Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38155.t1 | XP_003618025.2 | 97.8 | 365 | 8 | 0 | 1 | 365 | 1 | 365 | 1.80E-205 | 724.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38155.t1 | Q00763 | 67.2 | 354 | 115 | 1 | 12 | 365 | 13 | 365 | 4.2e-142 | 505.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38155.t1 | G7K511 | 97.8 | 365 | 8 | 0 | 1 | 365 | 1 | 365 | 1.3e-205 | 724.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene38155 | -0.816838 | 4.50E-52 | -1.69E-46 |
| MS.gene049259 | MS.gene38155 | 0.815737 | 7.93E-52 | -1.69E-46 |
| MS.gene049483 | MS.gene38155 | 0.822498 | 2.29E-53 | -1.69E-46 |
| MS.gene049611 | MS.gene38155 | 0.825438 | 4.69E-54 | -1.69E-46 |
| MS.gene049634 | MS.gene38155 | 0.833778 | 4.39E-56 | -1.69E-46 |
| MS.gene050216 | MS.gene38155 | -0.857408 | 1.67E-62 | -1.69E-46 |
| MS.gene050380 | MS.gene38155 | 0.835674 | 1.46E-56 | -1.69E-46 |
| MS.gene050381 | MS.gene38155 | 0.888956 | 3.72E-73 | -1.69E-46 |
| MS.gene050504 | MS.gene38155 | -0.819219 | 1.30E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene38155 | -0.812933 | 3.30E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene38155 | -0.834715 | 2.55E-56 | -1.69E-46 |
| MS.gene050871 | MS.gene38155 | -0.836879 | 7.23E-57 | -1.69E-46 |
| MS.gene050883 | MS.gene38155 | 0.842352 | 2.73E-58 | -1.69E-46 |
| MS.gene051044 | MS.gene38155 | 0.810936 | 9.00E-51 | -1.69E-46 |
| MS.gene051127 | MS.gene38155 | 0.870777 | 1.13E-66 | -1.69E-46 |
| MS.gene051138 | MS.gene38155 | 0.844286 | 8.30E-59 | -1.69E-46 |
| MS.gene051268 | MS.gene38155 | -0.820159 | 7.95E-53 | -1.69E-46 |
| MS.gene05141 | MS.gene38155 | 0.823397 | 1.42E-53 | -1.69E-46 |
| MS.gene051863 | MS.gene38155 | 0.800027 | 1.75E-48 | -1.69E-46 |
| MS.gene051946 | MS.gene38155 | 0.837397 | 5.33E-57 | -1.69E-46 |
| MS.gene052802 | MS.gene38155 | 0.80068 | 1.29E-48 | -1.69E-46 |
| MS.gene053069 | MS.gene38155 | 0.830692 | 2.55E-55 | -1.69E-46 |
| MS.gene053420 | MS.gene38155 | 0.884323 | 2.12E-71 | -1.69E-46 |
| MS.gene053488 | MS.gene38155 | 0.806913 | 6.53E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene38155 | 0.859077 | 5.31E-63 | -1.69E-46 |
| MS.gene054056 | MS.gene38155 | 0.804581 | 2.02E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene38155 | -0.800876 | 1.17E-48 | -1.69E-46 |
| MS.gene054616 | MS.gene38155 | 0.808457 | 3.07E-50 | -1.69E-46 |
| MS.gene054706 | MS.gene38155 | 0.813112 | 3.02E-51 | -1.69E-46 |
| MS.gene054707 | MS.gene38155 | 0.812536 | 4.04E-51 | -1.69E-46 |
| MS.gene054708 | MS.gene38155 | 0.848027 | 7.96E-60 | -1.69E-46 |
| MS.gene055124 | MS.gene38155 | 0.883135 | 5.80E-71 | -1.69E-46 |
| MS.gene055139 | MS.gene38155 | 0.813165 | 2.94E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene38155 | 0.847367 | 1.21E-59 | -1.69E-46 |
| MS.gene055202 | MS.gene38155 | 0.885927 | 5.33E-72 | -1.69E-46 |
| MS.gene05589 | MS.gene38155 | -0.806389 | 8.43E-50 | -1.69E-46 |
| MS.gene055959 | MS.gene38155 | 0.831377 | 1.73E-55 | -1.69E-46 |
| MS.gene056224 | MS.gene38155 | 0.814032 | 1.89E-51 | -1.69E-46 |
| MS.gene056298 | MS.gene38155 | 0.812251 | 4.66E-51 | -1.69E-46 |
| MS.gene056309 | MS.gene38155 | 0.803571 | 3.27E-49 | -1.69E-46 |
| MS.gene056310 | MS.gene38155 | 0.836668 | 8.18E-57 | -1.69E-46 |
| MS.gene056311 | MS.gene38155 | 0.845733 | 3.38E-59 | -1.69E-46 |
| MS.gene056313 | MS.gene38155 | 0.857792 | 1.28E-62 | -1.69E-46 |
| MS.gene056504 | MS.gene38155 | -0.82062 | 6.23E-53 | -1.69E-46 |
| MS.gene057014 | MS.gene38155 | 0.843741 | 1.16E-58 | -1.69E-46 |
| MS.gene058041 | MS.gene38155 | -0.83717 | 6.09E-57 | -1.69E-46 |
| MS.gene058093 | MS.gene38155 | 0.842194 | 3.00E-58 | -1.69E-46 |
| MS.gene058099 | MS.gene38155 | 0.872033 | 4.34E-67 | -1.69E-46 |
| MS.gene058108 | MS.gene38155 | 0.863041 | 3.30E-64 | -1.69E-46 |
| MS.gene058109 | MS.gene38155 | 0.874345 | 7.26E-68 | -1.69E-46 |
| MS.gene058111 | MS.gene38155 | 0.835441 | 1.67E-56 | -1.69E-46 |
| MS.gene058117 | MS.gene38155 | 0.822094 | 2.85E-53 | -1.69E-46 |
| MS.gene058157 | MS.gene38155 | -0.821238 | 4.49E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene38155 | 0.925376 | 1.99E-90 | -1.69E-46 |
| MS.gene058173 | MS.gene38155 | 0.920611 | 1.03E-87 | -1.69E-46 |
| MS.gene058175 | MS.gene38155 | 0.927142 | 1.77E-91 | -1.69E-46 |
| MS.gene058179 | MS.gene38155 | 0.824902 | 6.28E-54 | -1.69E-46 |
| MS.gene058180 | MS.gene38155 | 0.809583 | 1.76E-50 | -1.69E-46 |
| MS.gene058493 | MS.gene38155 | 0.830837 | 2.35E-55 | -1.69E-46 |
| MS.gene058494 | MS.gene38155 | 0.81126 | 7.65E-51 | -1.69E-46 |
| MS.gene058840 | MS.gene38155 | 0.837641 | 4.61E-57 | -1.69E-46 |
| MS.gene05884 | MS.gene38155 | 0.81461 | 1.41E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene38155 | -0.81079 | 9.68E-51 | -1.69E-46 |
| MS.gene059037 | MS.gene38155 | 0.836745 | 7.82E-57 | -1.69E-46 |
