Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68458.t1 | XP_003591666.2 | 91.7 | 324 | 7 | 3 | 1 | 316 | 1 | 312 | 1.60E-162 | 582 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68458.t1 | Q5ZID6 | 38.4 | 276 | 144 | 5 | 53 | 316 | 54 | 315 | 1.8e-45 | 184.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68458.t1 | A0A396K4N3 | 91.7 | 324 | 7 | 3 | 1 | 316 | 1 | 312 | 1.2e-162 | 582.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene68458 | 0.835146 | 1.99E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene68458 | 0.860818 | 1.58E-63 | -1.69E-46 |
| MS.gene049222 | MS.gene68458 | 0.858946 | 5.81E-63 | -1.69E-46 |
| MS.gene049232 | MS.gene68458 | 0.914501 | 1.78E-84 | -1.69E-46 |
| MS.gene049285 | MS.gene68458 | 0.860641 | 1.79E-63 | -1.69E-46 |
| MS.gene049320 | MS.gene68458 | 0.862299 | 5.59E-64 | -1.69E-46 |
| MS.gene049396 | MS.gene68458 | 0.809585 | 1.76E-50 | -1.69E-46 |
| MS.gene049611 | MS.gene68458 | -0.808097 | 3.66E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene68458 | 0.815202 | 1.04E-51 | -1.69E-46 |
| MS.gene049634 | MS.gene68458 | -0.805019 | 1.63E-49 | -1.69E-46 |
| MS.gene04986 | MS.gene68458 | -0.815773 | 7.79E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene68458 | 0.883518 | 4.19E-71 | -1.69E-46 |
| MS.gene050163 | MS.gene68458 | 0.828085 | 1.09E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene68458 | 0.837496 | 5.02E-57 | -1.69E-46 |
| MS.gene050170 | MS.gene68458 | 0.826485 | 2.64E-54 | -1.69E-46 |
| MS.gene050216 | MS.gene68458 | 0.98995 | 2.24E-180 | -1.69E-46 |
| MS.gene050323 | MS.gene68458 | 0.871529 | 6.37E-67 | -1.69E-46 |
| MS.gene050333 | MS.gene68458 | 0.84514 | 4.89E-59 | -1.69E-46 |
| MS.gene050380 | MS.gene68458 | -0.820683 | 6.03E-53 | -1.69E-46 |
| MS.gene050381 | MS.gene68458 | -0.854596 | 1.11E-61 | -1.69E-46 |
| MS.gene050496 | MS.gene68458 | 0.864834 | 9.14E-65 | -1.69E-46 |
| MS.gene050502 | MS.gene68458 | 0.810713 | 1.01E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene68458 | 0.890904 | 6.46E-74 | -1.69E-46 |
| MS.gene050518 | MS.gene68458 | 0.84789 | 8.68E-60 | -1.69E-46 |
| MS.gene050577 | MS.gene68458 | 0.803753 | 3.00E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene68458 | 0.885569 | 7.26E-72 | -1.69E-46 |
| MS.gene050662 | MS.gene68458 | 0.862048 | 6.67E-64 | -1.69E-46 |
| MS.gene050675 | MS.gene68458 | 0.852243 | 5.25E-61 | -1.69E-46 |
| MS.gene050699 | MS.gene68458 | 0.816177 | 6.33E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene68458 | 0.833473 | 5.23E-56 | -1.69E-46 |
| MS.gene05080 | MS.gene68458 | 0.840052 | 1.10E-57 | -1.69E-46 |
| MS.gene050868 | MS.gene68458 | 0.888494 | 5.62E-73 | -1.69E-46 |
| MS.gene050871 | MS.gene68458 | 0.891204 | 4.92E-74 | -1.69E-46 |
| MS.gene050876 | MS.gene68458 | 0.804055 | 2.60E-49 | -1.69E-46 |
| MS.gene050883 | MS.gene68458 | -0.813971 | 1.95E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene68458 | 0.806227 | 9.11E-50 | -1.69E-46 |
| MS.gene050986 | MS.gene68458 | 0.852559 | 4.26E-61 | -1.69E-46 |
| MS.gene05104 | MS.gene68458 | -0.825674 | 4.12E-54 | -1.69E-46 |
| MS.gene051127 | MS.gene68458 | -0.826844 | 2.17E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene68458 | -0.810959 | 8.89E-51 | -1.69E-46 |
| MS.gene051268 | MS.gene68458 | 0.859948 | 2.91E-63 | -1.69E-46 |
| MS.gene051364 | MS.gene68458 | -0.809239 | 2.09E-50 | -1.69E-46 |
| MS.gene051366 | MS.gene68458 | -0.808291 | 3.33E-50 | -1.69E-46 |
| MS.gene05141 | MS.gene68458 | -0.81311 | 3.02E-51 | -1.69E-46 |
| MS.gene051509 | MS.gene68458 | 0.829091 | 6.25E-55 | -1.69E-46 |
| MS.gene051551 | MS.gene68458 | 0.842755 | 2.13E-58 | -1.69E-46 |
| MS.gene051810 | MS.gene68458 | 0.816406 | 5.62E-52 | -1.69E-46 |
| MS.gene051858 | MS.gene68458 | 0.820811 | 5.63E-53 | -1.69E-46 |
| MS.gene051874 | MS.gene68458 | 0.824089 | 9.75E-54 | -1.69E-46 |
| MS.gene051946 | MS.gene68458 | -0.81366 | 2.29E-51 | -1.69E-46 |
| MS.gene052066 | MS.gene68458 | 0.820808 | 5.64E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene68458 | 0.846273 | 2.41E-59 | -1.69E-46 |
| MS.gene052482 | MS.gene68458 | 0.838179 | 3.35E-57 | -1.69E-46 |
| MS.gene052486 | MS.gene68458 | 0.835551 | 1.57E-56 | -1.69E-46 |
| MS.gene052506 | MS.gene68458 | 0.825714 | 4.03E-54 | -1.69E-46 |
| MS.gene052822 | MS.gene68458 | 0.828621 | 8.12E-55 | -1.69E-46 |
| MS.gene052916 | MS.gene68458 | 0.823333 | 1.47E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene68458 | 0.842924 | 1.92E-58 | -1.69E-46 |
