Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92777.t1 | XP_003623650.1 | 99.2 | 599 | 5 | 0 | 1 | 599 | 1 | 599 | 0.00E+00 | 1132.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92777.t1 | Q9C9Z1 | 77.6 | 589 | 129 | 3 | 13 | 599 | 32 | 619 | 1.1e-256 | 887.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92777.t1 | G7KY80 | 99.2 | 599 | 5 | 0 | 1 | 599 | 1 | 599 | 0.0e+00 | 1132.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene92777 | -0.809531 | 1.81E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene92777 | -0.801107 | 1.05E-48 | -1.69E-46 |
| MS.gene050380 | MS.gene92777 | 0.835671 | 1.46E-56 | -1.69E-46 |
| MS.gene051694 | MS.gene92777 | -0.801612 | 8.30E-49 | -1.69E-46 |
| MS.gene05234 | MS.gene92777 | 0.813628 | 2.33E-51 | -1.69E-46 |
| MS.gene053421 | MS.gene92777 | 0.857642 | 1.42E-62 | -1.69E-46 |
| MS.gene054595 | MS.gene92777 | -0.811279 | 7.58E-51 | -1.69E-46 |
| MS.gene055202 | MS.gene92777 | 0.8062 | 9.23E-50 | -1.69E-46 |
| MS.gene056040 | MS.gene92777 | -0.803372 | 3.60E-49 | -1.69E-46 |
| MS.gene056309 | MS.gene92777 | 0.840127 | 1.05E-57 | -1.69E-46 |
| MS.gene056550 | MS.gene92777 | 0.800032 | 1.74E-48 | -1.69E-46 |
| MS.gene056647 | MS.gene92777 | 0.829738 | 4.35E-55 | -1.69E-46 |
| MS.gene057173 | MS.gene92777 | 0.83274 | 7.95E-56 | -1.69E-46 |
| MS.gene057506 | MS.gene92777 | 0.802135 | 6.48E-49 | -1.69E-46 |
| MS.gene058170 | MS.gene92777 | 0.810972 | 8.84E-51 | -1.69E-46 |
| MS.gene058171 | MS.gene92777 | 0.8171 | 3.93E-52 | -1.69E-46 |
| MS.gene058173 | MS.gene92777 | 0.801447 | 8.97E-49 | -1.69E-46 |
| MS.gene058174 | MS.gene92777 | 0.807929 | 3.97E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene92777 | 0.810264 | 1.26E-50 | -1.69E-46 |
| MS.gene060187 | MS.gene92777 | 0.816767 | 4.67E-52 | -1.69E-46 |
| MS.gene060482 | MS.gene92777 | -0.800383 | 1.48E-48 | -1.69E-46 |
| MS.gene061226 | MS.gene92777 | 0.802983 | 4.33E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92777.t1 | MTR_7g074060 | 99.165 | 599 | 5 | 0 | 1 | 599 | 1 | 599 | 0.0 | 1185 |
| MS.gene92777.t1 | MTR_3g094870 | 94.488 | 127 | 7 | 0 | 59 | 185 | 4 | 130 | 9.41e-77 | 241 |
| MS.gene92777.t1 | MTR_2g098150 | 31.278 | 227 | 131 | 9 | 112 | 316 | 38 | 261 | 1.80e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92777.t1 | AT3G08650 | 78.646 | 576 | 120 | 3 | 26 | 599 | 45 | 619 | 0.0 | 880 |
| MS.gene92777.t1 | AT3G08650 | 78.646 | 576 | 120 | 3 | 26 | 599 | 21 | 595 | 0.0 | 879 |
Find 156 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAAAGTTGTTCTTGTTAT+TGG | 0.087324 | 7.4:-30912857 | MS.gene92777:CDS |
| TACCCTTTCTGTAGCATTTA+TGG | 0.143650 | 7.4:-30911220 | MS.gene92777:CDS |
| AGCTGCCATAATTGGATTTA+TGG | 0.159832 | 7.4:-30910421 | MS.gene92777:CDS |
| CTTGCAGCAGCTGCCATAAT+TGG | 0.186600 | 7.4:-30910429 | MS.gene92777:CDS |
| ATAATGACTCTCCATTCTTT+TGG | 0.232487 | 7.4:-30912833 | MS.gene92777:CDS |
| CTTTATTTGGTTATGTAAAA+AGG | 0.234166 | 7.4:-30913383 | MS.gene92777:intron |
| AGGAGTATGGTTCTGGAAGC+TGG | 0.254592 | 7.4:-30913435 | MS.gene92777:CDS |
| TGCGGTATTGCCTTCGTTCT+TGG | 0.263021 | 7.4:-30910831 | MS.gene92777:CDS |
| GTAAGTATGTTGGATTTAAA+AGG | 0.263659 | 7.4:-30912890 | MS.gene92777:CDS |
