449 | 7.3:-81776934 | MS.gene056309:CDS |
| GTCTTACTGAGGACTTGGAA+CGG | 0.666475 | 7.3:+81776649 | None:intergenic |
| CATTTCCGCTCACAGCATGA+CGG | 0.669127 | 7.3:-81776816 | MS.gene056309:CDS |
| ATTAGTGCCAGTATTGCGGT+CGG | 0.674400 | 7.3:-81776363 | MS.gene056309:CDS |
| AGAACCTATGCAGTGTTTGG+GGG | 0.678900 | 7.3:+81776333 | None:intergenic |
| GAACCTATGCAGTGTTTGGG+GGG | 0.707891 | 7.3:+81776334 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTATATTATATTATATT+AGG | - | chr7.3:81776884-81776903 | MS.gene056309:CDS | 0.0% |
| !! | TATTATATTATATTAGGATT+AGG | - | chr7.3:81776895-81776914 | MS.gene056309:CDS | 10.0% |
| !! | TATTGTATTATATTAGAATT+AGG | - | chr7.3:81777040-81777059 | MS.gene056309:intron | 10.0% |
| !! | AAAAAATTTGCATTGAAATT+TGG | + | chr7.3:81776720-81776739 | None:intergenic | 15.0% |
| !! | AATTTACAATAAGATACTTA+AGG | + | chr7.3:81777249-81777268 | None:intergenic | 15.0% |
| !!! | TTGACTTAATTTGTTTAATT+CGG | - | chr7.3:81777960-81777979 | MS.gene056309:intron | 15.0% |
| !! | ATTGGAAAAAAGTTATATGA+TGG | + | chr7.3:81777391-81777410 | None:intergenic | 20.0% |
| !! | ATTTCATACTGTTTAATACT+AGG | - | chr7.3:81777866-81777885 | MS.gene056309:intron | 20.0% |
| !!! | TGACTTAATTTGTTTAATTC+GGG | - | chr7.3:81777961-81777980 | MS.gene056309:CDS | 20.0% |
| !!! | TTTTATATCTAAAATCCTTC+TGG | - | chr7.3:81776749-81776768 | MS.gene056309:CDS | 20.0% |
| !!! | TTTTTATGTTCCATAATCTA+AGG | - | chr7.3:81776524-81776543 | MS.gene056309:intron | 20.0% |
| ! | AAGACATTATCCTTTATACT+CGG | + | chr7.3:81777095-81777114 | None:intergenic | 25.0% |
| ! | ACAACTCAAATGAAATAATG+TGG | + | chr7.3:81776978-81776997 | None:intergenic | 25.0% |
| ! | ACTACATTATCCTTTATACT+CGG | + | chr7.3:81776950-81776969 | None:intergenic | 25.0% |
| ! | GTAGAAAATATAAACACACT+TGG | + | chr7.3:81777287-81777306 | None:intergenic | 25.0% |
| ! | TCAAACAAATCCTTAGATTA+TGG | + | chr7.3:81776537-81776556 | None:intergenic | 25.0% |
| ! | TTGATGAATACTGAAATTCA+AGG | + | chr7.3:81777417-81777436 | None:intergenic | 25.0% |
| !! | ATAATTTTGTGGTATACTTG+TGG | - | chr7.3:81777988-81778007 | MS.gene056309:CDS | 25.0% |
| !! | ATTCGGGTATTATAATTTTG+TGG | - | chr7.3:81777977-81777996 | MS.gene056309:CDS | 25.0% |
| !! | CAAAACAAAGAATAGTCTTA+CGG | - | chr7.3:81777165-81777184 | MS.gene056309:intron | 25.0% |
| AATTGAGTTCAAACATCAAG+TGG | + | chr7.3:81777907-81777926 | None:intergenic | 30.0% | |
| AGACATTATCCTTTATACTC+GGG | + | chr7.3:81777094-81777113 | None:intergenic | 30.0% | |
| ATGAATACTGAAATTCAAGG+TGG | + | chr7.3:81777414-81777433 | None:intergenic | 30.0% | |
| ATTCATCAATATTCCGTAGA+AGG | - | chr7.3:81777428-81777447 | MS.gene056309:intron | 30.0% | |