| MS.gene053018 | MS.gene68458 | 0.825135 | 5.53E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene68458 | 0.831832 | 1.33E-55 | -1.69E-46 |
| MS.gene053213 | MS.gene68458 | 0.821084 | 4.87E-53 | -1.69E-46 |
| MS.gene053286 | MS.gene68458 | 0.826314 | 2.90E-54 | -1.69E-46 |
| MS.gene053420 | MS.gene68458 | -0.855617 | 5.59E-62 | -1.69E-46 |
| MS.gene053436 | MS.gene68458 | 0.80011 | 1.68E-48 | -1.69E-46 |
| MS.gene053561 | MS.gene68458 | -0.855577 | 5.75E-62 | -1.69E-46 |
| MS.gene053574 | MS.gene68458 | 0.840397 | 8.91E-58 | -1.69E-46 |
| MS.gene053626 | MS.gene68458 | 0.829494 | 4.99E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene68458 | 0.810847 | 9.40E-51 | -1.69E-46 |
| MS.gene053633 | MS.gene68458 | 0.847402 | 1.18E-59 | -1.69E-46 |
| MS.gene053824 | MS.gene68458 | 0.823585 | 1.28E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene68458 | 0.822204 | 2.68E-53 | -1.69E-46 |
| MS.gene054003 | MS.gene68458 | 0.856292 | 3.55E-62 | -1.69E-46 |
| MS.gene054054 | MS.gene68458 | -0.805798 | 1.12E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene68458 | 0.865347 | 6.31E-65 | -1.69E-46 |
| MS.gene054600 | MS.gene68458 | 0.808319 | 3.28E-50 | -1.69E-46 |
| MS.gene054616 | MS.gene68458 | -0.819739 | 9.92E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene68458 | 0.850419 | 1.72E-60 | -1.69E-46 |
| MS.gene054706 | MS.gene68458 | -0.826409 | 2.76E-54 | -1.69E-46 |
| MS.gene054707 | MS.gene68458 | -0.808802 | 2.59E-50 | -1.69E-46 |
| MS.gene054708 | MS.gene68458 | -0.836633 | 8.34E-57 | -1.69E-46 |
| MS.gene05470 | MS.gene68458 | 0.801764 | 7.72E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene68458 | 0.884291 | 2.17E-71 | -1.69E-46 |
| MS.gene055124 | MS.gene68458 | -0.823459 | 1.37E-53 | -1.69E-46 |
| MS.gene055154 | MS.gene68458 | -0.839747 | 1.32E-57 | -1.69E-46 |
| MS.gene055202 | MS.gene68458 | -0.841511 | 4.55E-58 | -1.69E-46 |
| MS.gene055362 | MS.gene68458 | 0.85015 | 2.05E-60 | -1.69E-46 |
| MS.gene055502 | MS.gene68458 | 0.868171 | 7.96E-66 | -1.69E-46 |
| MS.gene055577 | MS.gene68458 | 0.857405 | 1.67E-62 | -1.69E-46 |
| MS.gene055634 | MS.gene68458 | 0.835845 | 1.32E-56 | -1.69E-46 |
| MS.gene055636 | MS.gene68458 | 0.803837 | 2.88E-49 | -1.69E-46 |
| MS.gene055638 | MS.gene68458 | 0.831237 | 1.87E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene68458 | 0.821807 | 3.32E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene68458 | 0.823461 | 1.37E-53 | -1.69E-46 |
| MS.gene055750 | MS.gene68458 | 0.840388 | 8.96E-58 | -1.69E-46 |
| MS.gene055751 | MS.gene68458 | 0.838584 | 2.64E-57 | -1.69E-46 |
| MS.gene055776 | MS.gene68458 | 0.845884 | 3.07E-59 | -1.69E-46 |
| MS.gene05589 | MS.gene68458 | 0.841557 | 4.42E-58 | -1.69E-46 |
| MS.gene05592 | MS.gene68458 | 0.807087 | 6.00E-50 | -1.69E-46 |
| MS.gene055941 | MS.gene68458 | 0.815723 | 7.99E-52 | -1.69E-46 |
| MS.gene055942 | MS.gene68458 | -0.82565 | 4.18E-54 | -1.69E-46 |
| MS.gene056046 | MS.gene68458 | 0.838966 | 2.10E-57 | -1.69E-46 |
| MS.gene056309 | MS.gene68458 | -0.80376 | 2.99E-49 | -1.69E-46 |
| MS.gene056311 | MS.gene68458 | -0.804578 | 2.02E-49 | -1.69E-46 |
| MS.gene056313 | MS.gene68458 | -0.802645 | 5.08E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene68458 | 0.809073 | 2.27E-50 | -1.69E-46 |
| MS.gene056422 | MS.gene68458 | 0.820457 | 6.79E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene68458 | 0.89454 | 2.24E-75 | -1.69E-46 |
| MS.gene056510 | MS.gene68458 | 0.876 | 1.98E-68 | -1.69E-46 |
| MS.gene056549 | MS.gene68458 | 0.818817 | 1.61E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene68458 | 0.860341 | 2.21E-63 | -1.69E-46 |
| MS.gene056878 | MS.gene68458 | 0.824251 | 8.93E-54 | -1.69E-46 |
| MS.gene057014 | MS.gene68458 | -0.824544 | 7.62E-54 | -1.69E-46 |
| MS.gene057086 | MS.gene68458 | 0.838272 | 3.17E-57 | -1.69E-46 |
| MS.gene057926 | MS.gene68458 | 0.831638 | 1.49E-55 | -1.69E-46 |
| MS.gene058041 | MS.gene68458 | 0.810858 | 9.35E-51 | -1.69E-46 |
| MS.gene058099 | MS.gene68458 | -0.810109 | 1.36E-50 | -1.69E-46 |
| MS.gene058109 | MS.gene68458 | -0.819352 | 1.22E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene68458 | 0.836494 | 9.06E-57 | -1.69E-46 |
| MS.gene058171 | MS.gene68458 | -0.87861 | 2.44E-69 | -1.69E-46 |
| MS.gene058173 | MS.gene68458 | -0.869166 | 3.80E-66 | -1.69E-46 |
| MS.gene058175 | MS.gene68458 | -0.879655 | 1.04E-69 | -1.69E-46 |
