Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68457.t1 | XP_003591666.2 | 94.8 | 324 | 5 | 2 | 1 | 324 | 1 | 312 | 8.30E-170 | 606.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68457.t1 | Q5ZID6 | 39.0 | 277 | 149 | 5 | 53 | 324 | 54 | 315 | 8.5e-46 | 185.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68457.t1 | A0A396K4N3 | 94.8 | 324 | 5 | 2 | 1 | 324 | 1 | 312 | 6.0e-170 | 606.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene68457 | 0.820955 | 5.22E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene68457 | 0.870257 | 1.67E-66 | -1.69E-46 |
| MS.gene049222 | MS.gene68457 | 0.863993 | 1.67E-64 | -1.69E-46 |
| MS.gene049232 | MS.gene68457 | 0.9168 | 1.15E-85 | -1.69E-46 |
| MS.gene049285 | MS.gene68457 | 0.846846 | 1.68E-59 | -1.69E-46 |
| MS.gene049320 | MS.gene68457 | 0.851322 | 9.57E-61 | -1.69E-46 |
| MS.gene049396 | MS.gene68457 | 0.845293 | 4.44E-59 | -1.69E-46 |
| MS.gene049609 | MS.gene68457 | 0.821279 | 4.39E-53 | -1.69E-46 |
| MS.gene049611 | MS.gene68457 | -0.802969 | 4.36E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene68457 | 0.816586 | 5.12E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene68457 | 0.806213 | 9.18E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene68457 | 0.87115 | 8.51E-67 | -1.69E-46 |
| MS.gene050163 | MS.gene68457 | 0.820418 | 6.93E-53 | -1.69E-46 |
| MS.gene050165 | MS.gene68457 | 0.819165 | 1.34E-52 | -1.69E-46 |
| MS.gene050170 | MS.gene68457 | 0.807848 | 4.14E-50 | -1.69E-46 |
| MS.gene050216 | MS.gene68457 | 0.969445 | 3.92E-130 | -1.69E-46 |
| MS.gene050323 | MS.gene68457 | 0.865969 | 4.01E-65 | -1.69E-46 |
| MS.gene050333 | MS.gene68457 | 0.834057 | 3.73E-56 | -1.69E-46 |
| MS.gene050380 | MS.gene68457 | -0.853688 | 2.03E-61 | -1.69E-46 |
| MS.gene050381 | MS.gene68457 | -0.850233 | 1.94E-60 | -1.69E-46 |
| MS.gene050496 | MS.gene68457 | 0.842555 | 2.41E-58 | -1.69E-46 |
| MS.gene050499 | MS.gene68457 | 0.83383 | 4.26E-56 | -1.69E-46 |
| MS.gene050502 | MS.gene68457 | 0.829792 | 4.22E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene68457 | 0.870131 | 1.84E-66 | -1.69E-46 |
| MS.gene050518 | MS.gene68457 | 0.835475 | 1.64E-56 | -1.69E-46 |
| MS.gene050520 | MS.gene68457 | 0.807782 | 4.27E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene68457 | 0.813385 | 2.63E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene68457 | 0.860364 | 2.17E-63 | -1.69E-46 |
| MS.gene050662 | MS.gene68457 | 0.881965 | 1.55E-70 | -1.69E-46 |
| MS.gene050675 | MS.gene68457 | 0.84953 | 3.05E-60 | -1.69E-46 |
| MS.gene050686 | MS.gene68457 | 0.815638 | 8.34E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene68457 | 0.806881 | 6.63E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene68457 | 0.830488 | 2.85E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene68457 | 0.853436 | 2.39E-61 | -1.69E-46 |
| MS.gene05080 | MS.gene68457 | 0.846587 | 1.98E-59 | -1.69E-46 |
| MS.gene050868 | MS.gene68457 | 0.881003 | 3.44E-70 | -1.69E-46 |
| MS.gene050871 | MS.gene68457 | 0.884172 | 2.41E-71 | -1.69E-46 |
| MS.gene050950 | MS.gene68457 | 0.822059 | 2.90E-53 | -1.69E-46 |
| MS.gene050986 | MS.gene68457 | 0.836839 | 7.40E-57 | -1.69E-46 |
| MS.gene05104 | MS.gene68457 | -0.824684 | 7.06E-54 | -1.69E-46 |
| MS.gene051127 | MS.gene68457 | -0.804862 | 1.76E-49 | -1.69E-46 |
| MS.gene051268 | MS.gene68457 | 0.840214 | 9.95E-58 | -1.69E-46 |
| MS.gene05141 | MS.gene68457 | -0.806877 | 6.65E-50 | -1.69E-46 |
| MS.gene051509 | MS.gene68457 | 0.853603 | 2.14E-61 | -1.69E-46 |
| MS.gene051551 | MS.gene68457 | 0.837292 | 5.67E-57 | -1.69E-46 |
| MS.gene051694 | MS.gene68457 | 0.82713 | 1.85E-54 | -1.69E-46 |
| MS.gene051734 | MS.gene68457 | 0.801466 | 8.88E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene68457 | 0.807102 | 5.95E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene68457 | 0.845244 | 4.58E-59 | -1.69E-46 |
| MS.gene051874 | MS.gene68457 | 0.842852 | 2.01E-58 | -1.69E-46 |
| MS.gene052066 | MS.gene68457 | 0.82669 | 2.36E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene68457 | 0.848209 | 7.09E-60 | -1.69E-46 |
| MS.gene052482 | MS.gene68457 | 0.823791 | 1.15E-53 | -1.69E-46 |
| MS.gene052486 | MS.gene68457 | 0.826235 | 3.03E-54 | -1.69E-46 |
| MS.gene052504 | MS.gene68457 | 0.801133 | 1.04E-48 | -1.69E-46 |
| MS.gene052506 | MS.gene68457 | 0.827103 | 1.88E-54 | -1.69E-46 |
| MS.gene052822 | MS.gene68457 | 0.828193 | 1.03E-54 | -1.69E-46 |
| MS.gene052823 | MS.gene68457 | 0.800578 | 1.35E-48 | -1.69E-46 |
| MS.gene052916 | MS.gene68457 | 0.832661 | 8.32E-56 | -1.69E-46 |
| MS.gene052966 | MS.gene68457 | 0.84878 | 4.93E-60 | -1.69E-46 |