| MS.gene059038 | MS.gene38155 | 0.824254 | 8.92E-54 | -1.69E-46 |
| MS.gene059044 | MS.gene38155 | 0.81742 | 3.33E-52 | -1.69E-46 |
| MS.gene059045 | MS.gene38155 | 0.878222 | 3.34E-69 | -1.69E-46 |
| MS.gene059223 | MS.gene38155 | 0.821017 | 5.05E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene38155 | -0.822426 | 2.38E-53 | -1.69E-46 |
| MS.gene059916 | MS.gene38155 | 0.806243 | 9.04E-50 | -1.69E-46 |
| MS.gene059943 | MS.gene38155 | 0.825619 | 4.25E-54 | -1.69E-46 |
| MS.gene060187 | MS.gene38155 | 0.801823 | 7.51E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene38155 | -0.809968 | 1.46E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene38155 | 0.823716 | 1.19E-53 | -1.69E-46 |
| MS.gene060778 | MS.gene38155 | -0.809703 | 1.66E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38155.t1 | MTR_5g098170 | 97.808 | 365 | 8 | 0 | 1 | 365 | 1 | 365 | 0.0 | 748 |
| MS.gene38155.t1 | MTR_3g092900 | 67.330 | 352 | 114 | 1 | 12 | 363 | 13 | 363 | 0.0 | 517 |
| MS.gene38155.t1 | MTR_7g118320 | 52.235 | 358 | 166 | 3 | 9 | 363 | 7 | 362 | 3.24e-136 | 392 |
| MS.gene38155.t1 | MTR_0591s0010 | 51.111 | 360 | 173 | 2 | 6 | 363 | 19 | 377 | 4.95e-134 | 387 |
| MS.gene38155.t1 | MTR_8g068750 | 49.722 | 360 | 178 | 2 | 6 | 363 | 19 | 377 | 2.06e-132 | 383 |
| MS.gene38155.t1 | MTR_8g068690 | 50.556 | 360 | 175 | 2 | 6 | 363 | 18 | 376 | 2.85e-130 | 378 |
| MS.gene38155.t1 | MTR_7g118300 | 47.911 | 359 | 183 | 3 | 5 | 363 | 21 | 375 | 4.91e-123 | 359 |
| MS.gene38155.t1 | MTR_8g068870 | 49.575 | 353 | 175 | 2 | 13 | 363 | 12 | 363 | 1.52e-121 | 355 |
| MS.gene38155.t1 | MTR_6g078850 | 47.814 | 366 | 186 | 2 | 2 | 362 | 17 | 382 | 2.69e-120 | 357 |
| MS.gene38155.t1 | MTR_8g068570 | 48.476 | 328 | 139 | 3 | 6 | 331 | 19 | 318 | 1.60e-107 | 318 |
| MS.gene38155.t1 | MTR_8g068730 | 44.444 | 360 | 165 | 3 | 6 | 363 | 19 | 345 | 5.01e-107 | 318 |
| MS.gene38155.t1 | MTR_1g096310 | 44.915 | 354 | 190 | 5 | 14 | 363 | 20 | 372 | 8.07e-103 | 308 |
| MS.gene38155.t1 | MTR_7g011900 | 42.416 | 356 | 197 | 7 | 12 | 363 | 19 | 370 | 2.33e-99 | 299 |
| MS.gene38155.t1 | MTR_8g024160 | 41.714 | 350 | 162 | 1 | 14 | 363 | 21 | 328 | 4.69e-98 | 294 |
| MS.gene38155.t1 | MTR_7g012020 | 43.417 | 357 | 192 | 8 | 12 | 363 | 18 | 369 | 5.00e-96 | 290 |
| MS.gene38155.t1 | MTR_7g012090 | 43.333 | 360 | 193 | 7 | 12 | 363 | 19 | 375 | 7.38e-95 | 288 |
| MS.gene38155.t1 | MTR_7g012070 | 42.577 | 357 | 195 | 6 | 15 | 363 | 21 | 375 | 2.10e-93 | 284 |
| MS.gene38155.t1 | MTR_3g021440 | 45.098 | 357 | 184 | 9 | 13 | 363 | 20 | 370 | 2.96e-93 | 283 |
| MS.gene38155.t1 | MTR_3g021430 | 43.978 | 357 | 184 | 8 | 15 | 363 | 9 | 357 | 5.65e-93 | 282 |
| MS.gene38155.t1 | MTR_7g012040 | 42.978 | 356 | 194 | 8 | 12 | 363 | 18 | 368 | 3.63e-92 | 280 |
| MS.gene38155.t1 | MTR_7g011990 | 40.782 | 358 | 197 | 8 | 12 | 363 | 19 | 367 | 5.45e-91 | 277 |
| MS.gene38155.t1 | MTR_2g055940 | 41.477 | 352 | 200 | 6 | 15 | 363 | 15 | 363 | 9.85e-91 | 276 |
| MS.gene38155.t1 | MTR_1g036490 | 39.227 | 362 | 208 | 7 | 9 | 363 | 14 | 370 | 3.78e-89 | 273 |
| MS.gene38155.t1 | MTR_1g036460 | 39.071 | 366 | 211 | 7 | 5 | 363 | 10 | 370 | 5.58e-89 | 272 |
| MS.gene38155.t1 | MTR_8g068690 | 50.000 | 262 | 128 | 2 | 6 | 265 | 18 | 278 | 6.96e-88 | 267 |
| MS.gene38155.t1 | MTR_1g036510 | 39.394 | 363 | 206 | 8 | 9 | 363 | 28 | 384 | 2.96e-85 | 263 |
| MS.gene38155.t1 | MTR_8g068740 | 44.404 | 277 | 117 | 4 | 6 | 279 | 19 | 261 | 3.06e-75 | 234 |
| MS.gene38155.t1 | MTR_8g068600 | 49.345 | 229 | 113 | 2 | 40 | 266 | 27 | 254 | 4.96e-74 | 231 |
| MS.gene38155.t1 | MTR_2g072790 | 35.754 | 358 | 221 | 6 | 9 | 363 | 3 | 354 | 7.58e-70 | 223 |
| MS.gene38155.t1 | MTR_7g012020 | 45.736 | 258 | 132 | 6 | 12 | 265 | 18 | 271 | 4.68e-68 | 216 |
| MS.gene38155.t1 | MTR_3g096050 | 35.143 | 350 | 219 | 5 | 17 | 363 | 14 | 358 | 4.23e-66 | 213 |
| MS.gene38155.t1 | MTR_0079s0070 | 38.532 | 327 | 173 | 11 | 35 | 349 | 10 | 320 | 4.90e-66 | 212 |
| MS.gene38155.t1 | MTR_4g038440 | 38.532 | 327 | 173 | 11 | 35 | 349 | 44 | 354 | 8.80e-66 | 213 |
| MS.gene38155.t1 | MTR_0017s0100 | 36.250 | 320 | 190 | 8 | 35 | 349 | 44 | 354 | 2.43e-64 | 209 |
| MS.gene38155.t1 | MTR_3g083620 | 36.449 | 321 | 187 | 9 | 34 | 349 | 39 | 347 | 1.62e-61 | 201 |
| MS.gene38155.t1 | MTR_3g096070 | 34.844 | 353 | 199 | 7 | 14 | 363 | 11 | 335 | 9.95e-60 | 196 |
| MS.gene38155.t1 | MTR_1g050220 | 34.848 | 330 | 161 | 8 | 22 | 347 | 8 | 287 | 1.54e-59 | 194 |
| MS.gene38155.t1 | MTR_7g012020 | 44.351 | 239 | 125 | 6 | 12 | 246 | 18 | 252 | 1.99e-58 | 190 |
| MS.gene38155.t1 | MTR_1g036510 | 37.023 | 262 | 156 | 5 | 9 | 265 | 28 | 285 | 5.05e-52 | 175 |
| MS.gene38155.t1 | MTR_1g076940 | 33.811 | 349 | 213 | 10 | 9 | 349 | 9 | 347 | 2.35e-49 | 170 |
| MS.gene38155.t1 | MTR_5g074600 | 31.790 | 324 | 207 | 8 | 33 | 350 | 31 | 346 | 2.23e-47 | 164 |