| MS.gene058183 | MS.gene68458 | 0.807541 | 4.81E-50 | -1.69E-46 |
| MS.gene058335 | MS.gene68458 | 0.805198 | 1.50E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene68458 | 0.83881 | 2.30E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene68458 | 0.850752 | 1.39E-60 | -1.69E-46 |
| MS.gene058773 | MS.gene68458 | 0.859219 | 4.81E-63 | -1.69E-46 |
| MS.gene058840 | MS.gene68458 | -0.824135 | 9.51E-54 | -1.69E-46 |
| MS.gene05884 | MS.gene68458 | -0.80514 | 1.54E-49 | -1.69E-46 |
| MS.gene058978 | MS.gene68458 | -0.807238 | 5.57E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene68458 | 0.870854 | 1.07E-66 | -1.69E-46 |
| MS.gene059023 | MS.gene68458 | 0.815624 | 8.41E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene68458 | 0.804927 | 1.71E-49 | -1.69E-46 |
| MS.gene059037 | MS.gene68458 | -0.8126 | 3.91E-51 | -1.69E-46 |
| MS.gene059045 | MS.gene68458 | -0.836408 | 9.52E-57 | -1.69E-46 |
| MS.gene05913 | MS.gene68458 | 0.870286 | 1.64E-66 | -1.69E-46 |
| MS.gene059305 | MS.gene68458 | 0.801299 | 9.61E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene68458 | 0.868479 | 6.33E-66 | -1.69E-46 |
| MS.gene059677 | MS.gene68458 | 0.840615 | 7.82E-58 | -1.69E-46 |
| MS.gene059699 | MS.gene68458 | -0.813297 | 2.75E-51 | -1.69E-46 |
| MS.gene059701 | MS.gene68458 | -0.802268 | 6.08E-49 | -1.69E-46 |
| MS.gene059703 | MS.gene68458 | -0.830735 | 2.48E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene68458 | 0.84197 | 3.44E-58 | -1.69E-46 |
| MS.gene059801 | MS.gene68458 | 0.804056 | 2.59E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene68458 | 0.892724 | 1.22E-74 | -1.69E-46 |
| MS.gene059902 | MS.gene68458 | 0.814953 | 1.18E-51 | -1.69E-46 |
| MS.gene059943 | MS.gene68458 | -0.832144 | 1.12E-55 | -1.69E-46 |
| MS.gene06000 | MS.gene68458 | 0.814617 | 1.41E-51 | -1.69E-46 |
| MS.gene060295 | MS.gene68458 | 0.801809 | 7.56E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene68458 | 0.879918 | 8.41E-70 | -1.69E-46 |
| MS.gene060595 | MS.gene68458 | -0.831911 | 1.28E-55 | -1.69E-46 |
| MS.gene060703 | MS.gene68458 | 0.855409 | 6.43E-62 | -1.69E-46 |
| MS.gene060762 | MS.gene68458 | 0.849615 | 2.89E-60 | -1.69E-46 |
| MS.gene060778 | MS.gene68458 | 0.879436 | 1.25E-69 | -1.69E-46 |
| MS.gene06077 | MS.gene68458 | 0.857944 | 1.16E-62 | -1.69E-46 |
| MS.gene060982 | MS.gene68458 | 0.867196 | 1.64E-65 | -1.69E-46 |
| MS.gene061134 | MS.gene68458 | 0.84875 | 5.02E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68458.t1 | MTR_1g090380 | 92.553 | 282 | 6 | 2 | 43 | 316 | 1 | 275 | 0.0 | 528 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68458.t1 | AT2G38680 | 66.084 | 286 | 84 | 5 | 42 | 316 | 40 | 323 | 8.59e-130 | 374 |
Find 63 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAATGGAGGATATCAAAT+TGG | 0.201664 | 1.2:-67581618 | MS.gene68458:CDS |
| ATGCCACATTAACAAAGTTT+TGG | 0.238917 | 1.2:-67581028 | MS.gene68458:CDS |
| CGCTGGTCCTCAAAAGCTTC+AGG | 0.241520 | 1.2:-67581528 | MS.gene68458:intron |
| AGAACCAATGTTCTCCTTCT+TGG | 0.265210 | 1.2:-67579458 | MS.gene68458:CDS |
| TTCATATAACTGCTGCCTTT+TGG | 0.338973 | 1.2:+67580847 | None:intergenic |
| TCACCGAATCGTTCGTGAAC+AGG | 0.376885 | 1.2:+67579521 | None:intergenic |
| AGTTTGTTGTGGAGCAAAAC+AGG | 0.387622 | 1.2:+67581566 | None:intergenic |
| AAATGAGCATGCTCTTGATA+TGG | 0.389669 | 1.2:-67579549 | MS.gene68458:CDS |
| TTGTGGAAAACATTTGGAAA+TGG | 0.410077 | 1.2:-67581633 | MS.gene68458:CDS |
| GAAATGGAGGATATCAAATT+GGG | 0.419430 | 1.2:-67581617 | MS.gene68458:CDS |
| TTCAGAATTGACGCTGGTGG+TGG | 0.419541 | 1.2:-67581594 | MS.gene68458:CDS |
| CCTGTATTAATATTCTCTGC+AGG | 0.422018 | 1.2:-67580247 | MS.gene68458:CDS |
| ACGCATGCTCTTCTTATTGA+AGG | 0.428415 | 1.2:-67580524 | MS.gene68458:CDS |
| CCCTTGGGCTGGAAGAGAAA+AGG | 0.437854 | 1.2:-67580796 | MS.gene68458:CDS |
| CCTGCAGAGAATATTAATAC+AGG | 0.451901 | 1.2:+67580247 | None:intergenic |
| TGGTGATCACACTGGAGACT+TGG | 0.455229 | 1.2:-67579438 | MS.gene68458:CDS |
| GAACGATTCGGTGATATTGA+TGG | 0.458869 | 1.2:-67579512 | MS.gene68458:CDS |
| CTGGATTATCCTGCTGCAAA+AGG | 0.467977 | 1.2:+67580879 | None:intergenic |
| AACCCAAAACTTTGTTAATG+TGG | 0.470399 | 1.2:+67581025 | None:intergenic |
| ATGTGAAGATAGTATCCAAC+AGG | 0.474848 | 1.2:-67580049 | MS.gene68458:CDS |
| CTTGCTGCAATTCGTTCCGC+TGG | 0.481743 | 1.2:-67581545 | MS.gene68458:CDS |
| AGTTGGAGGCGATAGCTCAT+TGG | 0.482900 | 1.2:+67581826 | None:intergenic |