| TAGCTGGTGGAGTCTTTATT+TGG | 0.264943 | 7.4:-30913396 | MS.gene92777:CDS |
| GCTGTGGCCAGCTGCATATT+TGG | 0.269968 | 7.4:-30910477 | MS.gene92777:CDS |
| TCTGGAAGCTGGGTTGTTAC+TGG | 0.271135 | 7.4:-30913424 | MS.gene92777:CDS |
| CTCTTGAGCTTTCTTGTAAT+CGG | 0.289711 | 7.4:-30913778 | MS.gene92777:CDS |
| CCTAACCTTAGCTTCAGATT+TGG | 0.295330 | 7.4:+30913820 | None:intergenic |
| ATGGCAGCTGCTACTGGTTT+AGG | 0.298859 | 7.4:-30913568 | MS.gene92777:CDS |
| TTTCAGTTTCTTGAGCAATA+TGG | 0.304516 | 7.4:-30912917 | MS.gene92777:intron |
| GGGGTTGGGGTCTCATTTGC+TGG | 0.309129 | 7.4:-30912800 | MS.gene92777:CDS |
| GTCTCATCTCTTCTTGCATT+GGG | 0.316278 | 7.4:-30910756 | MS.gene92777:CDS |
| GTCTCATTTGCTGGCTCAAA+GGG | 0.317244 | 7.4:-30912791 | MS.gene92777:CDS |
| TTGCTGCTGGATGCATGATT+TGG | 0.319687 | 7.4:-30911651 | MS.gene92777:CDS |
| CGGGCCCATAAATCCAATTA+TGG | 0.328236 | 7.4:+30910416 | None:intergenic |
| TAAAAGTTGAGAATGGTAAT+AGG | 0.331114 | 7.4:-30913645 | MS.gene92777:CDS |
| TGTCTCATCTCTTCTTGCAT+TGG | 0.343982 | 7.4:-30910757 | MS.gene92777:CDS |
| AATTAAAAGAGCACTTAGTT+TGG | 0.351805 | 7.4:-30910292 | MS.gene92777:CDS |
| AGCACCTGTGGTCTTATTAT+AGG | 0.368872 | 7.4:-30910258 | MS.gene92777:CDS |
| ATAGCTCCAATTGCTGATAT+CGG | 0.378354 | 7.4:+30910396 | None:intergenic |
| GAGCACTTAGTTTGGATAAA+CGG | 0.380437 | 7.4:-30910284 | MS.gene92777:CDS |
| GAAGGGCAGGAGTATGGTTC+TGG | 0.381179 | 7.4:-30913442 | MS.gene92777:CDS |
| GAGCTTGATCCGCAATGGGC+TGG | 0.382367 | 7.4:-30913523 | MS.gene92777:CDS |
| ATACACCGGAAGAAGATATA+TGG | 0.383455 | 7.4:+30910721 | None:intergenic |
| CAGTGATTGTAGGTAAGTTA+TGG | 0.386615 | 7.4:+30910667 | None:intergenic |
| TTGATCCATATATCTTCTTC+CGG | 0.388163 | 7.4:-30910726 | MS.gene92777:CDS |
| GCTGCCATAATTGGATTTAT+GGG | 0.389852 | 7.4:-30910420 | MS.gene92777:CDS |
| ATACAGGAAGGGCAGGAGTA+TGG | 0.390411 | 7.4:-30913448 | MS.gene92777:CDS |
| ATGTCTAACATTCACTAGAT+TGG | 0.390556 | 7.4:-30910217 | MS.gene92777:CDS |
| TTCTGTACGGGATTTGCTGC+TGG | 0.391242 | 7.4:-30911664 | MS.gene92777:CDS |
| CTCCACAGAATGCAATGTTA+TGG | 0.395778 | 7.4:-30912673 | MS.gene92777:CDS |
| AGCTTGATCCGCAATGGGCT+GGG | 0.400316 | 7.4:-30913522 | MS.gene92777:CDS |
| AGTGCTTCCTGATGCATTCA+AGG | 0.402471 | 7.4:-30911614 | MS.gene92777:intron |
| TAGTGGTCTTGATCACATAA+TGG | 0.420972 | 7.4:-30910355 | MS.gene92777:CDS |
| GGTCTCATTTGCTGGCTCAA+AGG | 0.423135 | 7.4:-30912792 | MS.gene92777:CDS |
| TAAATAACCTTGAATGCATC+AGG | 0.423338 | 7.4:+30911607 | None:intergenic |
| TCTTAGGCACGCTCTTCTCA+TGG | 0.432381 | 7.4:-30910862 | MS.gene92777:CDS |
| GGTGGATTAATTCCTAGCTT+TGG | 0.432612 | 7.4:-30910321 | MS.gene92777:CDS |
| TTGGCGATGGCAGCTGCTAC+TGG | 0.436321 | 7.4:-30913574 | MS.gene92777:CDS |
| TGCAGCTCTGAGGATGCATC+TGG | 0.442536 | 7.4:-30910963 | MS.gene92777:intron |
| AGTGATTGTAGGTAAGTTAT+GGG | 0.446155 | 7.4:+30910668 | None:intergenic |
| AGTTCTTTAAAAGTTGAGAA+TGG | 0.450738 | 7.4:-30913652 | MS.gene92777:CDS |
| AAACAATGCAACCGTTGAAA+CGG | 0.451244 | 7.4:+30913600 | None:intergenic |
| TTGCCTTCGTTCTTGGTGCA+TGG | 0.458829 | 7.4:-30910824 | MS.gene92777:CDS |
| CGACCAAGTCCATATGCCTT+TGG | 0.459596 | 7.4:+30910546 | None:intergenic |
| GTGGCTGCACCAAAGGCATA+TGG | 0.463802 | 7.4:-30910555 | MS.gene92777:CDS |