| MS.gene38155.t1 | MTR_5g074680 | 30.769 | 325 | 209 | 10 | 33 | 350 | 32 | 347 | 8.76e-46 | 160 |
| MS.gene38155.t1 | MTR_5g074580 | 30.061 | 326 | 210 | 8 | 33 | 350 | 32 | 347 | 5.28e-44 | 155 |
| MS.gene38155.t1 | MTR_4g079160 | 31.595 | 326 | 202 | 10 | 33 | 350 | 30 | 342 | 4.18e-43 | 153 |
| MS.gene38155.t1 | MTR_3g096050 | 35.857 | 251 | 154 | 4 | 17 | 265 | 14 | 259 | 4.32e-43 | 150 |
| MS.gene38155.t1 | MTR_7g014510 | 31.804 | 327 | 201 | 8 | 33 | 350 | 31 | 344 | 1.27e-42 | 152 |
| MS.gene38155.t1 | MTR_4g088200 | 33.333 | 330 | 200 | 10 | 31 | 350 | 29 | 348 | 3.78e-42 | 150 |
| MS.gene38155.t1 | MTR_8g068620 | 60.185 | 108 | 43 | 0 | 158 | 265 | 3 | 110 | 4.60e-42 | 143 |
| MS.gene38155.t1 | MTR_1g036510 | 34.855 | 241 | 148 | 5 | 9 | 244 | 28 | 264 | 6.60e-42 | 147 |
| MS.gene38155.t1 | MTR_7g024500 | 30.841 | 321 | 206 | 7 | 32 | 349 | 29 | 336 | 1.41e-41 | 149 |
| MS.gene38155.t1 | MTR_4g038440 | 37.759 | 241 | 126 | 8 | 35 | 265 | 44 | 270 | 4.72e-41 | 145 |
| MS.gene38155.t1 | MTR_4g088345 | 31.790 | 324 | 204 | 8 | 32 | 349 | 30 | 342 | 5.58e-41 | 147 |
| MS.gene38155.t1 | MTR_5g074540 | 31.098 | 328 | 186 | 11 | 33 | 350 | 31 | 328 | 1.68e-40 | 146 |
| MS.gene38155.t1 | MTR_7g024520 | 31.988 | 322 | 201 | 8 | 32 | 349 | 29 | 336 | 2.13e-40 | 146 |
| MS.gene38155.t1 | MTR_7g014570 | 31.804 | 327 | 196 | 8 | 33 | 350 | 31 | 339 | 5.51e-40 | 145 |
| MS.gene38155.t1 | MTR_4g088340 | 30.247 | 324 | 209 | 8 | 32 | 349 | 7 | 319 | 7.26e-39 | 141 |
| MS.gene38155.t1 | MTR_4g033150 | 32.432 | 333 | 206 | 12 | 33 | 354 | 31 | 355 | 5.22e-38 | 140 |
| MS.gene38155.t1 | MTR_5g074610 | 41.026 | 156 | 88 | 2 | 198 | 350 | 159 | 313 | 2.77e-36 | 134 |
| MS.gene38155.t1 | MTR_4g033015 | 32.738 | 336 | 201 | 14 | 33 | 354 | 31 | 355 | 1.84e-35 | 133 |
| MS.gene38155.t1 | MTR_4g033200 | 32.738 | 336 | 201 | 14 | 33 | 354 | 31 | 355 | 2.26e-35 | 133 |
| MS.gene38155.t1 | MTR_4g033170 | 34.221 | 263 | 155 | 9 | 31 | 287 | 29 | 279 | 4.32e-35 | 132 |
| MS.gene38155.t1 | MTR_8g068760 | 52.525 | 99 | 47 | 0 | 265 | 363 | 135 | 233 | 3.57e-34 | 126 |
| MS.gene38155.t1 | MTR_8g068760 | 42.400 | 125 | 69 | 2 | 18 | 140 | 18 | 141 | 7.78e-24 | 98.6 |
| MS.gene38155.t1 | MTR_4g088190 | 33.133 | 332 | 203 | 10 | 30 | 350 | 28 | 351 | 1.96e-33 | 127 |
| MS.gene38155.t1 | MTR_4g033085 | 34.766 | 256 | 149 | 9 | 33 | 282 | 31 | 274 | 4.08e-33 | 126 |
| MS.gene38155.t1 | MTR_1g076930 | 33.058 | 242 | 151 | 6 | 28 | 265 | 3 | 237 | 1.19e-29 | 114 |
| MS.gene38155.t1 | MTR_8g068580 | 53.846 | 91 | 42 | 0 | 273 | 363 | 43 | 133 | 5.01e-29 | 109 |
| MS.gene38155.t1 | MTR_8g068590 | 47.368 | 114 | 57 | 2 | 13 | 124 | 5 | 117 | 2.88e-25 | 100 |
| MS.gene38155.t1 | MTR_0794s0020 | 31.858 | 226 | 140 | 9 | 33 | 251 | 31 | 249 | 3.30e-18 | 83.6 |
| MS.gene38155.t1 | MTR_6g060280 | 47.619 | 63 | 27 | 2 | 217 | 274 | 1 | 62 | 4.04e-12 | 61.6 |
| MS.gene38155.t1 | MTR_6g060290 | 32.704 | 159 | 86 | 7 | 22 | 177 | 30 | 170 | 1.65e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38155.t1 | AT5G54160 | 62.216 | 352 | 130 | 2 | 12 | 363 | 13 | 361 | 3.87e-169 | 476 |
| MS.gene38155.t1 | AT1G77520 | 46.006 | 363 | 189 | 4 | 8 | 363 | 19 | 381 | 1.79e-113 | 335 |
| MS.gene38155.t1 | AT1G33030 | 45.014 | 351 | 178 | 5 | 21 | 364 | 9 | 351 | 1.18e-108 | 322 |
| MS.gene38155.t1 | AT1G51990 | 44.350 | 354 | 193 | 4 | 14 | 364 | 11 | 363 | 1.40e-105 | 315 |
| MS.gene38155.t1 | AT1G51990 | 43.785 | 354 | 195 | 4 | 14 | 364 | 11 | 363 | 1.78e-104 | 312 |
| MS.gene38155.t1 | AT1G77530 | 46.556 | 363 | 187 | 5 | 8 | 363 | 19 | 381 | 9.47e-99 | 298 |
| MS.gene38155.t1 | AT1G63140 | 46.027 | 365 | 187 | 6 | 7 | 363 | 39 | 401 | 2.58e-95 | 290 |
| MS.gene38155.t1 | AT1G63140 | 46.027 | 365 | 187 | 6 | 7 | 363 | 19 | 381 | 3.22e-95 | 289 |
| MS.gene38155.t1 | AT5G53810 | 44.868 | 341 | 180 | 6 | 31 | 363 | 38 | 378 | 9.14e-93 | 282 |
| MS.gene38155.t1 | AT1G21130 | 44.101 | 356 | 188 | 9 | 15 | 363 | 22 | 373 | 1.44e-92 | 282 |
| MS.gene38155.t1 | AT1G21100 | 43.539 | 356 | 190 | 8 | 15 | 363 | 22 | 373 | 1.27e-91 | 279 |
| MS.gene38155.t1 | AT1G21110 | 42.978 | 356 | 192 | 8 | 15 | 363 | 22 | 373 | 1.72e-90 | 276 |
| MS.gene38155.t1 | AT1G21120 | 43.417 | 357 | 189 | 9 | 15 | 363 | 22 | 373 | 5.67e-90 | 275 |
| MS.gene38155.t1 | AT1G21120 | 43.258 | 356 | 191 | 8 | 15 | 363 | 70 | 421 | 4.71e-89 | 274 |
| MS.gene38155.t1 | AT1G76790 | 42.391 | 368 | 191 | 9 | 12 | 365 | 7 | 367 | 1.79e-88 | 271 |
| MS.gene38155.t1 | AT5G37170 | 40.952 | 315 | 149 | 7 | 56 | 363 | 50 | 334 | 2.99e-74 | 233 |
| MS.gene38155.t1 | AT3G53140 | 36.141 | 368 | 217 | 8 | 5 | 363 | 1 | 359 | 1.99e-73 | 232 |
| MS.gene38155.t1 | AT1G33030 | 45.098 | 255 | 125 | 5 | 21 | 268 | 9 | 255 | 5.66e-72 | 226 |
| MS.gene38155.t1 | AT1G33030 | 45.238 | 252 | 123 | 5 | 21 | 265 | 9 | 252 | 4.83e-71 | 223 |