| AGTTGGTGGTGACGATGGAT+TGG | 0.487760 | 1.2:+67581803 | None:intergenic |
| AGCAAGTCATTGTCATCAGT+TGG | 0.490335 | 1.2:+67579488 | None:intergenic |
| TGGTGACGATGGATTGGAGT+TGG | 0.494711 | 1.2:+67581809 | None:intergenic |
| GAGCCTGTTCACGAACGATT+CGG | 0.505027 | 1.2:-67579524 | MS.gene68458:CDS |
| TACGATACTCGAATTTCTGT+GGG | 0.505866 | 1.2:-67579395 | MS.gene68458:CDS |
| TGGAAAACATTTGGAAATGG+AGG | 0.511488 | 1.2:-67581630 | MS.gene68458:CDS |
| CACCTTTAAAAGATACAAGT+TGG | 0.511666 | 1.2:+67580009 | None:intergenic |
| ATCCAGAATATGATGCCAAA+AGG | 0.511735 | 1.2:-67580862 | MS.gene68458:CDS |
| ATTGTTAAATACCATCCTGT+TGG | 0.514081 | 1.2:+67580034 | None:intergenic |
| ATATGAACATTACCATCCAT+TGG | 0.515894 | 1.2:-67580831 | MS.gene68458:CDS |
| CTGTATTAATATTCTCTGCA+GGG | 0.521088 | 1.2:-67580246 | MS.gene68458:CDS |
| GAGTCATTTGTAGGCAGTCA+TGG | 0.540817 | 1.2:-67580902 | MS.gene68458:intron |
| CTCCTTCTTGGTGATCACAC+TGG | 0.541831 | 1.2:-67579446 | MS.gene68458:CDS |
| GGTGATCACACTGGAGACTT+GGG | 0.548044 | 1.2:-67579437 | MS.gene68458:CDS |
| TCAGAATTGACGCTGGTGGT+GGG | 0.550336 | 1.2:-67581593 | MS.gene68458:CDS |
| GAATTGCAGCAAGTTTGTTG+TGG | 0.553040 | 1.2:+67581555 | None:intergenic |
| GCTACACTTCTTCAACATCA+AGG | 0.560582 | 1.2:-67581759 | MS.gene68458:intron |
| AAAGTGACGTGGGAGAAAGT+TGG | 0.564371 | 1.2:+67581786 | None:intergenic |
| GAGAAAGTTGGTGGTGACGA+TGG | 0.566081 | 1.2:+67581798 | None:intergenic |
| TAGGAGAAAATTCCAATGGA+TGG | 0.567633 | 1.2:+67580819 | None:intergenic |
| TGATGTTGAAGAAGTGTAGC+GGG | 0.570667 | 1.2:+67581762 | None:intergenic |
| GGAGACTTGGGAATGTCTGA+TGG | 0.575829 | 1.2:-67579425 | MS.gene68458:CDS |
| TTACGATACTCGAATTTCTG+TGG | 0.585256 | 1.2:-67579396 | MS.gene68458:CDS |
| TGACGATGGATTGGAGTTGG+AGG | 0.602766 | 1.2:+67581812 | None:intergenic |
| AAAGGAAACTCATGGTAGAG+TGG | 0.614036 | 1.2:-67580778 | MS.gene68458:intron |
| TTCTCTTCCAGCCCAAGGGT+AGG | 0.615641 | 1.2:+67580800 | None:intergenic |
| CTCCAGTGTGATCACCAAGA+AGG | 0.618740 | 1.2:+67579444 | None:intergenic |
| CATGCTCTTCTTATTGAAGG+AGG | 0.621492 | 1.2:-67580521 | MS.gene68458:CDS |
| AGGGTAGGAGAAAATTCCAA+TGG | 0.624608 | 1.2:+67580815 | None:intergenic |
| GGAAGAGAAAAGGAAACTCA+TGG | 0.628987 | 1.2:-67580786 | MS.gene68458:CDS |
| GTGACGTGGGAGAAAGTTGG+TGG | 0.633859 | 1.2:+67581789 | None:intergenic |
| GCTTGCTGATATCATTGAAG+AGG | 0.634896 | 1.2:-67580224 | MS.gene68458:intron |
| AACAGGATGGTATTTAACAA+TGG | 0.634907 | 1.2:-67580032 | MS.gene68458:CDS |
| GAAGATAGTATCCAACAGGA+TGG | 0.654156 | 1.2:-67580045 | MS.gene68458:CDS |
| ATCACCAAGAAGGAGAACAT+TGG | 0.655582 | 1.2:+67579454 | None:intergenic |
| GTGTAGCGGGAAAAGTGACG+TGG | 0.663698 | 1.2:+67581775 | None:intergenic |
| ATTGGGTTCAGAATTGACGC+TGG | 0.663874 | 1.2:-67581600 | MS.gene68458:CDS |
| GGGTTCAGAATTGACGCTGG+TGG | 0.671068 | 1.2:-67581597 | MS.gene68458:CDS |
| TTGATGTTGAAGAAGTGTAG+CGG | 0.688175 | 1.2:+67581761 | None:intergenic |
| TAAGTGAGTTCTCAACGTTG+TGG | 0.688216 | 1.2:+67579227 | None:intergenic |
| TGTAGCGGGAAAAGTGACGT+GGG | 0.689625 | 1.2:+67581776 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAAATCTTAGAATT+TGG | + | chr1.2:67579940-67579959 | None:intergenic | 10.0% |
| !! | AAATATAAATCTTAGAATTT+GGG | + | chr1.2:67579939-67579958 | None:intergenic | 10.0% |
| !!! | ATGTAATTTTTTTTCTTTTA+AGG | - | chr1.2:67579339-67579358 | MS.gene68458:intron | 10.0% |
| !!! | ATTTATATTTTCTTTTTTGT+AGG | - | chr1.2:67579949-67579968 | MS.gene68458:intron | 10.0% |
| !!! | CTGTTTTTTTTTTTTTTTAT+GGG | - | chr1.2:67580324-67580343 | MS.gene68458:intron | 10.0% |
| !!! | TCTGTTTTTTTTTTTTTTTA+TGG | - | chr1.2:67580323-67580342 | MS.gene68458:intron | 10.0% |
| !!! | TGTAATTTTTTTTCTTTTAA+GGG | - | chr1.2:67579340-67579359 | MS.gene68458:intron | 10.0% |
| !! | AAAAAAAATTACATGCAATA+AGG | + | chr1.2:67579333-67579352 | None:intergenic | 15.0% |
| !! | AAAAAAATTACATGCAATAA+GGG | + | chr1.2:67579332-67579351 | None:intergenic | 15.0% |
| !! | AAAATAACAAAATGGAAAAA+TGG | + | chr1.2:67580732-67580751 | None:intergenic | 15.0% |
| !! | TATATTTGTCAAAAGAAAAA+TGG | + | chr1.2:67580617-67580636 | None:intergenic | 15.0% |
| !!! | TCATCTTAAGTTTTTATATT+CGG | + | chr1.2:67579817-67579836 | None:intergenic | 15.0% |
| !! | AAAAAATTACATGCAATAAG+GGG | + | chr1.2:67579331-67579350 | None:intergenic | 20.0% |
| !! | AAACTCAATTATCAATGAAA+TGG | + | chr1.2:67579525-67579544 | None:intergenic | 20.0% |
| !! | AACTCAATTATCAATGAAAT+GGG | + | chr1.2:67579524-67579543 | None:intergenic | 20.0% |