| MS.gene053018 | MS.gene68457 | 0.852493 | 4.45E-61 | -1.69E-46 |
| MS.gene053203 | MS.gene68457 | 0.835002 | 2.16E-56 | -1.69E-46 |
| MS.gene053207 | MS.gene68457 | 0.812673 | 3.77E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene68457 | 0.840845 | 6.80E-58 | -1.69E-46 |
| MS.gene053286 | MS.gene68457 | 0.841343 | 5.03E-58 | -1.69E-46 |
| MS.gene053420 | MS.gene68457 | -0.841378 | 4.93E-58 | -1.69E-46 |
| MS.gene053436 | MS.gene68457 | 0.81479 | 1.29E-51 | -1.69E-46 |
| MS.gene053505 | MS.gene68457 | 0.842969 | 1.87E-58 | -1.69E-46 |
| MS.gene053561 | MS.gene68457 | -0.833463 | 5.26E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene68457 | 0.862815 | 3.88E-64 | -1.69E-46 |
| MS.gene053626 | MS.gene68457 | 0.861131 | 1.27E-63 | -1.69E-46 |
| MS.gene053632 | MS.gene68457 | 0.824025 | 1.01E-53 | -1.69E-46 |
| MS.gene053633 | MS.gene68457 | 0.850545 | 1.58E-60 | -1.69E-46 |
| MS.gene053813 | MS.gene68457 | 0.80125 | 9.84E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene68457 | 0.833009 | 6.82E-56 | -1.69E-46 |
| MS.gene053916 | MS.gene68457 | 0.831556 | 1.56E-55 | -1.69E-46 |
| MS.gene054003 | MS.gene68457 | 0.880098 | 7.26E-70 | -1.69E-46 |
| MS.gene054595 | MS.gene68457 | 0.875279 | 3.49E-68 | -1.69E-46 |
| MS.gene054600 | MS.gene68457 | 0.813321 | 2.72E-51 | -1.69E-46 |
| MS.gene054616 | MS.gene68457 | -0.802699 | 4.96E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene68457 | 0.84462 | 6.75E-59 | -1.69E-46 |
| MS.gene054706 | MS.gene68457 | -0.816069 | 6.69E-52 | -1.69E-46 |
| MS.gene054707 | MS.gene68457 | -0.802766 | 4.80E-49 | -1.69E-46 |
| MS.gene054708 | MS.gene68457 | -0.814154 | 1.78E-51 | -1.69E-46 |
| MS.gene05494 | MS.gene68457 | 0.802246 | 6.15E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene68457 | 0.857653 | 1.41E-62 | -1.69E-46 |
| MS.gene05505 | MS.gene68457 | 0.82204 | 2.93E-53 | -1.69E-46 |
| MS.gene055124 | MS.gene68457 | -0.804474 | 2.12E-49 | -1.69E-46 |
| MS.gene055154 | MS.gene68457 | -0.829265 | 5.67E-55 | -1.69E-46 |
| MS.gene055202 | MS.gene68457 | -0.828391 | 9.23E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene68457 | 0.804282 | 2.33E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene68457 | 0.815802 | 7.67E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene68457 | 0.838871 | 2.22E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene68457 | 0.866278 | 3.20E-65 | -1.69E-46 |
| MS.gene055577 | MS.gene68457 | 0.86018 | 2.47E-63 | -1.69E-46 |
| MS.gene055634 | MS.gene68457 | 0.805614 | 1.23E-49 | -1.69E-46 |
| MS.gene055636 | MS.gene68457 | 0.8131 | 3.04E-51 | -1.69E-46 |
| MS.gene055638 | MS.gene68457 | 0.828132 | 1.07E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene68457 | 0.852438 | 4.62E-61 | -1.69E-46 |
| MS.gene055750 | MS.gene68457 | 0.820123 | 8.10E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene68457 | 0.803345 | 3.64E-49 | -1.69E-46 |
| MS.gene055776 | MS.gene68457 | 0.801522 | 8.65E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene68457 | 0.814717 | 1.34E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene68457 | 0.836896 | 7.15E-57 | -1.69E-46 |
| MS.gene055941 | MS.gene68457 | 0.834717 | 2.55E-56 | -1.69E-46 |
| MS.gene056046 | MS.gene68457 | 0.831221 | 1.89E-55 | -1.69E-46 |
| MS.gene056166 | MS.gene68457 | 0.821001 | 5.09E-53 | -1.69E-46 |
| MS.gene056309 | MS.gene68457 | -0.800651 | 1.30E-48 | -1.69E-46 |
| MS.gene056313 | MS.gene68457 | -0.803405 | 3.54E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene68457 | 0.816034 | 6.81E-52 | -1.69E-46 |
| MS.gene056422 | MS.gene68457 | 0.858486 | 7.97E-63 | -1.69E-46 |
| MS.gene056448 | MS.gene68457 | 0.843809 | 1.12E-58 | -1.69E-46 |
| MS.gene056487 | MS.gene68457 | 0.809778 | 1.60E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene68457 | 0.870805 | 1.11E-66 | -1.69E-46 |
| MS.gene056510 | MS.gene68457 | 0.864516 | 1.15E-64 | -1.69E-46 |
| MS.gene056549 | MS.gene68457 | 0.828069 | 1.10E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene68457 | 0.852506 | 4.42E-61 | -1.69E-46 |
| MS.gene056878 | MS.gene68457 | 0.834327 | 3.20E-56 | -1.69E-46 |
| MS.gene056942 | MS.gene68457 | 0.80628 | 8.88E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene68457 | 0.812075 | 5.09E-51 | -1.69E-46 |
| MS.gene057086 | MS.gene68457 | 0.857343 | 1.74E-62 | -1.69E-46 |
| MS.gene057173 | MS.gene68457 | -0.80685 | 6.73E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene68457 | 0.807394 | 5.16E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene68457 | 0.822033 | 2.94E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene68457 | 0.81167 | 6.23E-51 | -1.69E-46 |