| MS.gene38155.t1 | AT5G37170 | 49.510 | 204 | 101 | 2 | 162 | 363 | 31 | 234 | 2.16e-65 | 207 |
| MS.gene38155.t1 | AT1G62900 | 52.195 | 205 | 97 | 1 | 160 | 363 | 1 | 205 | 2.72e-63 | 201 |
| MS.gene38155.t1 | AT5G37170 | 51.613 | 186 | 88 | 2 | 180 | 363 | 1 | 186 | 9.26e-62 | 196 |
| MS.gene38155.t1 | AT1G63140 | 44.361 | 266 | 139 | 5 | 7 | 265 | 39 | 302 | 6.46e-59 | 193 |
| MS.gene38155.t1 | AT1G21130 | 44.747 | 257 | 132 | 8 | 15 | 265 | 22 | 274 | 8.68e-58 | 190 |
| MS.gene38155.t1 | AT1G77530 | 42.857 | 245 | 134 | 4 | 8 | 246 | 19 | 263 | 3.78e-49 | 167 |
| MS.gene38155.t1 | AT1G63140 | 41.296 | 247 | 136 | 5 | 7 | 246 | 39 | 283 | 6.93e-46 | 159 |
| MS.gene38155.t1 | AT4G35150 | 37.313 | 201 | 117 | 3 | 158 | 349 | 110 | 310 | 1.17e-43 | 154 |
| MS.gene38155.t1 | AT4G35160 | 31.608 | 367 | 217 | 12 | 4 | 349 | 14 | 367 | 2.86e-42 | 152 |
Find 68 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCCTTGTTGAAAATCTTAT+TGG | 0.117287 | 5.3:-79406503 | None:intergenic |
| GATTCTATTGAAAGGCTTTA+TGG | 0.196470 | 5.3:+79404087 | MS.gene38155:CDS |
| TAATTAATGGCTTTAATATT+AGG | 0.206856 | 5.3:-79406655 | None:intergenic |
| ATAGCATATGATTGAGAAAA+TGG | 0.253902 | 5.3:+79403783 | None:intergenic |
| ATTCCATAAGCATTGTAAAA+TGG | 0.318888 | 5.3:-79406445 | None:intergenic |
| CTAAAATCAGCTTTGGAACT+TGG | 0.326655 | 5.3:+79403892 | MS.gene38155:CDS |
| AGAGAAAGAGTTTGAGGCTT+TGG | 0.327658 | 5.3:+79407277 | MS.gene38155:CDS |
| AAAGTTCTTGAGACATATTC+AGG | 0.350312 | 5.3:+79406556 | MS.gene38155:CDS |
| ATGGGGCAAGTCATAATTAA+TGG | 0.351565 | 5.3:-79406668 | None:intergenic |
| GAAGATGAAAGATGAGCATT+AGG | 0.382709 | 5.3:-79403943 | None:intergenic |
| AATGGTTCTAAAATCAGCTT+TGG | 0.388431 | 5.3:+79403885 | MS.gene38155:CDS |
| AAGTTTGAGTCAGGAACTAT+TGG | 0.393313 | 5.3:-79407185 | None:intergenic |
| GTTGATGTTGGTGGTGGAAC+TGG | 0.407689 | 5.3:+79406601 | MS.gene38155:CDS |
| CTTGGATCTATTGTTGATGT+TGG | 0.408159 | 5.3:+79406589 | MS.gene38155:CDS |
| GATGTTGAATGGAGCAAGTA+AGG | 0.417684 | 5.3:-79404056 | None:intergenic |
| GAGTTTGAGGCTTTGGCTAA+AGG | 0.425332 | 5.3:+79407284 | MS.gene38155:CDS |
| GAGAACAGAGAAAGAGTTTG+AGG | 0.430797 | 5.3:+79407271 | MS.gene38155:CDS |
| TTTGAGGCCAAGTTTGAGTC+AGG | 0.432989 | 5.3:-79407194 | None:intergenic |
| TATCATACCACATGTCTTTG+AGG | 0.434430 | 5.3:-79404194 | None:intergenic |
| AACATGCAATTTGAAATCCT+TGG | 0.437487 | 5.3:-79407316 | None:intergenic |
| AACAATCGGTCCAACATAGA+AGG | 0.438769 | 5.3:-79404009 | None:intergenic |
| AGGTGCTTCTGCTGCTCCAA+TGG | 0.449418 | 5.3:+79403867 | MS.gene38155:CDS |
| CATGAGAAATGAAGAAATCA+TGG | 0.451767 | 5.3:-79404157 | None:intergenic |
| ATCTCCATCTTGATGTTGAA+TGG | 0.454950 | 5.3:-79404067 | None:intergenic |
| CCACTTGACAGAATCAATTC+AGG | 0.458372 | 5.3:+79406411 | MS.gene38155:CDS |
| TGGACCTTTGATCTGTGCTA+TGG | 0.459850 | 5.3:-79406483 | None:intergenic |
| GCAATCACTTTCCCTGTGGC+TGG | 0.466408 | 5.3:-79407146 | None:intergenic |
| GAGGCTTTGGCTAAAGGAGC+TGG | 0.467803 | 5.3:+79407290 | MS.gene38155:CDS |
| TCCAACATAGAAGGTGCATC+TGG | 0.468392 | 5.3:-79404000 | None:intergenic |
| GGATCTATTGTTGATGTTGG+TGG | 0.469175 | 5.3:+79406592 | MS.gene38155:CDS |
| ATGAGCATTAGGCCCAGCTT+TGG | 0.471340 | 5.3:-79403932 | None:intergenic |
| CTCAAAATCTGTGTTTCAAA+TGG | 0.473479 | 5.3:+79407211 | MS.gene38155:CDS |
| AATAGTTCCTGACTCAAACT+TGG | 0.485311 | 5.3:+79407187 | MS.gene38155:CDS |
| TGCAGTGGATATGTCATGAT+TGG | 0.488631 | 5.3:+79407075 | MS.gene38155:intron |
| ATTGAAATTATAGCCAAAGC+TGG | 0.491957 | 5.3:+79403919 | MS.gene38155:CDS |
| ATCATATTGTGTCATAGCTC+AGG | 0.493221 | 5.3:+79407239 | MS.gene38155:CDS |
| TATGATTCTCTTCCAGCCAC+AGG | 0.500505 | 5.3:+79407134 | MS.gene38155:CDS |
| GATTGAGAAAATGGAGAGGG+AGG | 0.515664 | 5.3:+79403792 | MS.gene38155:CDS |
| GCTAAAGGAGCTGGATTCCA+AGG | 0.516175 | 5.3:+79407299 | MS.gene38155:CDS |
| TCTATTGTTGATGTTGGTGG+TGG | 0.520573 | 5.3:+79406595 | MS.gene38155:CDS |
| TCCAGATGCACCTTCTATGT+TGG | 0.524280 | 5.3:+79403999 | MS.gene38155:CDS |
| TGACAAAATATTTAGCAAGA+GGG | 0.538272 | 5.3:-79404116 | None:intergenic |
| TGCTTTCAACATGTATGTCA+TGG | 0.549160 | 5.3:+79407340 | MS.gene38155:CDS |
| TTGACAAAATATTTAGCAAG+AGG | 0.550700 | 5.3:-79404117 | None:intergenic |
| TATGATTGAGAAAATGGAGA+GGG | 0.552370 | 5.3:+79403789 | None:intergenic |
| AATGAAGCACCATCTTATCC+AGG | 0.555315 | 5.3:+79406697 | MS.gene38155:CDS |
| TAGCTAAGAGACGCAACAAT+CGG | 0.562942 | 5.3:-79404023 | None:intergenic |
| CATAAGCATTGTAAAATGGA+AGG | 0.564270 | 5.3:-79406441 | None:intergenic |
| AAGATGGAGATTCTATTGAA+AGG | 0.574600 | 5.3:+79404079 | MS.gene38155:CDS |
| CACTGCAATCACTTTCCCTG+TGG | 0.579168 | 5.3:-79407150 | None:intergenic |
| TGCTCCATTCAACATCAAGA+TGG | 0.592118 | 5.3:+79404063 | MS.gene38155:CDS |
| AATTCCATAGCACAGATCAA+AGG | 0.594633 | 5.3:+79406479 | MS.gene38155:CDS |