| CTACATTATCCTTTATACTC+GGG | + | chr7.3:81776949-81776968 | None:intergenic | 30.0% | |
| TTCATCAATATTCCGTAGAA+GGG | - | chr7.3:81777429-81777448 | MS.gene056309:intron | 30.0% | |
| TTGCTTCCTACAAAACATTT+CGG | - | chr7.3:81776430-81776449 | MS.gene056309:intron | 30.0% | |
| ! | CTCAATTTTGTACGAAATGT+AGG | - | chr7.3:81777920-81777939 | MS.gene056309:intron | 30.0% |
| AACAATTAGTGCCAGTATTG+CGG | - | chr7.3:81778029-81778048 | MS.gene056309:CDS | 35.0% | |
| AAGTTACCTTCAAGACATGT+TGG | + | chr7.3:81777841-81777860 | None:intergenic | 35.0% | |
| ATCCACATAGTCATGTGTAT+AGG | - | chr7.3:81776390-81776409 | MS.gene056309:intron | 35.0% | |
| CAATCAATAACTTCGGTTGA+CGG | - | chr7.3:81776693-81776712 | MS.gene056309:CDS | 35.0% | |
| GGTCAACCAATCAATAACTT+CGG | - | chr7.3:81776686-81776705 | MS.gene056309:CDS | 35.0% | |
| TACTGAAATTCAAGGTGGAT+TGG | + | chr7.3:81777409-81777428 | None:intergenic | 35.0% | |
| TGACTCTTCATTCAAATGAC+TGG | + | chr7.3:81777632-81777651 | None:intergenic | 35.0% | |
| TTCCTATACACATGACTATG+TGG | + | chr7.3:81776395-81776414 | None:intergenic | 35.0% | |
| AAAGAATCCACCGGAAAAGA+TGG | - | chr7.3:81777712-81777731 | MS.gene056309:intron | 40.0% | |
| AAGAATCCACCGGAAAAGAT+GGG | - | chr7.3:81777713-81777732 | MS.gene056309:intron | 40.0% | |
| ACATAGATGAGAGAGAACGA+AGG | + | chr7.3:81776841-81776860 | None:intergenic | 40.0% | |
| ACTTGTTTCAAGACGTGAGA+AGG | - | chr7.3:81777603-81777622 | MS.gene056309:intron | 40.0% | |
| ATGAAGAGTCAGAACCTCTA+AGG | - | chr7.3:81777641-81777660 | MS.gene056309:intron | 40.0% | |
| CATAGATGAGAGAGAACGAA+GGG | + | chr7.3:81776840-81776859 | None:intergenic | 40.0% | |
| CGTCAACCGAAGTTATTGAT+TGG | + | chr7.3:81776695-81776714 | None:intergenic | 40.0% | |
| CTTGTTTCAAGACGTGAGAA+GGG | - | chr7.3:81777604-81777623 | MS.gene056309:intron | 40.0% | |
| TATAGGAACTGCGTTTGTGT+CGG | - | chr7.3:81776407-81776426 | MS.gene056309:intron | 40.0% | |
| TCGTCAGCAAAACTTACAAC+TGG | - | chr7.3:81777772-81777791 | MS.gene056309:intron | 40.0% | |
| TGAAGAGTCAGAACCTCTAA+GGG | - | chr7.3:81777642-81777661 | MS.gene056309:intron | 40.0% | |
| TGTGTATGCATCATCAGAAG+AGG | - | chr7.3:81777804-81777823 | MS.gene056309:intron | 40.0% | |
| TGTTGTCCAACATGTCTTGA+AGG | - | chr7.3:81777832-81777851 | MS.gene056309:intron | 40.0% | |
| TTGAACACTCCCGAGTATAA+AGG | - | chr7.3:81776937-81776956 | MS.gene056309:CDS | 40.0% | |
| ! | CAACAGCCGAAATGTTTTGT+AGG | + | chr7.3:81776439-81776458 | None:intergenic | 40.0% |
| ! | GCTAATCTAGAACTTTGCTG+AGG | - | chr7.3:81776495-81776514 | MS.gene056309:intron | 40.0% |
| ! | TTCCTTTGACCCATCTTTTC+CGG | + | chr7.3:81777725-81777744 | None:intergenic | 40.0% |