| !! | AATACACAATAAATGAAAGT+TGG | + | chr1.2:67581043-67581062 | None:intergenic | 20.0% |
| !! | CAGAAAAAAAAATTAAGTCA+GGG | + | chr1.2:67581746-67581765 | None:intergenic | 20.0% |
| !! | CATAATAATTAATTGCCTTT+AGG | - | chr1.2:67581123-67581142 | MS.gene68458:intron | 20.0% |
| !! | TAATTGCATAACACAAAATT+GGG | - | chr1.2:67579589-67579608 | MS.gene68458:intron | 20.0% |
| !! | TTTCCTGAAAAATAACAAAA+TGG | + | chr1.2:67580740-67580759 | None:intergenic | 20.0% |
| !!! | AAGTCTATTTTGTTTTATGT+TGG | - | chr1.2:67580820-67580839 | MS.gene68458:CDS | 20.0% |
| !!! | TATGCAAATATATTTTTCAG+AGG | - | chr1.2:67581088-67581107 | MS.gene68458:intron | 20.0% |
| !!! | TGATATGTTCATTTTATATC+AGG | - | chr1.2:67580650-67580669 | MS.gene68458:intron | 20.0% |
| !!! | TTAAGATTTGGTGTATTATT+AGG | - | chr1.2:67580459-67580478 | MS.gene68458:CDS | 20.0% |
| !!! | TTTCCATTTTGTTATTTTTC+AGG | - | chr1.2:67580734-67580753 | MS.gene68458:intron | 20.0% |
| ! | AAAAATTACATGCAATAAGG+GGG | + | chr1.2:67579330-67579349 | None:intergenic | 25.0% |
| ! | AAATTCTCAATCCTACAAAA+CGG | + | chr1.2:67579913-67579932 | None:intergenic | 25.0% |
| ! | AATAGTCATGTAACATACTT+TGG | + | chr1.2:67580030-67580049 | None:intergenic | 25.0% |
| ! | ACTCAATTATCAATGAAATG+GGG | + | chr1.2:67579523-67579542 | None:intergenic | 25.0% |
| ! | ATTTAATTATGTTTAAGCCC+TGG | - | chr1.2:67581193-67581212 | MS.gene68458:intron | 25.0% |
| ! | CAAGCATTATTATATAGTGT+GGG | + | chr1.2:67579695-67579714 | None:intergenic | 25.0% |
| ! | CCAGAAAAAAAAATTAAGTC+AGG | + | chr1.2:67581747-67581766 | None:intergenic | 25.0% |
| ! | GTAATTGCATAACACAAAAT+TGG | - | chr1.2:67579588-67579607 | MS.gene68458:intron | 25.0% |
| ! | TAATTATTATGTAATTCCCC+CGG | + | chr1.2:67581114-67581133 | None:intergenic | 25.0% |
| ! | TCAAGCATTATTATATAGTG+TGG | + | chr1.2:67579696-67579715 | None:intergenic | 25.0% |
| ! | TGTAAAATTGAGATACTAGT+GGG | - | chr1.2:67579743-67579762 | MS.gene68458:intron | 25.0% |
| ! | TTGTAAAATTGAGATACTAG+TGG | - | chr1.2:67579742-67579761 | MS.gene68458:intron | 25.0% |
| ! | TTTATTGTGTATTTGTTTGC+TGG | - | chr1.2:67581050-67581069 | MS.gene68458:intron | 25.0% |
| !! | ATACTATCTTCACATTTTGA+AGG | + | chr1.2:67580961-67580980 | None:intergenic | 25.0% |
| !! | ATTTCTCTTCATTTTCTTGT+CGG | - | chr1.2:67580857-67580876 | MS.gene68458:CDS | 25.0% |
| !! | ATTTTGTATAGGAGAAAACA+AGG | + | chr1.2:67581321-67581340 | None:intergenic | 25.0% |
| !! | GTATCTCAATTTTACAAAAG+TGG | + | chr1.2:67579739-67579758 | None:intergenic | 25.0% |
| !! | TAATGCTAACATAGCTTTTA+GGG | - | chr1.2:67580550-67580569 | MS.gene68458:intron | 25.0% |
| !! | TCGAAAATCTGATTTTGTAT+AGG | + | chr1.2:67581332-67581351 | None:intergenic | 25.0% |
| !!! | ATTTTGTTGTGGAAAACATT+TGG | - | chr1.2:67579376-67579395 | MS.gene68458:intron | 25.0% |
| !!! | CCTGACTTAATTTTTTTTTC+TGG | - | chr1.2:67581744-67581763 | MS.gene68458:intron | 25.0% |
| !!! | TATTTTGTTTTATGTTGGCA+AGG | - | chr1.2:67580825-67580844 | MS.gene68458:CDS | 25.0% |
| !!! | TGTTTAAGAGTCTCATTTTT+GGG | - | chr1.2:67579776-67579795 | MS.gene68458:intron | 25.0% |
| !!! | TTAACAAAGTTTTGGGTTAA+TGG | - | chr1.2:67579995-67580014 | MS.gene68458:intron | 25.0% |
| AAAATTACATGCAATAAGGG+GGG | + | chr1.2:67579329-67579348 | None:intergenic | 30.0% | |
| AAAGGTAAAAAAGAGAAGAG+GGG | + | chr1.2:67579300-67579319 | None:intergenic | 30.0% | |
| AACAGGATGGTATTTAACAA+TGG | - | chr1.2:67580983-67581002 | MS.gene68458:intron | 30.0% | |
| AACCCAAAACTTTGTTAATG+TGG | + | chr1.2:67579993-67580012 | None:intergenic | 30.0% | |
| ATATGAACATTACCATCCAT+TGG | - | chr1.2:67580184-67580203 | MS.gene68458:intron | 30.0% | |
| ATTGTTAAATACCATCCTGT+TGG | + | chr1.2:67580984-67581003 | None:intergenic | 30.0% | |
| CTCCAAAAATTCAAAAAGCT+CGG | + | chr1.2:67580585-67580604 | None:intergenic | 30.0% | |
| CTGTATTAATATTCTCTGCA+GGG | - | chr1.2:67580769-67580788 | MS.gene68458:intron | 30.0% | |
| GAAAGGTAAAAAAGAGAAGA+GGG | + | chr1.2:67579301-67579320 | None:intergenic | 30.0% | |
| GAAATGGAGGATATCAAATT+GGG | - | chr1.2:67579398-67579417 | MS.gene68458:CDS | 30.0% | |
| GAGCTCAATTAATGTCTATA+AGG | - | chr1.2:67581698-67581717 | MS.gene68458:intron | 30.0% | |
| GATCAAGTCACAATCATAAA+TGG | + | chr1.2:67581724-67581743 | None:intergenic | 30.0% | |
| GTAACTAGTAAGTAAACTCT+GGG | + | chr1.2:67580370-67580389 | None:intergenic | 30.0% | |
| TAACTAGTAAGTAAACTCTG+GGG | + | chr1.2:67580369-67580388 | None:intergenic | 30.0% | |