| ATGGTGCTTCATTAATGACA+TGG | 0.597662 | 5.3:-79406687 | None:intergenic |
| TGGTGCTTCATTAATGACAT+GGG | 0.597930 | 5.3:-79406686 | None:intergenic |
| GTAGGTGTGGAACATGTTGG+TGG | 0.603445 | 5.3:+79406903 | MS.gene38155:intron |
| GGTGTAGGTGTGGAACATGT+TGG | 0.605628 | 5.3:+79406900 | MS.gene38155:intron |
| CCTGAATTGATTCTGTCAAG+TGG | 0.609141 | 5.3:-79406411 | None:intergenic |
| ATGATTCTCTTCCAGCCACA+GGG | 0.613898 | 5.3:+79407135 | MS.gene38155:CDS |
| AGAAGCACCTGATAGTTCCA+TGG | 0.614474 | 5.3:-79403854 | None:intergenic |
| TTGAAATTATAGCCAAAGCT+GGG | 0.615035 | 5.3:+79403920 | MS.gene38155:CDS |
| ATATGATTGAGAAAATGGAG+AGG | 0.644596 | 5.3:+79403788 | None:intergenic |
| ATATTGTGTCATAGCTCAGG+TGG | 0.647369 | 5.3:+79407242 | MS.gene38155:CDS |
| ACAGAATCAATTCAGGAGGG+TGG | 0.647643 | 5.3:+79406418 | MS.gene38155:CDS |
| CTTGACAGAATCAATTCAGG+AGG | 0.653639 | 5.3:+79406414 | MS.gene38155:CDS |
| ACAAAGTCCTCAAAGACATG+TGG | 0.674324 | 5.3:+79404187 | MS.gene38155:CDS |
| GGTGCTTCATTAATGACATG+GGG | 0.689174 | 5.3:-79406685 | None:intergenic |
| CACAGGGAAAGTGATTGCAG+TGG | 0.689469 | 5.3:+79407151 | MS.gene38155:CDS |
| TTGACAGAATCAATTCAGGA+GGG | 0.693408 | 5.3:+79406415 | MS.gene38155:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAAATTAATTTATAAAAAG+TGG | - | chr5.3:79404449-79404468 | None:intergenic | 10.0% |
| !!! | AGTAATATTTTTTTTATTGT+CGG | - | chr5.3:79404495-79404514 | None:intergenic | 10.0% |
| !!! | ATTTTTAAATGACTTTTTAT+GGG | + | chr5.3:79406097-79406116 | MS.gene38155:intron | 10.0% |
| !!! | TTTTTGAAATTAATTAGATA+GGG | - | chr5.3:79404559-79404578 | None:intergenic | 10.0% |
| !!! | TTTTTTGAAATTAATTAGAT+AGG | - | chr5.3:79404560-79404579 | None:intergenic | 10.0% |
| !! | AAAAATAATACATCAAATGT+TGG | + | chr5.3:79406837-79406856 | MS.gene38155:intron | 15.0% |
| !! | AAAAATATTACTATGAAACT+TGG | + | chr5.3:79404503-79404522 | MS.gene38155:intron | 15.0% |
| !! | AAAATAATACATCAAATGTT+GGG | + | chr5.3:79406838-79406857 | MS.gene38155:intron | 15.0% |
| !! | AATATTGTTAACATATTTGT+TGG | - | chr5.3:79406018-79406037 | None:intergenic | 15.0% |
| !! | GCATATAAACTTATTAATTA+TGG | - | chr5.3:79405238-79405257 | None:intergenic | 15.0% |
| !!! | AAATAATTTTATGACTAACA+AGG | + | chr5.3:79405473-79405492 | MS.gene38155:intron | 15.0% |
| !!! | AAATAATTTTTGCTATTCTA+TGG | - | chr5.3:79406133-79406152 | None:intergenic | 15.0% |
| !!! | ATACCTAATAATTTGATTTT+TGG | + | chr5.3:79405273-79405292 | MS.gene38155:intron | 15.0% |
| !!! | GATTTTTAAATGACTTTTTA+TGG | + | chr5.3:79406096-79406115 | MS.gene38155:intron | 15.0% |
| !!! | GTAATATTTTTTTTATTGTC+GGG | - | chr5.3:79404494-79404513 | None:intergenic | 15.0% |
| !!! | TAATTAATGGCTTTAATATT+AGG | - | chr5.3:79406658-79406677 | None:intergenic | 15.0% |
| !!! | TACATTATATATTAAGGTTT+TGG | + | chr5.3:79406733-79406752 | MS.gene38155:intron | 15.0% |
| !!! | TCATTTACTAATTTTCTTTA+AGG | - | chr5.3:79404956-79404975 | None:intergenic | 15.0% |
| !!! | TCGTATAAAAATGATTTTTA+AGG | + | chr5.3:79404416-79404435 | MS.gene38155:intron | 15.0% |
| !!! | TCTTTTTCAAAATTAAAGTT+AGG | - | chr5.3:79404594-79404613 | None:intergenic | 15.0% |
| !!! | TTTTTTAAGGATACATATTT+AGG | + | chr5.3:79406237-79406256 | MS.gene38155:intron | 15.0% |
| !! | AAATAATACATCAAATGTTG+GGG | + | chr5.3:79406839-79406858 | MS.gene38155:intron | 20.0% |
| !! | AACTTAAGATCATAATTTAG+TGG | + | chr5.3:79405670-79405689 | MS.gene38155:intron | 20.0% |
| !! | AATAGCAAAAATTATTTCAG+AGG | + | chr5.3:79406136-79406155 | MS.gene38155:intron | 20.0% |
| !! | ACACTTTATTATATAATTGC+AGG | + | chr5.3:79406386-79406405 | MS.gene38155:intron | 20.0% |
| !! | ACTTAAGATCATAATTTAGT+GGG | + | chr5.3:79405671-79405690 | MS.gene38155:intron | 20.0% |
| !! | CATCCAAAAATCAAATTATT+AGG | - | chr5.3:79405279-79405298 | None:intergenic | 20.0% |
| !! | TATCTAACCAAACAAAAATT+AGG | + | chr5.3:79406763-79406782 | MS.gene38155:intron | 20.0% |
| !! | TTCAAAATTAAAGTTAGGTT+GGG | - | chr5.3:79404589-79404608 | None:intergenic | 20.0% |
| !! | TTTCAAAATTAAAGTTAGGT+TGG | - | chr5.3:79404590-79404609 | None:intergenic | 20.0% |
| !!! | TATTTTGTCAATAATCAAGA+TGG | + | chr5.3:79404129-79404148 | MS.gene38155:CDS | 20.0% |
| !!! | TTTTTGATGTTTGTAGAAAA+TGG | - | chr5.3:79405096-79405115 | None:intergenic | 20.0% |
| ! | AAAAATCAACAACTTACTCA+CGG | - | chr5.3:79405409-79405428 | None:intergenic | 25.0% |
| ! | AAGCAAAGTCAAAAATAAGT+TGG | - | chr5.3:79405539-79405558 | None:intergenic | 25.0% |
| ! | ACATAAAAAATCAACGACAA+CGG | - | chr5.3:79405375-79405394 | None:intergenic | 25.0% |
| ! | ACTTATCATGAAAAGATTGT+TGG | + | chr5.3:79405971-79405990 | MS.gene38155:intron | 25.0% |
| ! | AGCAAAGTCAAAAATAAGTT+GGG | - | chr5.3:79405538-79405557 | None:intergenic | 25.0% |
| ! | ATGTAAAATAAAAACACACC+TGG | - | chr5.3:79406718-79406737 | None:intergenic | 25.0% |
| ! | CATTAGTTAAGGACTTTAAA+TGG | - | chr5.3:79405844-79405863 | None:intergenic | 25.0% |