| CTCAGTGGTATTGATTATAG+TGG | 0.464567 | 7.4:-30910372 | MS.gene92777:CDS |
| TGTAGAGCTTGATCCGCAAT+GGG | 0.469535 | 7.4:-30913527 | MS.gene92777:CDS |
| TCAAGGCTTGTTGGTAACCT+TGG | 0.470069 | 7.4:-30912762 | MS.gene92777:CDS |
| ATGGGCCCGATATCAGCAAT+TGG | 0.476972 | 7.4:-30910402 | MS.gene92777:CDS |
| TTGTAGAGCTTGATCCGCAA+TGG | 0.481128 | 7.4:-30913528 | MS.gene92777:CDS |
| GGCCTAGGCCCATCACTTGG+CGG | 0.481669 | 7.4:-30910918 | MS.gene92777:CDS |
| TATTTGGAGCCACCGATAGC+TGG | 0.485678 | 7.4:-30910461 | MS.gene92777:CDS |
| GCACCAAAGGCATATGGACT+TGG | 0.486992 | 7.4:-30910549 | MS.gene92777:CDS |
| TGTAGGTAAGTTATGGGCTG+AGG | 0.487766 | 7.4:+30910674 | None:intergenic |
| CAAGTTTCTTCCATTCTGTA+CGG | 0.489947 | 7.4:-30911677 | MS.gene92777:CDS |
| CCGATCCCTCTCCAAAAGAA+TGG | 0.491955 | 7.4:+30912822 | None:intergenic |
| TCGCCTTATCTAACAGCCTC+TGG | 0.492142 | 7.4:+30910162 | None:intergenic |
| GTGGCTGAAGGACTTGCATT+GGG | 0.492352 | 7.4:-30910579 | MS.gene92777:CDS |
| TCTGGTGCAGAATTACAGTA+TGG | 0.492393 | 7.4:+30910180 | None:intergenic |
| ATAGGAAGCCTCGCCTTCAC+AGG | 0.495192 | 7.4:-30911256 | MS.gene92777:intron |
| TTAATTACATTGCCAAAGCT+AGG | 0.496921 | 7.4:+30910309 | None:intergenic |
| TAGCTCCAATTGCTGATATC+GGG | 0.497067 | 7.4:+30910397 | None:intergenic |
| TGAGCATGGTGTTGGCATCA+AGG | 0.497526 | 7.4:-30912703 | MS.gene92777:CDS |
| AAGTTTCTTCCATTCTGTAC+GGG | 0.498814 | 7.4:-30911676 | MS.gene92777:CDS |
| CAATGGGCTGGGTTGTGTAA+TGG | 0.500463 | 7.4:-30913511 | MS.gene92777:CDS |
| GGTAAGAGCTGCTCCACATA+AGG | 0.501511 | 7.4:-30913713 | MS.gene92777:CDS |
| AGTGAATGTTAGACATAAAG+TGG | 0.501629 | 7.4:+30910224 | None:intergenic |
| GTAGGATCCACTGTAATTGA+TGG | 0.506583 | 7.4:-30913688 | MS.gene92777:CDS |
| ATATGGACTTGGTCGTCATA+TGG | 0.508728 | 7.4:-30910538 | MS.gene92777:CDS |
| GGAGTATGGTTCTGGAAGCT+GGG | 0.514054 | 7.4:-30913434 | MS.gene92777:CDS |
| CCAAATCTGAAGCTAAGGTT+AGG | 0.516753 | 7.4:-30913820 | MS.gene92777:CDS |
| CTTCCATAAATGCTACAGAA+AGG | 0.519507 | 7.4:+30911217 | None:intergenic |
| TTCCATAAATGCTACAGAAA+GGG | 0.520128 | 7.4:+30911218 | None:intergenic |
| GCACCAGAGGCTGTTAGATA+AGG | 0.525011 | 7.4:-30910165 | None:intergenic |
| ATTGGGAGTGGCTGCACCAA+AGG | 0.525122 | 7.4:-30910562 | MS.gene92777:CDS |
| GAGCATGGTGTTGGCATCAA+GGG | 0.525623 | 7.4:-30912702 | MS.gene92777:CDS |
| TCTTCCTCGTGGTGCAGCTG+TGG | 0.525815 | 7.4:-30910493 | MS.gene92777:CDS |
| TGAAGGACTTGCATTGGGAG+TGG | 0.528124 | 7.4:-30910574 | MS.gene92777:CDS |
| CTTCTCATGGGCATTGCTTG+CGG | 0.528380 | 7.4:-30910849 | MS.gene92777:CDS |
| CACATGATATGAATGATTGA+AGG | 0.531127 | 7.4:+30910622 | None:intergenic |
| TTCCGCCAAGTGATGGGCCT+AGG | 0.532065 | 7.4:+30910916 | None:intergenic |
| TGACTTGATACAGGAAGGGC+AGG | 0.532178 | 7.4:-30913455 | MS.gene92777:CDS |
| AGCGGGAAGCCAGTGATTGT+AGG | 0.532924 | 7.4:+30910657 | None:intergenic |
| GAGAATGGTAATAGGAAGAG+CGG | 0.536405 | 7.4:-30913637 | MS.gene92777:CDS |
| CTCCATAACATTGCATTCTG+TGG | 0.536870 | 7.4:+30912671 | None:intergenic |
| GGAAGACCGTGTAAAGAGAC+TGG | 0.537388 | 7.4:+30910510 | None:intergenic |
| GAAGACAAAAGAAGCTGCAC+AGG | 0.537512 | 7.4:+30910798 | None:intergenic |
| GTTGGTAACCTTGGCTATTG+CGG | 0.538871 | 7.4:-30912753 | MS.gene92777:CDS |
| TTTAGCTGTGAGCATGGTGT+TGG | 0.539205 | 7.4:-30912711 | MS.gene92777:CDS |