| MS.gene057857 | MS.gene68457 | 0.803911 | 2.78E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene68457 | 0.809807 | 1.58E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene68457 | 0.857303 | 1.79E-62 | -1.69E-46 |
| MS.gene058041 | MS.gene68457 | 0.820056 | 8.39E-53 | -1.69E-46 |
| MS.gene058130 | MS.gene68457 | 0.817937 | 2.54E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene68457 | 0.837972 | 3.79E-57 | -1.69E-46 |
| MS.gene058171 | MS.gene68457 | -0.853968 | 1.68E-61 | -1.69E-46 |
| MS.gene058173 | MS.gene68457 | -0.850058 | 2.17E-60 | -1.69E-46 |
| MS.gene058175 | MS.gene68457 | -0.857416 | 1.66E-62 | -1.69E-46 |
| MS.gene058183 | MS.gene68457 | 0.825314 | 5.01E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene68457 | 0.843911 | 1.05E-58 | -1.69E-46 |
| MS.gene058419 | MS.gene68457 | 0.843104 | 1.72E-58 | -1.69E-46 |
| MS.gene058459 | MS.gene68457 | 0.826701 | 2.35E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene68457 | 0.851376 | 9.24E-61 | -1.69E-46 |
| MS.gene058840 | MS.gene68457 | -0.836599 | 8.51E-57 | -1.69E-46 |
| MS.gene059022 | MS.gene68457 | 0.849495 | 3.12E-60 | -1.69E-46 |
| MS.gene059023 | MS.gene68457 | 0.809417 | 1.91E-50 | -1.69E-46 |
| MS.gene059029 | MS.gene68457 | 0.803138 | 4.02E-49 | -1.69E-46 |
| MS.gene059034 | MS.gene68457 | 0.811559 | 6.59E-51 | -1.69E-46 |
| MS.gene059037 | MS.gene68457 | -0.813739 | 2.20E-51 | -1.69E-46 |
| MS.gene059045 | MS.gene68457 | -0.830228 | 3.31E-55 | -1.69E-46 |
| MS.gene05913 | MS.gene68457 | 0.877309 | 6.97E-69 | -1.69E-46 |
| MS.gene059305 | MS.gene68457 | 0.817957 | 2.52E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene68457 | 0.816147 | 6.42E-52 | -1.69E-46 |
| MS.gene059367 | MS.gene68457 | 0.880799 | 4.07E-70 | -1.69E-46 |
| MS.gene059368 | MS.gene68457 | 0.836698 | 8.04E-57 | -1.69E-46 |
| MS.gene059677 | MS.gene68457 | 0.827661 | 1.38E-54 | -1.69E-46 |
| MS.gene059699 | MS.gene68457 | -0.803492 | 3.40E-49 | -1.69E-46 |
| MS.gene059703 | MS.gene68457 | -0.817109 | 3.91E-52 | -1.69E-46 |
| MS.gene059711 | MS.gene68457 | 0.825953 | 3.54E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene68457 | 0.853615 | 2.13E-61 | -1.69E-46 |
| MS.gene059801 | MS.gene68457 | 0.801724 | 7.87E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene68457 | 0.875772 | 2.37E-68 | -1.69E-46 |
| MS.gene059902 | MS.gene68457 | 0.840256 | 9.70E-58 | -1.69E-46 |
| MS.gene059943 | MS.gene68457 | -0.817189 | 3.75E-52 | -1.69E-46 |
| MS.gene06000 | MS.gene68457 | 0.811728 | 6.05E-51 | -1.69E-46 |
| MS.gene060295 | MS.gene68457 | 0.800437 | 1.44E-48 | -1.69E-46 |
| MS.gene060482 | MS.gene68457 | 0.899962 | 1.18E-77 | -1.69E-46 |
| MS.gene060595 | MS.gene68457 | -0.824761 | 6.77E-54 | -1.69E-46 |
| MS.gene060703 | MS.gene68457 | 0.831978 | 1.23E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene68457 | 0.837801 | 4.19E-57 | -1.69E-46 |
| MS.gene060778 | MS.gene68457 | 0.866369 | 3.00E-65 | -1.69E-46 |
| MS.gene06077 | MS.gene68457 | 0.838609 | 2.60E-57 | -1.69E-46 |
| MS.gene060804 | MS.gene68457 | 0.802157 | 6.41E-49 | -1.69E-46 |
| MS.gene060818 | MS.gene68457 | 0.816267 | 6.04E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene68457 | 0.800797 | 1.22E-48 | -1.69E-46 |
| MS.gene060837 | MS.gene68457 | 0.828613 | 8.15E-55 | -1.69E-46 |
| MS.gene06097 | MS.gene68457 | 0.8132 | 2.89E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene68457 | 0.849371 | 3.38E-60 | -1.69E-46 |
| MS.gene061134 | MS.gene68457 | 0.874774 | 5.19E-68 | -1.69E-46 |
| MS.gene061200 | MS.gene68457 | 0.815268 | 1.01E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68457.t1 | MTR_1g090380 | 96.099 | 282 | 4 | 1 | 43 | 324 | 1 | 275 | 0.0 | 554 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68457.t1 | AT2G38680 | 68.531 | 286 | 85 | 4 | 42 | 324 | 40 | 323 | 3.47e-137 | 392 |
Find 64 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAATGGAGGATATCAAAT+TGG | 0.201664 | 1.1:-66021375 | MS.gene68457:CDS |
| ATGCCACATTAACAAAGTTT+TGG | 0.238917 | 1.1:-66020786 | MS.gene68457:CDS |
| CGCTGGTCCTCAAAAGCTTC+AGG | 0.241520 | 1.1:-66021285 | MS.gene68457:intron |
| TCCAATATTAACAGGTTCTA+AGG | 0.257059 | 1.1:-66019858 | MS.gene68457:intron |
| AGAACCAATGTTCTCCTTCT+TGG | 0.265210 | 1.1:-66019222 | MS.gene68457:CDS |
| TTCATATAACTGCTGCCTTT+TGG | 0.338973 | 1.1:+66020605 | None:intergenic |
| TCACCGAATCGTTCGTGAAC+AGG | 0.376885 | 1.1:+66019285 | None:intergenic |
| AGTTTGTTGTGGAGCAAAAC+AGG | 0.387622 | 1.1:+66021323 | None:intergenic |
| AAATGAGCATGCTCTTGATA+TGG | 0.389669 | 1.1:-66019313 | MS.gene68457:CDS |