| ! | GCATACATAAAACATAAACT+TGG | - | chr5.3:79407058-79407077 | None:intergenic | 25.0% |
| ! | GTCATAAAATTATTTGCACT+TGG | - | chr5.3:79405468-79405487 | None:intergenic | 25.0% |
| ! | TAATGTCACCTTCATAAAAA+TGG | - | chr5.3:79406961-79406980 | None:intergenic | 25.0% |
| ! | TCATAAAAGTTTGTGTGATA+AGG | - | chr5.3:79405814-79405833 | None:intergenic | 25.0% |
| ! | TCCTTAAGCAAATTAAAGTT+TGG | + | chr5.3:79405560-79405579 | MS.gene38155:intron | 25.0% |
| ! | TGACAAAATATTTAGCAAGA+GGG | - | chr5.3:79404119-79404138 | None:intergenic | 25.0% |
| ! | TGGAGAATAATAACTATGAA+AGG | + | chr5.3:79405186-79405205 | MS.gene38155:intron | 25.0% |
| ! | TTGACAAAATATTTAGCAAG+AGG | - | chr5.3:79404120-79404139 | None:intergenic | 25.0% |
| !! | ATTCCATAAGCATTGTAAAA+TGG | - | chr5.3:79406448-79406467 | None:intergenic | 25.0% |
| !! | CAAAGTTTTACTCTCTTTTT+TGG | - | chr5.3:79405592-79405611 | None:intergenic | 25.0% |
| !! | TCCAATAAGATTTTCAACAA+GGG | + | chr5.3:79406502-79406521 | MS.gene38155:CDS | 25.0% |
| !! | TTTATGTTTTATGTATGCAG+TGG | + | chr5.3:79407060-79407079 | MS.gene38155:intron | 25.0% |
| !!! | AACCTTGATTTTGATATGTT+TGG | + | chr5.3:79406162-79406181 | MS.gene38155:intron | 25.0% |
| !!! | ACACCAGTGAAATATTTTAA+AGG | + | chr5.3:79405695-79405714 | MS.gene38155:intron | 25.0% |
| !!! | ACCAAACTTTAATTTGCTTA+AGG | - | chr5.3:79405564-79405583 | None:intergenic | 25.0% |
| !!! | ACCTTGATTTTGATATGTTT+GGG | + | chr5.3:79406163-79406182 | MS.gene38155:intron | 25.0% |
| !!! | ACTAATTTTCTTTAAGGTGT+AGG | - | chr5.3:79404950-79404969 | None:intergenic | 25.0% |
| !!! | CACCAGTGAAATATTTTAAA+GGG | + | chr5.3:79405696-79405715 | MS.gene38155:intron | 25.0% |
| !!! | CATCTGGATTTTTTATAGAA+GGG | - | chr5.3:79403987-79404006 | None:intergenic | 25.0% |
| !!! | CTAATTTTCTTTAAGGTGTA+GGG | - | chr5.3:79404949-79404968 | None:intergenic | 25.0% |
| !!! | TAGTTCGAGCTTTTAAAATA+GGG | - | chr5.3:79405889-79405908 | None:intergenic | 25.0% |
| !!! | TATATATTAAGGTTTTGGAG+TGG | + | chr5.3:79406738-79406757 | MS.gene38155:intron | 25.0% |
| !!! | TTAGTTCGAGCTTTTAAAAT+AGG | - | chr5.3:79405890-79405909 | None:intergenic | 25.0% |
| !!! | TTTCCTCTTTTGTTTTGTTT+TGG | + | chr5.3:79404644-79404663 | MS.gene38155:intron | 25.0% |
| AAAGTTCTTGAGACATATTC+AGG | + | chr5.3:79406556-79406575 | MS.gene38155:CDS | 30.0% | |
| AAATAGAGATATCTCCATTG+TGG | - | chr5.3:79405127-79405146 | None:intergenic | 30.0% | |
| AAGATGGAGATTCTATTGAA+AGG | + | chr5.3:79404079-79404098 | MS.gene38155:CDS | 30.0% | |
| AATCATGTGTAGTACATTCA+TGG | - | chr5.3:79404705-79404724 | None:intergenic | 30.0% | |
| AATGTTTAAAGAATGCTCCA+AGG | - | chr5.3:79405738-79405757 | None:intergenic | 30.0% | |
| ACGTAGATGTAAATGATAGA+TGG | + | chr5.3:79404336-79404355 | MS.gene38155:intron | 30.0% | |
| AGTCCAAAACAAAACAAAAG+AGG | - | chr5.3:79404650-79404669 | None:intergenic | 30.0% | |
| ATGTACAGTATACAGTGTAA+TGG | + | chr5.3:79405933-79405952 | MS.gene38155:intron | 30.0% | |
| ATGTTTAAAGAATGCTCCAA+GGG | - | chr5.3:79405737-79405756 | None:intergenic | 30.0% | |
| ATTGAAATTATAGCCAAAGC+TGG | + | chr5.3:79403919-79403938 | MS.gene38155:CDS | 30.0% | |
| ATTTCATCTCATATCCAACA+CGG | + | chr5.3:79404302-79404321 | MS.gene38155:intron | 30.0% | |
| CATGAGAAATGAAGAAATCA+TGG | - | chr5.3:79404160-79404179 | None:intergenic | 30.0% | |
| CTCAAAATCTGTGTTTCAAA+TGG | + | chr5.3:79407211-79407230 | MS.gene38155:CDS | 30.0% | |
| CTGTATACTGTACATTCTTA+AGG | - | chr5.3:79405928-79405947 | None:intergenic | 30.0% | |
| GATTCTATTGAAAGGCTTTA+TGG | + | chr5.3:79404087-79404106 | MS.gene38155:CDS | 30.0% | |
| TAAAGTCCTTAACTAATGCA+CGG | + | chr5.3:79405846-79405865 | MS.gene38155:intron | 30.0% | |
| TTGAAATTATAGCCAAAGCT+GGG | + | chr5.3:79403920-79403939 | MS.gene38155:CDS | 30.0% | |
| TTTGTAGAAAATGGTGTCTA+TGG | - | chr5.3:79405087-79405106 | None:intergenic | 30.0% | |
| ! | AACATGCAATTTGAAATCCT+TGG | - | chr5.3:79407319-79407338 | None:intergenic | 30.0% |
| ! | ATAAAAATGGCATCAGCTTT+TGG | - | chr5.3:79406948-79406967 | None:intergenic | 30.0% |
| ! | CATAAGCATTGTAAAATGGA+AGG | - | chr5.3:79406444-79406463 | None:intergenic | 30.0% |
| ! | CTTCCATTTTACAATGCTTA+TGG | + | chr5.3:79406442-79406461 | MS.gene38155:CDS | 30.0% |
| ! | GCATTTGCCTAATTTTTGTT+TGG | - | chr5.3:79406773-79406792 | None:intergenic | 30.0% |
| ! | GTCCAATAAGATTTTCAACA+AGG | + | chr5.3:79406501-79406520 | MS.gene38155:CDS | 30.0% |
| ! | TGTTGGGGTAATATTCATTT+TGG | + | chr5.3:79406854-79406873 | MS.gene38155:intron | 30.0% |
| ! | TTTGTAGCTTTTGACATGTT+TGG | + | chr5.3:79406202-79406221 | MS.gene38155:intron | 30.0% |
| !! | AATGGTTCTAAAATCAGCTT+TGG | + | chr5.3:79403885-79403904 | MS.gene38155:CDS | 30.0% |
| !! | ATCTCTATTTAGTTTGACGT+CGG | + | chr5.3:79405137-79405156 | MS.gene38155:intron | 30.0% |