| TATCTAATCGAGTCATTTGT+AGG | - | chr1.2:67580104-67580123 | MS.gene68458:intron | 30.0% | |
| TCCAATATTAACAGGTTCTA+AGG | - | chr1.2:67580919-67580938 | MS.gene68458:intron | 30.0% | |
| TGATGCTGTAACTTAAGATT+TGG | - | chr1.2:67580447-67580466 | MS.gene68458:CDS | 30.0% | |
| TGTAACTAGTAAGTAAACTC+TGG | + | chr1.2:67580371-67580390 | None:intergenic | 30.0% | |
| TTGTGGAAAACATTTGGAAA+TGG | - | chr1.2:67579382-67579401 | MS.gene68458:intron | 30.0% | |
| ! | ATGCCACATTAACAAAGTTT+TGG | - | chr1.2:67579987-67580006 | MS.gene68458:intron | 30.0% |
| ! | CACCTTTAAAAGATACAAGT+TGG | + | chr1.2:67581009-67581028 | None:intergenic | 30.0% |
| ! | CTAATGCTAACATAGCTTTT+AGG | - | chr1.2:67580549-67580568 | MS.gene68458:intron | 30.0% |
| ! | GTGTTTAAGAGTCTCATTTT+TGG | - | chr1.2:67579775-67579794 | MS.gene68458:intron | 30.0% |
| ! | TCCTAATTTTTGACGTGTAA+GGG | + | chr1.2:67580072-67580091 | None:intergenic | 30.0% |
| ! | TCGTTTTCTACATTTTGTTG+TGG | - | chr1.2:67579365-67579384 | MS.gene68458:intron | 30.0% |
| ! | TGCCACATTAACAAAGTTTT+GGG | - | chr1.2:67579988-67580007 | MS.gene68458:intron | 30.0% |
| ! | TTCCGAGCTTTTTGAATTTT+TGG | - | chr1.2:67580580-67580599 | MS.gene68458:intron | 30.0% |
| ! | TTCCTAATTTTTGACGTGTA+AGG | + | chr1.2:67580073-67580092 | None:intergenic | 30.0% |
| !! | AAATATATTTTTCAGAGGCC+GGG | - | chr1.2:67581093-67581112 | MS.gene68458:intron | 30.0% |
| !! | AGATTTGGTGTATTATTAGG+TGG | - | chr1.2:67580462-67580481 | MS.gene68458:CDS | 30.0% |
| !! | ATTTGGTGTATTATTAGGTG+GGG | - | chr1.2:67580464-67580483 | MS.gene68458:CDS | 30.0% |
| !! | CAAATATATTTTTCAGAGGC+CGG | - | chr1.2:67581092-67581111 | MS.gene68458:intron | 30.0% |
| !! | GATTTGGTGTATTATTAGGT+GGG | - | chr1.2:67580463-67580482 | MS.gene68458:CDS | 30.0% |
| !! | TACTTCTCAATTTTGATCAC+AGG | - | chr1.2:67581419-67581438 | MS.gene68458:intron | 30.0% |
| !!! | CGCTTTTTTCCAATATTAAC+AGG | - | chr1.2:67580911-67580930 | MS.gene68458:intron | 30.0% |
| AAATCACAGCAATTAGAGTC+TGG | + | chr1.2:67581668-67581687 | None:intergenic | 35.0% | |
| AAATGAGCATGCTCTTGATA+TGG | - | chr1.2:67581466-67581485 | MS.gene68458:intron | 35.0% | |
| AACTAGTAAGTAAACTCTGG+GGG | + | chr1.2:67580368-67580387 | None:intergenic | 35.0% | |
| AAGGTAAAAAAGAGAAGAGG+GGG | + | chr1.2:67579299-67579318 | None:intergenic | 35.0% | |
| ATCCAGAATATGATGCCAAA+AGG | - | chr1.2:67580153-67580172 | MS.gene68458:intron | 35.0% | |
| ATGTGAAGATAGTATCCAAC+AGG | - | chr1.2:67580966-67580985 | MS.gene68458:intron | 35.0% | |
| ATTGAATATCACTGTACCTC+TGG | + | chr1.2:67580414-67580433 | None:intergenic | 35.0% | |
| CCTGCAGAGAATATTAATAC+AGG | + | chr1.2:67580771-67580790 | None:intergenic | 35.0% | |
| CCTGTATTAATATTCTCTGC+AGG | - | chr1.2:67580768-67580787 | MS.gene68458:intron | 35.0% | |
| GCCTTAGAACCTGTTAATAT+TGG | + | chr1.2:67580923-67580942 | None:intergenic | 35.0% | |
| GGAAAGGTAAAAAAGAGAAG+AGG | + | chr1.2:67579302-67579321 | None:intergenic | 35.0% | |
| GGAAATGGAGGATATCAAAT+TGG | - | chr1.2:67579397-67579416 | MS.gene68458:CDS | 35.0% | |
| GTATTACCAGTGAAACCTAA+AGG | + | chr1.2:67581141-67581160 | None:intergenic | 35.0% | |
| TACGATACTCGAATTTCTGT+GGG | - | chr1.2:67581620-67581639 | MS.gene68458:CDS | 35.0% | |
| TAGGAGAAAATTCCAATGGA+TGG | + | chr1.2:67580199-67580218 | None:intergenic | 35.0% | |
| TCCCTTACACGTCAAAAATT+AGG | - | chr1.2:67580068-67580087 | MS.gene68458:intron | 35.0% | |
| TGGAAAACATTTGGAAATGG+AGG | - | chr1.2:67579385-67579404 | MS.gene68458:intron | 35.0% | |
| TTACGATACTCGAATTTCTG+TGG | - | chr1.2:67581619-67581638 | MS.gene68458:CDS | 35.0% | |
| ! | ACCTTACAAATCCGTTTTGT+AGG | - | chr1.2:67579899-67579918 | MS.gene68458:intron | 35.0% |
| ! | CAATGCTGGTCTACATATAT+AGG | - | chr1.2:67580277-67580296 | MS.gene68458:intron | 35.0% |
| ! | GAAAAAACCTGAAGCTTTTG+AGG | + | chr1.2:67579497-67579516 | None:intergenic | 35.0% |
| ! | GGCCAACTTGTATCTTTTAA+AGG | - | chr1.2:67581004-67581023 | MS.gene68458:intron | 35.0% |
| ! | TAATTGCCTTTAGGTTTCAC+TGG | - | chr1.2:67581132-67581151 | MS.gene68458:intron | 35.0% |
| ! | TCCTACAAAACGGATTTGTA+AGG | + | chr1.2:67579903-67579922 | None:intergenic | 35.0% |
| ! | TTCATATAACTGCTGCCTTT+TGG | + | chr1.2:67580171-67580190 | None:intergenic | 35.0% |
| ! | TTGATGTTGAAGAAGTGTAG+CGG | + | chr1.2:67579257-67579276 | None:intergenic | 35.0% |
| !! | AATATATTTTTCAGAGGCCG+GGG | - | chr1.2:67581094-67581113 | MS.gene68458:intron | 35.0% |