| TTGTGGAAAACATTTGGAAA+TGG | 0.410077 | 1.1:-66021390 | MS.gene68457:CDS |
| GAAATGGAGGATATCAAATT+GGG | 0.419430 | 1.1:-66021374 | MS.gene68457:CDS |
| TTCAGAATTGACGCTGGTGG+TGG | 0.419541 | 1.1:-66021351 | MS.gene68457:CDS |
| CCTGTATTAATATTCTCTGC+AGG | 0.422018 | 1.1:-66020008 | MS.gene68457:CDS |
| ACGCATGCTCTTCTTATTGA+AGG | 0.428415 | 1.1:-66020282 | MS.gene68457:CDS |
| CCCTTGGGCTGGAAGAGAAA+AGG | 0.437854 | 1.1:-66020554 | MS.gene68457:CDS |
| CCTGCAGAGAATATTAATAC+AGG | 0.451901 | 1.1:+66020008 | None:intergenic |
| TGGTGATCACACTGGAGACT+TGG | 0.455229 | 1.1:-66019202 | MS.gene68457:CDS |
| GAACGATTCGGTGATATTGA+TGG | 0.458869 | 1.1:-66019276 | MS.gene68457:CDS |
| CTGGATTATCCTGCTGCAAA+AGG | 0.467977 | 1.1:+66020637 | None:intergenic |
| AACCCAAAACTTTGTTAATG+TGG | 0.470399 | 1.1:+66020783 | None:intergenic |
| ATGTGAAGATAGTATCCAAC+AGG | 0.474848 | 1.1:-66019810 | MS.gene68457:CDS |
| CTTGCTGCAATTCGTTCCGC+TGG | 0.481743 | 1.1:-66021302 | MS.gene68457:CDS |
| AGTTGGAGGCGATAGCTCAT+TGG | 0.482900 | 1.1:+66021583 | None:intergenic |
| AGTTGGTGGTGACGATGGAT+TGG | 0.487760 | 1.1:+66021560 | None:intergenic |
| AGCAAGTCATTGTCATCAGT+TGG | 0.490335 | 1.1:+66019252 | None:intergenic |
| TGGTGACGATGGATTGGAGT+TGG | 0.494711 | 1.1:+66021566 | None:intergenic |
| GAGCCTGTTCACGAACGATT+CGG | 0.505027 | 1.1:-66019288 | MS.gene68457:CDS |
| TACGATACTCGAATTTCTGT+GGG | 0.505866 | 1.1:-66019159 | MS.gene68457:CDS |
| TGGAAAACATTTGGAAATGG+AGG | 0.511488 | 1.1:-66021387 | MS.gene68457:CDS |
| CACCTTTAAAAGATACAAGT+TGG | 0.511666 | 1.1:+66019770 | None:intergenic |
| ATCCAGAATATGATGCCAAA+AGG | 0.511735 | 1.1:-66020620 | MS.gene68457:CDS |
| ATTGTTAAATACCATCCTGT+TGG | 0.514081 | 1.1:+66019795 | None:intergenic |
| ATATGAACATTACCATCCAT+TGG | 0.515894 | 1.1:-66020589 | MS.gene68457:CDS |
| CTGTATTAATATTCTCTGCA+GGG | 0.521088 | 1.1:-66020007 | MS.gene68457:CDS |
| GAGTCATTTGTAGGCAGTCA+TGG | 0.540817 | 1.1:-66020660 | MS.gene68457:intron |
| CTCCTTCTTGGTGATCACAC+TGG | 0.541831 | 1.1:-66019210 | MS.gene68457:CDS |
| GGTGATCACACTGGAGACTT+GGG | 0.548044 | 1.1:-66019201 | MS.gene68457:CDS |
| TCAGAATTGACGCTGGTGGT+GGG | 0.550336 | 1.1:-66021350 | MS.gene68457:CDS |
| GAATTGCAGCAAGTTTGTTG+TGG | 0.553040 | 1.1:+66021312 | None:intergenic |
| GCTACACTTCTTCAACATCA+AGG | 0.560582 | 1.1:-66021516 | MS.gene68457:intron |
| AAAGTGACGTGGGAGAAAGT+TGG | 0.564371 | 1.1:+66021543 | None:intergenic |
| GAGAAAGTTGGTGGTGACGA+TGG | 0.566081 | 1.1:+66021555 | None:intergenic |
| TAGGAGAAAATTCCAATGGA+TGG | 0.567633 | 1.1:+66020577 | None:intergenic |
| TGATGTTGAAGAAGTGTAGC+GGG | 0.570667 | 1.1:+66021519 | None:intergenic |
| GGAGACTTGGGAATGTCTGA+TGG | 0.575829 | 1.1:-66019189 | MS.gene68457:CDS |
| TTACGATACTCGAATTTCTG+TGG | 0.585256 | 1.1:-66019160 | MS.gene68457:CDS |
| TGACGATGGATTGGAGTTGG+AGG | 0.602766 | 1.1:+66021569 | None:intergenic |
| AAAGGAAACTCATGGTAGAG+TGG | 0.614036 | 1.1:-66020536 | MS.gene68457:intron |
| TTCTCTTCCAGCCCAAGGGT+AGG | 0.615641 | 1.1:+66020558 | None:intergenic |
| CTCCAGTGTGATCACCAAGA+AGG | 0.618740 | 1.1:+66019208 | None:intergenic |
| CATGCTCTTCTTATTGAAGG+AGG | 0.621492 | 1.1:-66020279 | MS.gene68457:CDS |
| AGGGTAGGAGAAAATTCCAA+TGG | 0.624608 | 1.1:+66020573 | None:intergenic |
| GGAAGAGAAAAGGAAACTCA+TGG | 0.628987 | 1.1:-66020544 | MS.gene68457:CDS |
| GTGACGTGGGAGAAAGTTGG+TGG | 0.633859 | 1.1:+66021546 | None:intergenic |
| GCTTGCTGATATCATTGAAG+AGG | 0.634896 | 1.1:-66019985 | MS.gene68457:intron |
| AACAGGATGGTATTTAACAA+TGG | 0.634907 | 1.1:-66019793 | MS.gene68457:CDS |
| GAAGATAGTATCCAACAGGA+TGG | 0.654156 | 1.1:-66019806 | MS.gene68457:CDS |
| ATCACCAAGAAGGAGAACAT+TGG | 0.655582 | 1.1:+66019218 | None:intergenic |
| GTGTAGCGGGAAAAGTGACG+TGG | 0.663698 | 1.1:+66021532 | None:intergenic |
| ATTGGGTTCAGAATTGACGC+TGG | 0.663874 | 1.1:-66021357 | MS.gene68457:CDS |
| GGGTTCAGAATTGACGCTGG+TGG | 0.671068 | 1.1:-66021354 | MS.gene68457:CDS |
| TTGATGTTGAAGAAGTGTAG+CGG | 0.688175 | 1.1:+66021518 | None:intergenic |
| TAAGTGAGTTCTCAACGTTG+TGG | 0.688216 | 1.1:+66018993 | None:intergenic |
| TGTAGCGGGAAAAGTGACGT+GGG | 0.689625 | 1.1:+66021533 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAAATCTTAGAATT+TGG | + | chr1.1:66019705-66019724 | None:intergenic | 10.0% |
| !! | AAATATAAATCTTAGAATTT+GGG | + | chr1.1:66019704-66019723 | None:intergenic | 10.0% |
| !!! | ATGTAATTTTTTTTCTTTTA+AGG | - | chr1.1:66019105-66019124 | MS.gene68457:intron | 10.0% |
| !!! | ATTTATATTTTCTTTTTTGT+AGG | - | chr1.1:66019714-66019733 | MS.gene68457:intron | 10.0% |
| !!! | CTGTTTTTTTTTTTTTTTAT+GGG | - | chr1.1:66020089-66020108 | MS.gene68457:intron | 10.0% |