| TGTAATTACATCTTTACCGC+AGG | 0.539461 | 7.4:-30912648 | MS.gene92777:intron |
| TTTGGCCTAGGCCCATCACT+TGG | 0.541861 | 7.4:-30910921 | MS.gene92777:CDS |
| ATATGGAGAAGTAAGTATGT+TGG | 0.542519 | 7.4:-30912900 | MS.gene92777:CDS |
| CAGTAGAGTTTCCGTTTCAA+CGG | 0.542538 | 7.4:-30913611 | MS.gene92777:CDS |
| TTGTGTAATGGAATGGCTGC+AGG | 0.544030 | 7.4:-30913499 | MS.gene92777:CDS |
| TGGCTCCAAATCTGAAGCTA+AGG | 0.544402 | 7.4:-30913825 | MS.gene92777:CDS |
| TGTGGCTGAAGGACTTGCAT+TGG | 0.546877 | 7.4:-30910580 | MS.gene92777:CDS |
| GCTCTTCACGCTGTGGCTGA+AGG | 0.548522 | 7.4:-30910591 | MS.gene92777:CDS |
| AAAGAAGGAACAGCCACGAT+TGG | 0.549142 | 7.4:+30911721 | None:intergenic |
| GCAGCAAATCCCGTACAGAA+TGG | 0.550186 | 7.4:+30911667 | None:intergenic |
| CTTAGGCACGCTCTTCTCAT+GGG | 0.550639 | 7.4:-30910861 | MS.gene92777:CDS |
| CATAACTTACCTACAATCAC+TGG | 0.552503 | 7.4:-30910666 | MS.gene92777:CDS |
| TCAAGCTCTACAAAGAAGAA+TGG | 0.553530 | 7.4:+30913538 | None:intergenic |
| TGTTCCTTCTTTCATTTGTG+CGG | 0.554544 | 7.4:-30911710 | MS.gene92777:CDS |
| GGCTGGGTTGTGTAATGGAA+TGG | 0.555366 | 7.4:-30913506 | MS.gene92777:CDS |
| TGCTGGATGCATGATTTGGA+TGG | 0.556768 | 7.4:-30911647 | MS.gene92777:CDS |
| TGCATTGTTTACGTTGGCGA+TGG | 0.562591 | 7.4:-30913587 | MS.gene92777:CDS |
| GCAGCTGATGCAACCTGTGA+AGG | 0.563032 | 7.4:+30911243 | None:intergenic |
| AACGGTTGCATTGTTTACGT+TGG | 0.566111 | 7.4:-30913593 | MS.gene92777:CDS |
| ATGCTCACAGCTAAACCCTC+TGG | 0.570653 | 7.4:+30912719 | None:intergenic |
| GGTGGCTCCAAATATGCAGC+TGG | 0.570807 | 7.4:+30910470 | None:intergenic |
| GTCCTTCCAGTCTCTTTACA+CGG | 0.572688 | 7.4:-30910516 | MS.gene92777:CDS |
| GCTGCTCCACATAAGGATGT+AGG | 0.573371 | 7.4:-30913706 | MS.gene92777:CDS |
| GAAGGGTGTGAATACTGAGC+GGG | 0.577422 | 7.4:+30910640 | None:intergenic |
| AATGCAAGAAGAGATGAGAC+AGG | 0.577585 | 7.4:+30910759 | None:intergenic |
| GGAGCCACCGATAGCTGGCA+TGG | 0.580407 | 7.4:-30910456 | MS.gene92777:CDS |
| AAGAGAACCATGCCAGCTAT+CGG | 0.582826 | 7.4:+30910449 | None:intergenic |
| GCATCCGCACAAATGAAAGA+AGG | 0.583360 | 7.4:+30911706 | None:intergenic |
| GTGGATCCTACATCCTTATG+TGG | 0.589757 | 7.4:+30913700 | None:intergenic |
| TAGAGGGATTATGTTGTACA+TGG | 0.591598 | 7.4:-30913845 | None:intergenic |
| AATGGCTGCAGGTGTTATGT+TGG | 0.591736 | 7.4:-30913488 | MS.gene92777:CDS |
| AATACTAATGCAGCCAATCG+TGG | 0.594837 | 7.4:-30911734 | MS.gene92777:intron |
| TGATGCAACCTGTGAAGGCG+AGG | 0.598760 | 7.4:+30911248 | None:intergenic |
| AGAGGGTTTAGCTGTGAGCA+TGG | 0.604671 | 7.4:-30912717 | MS.gene92777:CDS |
| GACCGTGTAAAGAGACTGGA+AGG | 0.605394 | 7.4:+30910514 | None:intergenic |
| AATACCTATAATAAGACCAC+AGG | 0.614809 | 7.4:+30910254 | None:intergenic |
| TCCACTGTAATTGATGGCAC+TGG | 0.615623 | 7.4:-30913682 | MS.gene92777:CDS |
| ATAATGGTTCTTGCATGTGG+TGG | 0.618663 | 7.4:-30910339 | MS.gene92777:CDS |
| CTTCAATCATTCATATCATG+TGG | 0.620217 | 7.4:-30910621 | MS.gene92777:CDS |
| CACATAATGGTTCTTGCATG+TGG | 0.629235 | 7.4:-30910342 | MS.gene92777:CDS |
| CTGGCCACAGCTGCACCACG+AGG | 0.631824 | 7.4:+30910489 | None:intergenic |
| ACATGATATGAATGATTGAA+GGG | 0.632683 | 7.4:+30910623 | None:intergenic |
| TGCAGTAGCTCTTCACGCTG+TGG | 0.632820 | 7.4:-30910598 | MS.gene92777:CDS |