| ACATCCACATCAACCCTTAG+AGG | + | chr7.3:81777658-81777677 | None:intergenic | 45.0% | |
| AGATATACCGTTCTCCTCCA+AGG | - | chr7.3:81777530-81777549 | MS.gene056309:intron | 45.0% | |
| ATGAGAGAGAACGAAGGGTA+GGG | + | chr7.3:81776835-81776854 | None:intergenic | 45.0% | |
| ATTAGTGCCAGTATTGCGGT+CGG | - | chr7.3:81778033-81778052 | MS.gene056309:CDS | 45.0% | |
| ATTCCGTAGAAGGGAAATGC+AGG | - | chr7.3:81777438-81777457 | MS.gene056309:intron | 45.0% | |
| CAAACCCGTTGCATTGCATT+GGG | + | chr7.3:81776632-81776651 | None:intergenic | 45.0% | |
| CCACTCGAACTCAAAGATTC+TGG | + | chr7.3:81777685-81777704 | None:intergenic | 45.0% | |
| CGAAAGTCTTACTGAGGACT+TGG | + | chr7.3:81777755-81777774 | None:intergenic | 45.0% | |
| CTTGACCCAATGCAATGCAA+CGG | - | chr7.3:81776624-81776643 | MS.gene056309:CDS | 45.0% | |
| GGGTCTGCATCATAAGGTAA+CGG | + | chr7.3:81777556-81777575 | None:intergenic | 45.0% | |
| GGTAAGTGGAAAGAATCCAC+CGG | - | chr7.3:81777703-81777722 | MS.gene056309:intron | 45.0% | |
| GTATGCATCATCAGAAGAGG+AGG | - | chr7.3:81777807-81777826 | MS.gene056309:intron | 45.0% | |
| GTCTTACTGAGGACTTGGAA+CGG | + | chr7.3:81777750-81777769 | None:intergenic | 45.0% | |
| TACCTTATGATGCAGACCCT+AGG | - | chr7.3:81777557-81777576 | MS.gene056309:intron | 45.0% | |
| TGCTGACGAAAGTCTTACTG+AGG | + | chr7.3:81777761-81777780 | None:intergenic | 45.0% | |
| TTGACCCAATGCAATGCAAC+GGG | - | chr7.3:81776625-81776644 | MS.gene056309:CDS | 45.0% | |
| ! | CCAGAATCTTTGAGTTCGAG+TGG | - | chr7.3:81777682-81777701 | MS.gene056309:intron | 45.0% |
| ! | CTTTGAGTTCGAGTGGTAAG+TGG | - | chr7.3:81777689-81777708 | MS.gene056309:intron | 45.0% |
| ! | GGTGCGTTGATGCATATTGA+AGG | + | chr7.3:81777228-81777247 | None:intergenic | 45.0% |
| ! | TCTAAAATCCTTCTGGACCG+TGG | - | chr7.3:81776756-81776775 | MS.gene056309:CDS | 45.0% |
| !! | AGAACCTCTAAGGGTTGATG+TGG | - | chr7.3:81777651-81777670 | MS.gene056309:intron | 45.0% |
| ACGAAGGGTAGGGTTGCATT+AGG | + | chr7.3:81776825-81776844 | None:intergenic | 50.0% | |
| CACCGGAAAAGATGGGTCAA+AGG | - | chr7.3:81777720-81777739 | MS.gene056309:intron | 50.0% | |
| CAGCAATCCACGCATTCATG+CGG | - | chr7.3:81776665-81776684 | MS.gene056309:CDS | 50.0% | |
| CATTTCCGCTCACAGCATGA+CGG | - | chr7.3:81777580-81777599 | MS.gene056309:intron | 50.0% | |
| CCAAACCCGTTGCATTGCAT+TGG | + | chr7.3:81776633-81776652 | None:intergenic | 50.0% | |
| CGCTTCCTTCATCTGTACAG+GGG | - | chr7.3:81777461-81777480 | MS.gene056309:intron | 50.0% | |
| GATGAGAGAGAACGAAGGGT+AGG | + | chr7.3:81776836-81776855 | None:intergenic | 50.0% | |
| GCGCTTCCTTCATCTGTACA+GGG | - | chr7.3:81777460-81777479 | MS.gene056309:intron | 50.0% | |