| !!! | TCTGTTTTTTTTTTTTTTTA+TGG | - | chr1.1:66020088-66020107 | MS.gene68457:intron | 10.0% |
| !!! | TGTAATTTTTTTTCTTTTAA+GGG | - | chr1.1:66019106-66019125 | MS.gene68457:intron | 10.0% |
| !! | AAAAAAAATTACATGCAATA+AGG | + | chr1.1:66019099-66019118 | None:intergenic | 15.0% |
| !! | AAAAAAATTACATGCAATAA+GGG | + | chr1.1:66019098-66019117 | None:intergenic | 15.0% |
| !! | AAAAATAACAAAATGGAAAA+TGG | + | chr1.1:66020495-66020514 | None:intergenic | 15.0% |
| !! | ATATATTTGTCAAAGAAAAA+TGG | + | chr1.1:66020382-66020401 | None:intergenic | 15.0% |
| !!! | TCATCTTAAGTTTTTATATT+CGG | + | chr1.1:66019582-66019601 | None:intergenic | 15.0% |
| !! | AAAAAATTACATGCAATAAG+GGG | + | chr1.1:66019097-66019116 | None:intergenic | 20.0% |
| !! | AAACTCAATTATCAATGAAA+TGG | + | chr1.1:66019291-66019310 | None:intergenic | 20.0% |
| !! | AACTCAATTATCAATGAAAT+GGG | + | chr1.1:66019290-66019309 | None:intergenic | 20.0% |
| !! | AATACACAATAAATGAAAGT+TGG | + | chr1.1:66020805-66020824 | None:intergenic | 20.0% |
| !! | CATAATAATTAATTGCCTTT+AGG | - | chr1.1:66020884-66020903 | MS.gene68457:intron | 20.0% |
| !! | TAATTGCATAACACAAAATT+GGG | - | chr1.1:66019355-66019374 | MS.gene68457:intron | 20.0% |
| !! | TTAATTATTATGTAATTCCC+CGG | + | chr1.1:66020876-66020895 | None:intergenic | 20.0% |
| !! | TTTCCTGAAAAATAACAAAA+TGG | + | chr1.1:66020502-66020521 | None:intergenic | 20.0% |
| !!! | AAGTCTATTTTGTTTTATGT+TGG | - | chr1.1:66020582-66020601 | MS.gene68457:CDS | 20.0% |
| !!! | TATGCAAATATATTTTTCAG+AGG | - | chr1.1:66020850-66020869 | MS.gene68457:intron | 20.0% |
| !!! | TGATATGTTCATTTTATATC+AGG | - | chr1.1:66020414-66020433 | MS.gene68457:intron | 20.0% |
| !!! | TTAAGATTTGGTGTATTATT+AGG | - | chr1.1:66020224-66020243 | MS.gene68457:CDS | 20.0% |
| !!! | TTTCCATTTTGTTATTTTTC+AGG | - | chr1.1:66020496-66020515 | MS.gene68457:intron | 20.0% |
| ! | AAAAATTACATGCAATAAGG+GGG | + | chr1.1:66019096-66019115 | None:intergenic | 25.0% |
| ! | AAATTCTCAATCCTACAAAA+CGG | + | chr1.1:66019678-66019697 | None:intergenic | 25.0% |
| ! | AATAGTCATGTAACATACTT+TGG | + | chr1.1:66019795-66019814 | None:intergenic | 25.0% |
| ! | ACCAGAAAAAAAATTAAGTC+AGG | + | chr1.1:66021505-66021524 | None:intergenic | 25.0% |
| ! | ACTCAATTATCAATGAAATG+GGG | + | chr1.1:66019289-66019308 | None:intergenic | 25.0% |
| ! | ATTTAATTATGTTTAAGCCC+TGG | - | chr1.1:66020954-66020973 | MS.gene68457:intron | 25.0% |
| ! | CAAGCATTATTATATAGTGT+GGG | + | chr1.1:66019461-66019480 | None:intergenic | 25.0% |
| ! | CCAGAAAAAAAATTAAGTCA+GGG | + | chr1.1:66021504-66021523 | None:intergenic | 25.0% |
| ! | GTAATTGCATAACACAAAAT+TGG | - | chr1.1:66019354-66019373 | MS.gene68457:intron | 25.0% |
| ! | TCAAGCATTATTATATAGTG+TGG | + | chr1.1:66019462-66019481 | None:intergenic | 25.0% |
| ! | TGTAAAATTGAGATACTAGT+GGG | - | chr1.1:66019509-66019528 | MS.gene68457:intron | 25.0% |
| ! | TTGTAAAATTGAGATACTAG+TGG | - | chr1.1:66019508-66019527 | MS.gene68457:intron | 25.0% |
| ! | TTTATTGTGTATTTGTTTGC+TGG | - | chr1.1:66020812-66020831 | MS.gene68457:intron | 25.0% |
| !! | ATTTCTCTTCATTTTCTTGT+CGG | - | chr1.1:66020619-66020638 | MS.gene68457:CDS | 25.0% |
| !! | ATTTTGTATAGGAGAAAACA+AGG | + | chr1.1:66021081-66021100 | None:intergenic | 25.0% |
| !! | GTATCTCAATTTTACAAAAG+TGG | + | chr1.1:66019505-66019524 | None:intergenic | 25.0% |
| !! | TAATGCTAACATAGCTTTTA+GGG | - | chr1.1:66020315-66020334 | MS.gene68457:intron | 25.0% |
| !! | TACTATCTTCACATTTTTGA+AGG | + | chr1.1:66020722-66020741 | None:intergenic | 25.0% |
| !! | TCGAAAATCTGATTTTGTAT+AGG | + | chr1.1:66021092-66021111 | None:intergenic | 25.0% |
| !!! | ATTTTGTTGTGGAAAACATT+TGG | - | chr1.1:66019142-66019161 | MS.gene68457:intron | 25.0% |
| !!! | TATTTTGTTTTATGTTGGCA+AGG | - | chr1.1:66020587-66020606 | MS.gene68457:CDS | 25.0% |
| !!! | TGTTTAAGAGTCTCATTTTT+GGG | - | chr1.1:66019542-66019561 | MS.gene68457:intron | 25.0% |
| !!! | TTAACAAAGTTTTGGGTTAA+TGG | - | chr1.1:66019760-66019779 | MS.gene68457:intron | 25.0% |
| AAAATTACATGCAATAAGGG+GGG | + | chr1.1:66019095-66019114 | None:intergenic | 30.0% | |
| AAAGGTAAAAAAGAGAAGAG+GGG | + | chr1.1:66019066-66019085 | None:intergenic | 30.0% | |
| AACAGGATGGTATTTAACAA+TGG | - | chr1.1:66020745-66020764 | MS.gene68457:intron | 30.0% | |
| AACCCAAAACTTTGTTAATG+TGG | + | chr1.1:66019758-66019777 | None:intergenic | 30.0% | |
| ATATGAACATTACCATCCAT+TGG | - | chr1.1:66019949-66019968 | MS.gene68457:intron | 30.0% | |
| ATTGTTAAATACCATCCTGT+TGG | + | chr1.1:66020746-66020765 | None:intergenic | 30.0% | |
| CTCCAAAAATTCAAAAAGCT+CGG | + | chr1.1:66020350-66020369 | None:intergenic | 30.0% | |