| AGCATGGTGTTGGCATCAAG+GGG | 0.637745 | 7.4:-30912701 | MS.gene92777:CDS |
| GTTATGCACCGCAATAGCCA+AGG | 0.639108 | 7.4:+30912745 | None:intergenic |
| GATAAACGGAAGAGCACCTG+TGG | 0.643902 | 7.4:-30910270 | MS.gene92777:CDS |
| ATACTGTAATTCTGCACCAG+AGG | 0.652513 | 7.4:-30910178 | MS.gene92777:CDS |
| TCTTTACACGGTCTTCCTCG+TGG | 0.653399 | 7.4:-30910504 | MS.gene92777:CDS |
| AGTTGCAAGCTTCAATACAC+CGG | 0.654091 | 7.4:+30910707 | None:intergenic |
| ATGACTGAAATTCTGAAACA+AGG | 0.654534 | 7.4:+30911185 | None:intergenic |
| ATTTCGTTGTTGCAGCTCTG+AGG | 0.654684 | 7.4:-30910973 | MS.gene92777:intron |
| ACCAGTGCCATCAATTACAG+TGG | 0.655116 | 7.4:+30913681 | None:intergenic |
| GCAATTGGAGCTATTCTCAG+TGG | 0.655795 | 7.4:-30910387 | MS.gene92777:CDS |
| TGCGGTGCATAACATACCAG+AGG | 0.663166 | 7.4:-30912735 | MS.gene92777:CDS |
| GCGGTGCATAACATACCAGA+GGG | 0.663341 | 7.4:-30912734 | MS.gene92777:CDS |
| AGAACCATGCCAGCTATCGG+TGG | 0.671442 | 7.4:+30910452 | None:intergenic |
| TCGCCATGCACCAAGAACGA+AGG | 0.671991 | 7.4:+30910821 | None:intergenic |
| GCTCAAGAGTATAAACAACA+AGG | 0.695340 | 7.4:+30913792 | None:intergenic |
| TTACACAACCCAGCCCATTG+CGG | 0.732786 | 7.4:+30913514 | None:intergenic |
| TGAAGGGTGTGAATACTGAG+CGG | 0.801336 | 7.4:+30910639 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAATATATATATATATGTT+AGG | - | chr7.4:30911750-30911769 | MS.gene92777:intron | 10.0% |
| !! | ACATATATATATATATTGAC+TGG | + | chr7.4:30911749-30911768 | None:intergenic | 15.0% |
| !! | GTATGAATAATGTTATAATT+GGG | - | chr7.4:30911534-30911553 | MS.gene92777:intron | 15.0% |
| !! | TAGGATGTTAAAATTTAATT+AGG | + | chr7.4:30911385-30911404 | None:intergenic | 15.0% |
| !! | TAGTTCAATTAGTATTATTT+GGG | - | chr7.4:30911612-30911631 | MS.gene92777:intron | 15.0% |
| !! | TGTATGAATAATGTTATAAT+TGG | - | chr7.4:30911533-30911552 | MS.gene92777:intron | 15.0% |
| !! | TTAGTTCAATTAGTATTATT+TGG | - | chr7.4:30911611-30911630 | MS.gene92777:intron | 15.0% |
| !!! | ACACTATTTAGTTTTATAAT+TGG | - | chr7.4:30911574-30911593 | MS.gene92777:intron | 15.0% |
| !!! | CACTATTTAGTTTTATAATT+GGG | - | chr7.4:30911575-30911594 | MS.gene92777:intron | 15.0% |
| !!! | TTTTCATTTTCTATGTTTTT+GGG | - | chr7.4:30910973-30910992 | MS.gene92777:intron | 15.0% |
| !! | AGGTTTATATAAAGTCAAAA+AGG | + | chr7.4:30911460-30911479 | None:intergenic | 20.0% |
| !! | ATAAATAAGTTCTATATCCT+TGG | - | chr7.4:30910781-30910800 | MS.gene92777:CDS | 20.0% |
| !! | CAAAAACATAGAAAATGAAA+AGG | + | chr7.4:30910974-30910993 | None:intergenic | 20.0% |
| !! | CTTAAAGATTAAGCTATTAA+AGG | - | chr7.4:30912549-30912568 | MS.gene92777:intron | 20.0% |
| !! | CTTTAATAGCTTAATCTTTA+AGG | + | chr7.4:30912551-30912570 | None:intergenic | 20.0% |
| !! | GACAATTTCATAAAAGTTAA+AGG | + | chr7.4:30912683-30912702 | None:intergenic | 20.0% |
| !! | GCTTTGGTATAAAATTATAA+AGG | + | chr7.4:30912421-30912440 | None:intergenic | 20.0% |
| !!! | AAATGAAGTTTTGCATAATA+AGG | - | chr7.4:30910268-30910287 | MS.gene92777:CDS | 20.0% |
| !!! | ATCATTTTCTCTTTTCTTTT+GGG | - | chr7.4:30912721-30912740 | MS.gene92777:CDS | 20.0% |
| !!! | ATGCCTAATATAGTTTTTTA+TGG | - | chr7.4:30911781-30911800 | MS.gene92777:intron | 20.0% |