| GCTTCCTTCATCTGTACAGG+GGG | - | chr7.3:81777462-81777481 | MS.gene056309:intron | 50.0% | |
| TGCCTAGGGTCTGCATCATA+AGG | + | chr7.3:81777562-81777581 | None:intergenic | 50.0% | |
| ! | CCAATGCAATGCAACGGGTT+TGG | - | chr7.3:81776630-81776649 | MS.gene056309:CDS | 50.0% |
| ! | CTTTGACCCATCTTTTCCGG+TGG | + | chr7.3:81777722-81777741 | None:intergenic | 50.0% |
| ! | GCATCATAAGGTAACGGCCT+TGG | + | chr7.3:81777550-81777569 | None:intergenic | 50.0% |
| ! | TCATAAGGTAACGGCCTTGG+AGG | + | chr7.3:81777547-81777566 | None:intergenic | 50.0% |
| AGCCAGCACATCAGTGACCA+CGG | + | chr7.3:81776776-81776795 | None:intergenic | 55.0% | |
| ATCAGTGACCACGGTCCAGA+AGG | + | chr7.3:81776767-81776786 | None:intergenic | 55.0% | |
| CAAGTCCGTCATGCTGTGAG+CGG | + | chr7.3:81777588-81777607 | None:intergenic | 55.0% | |
| CTGTGTCGGATTGTGACAGC+AGG | - | chr7.3:81776794-81776813 | MS.gene056309:CDS | 55.0% | |
| GCGCCTGCATTTCCCTTCTA+CGG | + | chr7.3:81777444-81777463 | None:intergenic | 55.0% | |
| GCTGTGAGCGGAAATGCCTA+GGG | + | chr7.3:81777576-81777595 | None:intergenic | 55.0% | |
| GGCGCTTCCTTCATCTGTAC+AGG | - | chr7.3:81777459-81777478 | MS.gene056309:intron | 55.0% | |
| GTAACGGCCTTGGAGGAGAA+CGG | + | chr7.3:81777540-81777559 | None:intergenic | 55.0% | |
| TGCTGTGAGCGGAAATGCCT+AGG | + | chr7.3:81777577-81777596 | None:intergenic | 55.0% | |
| TGGTTGACCGCATGAATGCG+TGG | + | chr7.3:81776675-81776694 | None:intergenic | 55.0% | |
| !! | CACTGATGTGCTGGCTGTGT+CGG | - | chr7.3:81776780-81776799 | MS.gene056309:CDS | 55.0% |
| AGTGCCAGTATTGCGGTCGG+TGG | - | chr7.3:81778036-81778055 | MS.gene056309:CDS | 60.0% | |
| GACCGTGGTCACTGATGTGC+TGG | - | chr7.3:81776771-81776790 | MS.gene056309:CDS | 60.0% | |
| GCTGCCCCCTGTACAGATGA+AGG | + | chr7.3:81777469-81777488 | None:intergenic | 60.0% | |
| GTGACCACCGACCGCAATAC+TGG | + | chr7.3:81778043-81778062 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 81776338 | 81778080 | 81776338 | ID=MS.gene056309 |
| chr7.3 | mRNA | 81776338 | 81778080 | 81776338 | ID=MS.gene056309.t1;Parent=MS.gene056309 |
| chr7.3 | exon | 81777961 | 81778080 | 81777961 | ID=MS.gene056309.t1.exon1;Parent=MS.gene056309.t1 |
| chr7.3 | CDS | 81777961 | 81778080 | 81777961 | ID=cds.MS.gene056309.t1;Parent=MS.gene056309.t1 |
| chr7.3 | exon | 81776565 | 81776991 | 81776565 | ID=MS.gene056309.t1.exon2;Parent=MS.gene056309.t1 |
| chr7.3 | CDS | 81776565 | 81776991 | 81776565 | ID=cds.MS.gene056309.t1;Parent=MS.gene056309.t1 |
| chr7.3 | exon | 81776338 | 81776390 | 81776338 | ID=MS.gene056309.t1.exon3;Parent=MS.gene056309.t1 |
| chr7.3 | CDS | 81776338 | 81776390 | 81776338 | ID=cds.MS.gene056309.t1;Parent=MS.gene056309.t1 |
| Gene Sequence |
| Protein sequence |