| CTGTATTAATATTCTCTGCA+GGG | - | chr1.1:66020531-66020550 | MS.gene68457:intron | 30.0% | |
| GAAAGGTAAAAAAGAGAAGA+GGG | + | chr1.1:66019067-66019086 | None:intergenic | 30.0% | |
| GAAATGGAGGATATCAAATT+GGG | - | chr1.1:66019164-66019183 | MS.gene68457:CDS | 30.0% | |
| GAGCTCAATTAATGTCTATA+AGG | - | chr1.1:66021457-66021476 | MS.gene68457:intron | 30.0% | |
| GTAACTAGTAAGTAAACTCT+GGG | + | chr1.1:66020135-66020154 | None:intergenic | 30.0% | |
| TAACTAGTAAGTAAACTCTG+GGG | + | chr1.1:66020134-66020153 | None:intergenic | 30.0% | |
| TATCTAATCGAGTCATTTGT+AGG | - | chr1.1:66019869-66019888 | MS.gene68457:intron | 30.0% | |
| TCCAATATTAACAGGTTCTA+AGG | - | chr1.1:66020680-66020699 | MS.gene68457:intron | 30.0% | |
| TGATGCTGTAACTTAAGATT+TGG | - | chr1.1:66020212-66020231 | MS.gene68457:CDS | 30.0% | |
| TGTAACTAGTAAGTAAACTC+TGG | + | chr1.1:66020136-66020155 | None:intergenic | 30.0% | |
| TTGTGGAAAACATTTGGAAA+TGG | - | chr1.1:66019148-66019167 | MS.gene68457:intron | 30.0% | |
| ! | ATGCCACATTAACAAAGTTT+TGG | - | chr1.1:66019752-66019771 | MS.gene68457:intron | 30.0% |
| ! | CACCTTTAAAAGATACAAGT+TGG | + | chr1.1:66020771-66020790 | None:intergenic | 30.0% |
| ! | CTAATGCTAACATAGCTTTT+AGG | - | chr1.1:66020314-66020333 | MS.gene68457:intron | 30.0% |
| ! | GTGTTTAAGAGTCTCATTTT+TGG | - | chr1.1:66019541-66019560 | MS.gene68457:intron | 30.0% |
| ! | TCCTAATTTTTGACGTGTAA+GGG | + | chr1.1:66019837-66019856 | None:intergenic | 30.0% |
| ! | TCGTTTTCTACATTTTGTTG+TGG | - | chr1.1:66019131-66019150 | MS.gene68457:intron | 30.0% |
| ! | TGCCACATTAACAAAGTTTT+GGG | - | chr1.1:66019753-66019772 | MS.gene68457:intron | 30.0% |
| ! | TTCCGAGCTTTTTGAATTTT+TGG | - | chr1.1:66020345-66020364 | MS.gene68457:intron | 30.0% |
| ! | TTCCTAATTTTTGACGTGTA+AGG | + | chr1.1:66019838-66019857 | None:intergenic | 30.0% |
| !! | AAATATATTTTTCAGAGGCC+GGG | - | chr1.1:66020855-66020874 | MS.gene68457:intron | 30.0% |
| !! | AGATTTGGTGTATTATTAGG+TGG | - | chr1.1:66020227-66020246 | MS.gene68457:CDS | 30.0% |
| !! | ATTTGGTGTATTATTAGGTG+GGG | - | chr1.1:66020229-66020248 | MS.gene68457:CDS | 30.0% |
| !! | CAAATATATTTTTCAGAGGC+CGG | - | chr1.1:66020854-66020873 | MS.gene68457:intron | 30.0% |
| !! | GATTTGGTGTATTATTAGGT+GGG | - | chr1.1:66020228-66020247 | MS.gene68457:CDS | 30.0% |
| !! | TACTTCTCAATTTTGATCAC+AGG | - | chr1.1:66021178-66021197 | MS.gene68457:intron | 30.0% |
| !!! | CCCTGACTTAATTTTTTTTC+TGG | - | chr1.1:66021501-66021520 | MS.gene68457:intron | 30.0% |
| !!! | TCGCTTTTTCCAATATTAAC+AGG | - | chr1.1:66020672-66020691 | MS.gene68457:intron | 30.0% |
| AAATCACAGCAATTAGAGTC+TGG | + | chr1.1:66021427-66021446 | None:intergenic | 35.0% | |
| AAATGAGCATGCTCTTGATA+TGG | - | chr1.1:66021225-66021244 | MS.gene68457:intron | 35.0% | |
| AACTAGTAAGTAAACTCTGG+GGG | + | chr1.1:66020133-66020152 | None:intergenic | 35.0% | |
| AAGGTAAAAAAGAGAAGAGG+GGG | + | chr1.1:66019065-66019084 | None:intergenic | 35.0% | |
| ATCCAGAATATGATGCCAAA+AGG | - | chr1.1:66019918-66019937 | MS.gene68457:intron | 35.0% | |
| ATGTGAAGATAGTATCCAAC+AGG | - | chr1.1:66020728-66020747 | MS.gene68457:intron | 35.0% | |
| ATTGAATATCACTGTACCTC+TGG | + | chr1.1:66020179-66020198 | None:intergenic | 35.0% | |
| CCTGCAGAGAATATTAATAC+AGG | + | chr1.1:66020533-66020552 | None:intergenic | 35.0% | |
| CCTGTATTAATATTCTCTGC+AGG | - | chr1.1:66020530-66020549 | MS.gene68457:intron | 35.0% | |
| GCCTTAGAACCTGTTAATAT+TGG | + | chr1.1:66020684-66020703 | None:intergenic | 35.0% | |
| GGAAAGGTAAAAAAGAGAAG+AGG | + | chr1.1:66019068-66019087 | None:intergenic | 35.0% | |
| GGAAATGGAGGATATCAAAT+TGG | - | chr1.1:66019163-66019182 | MS.gene68457:CDS | 35.0% | |
| GTATTACCAGTGAAACCTAA+AGG | + | chr1.1:66020902-66020921 | None:intergenic | 35.0% | |
| TACGATACTCGAATTTCTGT+GGG | - | chr1.1:66021379-66021398 | MS.gene68457:CDS | 35.0% | |
| TAGGAGAAAATTCCAATGGA+TGG | + | chr1.1:66019964-66019983 | None:intergenic | 35.0% | |
| TCCCTTACACGTCAAAAATT+AGG | - | chr1.1:66019833-66019852 | MS.gene68457:CDS | 35.0% | |
| TGGAAAACATTTGGAAATGG+AGG | - | chr1.1:66019151-66019170 | MS.gene68457:intron | 35.0% | |
| TTACGATACTCGAATTTCTG+TGG | - | chr1.1:66021378-66021397 | MS.gene68457:CDS | 35.0% | |
| ! | ACCTTACAAATCCGTTTTGT+AGG | - | chr1.1:66019664-66019683 | MS.gene68457:intron | 35.0% |
| ! | CAATGCTGGTCTACATATAT+AGG | - | chr1.1:66020042-66020061 | MS.gene68457:intron | 35.0% |
| ! | GAAAAAACCTGAAGCTTTTG+AGG | + | chr1.1:66019263-66019282 | None:intergenic | 35.0% |
| ! | GGCCAACTTGTATCTTTTAA+AGG | - | chr1.1:66020766-66020785 | MS.gene68457:CDS | 35.0% |
| ! | TAATTGCCTTTAGGTTTCAC+TGG | - | chr1.1:66020893-66020912 | MS.gene68457:intron | 35.0% |