| !!! | CTTTATTTGGTTATGTAAAA+AGG | - | chr7.4:30910619-30910638 | MS.gene92777:CDS | 20.0% |
| !!! | CTTTTCATTTTCTATGTTTT+TGG | - | chr7.4:30910972-30910991 | MS.gene92777:intron | 20.0% |
| !!! | TATCATTTTCTCTTTTCTTT+TGG | - | chr7.4:30912720-30912739 | MS.gene92777:CDS | 20.0% |
| !!! | TGCCTAATATAGTTTTTTAT+GGG | - | chr7.4:30911782-30911801 | MS.gene92777:intron | 20.0% |
| !!! | TTCTTTGTTTCATTACTTTT+TGG | - | chr7.4:30913063-30913082 | MS.gene92777:intron | 20.0% |
| ! | AACAACGAAATCACAATTTA+GGG | + | chr7.4:30913020-30913039 | None:intergenic | 25.0% |
| ! | AAGATTAAGCTATTAAAGGA+AGG | - | chr7.4:30912553-30912572 | MS.gene92777:intron | 25.0% |
| ! | AATTAGTATTATTTGGGAGT+GGG | - | chr7.4:30911618-30911637 | MS.gene92777:CDS | 25.0% |
| ! | ACAACATATCATAATAGCTT+TGG | + | chr7.4:30912437-30912456 | None:intergenic | 25.0% |
| ! | ACATGATATGAATGATTGAA+GGG | + | chr7.4:30913382-30913401 | None:intergenic | 25.0% |
| ! | ACTGATTAACAGTCTTAATT+AGG | + | chr7.4:30912036-30912055 | None:intergenic | 25.0% |
| ! | AGATTAAGCTATTAAAGGAA+GGG | - | chr7.4:30912554-30912573 | MS.gene92777:intron | 25.0% |
| ! | ATAACTAGCAGATATAAGAA+TGG | + | chr7.4:30911704-30911723 | None:intergenic | 25.0% |
| ! | ATTAAGAATAAGAGAGTTAG+AGG | + | chr7.4:30912251-30912270 | None:intergenic | 25.0% |
| ! | ATTTAATTAGGATATACCTG+CGG | + | chr7.4:30911373-30911392 | None:intergenic | 25.0% |
| ! | CACCCATAAAAAACTATATT+AGG | + | chr7.4:30911787-30911806 | None:intergenic | 25.0% |
| ! | GAACAGAAGACAATATAAAA+AGG | + | chr7.4:30912600-30912619 | None:intergenic | 25.0% |
| ! | GTAAGTATGTTGGATTTAAA+AGG | - | chr7.4:30911112-30911131 | MS.gene92777:intron | 25.0% |
| ! | TAAAAGTTGAGAATGGTAAT+AGG | - | chr7.4:30910357-30910376 | MS.gene92777:CDS | 25.0% |
| ! | TTATATTGTCTTCTGTTCAT+GGG | - | chr7.4:30912602-30912621 | MS.gene92777:intron | 25.0% |
| ! | TTGTGTAATTCTTACTTTAC+TGG | - | chr7.4:30911007-30911026 | MS.gene92777:intron | 25.0% |
| ! | TTTATATTGTCTTCTGTTCA+TGG | - | chr7.4:30912601-30912620 | MS.gene92777:intron | 25.0% |
| ! | TTTCTTTCCTGAATTAAACA+AGG | + | chr7.4:30912146-30912165 | None:intergenic | 25.0% |
| !! | AATTTTCTTCTGAACAATGT+AGG | + | chr7.4:30911404-30911423 | None:intergenic | 25.0% |
| !! | ACAAAAGTTGTTCTTGTTAT+TGG | - | chr7.4:30911145-30911164 | MS.gene92777:intron | 25.0% |
| !! | AGTTCTTTAAAAGTTGAGAA+TGG | - | chr7.4:30910350-30910369 | MS.gene92777:CDS | 25.0% |
| !! | ATTTTATCTTTAAGCTAGTC+TGG | - | chr7.4:30912010-30912029 | MS.gene92777:intron | 25.0% |
| !! | CTTCTTTTGTCTTCAAAAAT+GGG | - | chr7.4:30913213-30913232 | MS.gene92777:intron | 25.0% |
| !! | GTGTGTACATTTTGTATTAT+CGG | - | chr7.4:30912864-30912883 | MS.gene92777:CDS | 25.0% |
| !!! | AATTAAAAGAGCACTTAGTT+TGG | - | chr7.4:30913710-30913729 | MS.gene92777:CDS | 25.0% |
| !!! | ATCGGATAAATTTTGTTGTT+TGG | - | chr7.4:30912882-30912901 | MS.gene92777:CDS | 25.0% |
| !!! | TCGGATAAATTTTGTTGTTT+GGG | - | chr7.4:30912883-30912902 | MS.gene92777:CDS | 25.0% |
| !!! | TTGTTTTCCTTGTTTAATTC+AGG | - | chr7.4:30912136-30912155 | MS.gene92777:intron | 25.0% |
| AATACCTATAATAAGACCAC+AGG | + | chr7.4:30913751-30913770 | None:intergenic | 30.0% | |
| AATTCTTACTTTACTGGTAG+AGG | - | chr7.4:30911013-30911032 | MS.gene92777:intron | 30.0% | |