| !! | CGAGCTTTTTGAATTTTTGG+AGG | - | chr1.2:67580583-67580602 | MS.gene68458:intron | 35.0% |
| !! | CTGGTATTTTGAATTGTTGC+AGG | - | chr1.2:67581763-67581782 | MS.gene68458:CDS | 35.0% |
| !! | TAAGAGTCTCATTTTTGGGA+GGG | - | chr1.2:67579780-67579799 | MS.gene68458:intron | 35.0% |
| !! | TTAAGAGTCTCATTTTTGGG+AGG | - | chr1.2:67579779-67579798 | MS.gene68458:intron | 35.0% |
| AAAGGAAACTCATGGTAGAG+TGG | - | chr1.2:67580237-67580256 | MS.gene68458:CDS | 40.0% | |
| ACGCATGCTCTTCTTATTGA+AGG | - | chr1.2:67580491-67580510 | MS.gene68458:CDS | 40.0% | |
| AGAACCAATGTTCTCCTTCT+TGG | - | chr1.2:67581557-67581576 | MS.gene68458:CDS | 40.0% | |
| AGCAAGTCATTGTCATCAGT+TGG | + | chr1.2:67581530-67581549 | None:intergenic | 40.0% | |
| AGGGTAGGAGAAAATTCCAA+TGG | + | chr1.2:67580203-67580222 | None:intergenic | 40.0% | |
| ATCACCAAGAAGGAGAACAT+TGG | + | chr1.2:67581564-67581583 | None:intergenic | 40.0% | |
| CATGCTCTTCTTATTGAAGG+AGG | - | chr1.2:67580494-67580513 | MS.gene68458:CDS | 40.0% | |
| GAAGATAGTATCCAACAGGA+TGG | - | chr1.2:67580970-67580989 | MS.gene68458:intron | 40.0% | |
| GAAGATTCGATTGCTGACAT+TGG | - | chr1.2:67580703-67580722 | MS.gene68458:intron | 40.0% | |
| GCTACACTTCTTCAACATCA+AGG | - | chr1.2:67579256-67579275 | MS.gene68458:intron | 40.0% | |
| GGAAGAGAAAAGGAAACTCA+TGG | - | chr1.2:67580229-67580248 | MS.gene68458:CDS | 40.0% | |
| TAAGTGAGTTCTCAACGTTG+TGG | + | chr1.2:67581791-67581810 | None:intergenic | 40.0% | |
| TATATAGTGTGGGACTTCTC+AGG | + | chr1.2:67579685-67579704 | None:intergenic | 40.0% | |
| TGGTAGAGTGGTATGTGATT+CGG | - | chr1.2:67580249-67580268 | MS.gene68458:CDS | 40.0% | |
| ! | GCTTGCTGATATCATTGAAG+AGG | - | chr1.2:67580791-67580810 | MS.gene68458:CDS | 40.0% |
| ! | TGATGTTGAAGAAGTGTAGC+GGG | + | chr1.2:67579256-67579275 | None:intergenic | 40.0% |
| ! | TGCCTTTTGGCATCATATTC+TGG | + | chr1.2:67580158-67580177 | None:intergenic | 40.0% |
| ! | TGGAATTTTCTCCTACCCTT+GGG | - | chr1.2:67580204-67580223 | MS.gene68458:intron | 40.0% |
| ! | TTGGAATTTTCTCCTACCCT+TGG | - | chr1.2:67580203-67580222 | MS.gene68458:intron | 40.0% |
| !! | AGTTTGTTGTGGAGCAAAAC+AGG | + | chr1.2:67579452-67579471 | None:intergenic | 40.0% |
| !! | ATATATTTTTCAGAGGCCGG+GGG | - | chr1.2:67581095-67581114 | MS.gene68458:intron | 40.0% |
| !! | GAACGATTCGGTGATATTGA+TGG | - | chr1.2:67581503-67581522 | MS.gene68458:intron | 40.0% |
| !! | GAATTGCAGCAAGTTTGTTG+TGG | + | chr1.2:67579463-67579482 | None:intergenic | 40.0% |
| !! | GCTAACATAGCTTTTAGGGA+AGG | - | chr1.2:67580554-67580573 | MS.gene68458:intron | 40.0% |
| !!! | TTTTGGGTTAATGGAACTCG+CGG | - | chr1.2:67580004-67580023 | MS.gene68458:intron | 40.0% |
| AAAGTGACGTGGGAGAAAGT+TGG | + | chr1.2:67579232-67579251 | None:intergenic | 45.0% | |
| AGAGGGGGTGAAGAAGAAAA+AGG | + | chr1.2:67579284-67579303 | None:intergenic | 45.0% | |
| ATTGGGTTCAGAATTGACGC+TGG | - | chr1.2:67579415-67579434 | MS.gene68458:CDS | 45.0% | |
| CTGGATTATCCTGCTGCAAA+AGG | + | chr1.2:67580139-67580158 | None:intergenic | 45.0% | |
| GAGTCATTTGTAGGCAGTCA+TGG | - | chr1.2:67580113-67580132 | MS.gene68458:intron | 45.0% | |
| GAGTGTGACTCGATTGATCT+TGG | + | chr1.2:67579853-67579872 | None:intergenic | 45.0% | |
| ! | TCACACATTTTGTGCACCAG+AGG | - | chr1.2:67580395-67580414 | MS.gene68458:intron | 45.0% |
| !! | ACGTGTAAGGGAGCATTAGA+GGG | + | chr1.2:67580060-67580079 | None:intergenic | 45.0% |
| !! | GTGATTCGGTTTCTCAATGC+TGG | - | chr1.2:67580263-67580282 | MS.gene68458:intron | 45.0% |
| !! | TTTTTCAGACTCACTCGCCA+GGG | + | chr1.2:67581213-67581232 | None:intergenic | 45.0% |
| !!! | TTTTTTCAGACTCACTCGCC+AGG | + | chr1.2:67581214-67581233 | None:intergenic | 45.0% |
| ACACTCCAAATGTGCAGTGG+TGG | - | chr1.2:67579867-67579886 | MS.gene68458:intron | 50.0% | |
| CACTCCAAATGTGCAGTGGT+GGG | - | chr1.2:67579868-67579887 | MS.gene68458:intron | 50.0% | |
| CTCCAGTGTGATCACCAAGA+AGG | + | chr1.2:67581574-67581593 | None:intergenic | 50.0% | |
| GAGCCTGTTCACGAACGATT+CGG | - | chr1.2:67581491-67581510 | MS.gene68458:intron | 50.0% | |
| GGAGACTTGGGAATGTCTGA+TGG | - | chr1.2:67581590-67581609 | MS.gene68458:CDS | 50.0% | |
| GGTGATCACACTGGAGACTT+GGG | - | chr1.2:67581578-67581597 | MS.gene68458:CDS | 50.0% | |
| GTCACACTCCAAATGTGCAG+TGG | - | chr1.2:67579864-67579883 | MS.gene68458:intron | 50.0% | |
| TCACCGAATCGTTCGTGAAC+AGG | + | chr1.2:67581497-67581516 | None:intergenic | 50.0% | |
| TCAGAATTGACGCTGGTGGT+GGG | - | chr1.2:67579422-67579441 | MS.gene68458:CDS | 50.0% | |