| !! | CATATTTTAAAAGCTCGAAC+TGG | + | chr5.3:79405625-79405644 | MS.gene38155:intron | 30.0% |
| !! | CATTTGAAACACAGATTTTG+AGG | - | chr5.3:79407213-79407232 | None:intergenic | 30.0% |
| !! | GACCCTTTAAAATATTTCAC+TGG | - | chr5.3:79405701-79405720 | None:intergenic | 30.0% |
| !!! | AAAGCTGATTTTAGAACCAT+TGG | - | chr5.3:79403886-79403905 | None:intergenic | 30.0% |
| !!! | CAGTTCGAGCTTTTAAAATA+TGG | - | chr5.3:79405627-79405646 | None:intergenic | 30.0% |
| !!! | CTTTTGTTTTGTTTTGGACT+TGG | + | chr5.3:79404650-79404669 | MS.gene38155:intron | 30.0% |
| !!! | GCATCTGGATTTTTTATAGA+AGG | - | chr5.3:79403988-79404007 | None:intergenic | 30.0% |
| !!! | GTAAAAGTTTTAGATGCTTG+TGG | + | chr5.3:79405166-79405185 | MS.gene38155:intron | 30.0% |
| AAAAACACACCTGGATAAGA+TGG | - | chr5.3:79406709-79406728 | None:intergenic | 35.0% | |
| AAGATATGAGACAGCAAGTT+AGG | - | chr5.3:79404624-79404643 | None:intergenic | 35.0% | |
| AAGTTTGAGTCAGGAACTAT+TGG | - | chr5.3:79407188-79407207 | None:intergenic | 35.0% | |
| AATAGTTCCTGACTCAAACT+TGG | + | chr5.3:79407187-79407206 | MS.gene38155:CDS | 35.0% | |
| AATTCCATAGCACAGATCAA+AGG | + | chr5.3:79406479-79406498 | MS.gene38155:CDS | 35.0% | |
| ACCCATAAAAAAGTGATGAG+AGG | + | chr5.3:79405051-79405070 | MS.gene38155:intron | 35.0% | |
| AGATATCTCCATTGTGGAAT+AGG | - | chr5.3:79405121-79405140 | None:intergenic | 35.0% | |
| ATCATATTGTGTCATAGCTC+AGG | + | chr5.3:79407239-79407258 | MS.gene38155:CDS | 35.0% | |
| ATCTCCATCTTGATGTTGAA+TGG | - | chr5.3:79404070-79404089 | None:intergenic | 35.0% | |
| ATGAAATGAAATCGTGACAG+AGG | - | chr5.3:79404756-79404775 | None:intergenic | 35.0% | |
| ATGGGGCAAGTCATAATTAA+TGG | - | chr5.3:79406671-79406690 | None:intergenic | 35.0% | |
| ATGGTGCTTCATTAATGACA+TGG | - | chr5.3:79406690-79406709 | None:intergenic | 35.0% | |
| CAAAAACTCCTATTCCACAA+TGG | + | chr5.3:79405110-79405129 | MS.gene38155:intron | 35.0% | |
| CAAGCATTAGTGATTAGTGA+AGG | + | chr5.3:79406063-79406082 | MS.gene38155:intron | 35.0% | |
| CCCATAAAAAAGTGATGAGA+GGG | + | chr5.3:79405052-79405071 | MS.gene38155:intron | 35.0% | |
| CTTGGATCTATTGTTGATGT+TGG | + | chr5.3:79406589-79406608 | MS.gene38155:CDS | 35.0% | |
| GAAGATGAAAGATGAGCATT+AGG | - | chr5.3:79403946-79403965 | None:intergenic | 35.0% | |
| GATACTCTTTGACTCTTCAT+AGG | - | chr5.3:79404817-79404836 | None:intergenic | 35.0% | |
| GCCCAAACATATCAAAATCA+AGG | - | chr5.3:79406167-79406186 | None:intergenic | 35.0% | |
| GCCCTTGTTGAAAATCTTAT+TGG | - | chr5.3:79406506-79406525 | None:intergenic | 35.0% | |
| TAGAAAATGGTGTCTATGGA+AGG | - | chr5.3:79405083-79405102 | None:intergenic | 35.0% | |
| TATCATACCACATGTCTTTG+AGG | - | chr5.3:79404197-79404216 | None:intergenic | 35.0% | |
| TGCTTTCAACATGTATGTCA+TGG | + | chr5.3:79407340-79407359 | MS.gene38155:CDS | 35.0% | |
| TGGTGCTTCATTAATGACAT+GGG | - | chr5.3:79406689-79406708 | None:intergenic | 35.0% | |
| TTGACAGAATCAATTCAGGA+GGG | + | chr5.3:79406415-79406434 | MS.gene38155:CDS | 35.0% | |
| TTGGGCTAAACATAAGTCTT+TGG | - | chr5.3:79405520-79405539 | None:intergenic | 35.0% | |
| TTTGGTCACTGAATGTGTAA+CGG | + | chr5.3:79406872-79406891 | MS.gene38155:intron | 35.0% | |
| ! | AAGCTCGAACTGGTTTATTT+AGG | + | chr5.3:79405635-79405654 | MS.gene38155:intron | 35.0% |
| !! | CTAAAATCAGCTTTGGAACT+TGG | + | chr5.3:79403892-79403911 | MS.gene38155:CDS | 35.0% |
| !! | GAGACATATTCAGGTTTTGA+GGG | + | chr5.3:79406565-79406584 | MS.gene38155:CDS | 35.0% |
| !! | TGAGACATATTCAGGTTTTG+AGG | + | chr5.3:79406564-79406583 | MS.gene38155:CDS | 35.0% |
| !!! | AGAAGCTTTGTTTTTTGCCA+TGG | + | chr5.3:79403837-79403856 | MS.gene38155:CDS | 35.0% |
| !!! | AGCTGATGCCATTTTTATGA+AGG | + | chr5.3:79406950-79406969 | MS.gene38155:CDS | 35.0% |
| !!! | CCCTCTCATCACTTTTTTAT+GGG | - | chr5.3:79405055-79405074 | None:intergenic | 35.0% |
| !!! | TCCCTCTCATCACTTTTTTA+TGG | - | chr5.3:79405056-79405075 | None:intergenic | 35.0% |
| !!! | TTTTTTGCCATGGAACTATC+AGG | + | chr5.3:79403847-79403866 | MS.gene38155:CDS | 35.0% |
| AACAATCGGTCCAACATAGA+AGG | - | chr5.3:79404012-79404031 | None:intergenic | 40.0% | |
| ACAAAGTCCTCAAAGACATG+TGG | + | chr5.3:79404187-79404206 | MS.gene38155:CDS | 40.0% | |
| AGGACTATTTCAACCGAGTT+TGG | - | chr5.3:79404797-79404816 | None:intergenic | 40.0% | |
| ATATTGTGTCATAGCTCAGG+TGG | + | chr5.3:79407242-79407261 | MS.gene38155:CDS | 40.0% | |
| CCACTTGACAGAATCAATTC+AGG | + | chr5.3:79406411-79406430 | MS.gene38155:CDS | 40.0% | |
| CTTGACAGAATCAATTCAGG+AGG | + | chr5.3:79406414-79406433 | MS.gene38155:CDS | 40.0% | |
| GAGAACAGAGAAAGAGTTTG+AGG | + | chr5.3:79407271-79407290 | MS.gene38155:CDS | 40.0% | |
| GATGTTGAATGGAGCAAGTA+AGG | - | chr5.3:79404059-79404078 | None:intergenic | 40.0% | |
| GGATCTATTGTTGATGTTGG+TGG | + | chr5.3:79406592-79406611 | MS.gene38155:CDS | 40.0% | |
| GGTGCTTCATTAATGACATG+GGG | - | chr5.3:79406688-79406707 | None:intergenic | 40.0% | |