| AGTGAATGTTAGACATAAAG+TGG | + | chr7.4:30913781-30913800 | None:intergenic | 30.0% | |
| AGTGATTGTAGGTAAGTTAT+GGG | + | chr7.4:30913337-30913356 | None:intergenic | 30.0% | |
| ATATGGAGAAGTAAGTATGT+TGG | - | chr7.4:30911102-30911121 | MS.gene92777:intron | 30.0% | |
| ATGAACATCAAAATCGAGAA+TGG | - | chr7.4:30910825-30910844 | MS.gene92777:CDS | 30.0% | |
| ATGTCTAACATTCACTAGAT+TGG | - | chr7.4:30913785-30913804 | MS.gene92777:CDS | 30.0% | |
| ATTAGTATTATTTGGGAGTG+GGG | - | chr7.4:30911619-30911638 | MS.gene92777:CDS | 30.0% | |
| CAACAACGAAATCACAATTT+AGG | + | chr7.4:30913021-30913040 | None:intergenic | 30.0% | |
| CAATTAGTATTATTTGGGAG+TGG | - | chr7.4:30911617-30911636 | MS.gene92777:CDS | 30.0% | |
| CACATGATATGAATGATTGA+AGG | + | chr7.4:30913383-30913402 | None:intergenic | 30.0% | |
| CTTCAATCATTCATATCATG+TGG | - | chr7.4:30913381-30913400 | MS.gene92777:intron | 30.0% | |
| GATTAAGCTATTAAAGGAAG+GGG | - | chr7.4:30912555-30912574 | MS.gene92777:intron | 30.0% | |
| TAAATAACCTTGAATGCATC+AGG | + | chr7.4:30912398-30912417 | None:intergenic | 30.0% | |
| TAGCAGATATAAGAATGGTT+TGG | + | chr7.4:30911699-30911718 | None:intergenic | 30.0% | |
| TGTTATAATTGGGTAGTTTG+TGG | - | chr7.4:30911544-30911563 | MS.gene92777:intron | 30.0% | |
| TTAATTACATTGCCAAAGCT+AGG | + | chr7.4:30913696-30913715 | None:intergenic | 30.0% | |
| TTACTAGGTGAAACAATTCT+TGG | + | chr7.4:30911882-30911901 | None:intergenic | 30.0% | |
| TTCCATAAATGCTACAGAAA+GGG | + | chr7.4:30912787-30912806 | None:intergenic | 30.0% | |
| TTGATCCATATATCTTCTTC+CGG | - | chr7.4:30913276-30913295 | MS.gene92777:intron | 30.0% | |
| TTTCAAATTTCAGCAGAACA+TGG | + | chr7.4:30912939-30912958 | None:intergenic | 30.0% | |
| TTTCAGTTTCTTGAGCAATA+TGG | - | chr7.4:30911085-30911104 | MS.gene92777:intron | 30.0% | |
| ! | ATAATGACTCTCCATTCTTT+TGG | - | chr7.4:30911169-30911188 | MS.gene92777:intron | 30.0% |
| ! | GCTTCTTTTGTCTTCAAAAA+TGG | - | chr7.4:30913212-30913231 | MS.gene92777:intron | 30.0% |
| ! | TAGCTTAATCTTTAAGGACT+TGG | + | chr7.4:30912545-30912564 | None:intergenic | 30.0% |
| !! | ATGACTGAAATTCTGAAACA+AGG | + | chr7.4:30912820-30912839 | None:intergenic | 30.0% |
| !! | CAGAAGAAAATTGTTGACTT+TGG | - | chr7.4:30911412-30911431 | MS.gene92777:intron | 30.0% |
| !!! | TCTCTTTTCTTTTGGGTTAT+AGG | - | chr7.4:30912728-30912747 | MS.gene92777:CDS | 30.0% |
| AAACAATGCAACCGTTGAAA+CGG | + | chr7.4:30910405-30910424 | None:intergenic | 35.0% | |
| AAATGCAGGTAACTACAGTA+AGG | + | chr7.4:30910685-30910704 | None:intergenic | 35.0% | |
| AAGTTTCTTCCATTCTGTAC+GGG | - | chr7.4:30912326-30912345 | MS.gene92777:intron | 35.0% | |
| ACCTATATCAACCAAGTGAT+TGG | + | chr7.4:30911964-30911983 | None:intergenic | 35.0% | |
| ACTACAGTAAGGAGAAAGAA+TGG | + | chr7.4:30910674-30910693 | None:intergenic | 35.0% | |
| AGCTGCCATAATTGGATTTA+TGG | - | chr7.4:30913581-30913600 | MS.gene92777:CDS | 35.0% | |
| ATACACCGGAAGAAGATATA+TGG | + | chr7.4:30913284-30913303 | None:intergenic | 35.0% | |
| ATAGCATAGAAATGTATGCG+TGG | + | chr7.4:30912653-30912672 | None:intergenic | 35.0% | |
| ATAGCTCCAATTGCTGATAT+CGG | + | chr7.4:30913609-30913628 | None:intergenic | 35.0% | |
| ATTTCCTACCAATGTACTCT+AGG | - | chr7.4:30910895-30910914 | MS.gene92777:CDS | 35.0% | |