| ! | TCCTACAAAACGGATTTGTA+AGG | + | chr1.1:66019668-66019687 | None:intergenic | 35.0% |
| ! | TTCATATAACTGCTGCCTTT+TGG | + | chr1.1:66019936-66019955 | None:intergenic | 35.0% |
| ! | TTGATGTTGAAGAAGTGTAG+CGG | + | chr1.1:66019023-66019042 | None:intergenic | 35.0% |
| !! | AATATATTTTTCAGAGGCCG+GGG | - | chr1.1:66020856-66020875 | MS.gene68457:intron | 35.0% |
| !! | CGAGCTTTTTGAATTTTTGG+AGG | - | chr1.1:66020348-66020367 | MS.gene68457:intron | 35.0% |
| !! | CTGGTATTTTGAATTGTTGC+AGG | - | chr1.1:66021520-66021539 | MS.gene68457:CDS | 35.0% |
| !! | TAAGAGTCTCATTTTTGGGA+GGG | - | chr1.1:66019546-66019565 | MS.gene68457:intron | 35.0% |
| !! | TTAAGAGTCTCATTTTTGGG+AGG | - | chr1.1:66019545-66019564 | MS.gene68457:intron | 35.0% |
| AAAGGAAACTCATGGTAGAG+TGG | - | chr1.1:66020002-66020021 | MS.gene68457:CDS | 40.0% | |
| ACGCATGCTCTTCTTATTGA+AGG | - | chr1.1:66020256-66020275 | MS.gene68457:CDS | 40.0% | |
| AGAACCAATGTTCTCCTTCT+TGG | - | chr1.1:66021316-66021335 | MS.gene68457:CDS | 40.0% | |
| AGCAAGTCATTGTCATCAGT+TGG | + | chr1.1:66021289-66021308 | None:intergenic | 40.0% | |
| AGGGTAGGAGAAAATTCCAA+TGG | + | chr1.1:66019968-66019987 | None:intergenic | 40.0% | |
| ATCACCAAGAAGGAGAACAT+TGG | + | chr1.1:66021323-66021342 | None:intergenic | 40.0% | |
| CATGCTCTTCTTATTGAAGG+AGG | - | chr1.1:66020259-66020278 | MS.gene68457:CDS | 40.0% | |
| GAAGATAGTATCCAACAGGA+TGG | - | chr1.1:66020732-66020751 | MS.gene68457:intron | 40.0% | |
| GAAGATTCGATTGCTGACAT+TGG | - | chr1.1:66020466-66020485 | MS.gene68457:intron | 40.0% | |
| GCTACACTTCTTCAACATCA+AGG | - | chr1.1:66019022-66019041 | MS.gene68457:intron | 40.0% | |
| GGAAGAGAAAAGGAAACTCA+TGG | - | chr1.1:66019994-66020013 | MS.gene68457:CDS | 40.0% | |
| TAAGTGAGTTCTCAACGTTG+TGG | + | chr1.1:66021548-66021567 | None:intergenic | 40.0% | |
| TATATAGTGTGGGACTTCTC+AGG | + | chr1.1:66019451-66019470 | None:intergenic | 40.0% | |
| TGGTAGAGTGGTATGTGATT+CGG | - | chr1.1:66020014-66020033 | MS.gene68457:CDS | 40.0% | |
| ! | GCTTGCTGATATCATTGAAG+AGG | - | chr1.1:66020553-66020572 | MS.gene68457:CDS | 40.0% |
| ! | TGATGTTGAAGAAGTGTAGC+GGG | + | chr1.1:66019022-66019041 | None:intergenic | 40.0% |
| ! | TGCCTTTTGGCATCATATTC+TGG | + | chr1.1:66019923-66019942 | None:intergenic | 40.0% |
| ! | TGGAATTTTCTCCTACCCTT+GGG | - | chr1.1:66019969-66019988 | MS.gene68457:intron | 40.0% |
| ! | TTGGAATTTTCTCCTACCCT+TGG | - | chr1.1:66019968-66019987 | MS.gene68457:intron | 40.0% |
| !! | AGTTTGTTGTGGAGCAAAAC+AGG | + | chr1.1:66019218-66019237 | None:intergenic | 40.0% |
| !! | GAACGATTCGGTGATATTGA+TGG | - | chr1.1:66021262-66021281 | MS.gene68457:intron | 40.0% |
| !! | GAATTGCAGCAAGTTTGTTG+TGG | + | chr1.1:66019229-66019248 | None:intergenic | 40.0% |
| !! | GCTAACATAGCTTTTAGGGA+AGG | - | chr1.1:66020319-66020338 | MS.gene68457:intron | 40.0% |
| !!! | TTTTGGGTTAATGGAACTCG+CGG | - | chr1.1:66019769-66019788 | MS.gene68457:intron | 40.0% |
| AAAGTGACGTGGGAGAAAGT+TGG | + | chr1.1:66018998-66019017 | None:intergenic | 45.0% | |
| AGAGGGGGTGAAGAAGAAAA+AGG | + | chr1.1:66019050-66019069 | None:intergenic | 45.0% | |
| ATTGGGTTCAGAATTGACGC+TGG | - | chr1.1:66019181-66019200 | MS.gene68457:CDS | 45.0% | |
| CTGGATTATCCTGCTGCAAA+AGG | + | chr1.1:66019904-66019923 | None:intergenic | 45.0% | |
| GAGTCATTTGTAGGCAGTCA+TGG | - | chr1.1:66019878-66019897 | MS.gene68457:intron | 45.0% | |
| GAGTGTGACTCGATTGATCT+TGG | + | chr1.1:66019618-66019637 | None:intergenic | 45.0% | |
| ! | TCACACATTTTGTGCACCAG+AGG | - | chr1.1:66020160-66020179 | MS.gene68457:intron | 45.0% |
| !! | ACGTGTAAGGGAGCATTAGA+GGG | + | chr1.1:66019825-66019844 | None:intergenic | 45.0% |
| !! | GTGATTCGGTTTCTCAATGC+TGG | - | chr1.1:66020028-66020047 | MS.gene68457:intron | 45.0% |
| !! | TTTTTCAGACTCACTCGCCA+GGG | + | chr1.1:66020974-66020993 | None:intergenic | 45.0% |
| !!! | TTTTTTCAGACTCACTCGCC+AGG | + | chr1.1:66020975-66020994 | None:intergenic | 45.0% |
| ACACTCCAAATGTGCAGTGG+TGG | - | chr1.1:66019632-66019651 | MS.gene68457:intron | 50.0% | |
| CACTCCAAATGTGCAGTGGT+GGG | - | chr1.1:66019633-66019652 | MS.gene68457:intron | 50.0% | |
| CTCCAGTGTGATCACCAAGA+AGG | + | chr1.1:66021333-66021352 | None:intergenic | 50.0% | |
| GAGCCTGTTCACGAACGATT+CGG | - | chr1.1:66021250-66021269 | MS.gene68457:intron | 50.0% | |
| GGAGACTTGGGAATGTCTGA+TGG | - | chr1.1:66021349-66021368 | MS.gene68457:CDS | 50.0% | |
| GGTGATCACACTGGAGACTT+GGG | - | chr1.1:66021337-66021356 | MS.gene68457:CDS | 50.0% | |
| GTCACACTCCAAATGTGCAG+TGG | - | chr1.1:66019629-66019648 | MS.gene68457:intron | 50.0% | |