| TAGCTAAGAGACGCAACAAT+CGG | - | chr5.3:79404026-79404045 | None:intergenic | 40.0% | |
| TGCAGTGGATATGTCATGAT+TGG | + | chr5.3:79407075-79407094 | MS.gene38155:intron | 40.0% | |
| TGCTCCATTCAACATCAAGA+TGG | + | chr5.3:79404063-79404082 | MS.gene38155:CDS | 40.0% | |
| ! | AATGAAGCACCATCTTATCC+AGG | + | chr5.3:79406697-79406716 | MS.gene38155:CDS | 40.0% |
| ! | AGAGAAAGAGTTTGAGGCTT+TGG | + | chr5.3:79407277-79407296 | MS.gene38155:CDS | 40.0% |
| ! | CCTGAATTGATTCTGTCAAG+TGG | - | chr5.3:79406414-79406433 | None:intergenic | 40.0% |
| ! | TCTATTGTTGATGTTGGTGG+TGG | + | chr5.3:79406595-79406614 | MS.gene38155:CDS | 40.0% |
| ! | TTTTATTGTCGGGTCATGTC+TGG | - | chr5.3:79404484-79404503 | None:intergenic | 40.0% |
| !! | TATTTAGTTTGACGTCGGTG+TGG | + | chr5.3:79405142-79405161 | MS.gene38155:intron | 40.0% |
| !!! | TATTCAGGTTTTGAGGGTCT+TGG | + | chr5.3:79406571-79406590 | MS.gene38155:CDS | 40.0% |
| ACAACTTACTCACGGCAACT+CGG | - | chr5.3:79405401-79405420 | None:intergenic | 45.0% | |
| ACAGAATCAATTCAGGAGGG+TGG | + | chr5.3:79406418-79406437 | MS.gene38155:CDS | 45.0% | |
| ACTGAATGTGTAACGGTGTC+TGG | + | chr5.3:79406879-79406898 | MS.gene38155:intron | 45.0% | |
| AGTGCTCCGTGCATTAGTTA+AGG | - | chr5.3:79405855-79405874 | None:intergenic | 45.0% | |
| ATGATTCTCTTCCAGCCACA+GGG | + | chr5.3:79407135-79407154 | MS.gene38155:CDS | 45.0% | |
| CGTACTAAACTCATCCGTGT+TGG | - | chr5.3:79404319-79404338 | None:intergenic | 45.0% | |
| GATTGAGAAAATGGAGAGGG+AGG | + | chr5.3:79403792-79403811 | MS.gene38155:CDS | 45.0% | |
| TATGATTCTCTTCCAGCCAC+AGG | + | chr5.3:79407134-79407153 | MS.gene38155:CDS | 45.0% | |
| TCCAGATGCACCTTCTATGT+TGG | + | chr5.3:79403999-79404018 | MS.gene38155:CDS | 45.0% | |
| TGGACCTTTGATCTGTGCTA+TGG | - | chr5.3:79406486-79406505 | None:intergenic | 45.0% | |
| ! | AGTTTGGCTCAAACAGCACA+AGG | - | chr5.3:79404781-79404800 | None:intergenic | 45.0% |
| ! | GAGTTTGAGGCTTTGGCTAA+AGG | + | chr5.3:79407284-79407303 | MS.gene38155:CDS | 45.0% |
| ! | TCCAACATAGAAGGTGCATC+TGG | - | chr5.3:79404003-79404022 | None:intergenic | 45.0% |
| ! | TTTGAGGCCAAGTTTGAGTC+AGG | - | chr5.3:79407197-79407216 | None:intergenic | 45.0% |
| !! | AGAAGCACCTGATAGTTCCA+TGG | - | chr5.3:79403857-79403876 | None:intergenic | 45.0% |
| !! | TGTGCTGTTTGAGCCAAACT+CGG | + | chr5.3:79404781-79404800 | MS.gene38155:intron | 45.0% |
| !! | AAAATAAATGAAAAATATAT+TGG | - | chr5.3:79407022-79407041 | None:intergenic | 5.0% |
| !!! | GTTAATTTTTAATTTTTTTA+AGG | + | chr5.3:79406224-79406243 | MS.gene38155:intron | 5.0% |
| !!! | TTATTTTACATTATATATTA+AGG | + | chr5.3:79406727-79406746 | MS.gene38155:intron | 5.0% |
| ATGAGCATTAGGCCCAGCTT+TGG | - | chr5.3:79403935-79403954 | None:intergenic | 50.0% | |
| CACAGGGAAAGTGATTGCAG+TGG | + | chr5.3:79407151-79407170 | MS.gene38155:CDS | 50.0% | |
| CACTGCAATCACTTTCCCTG+TGG | - | chr5.3:79407153-79407172 | None:intergenic | 50.0% | |
| GCTAAAGGAGCTGGATTCCA+AGG | + | chr5.3:79407299-79407318 | MS.gene38155:CDS | 50.0% | |
| GGTGTAGGTGTGGAACATGT+TGG | + | chr5.3:79406900-79406919 | MS.gene38155:intron | 50.0% | |
| GTAGGTGTGGAACATGTTGG+TGG | + | chr5.3:79406903-79406922 | MS.gene38155:intron | 50.0% | |
| GTCTAGTTAACGAGTGCCCT+TGG | + | chr5.3:79405718-79405737 | MS.gene38155:intron | 50.0% | |
| TGTGTAACGGTGTCTGGTGT+AGG | + | chr5.3:79406885-79406904 | MS.gene38155:intron | 50.0% | |
| !! | GTTGATGTTGGTGGTGGAAC+TGG | + | chr5.3:79406601-79406620 | MS.gene38155:CDS | 50.0% |
| AACGGTGTCTGGTGTAGGTG+TGG | + | chr5.3:79406890-79406909 | MS.gene38155:intron | 55.0% | |
| AGGTGCTTCTGCTGCTCCAA+TGG | + | chr5.3:79403867-79403886 | MS.gene38155:CDS | 55.0% | |
| GCAATCACTTTCCCTGTGGC+TGG | - | chr5.3:79407149-79407168 | None:intergenic | 55.0% | |
| ! | GAGGCTTTGGCTAAAGGAGC+TGG | + | chr5.3:79407290-79407309 | MS.gene38155:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 79403790 | 79407382 | 79403790 | ID=MS.gene38155 |
| chr5.3 | mRNA | 79403790 | 79407382 | 79403790 | ID=MS.gene38155.t1;Parent=MS.gene38155 |
| chr5.3 | exon | 79403790 | 79404208 | 79403790 | ID=MS.gene38155.t1.exon1;Parent=MS.gene38155.t1 |
| chr5.3 | CDS | 79403790 | 79404208 | 79403790 | ID=cds.MS.gene38155.t1;Parent=MS.gene38155.t1 |
| chr5.3 | exon | 79406408 | 79406718 | 79406408 | ID=MS.gene38155.t1.exon2;Parent=MS.gene38155.t1 |
| chr5.3 | CDS | 79406408 | 79406718 | 79406408 | ID=cds.MS.gene38155.t1;Parent=MS.gene38155.t1 |
| chr5.3 | exon | 79406907 | 79406971 | 79406907 | ID=MS.gene38155.t1.exon3;Parent=MS.gene38155.t1 |
| chr5.3 | CDS | 79406907 | 79406971 | 79406907 | ID=cds.MS.gene38155.t1;Parent=MS.gene38155.t1 |
| chr5.3 | exon | 79407080 | 79407382 | 79407080 | ID=MS.gene38155.t1.exon4;Parent=MS.gene38155.t1 |
| chr5.3 | CDS | 79407080 | 79407382 | 79407080 | ID=cds.MS.gene38155.t1;Parent=MS.gene38155.t1 |
| Gene Sequence |
| Protein sequence |