| TGGTGATCACACTGGAGACT+TGG | - | chr1.2:67581577-67581596 | MS.gene68458:CDS | 50.0% | |
| TTCAGAATTGACGCTGGTGG+TGG | - | chr1.2:67579421-67579440 | MS.gene68458:CDS | 50.0% | |
| ! | ACATGCAATAAGGGGGGTGT+AGG | + | chr1.2:67579323-67579342 | None:intergenic | 50.0% |
| ! | ATTTTCTCCTACCCTTGGGC+TGG | - | chr1.2:67580208-67580227 | MS.gene68458:intron | 50.0% |
| ! | CAATAAGGGGGGTGTAGGAA+AGG | + | chr1.2:67579318-67579337 | None:intergenic | 50.0% |
| ! | CCTTTTCTCTTCCAGCCCAA+GGG | + | chr1.2:67580222-67580241 | None:intergenic | 50.0% |
| ! | CTCCTTCTTGGTGATCACAC+TGG | - | chr1.2:67581569-67581588 | MS.gene68458:CDS | 50.0% |
| ! | TCCTTTTCTCTTCCAGCCCA+AGG | + | chr1.2:67580223-67580242 | None:intergenic | 50.0% |
| ! | TGTAGCGGGAAAAGTGACGT+GGG | + | chr1.2:67579242-67579261 | None:intergenic | 50.0% |
| ! | TTGAGATACTAGTGGGCGTG+AGG | - | chr1.2:67579750-67579769 | MS.gene68458:intron | 50.0% |
| !! | AGTTGGTGGTGACGATGGAT+TGG | + | chr1.2:67579215-67579234 | None:intergenic | 50.0% |
| !! | CGTGTAAGGGAGCATTAGAG+GGG | + | chr1.2:67580059-67580078 | None:intergenic | 50.0% |
| !! | CTGAAGCTTTTGAGGACCAG+CGG | + | chr1.2:67579489-67579508 | None:intergenic | 50.0% |
| !! | GACGTGTAAGGGAGCATTAG+AGG | + | chr1.2:67580061-67580080 | None:intergenic | 50.0% |
| !! | GAGAAAGTTGGTGGTGACGA+TGG | + | chr1.2:67579220-67579239 | None:intergenic | 50.0% |
| !! | TGACGATGGATTGGAGTTGG+AGG | + | chr1.2:67579206-67579225 | None:intergenic | 50.0% |
| !! | TGGTGACGATGGATTGGAGT+TGG | + | chr1.2:67579209-67579228 | None:intergenic | 50.0% |
| ACTGCCCACCACTGCACATT+TGG | + | chr1.2:67579875-67579894 | None:intergenic | 55.0% | |
| CGCTGGTCCTCAAAAGCTTC+AGG | - | chr1.2:67579487-67579506 | MS.gene68458:CDS | 55.0% | |
| CTTGCTGCAATTCGTTCCGC+TGG | - | chr1.2:67579470-67579489 | MS.gene68458:CDS | 55.0% | |
| GGGTTCAGAATTGACGCTGG+TGG | - | chr1.2:67579418-67579437 | MS.gene68458:CDS | 55.0% | |
| GTGACGTGGGAGAAAGTTGG+TGG | + | chr1.2:67579229-67579248 | None:intergenic | 55.0% | |
| TTCTCTTCCAGCCCAAGGGT+AGG | + | chr1.2:67580218-67580237 | None:intergenic | 55.0% | |
| ! | AGATACTAGTGGGCGTGAGG+TGG | - | chr1.2:67579753-67579772 | MS.gene68458:intron | 55.0% |
| ! | CAGTCATGGCCTTTTGCAGC+AGG | - | chr1.2:67580127-67580146 | MS.gene68458:intron | 55.0% |
| ! | CCCTTGGGCTGGAAGAGAAA+AGG | - | chr1.2:67580219-67580238 | MS.gene68458:intron | 55.0% |
| ! | GTGTAGCGGGAAAAGTGACG+TGG | + | chr1.2:67579243-67579262 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 67579192 | 67581845 | 67579192 | ID=MS.gene68458 |
| chr1.2 | mRNA | 67579192 | 67581845 | 67579192 | ID=MS.gene68458.t1;Parent=MS.gene68458 |
| chr1.2 | exon | 67581760 | 67581845 | 67581760 | ID=MS.gene68458.t1.exon1;Parent=MS.gene68458.t1 |
| chr1.2 | CDS | 67581760 | 67581845 | 67581760 | ID=cds.MS.gene68458.t1;Parent=MS.gene68458.t1 |
| chr1.2 | exon | 67581529 | 67581676 | 67581529 | ID=MS.gene68458.t1.exon2;Parent=MS.gene68458.t1 |
| chr1.2 | CDS | 67581529 | 67581676 | 67581529 | ID=cds.MS.gene68458.t1;Parent=MS.gene68458.t1 |
| chr1.2 | exon | 67581006 | 67581066 | 67581006 | ID=MS.gene68458.t1.exon3;Parent=MS.gene68458.t1 |
| chr1.2 | CDS | 67581006 | 67581066 | 67581006 | ID=cds.MS.gene68458.t1;Parent=MS.gene68458.t1 |
| chr1.2 | exon | 67580779 | 67580911 | 67580779 | ID=MS.gene68458.t1.exon4;Parent=MS.gene68458.t1 |
| chr1.2 | CDS | 67580779 | 67580911 | 67580779 | ID=cds.MS.gene68458.t1;Parent=MS.gene68458.t1 |
| chr1.2 | exon | 67580433 | 67580556 | 67580433 | ID=MS.gene68458.t1.exon5;Parent=MS.gene68458.t1 |
| chr1.2 | CDS | 67580433 | 67580556 | 67580433 | ID=cds.MS.gene68458.t1;Parent=MS.gene68458.t1 |
| chr1.2 | exon | 67580225 | 67580281 | 67580225 | ID=MS.gene68458.t1.exon6;Parent=MS.gene68458.t1 |
| chr1.2 | CDS | 67580225 | 67580281 | 67580225 | ID=cds.MS.gene68458.t1;Parent=MS.gene68458.t1 |
| chr1.2 | exon | 67580012 | 67580081 | 67580012 | ID=MS.gene68458.t1.exon7;Parent=MS.gene68458.t1 |
| chr1.2 | CDS | 67580012 | 67580081 | 67580012 | ID=cds.MS.gene68458.t1;Parent=MS.gene68458.t1 |
| chr1.2 | exon | 67579389 | 67579596 | 67579389 | ID=MS.gene68458.t1.exon8;Parent=MS.gene68458.t1 |
| chr1.2 | CDS | 67579389 | 67579596 | 67579389 | ID=cds.MS.gene68458.t1;Parent=MS.gene68458.t1 |
| chr1.2 | exon | 67579192 | 67579252 | 67579192 | ID=MS.gene68458.t1.exon9;Parent=MS.gene68458.t1 |
| chr1.2 | CDS | 67579192 | 67579252 | 67579192 | ID=cds.MS.gene68458.t1;Parent=MS.gene68458.t1 |
| Gene Sequence |
| Protein sequence |