| TCACCGAATCGTTCGTGAAC+AGG | + | chr1.1:66021256-66021275 | None:intergenic | 50.0% | |
| TCAGAATTGACGCTGGTGGT+GGG | - | chr1.1:66019188-66019207 | MS.gene68457:CDS | 50.0% | |
| TGGTGATCACACTGGAGACT+TGG | - | chr1.1:66021336-66021355 | MS.gene68457:CDS | 50.0% | |
| TTCAGAATTGACGCTGGTGG+TGG | - | chr1.1:66019187-66019206 | MS.gene68457:CDS | 50.0% | |
| ! | ACATGCAATAAGGGGGGTGT+AGG | + | chr1.1:66019089-66019108 | None:intergenic | 50.0% |
| ! | ATTTTCTCCTACCCTTGGGC+TGG | - | chr1.1:66019973-66019992 | MS.gene68457:intron | 50.0% |
| ! | CAATAAGGGGGGTGTAGGAA+AGG | + | chr1.1:66019084-66019103 | None:intergenic | 50.0% |
| ! | CCTTTTCTCTTCCAGCCCAA+GGG | + | chr1.1:66019987-66020006 | None:intergenic | 50.0% |
| ! | CTCCTTCTTGGTGATCACAC+TGG | - | chr1.1:66021328-66021347 | MS.gene68457:CDS | 50.0% |
| ! | TCCTTTTCTCTTCCAGCCCA+AGG | + | chr1.1:66019988-66020007 | None:intergenic | 50.0% |
| ! | TGTAGCGGGAAAAGTGACGT+GGG | + | chr1.1:66019008-66019027 | None:intergenic | 50.0% |
| ! | TTGAGATACTAGTGGGCGTG+AGG | - | chr1.1:66019516-66019535 | MS.gene68457:intron | 50.0% |
| !! | AGTTGGTGGTGACGATGGAT+TGG | + | chr1.1:66018981-66019000 | None:intergenic | 50.0% |
| !! | CGTGTAAGGGAGCATTAGAG+GGG | + | chr1.1:66019824-66019843 | None:intergenic | 50.0% |
| !! | CTGAAGCTTTTGAGGACCAG+CGG | + | chr1.1:66019255-66019274 | None:intergenic | 50.0% |
| !! | GACGTGTAAGGGAGCATTAG+AGG | + | chr1.1:66019826-66019845 | None:intergenic | 50.0% |
| !! | GAGAAAGTTGGTGGTGACGA+TGG | + | chr1.1:66018986-66019005 | None:intergenic | 50.0% |
| !! | TGACGATGGATTGGAGTTGG+AGG | + | chr1.1:66018972-66018991 | None:intergenic | 50.0% |
| !! | TGGTGACGATGGATTGGAGT+TGG | + | chr1.1:66018975-66018994 | None:intergenic | 50.0% |
| ACTGCCCACCACTGCACATT+TGG | + | chr1.1:66019640-66019659 | None:intergenic | 55.0% | |
| CGCTGGTCCTCAAAAGCTTC+AGG | - | chr1.1:66019253-66019272 | MS.gene68457:CDS | 55.0% | |
| CTTGCTGCAATTCGTTCCGC+TGG | - | chr1.1:66019236-66019255 | MS.gene68457:CDS | 55.0% | |
| GGGTTCAGAATTGACGCTGG+TGG | - | chr1.1:66019184-66019203 | MS.gene68457:CDS | 55.0% | |
| GTGACGTGGGAGAAAGTTGG+TGG | + | chr1.1:66018995-66019014 | None:intergenic | 55.0% | |
| TTCTCTTCCAGCCCAAGGGT+AGG | + | chr1.1:66019983-66020002 | None:intergenic | 55.0% | |
| ! | AGATACTAGTGGGCGTGAGG+TGG | - | chr1.1:66019519-66019538 | MS.gene68457:intron | 55.0% |
| ! | CAGTCATGGCCTTTTGCAGC+AGG | - | chr1.1:66019892-66019911 | MS.gene68457:intron | 55.0% |
| ! | CCCTTGGGCTGGAAGAGAAA+AGG | - | chr1.1:66019984-66020003 | MS.gene68457:intron | 55.0% |
| ! | GTGTAGCGGGAAAAGTGACG+TGG | + | chr1.1:66019009-66019028 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 66018958 | 66021602 | 66018958 | ID=MS.gene68457 |
| chr1.1 | mRNA | 66018958 | 66021602 | 66018958 | ID=MS.gene68457.t1;Parent=MS.gene68457 |
| chr1.1 | exon | 66021517 | 66021602 | 66021517 | ID=MS.gene68457.t1.exon1;Parent=MS.gene68457.t1 |
| chr1.1 | CDS | 66021517 | 66021602 | 66021517 | ID=cds.MS.gene68457.t1;Parent=MS.gene68457.t1 |
| chr1.1 | exon | 66021286 | 66021433 | 66021286 | ID=MS.gene68457.t1.exon2;Parent=MS.gene68457.t1 |
| chr1.1 | CDS | 66021286 | 66021433 | 66021286 | ID=cds.MS.gene68457.t1;Parent=MS.gene68457.t1 |
| chr1.1 | exon | 66020764 | 66020824 | 66020764 | ID=MS.gene68457.t1.exon3;Parent=MS.gene68457.t1 |
| chr1.1 | CDS | 66020764 | 66020824 | 66020764 | ID=cds.MS.gene68457.t1;Parent=MS.gene68457.t1 |
| chr1.1 | exon | 66020537 | 66020669 | 66020537 | ID=MS.gene68457.t1.exon4;Parent=MS.gene68457.t1 |
| chr1.1 | CDS | 66020537 | 66020669 | 66020537 | ID=cds.MS.gene68457.t1;Parent=MS.gene68457.t1 |
| chr1.1 | exon | 66020191 | 66020314 | 66020191 | ID=MS.gene68457.t1.exon5;Parent=MS.gene68457.t1 |
| chr1.1 | CDS | 66020191 | 66020314 | 66020191 | ID=cds.MS.gene68457.t1;Parent=MS.gene68457.t1 |
| chr1.1 | exon | 66019986 | 66020042 | 66019986 | ID=MS.gene68457.t1.exon6;Parent=MS.gene68457.t1 |
| chr1.1 | CDS | 66019986 | 66020042 | 66019986 | ID=cds.MS.gene68457.t1;Parent=MS.gene68457.t1 |
| chr1.1 | exon | 66019773 | 66019866 | 66019773 | ID=MS.gene68457.t1.exon7;Parent=MS.gene68457.t1 |
| chr1.1 | CDS | 66019773 | 66019866 | 66019773 | ID=cds.MS.gene68457.t1;Parent=MS.gene68457.t1 |
| chr1.1 | exon | 66019153 | 66019360 | 66019153 | ID=MS.gene68457.t1.exon8;Parent=MS.gene68457.t1 |
| chr1.1 | CDS | 66019153 | 66019360 | 66019153 | ID=cds.MS.gene68457.t1;Parent=MS.gene68457.t1 |
| chr1.1 | exon | 66018958 | 66019018 | 66018958 | ID=MS.gene68457.t1.exon9;Parent=MS.gene68457.t1 |
| chr1.1 | CDS | 66018958 | 66019018 | 66018958 | ID=cds.MS.gene68457.t1;Parent=MS.gene68457.t1 |
| Gene Sequence |
| Protein sequence |