| CAAGTTTCTTCCATTCTGTA+CGG | - | chr7.4:30912325-30912344 | MS.gene92777:intron | 35.0% | |
| CAGTGATTGTAGGTAAGTTA+TGG | + | chr7.4:30913338-30913357 | None:intergenic | 35.0% | |
| CATAACTTACCTACAATCAC+TGG | - | chr7.4:30913336-30913355 | MS.gene92777:intron | 35.0% | |
| CCTATATCAACCAAGTGATT+GGG | + | chr7.4:30911963-30911982 | None:intergenic | 35.0% | |
| CTCTTGAGCTTTCTTGTAAT+CGG | - | chr7.4:30910224-30910243 | MS.gene92777:CDS | 35.0% | |
| CTTCCATAAATGCTACAGAA+AGG | + | chr7.4:30912788-30912807 | None:intergenic | 35.0% | |
| GCTGCCATAATTGGATTTAT+GGG | - | chr7.4:30913582-30913601 | MS.gene92777:CDS | 35.0% | |
| TACCCTTTCTGTAGCATTTA+TGG | - | chr7.4:30912782-30912801 | MS.gene92777:CDS | 35.0% | |
| TCAAGCTCTACAAAGAAGAA+TGG | + | chr7.4:30910467-30910486 | None:intergenic | 35.0% | |
| TGTAATTACATCTTTACCGC+AGG | - | chr7.4:30911354-30911373 | MS.gene92777:intron | 35.0% | |
| TGTTCCTTCTTTCATTTGTG+CGG | - | chr7.4:30912292-30912311 | MS.gene92777:intron | 35.0% | |
| TTAGTATTATTTGGGAGTGG+GGG | - | chr7.4:30911620-30911639 | MS.gene92777:CDS | 35.0% | |
| TTTACACCTCGAAAATGTTG+TGG | + | chr7.4:30912467-30912486 | None:intergenic | 35.0% | |
| TTTCACCTAGTAATCGAACT+CGG | - | chr7.4:30911889-30911908 | MS.gene92777:intron | 35.0% | |
| ! | AACAACTAGAAGCGTGTATA+AGG | + | chr7.4:30912106-30912125 | None:intergenic | 35.0% |
| ! | CAGATATAAGAATGGTTTGG+TGG | + | chr7.4:30911696-30911715 | None:intergenic | 35.0% |
| ! | GAGCACTTAGTTTGGATAAA+CGG | - | chr7.4:30913718-30913737 | MS.gene92777:CDS | 35.0% |
| ! | GCTCAAGAGTATAAACAACA+AGG | + | chr7.4:30910213-30910232 | None:intergenic | 35.0% |
| ! | TAGTGGTCTTGATCACATAA+TGG | - | chr7.4:30913647-30913666 | MS.gene92777:CDS | 35.0% |
| ! | TATACACGCTTCTAGTTGTT+CGG | - | chr7.4:30912106-30912125 | MS.gene92777:intron | 35.0% |
| ! | TGTTTACCACAACATTTTCG+AGG | - | chr7.4:30912458-30912477 | MS.gene92777:intron | 35.0% |
| ! | TTTTGACAAAAAGATCGCCA+AGG | + | chr7.4:30910801-30910820 | None:intergenic | 35.0% |
| !! | CTCAGTGGTATTGATTATAG+TGG | - | chr7.4:30913630-30913649 | MS.gene92777:CDS | 35.0% |
| !! | GTTGTTACTGGAATTTTAGC+TGG | - | chr7.4:30910590-30910609 | MS.gene92777:CDS | 35.0% |
| !! | TTGCTCTTGCTTTTCATCTT+AGG | - | chr7.4:30913124-30913143 | MS.gene92777:intron | 35.0% |
| !!! | AGTTTTGACTTGATACAGGA+AGG | - | chr7.4:30910542-30910561 | MS.gene92777:CDS | 35.0% |
| !!! | GTTTCATTACTTTTTGGCCT+AGG | - | chr7.4:30913069-30913088 | MS.gene92777:intron | 35.0% |
| !!! | GTTTTGACTTGATACAGGAA+GGG | - | chr7.4:30910543-30910562 | MS.gene92777:CDS | 35.0% |
| !!! | TGCAAGTTTTGACTTGATAC+AGG | - | chr7.4:30910538-30910557 | MS.gene92777:CDS | 35.0% |
| AACGGTTGCATTGTTTACGT+TGG | - | chr7.4:30910409-30910428 | MS.gene92777:CDS | 40.0% | |
| AATACTAATGCAGCCAATCG+TGG | - | chr7.4:30912268-30912287 | MS.gene92777:intron | 40.0% | |
| AATGCAAGAAGAGATGAGAC+AGG | + | chr7.4:30913246-30913265 | None:intergenic | 40.0% | |
| AGAAAAATTCCGCCAAGTGA+TGG | + | chr7.4:30913096-30913115 | None:intergenic | 40.0% | |
| AGTAAAGGAGTGGAGTGATA+AGG | + | chr7.4:30911661-30911680 | None:intergenic | 40.0% | |
| AGTTGCAAGCTTCAATACAC+CGG | + | chr7.4:30913298-30913317 | None:intergenic | 40.0% | |
| ATAATGGTTCTTGCATGTGG+TGG | - | chr7.4:30913663-30913682 | MS.gene92777:CDS | 40.0% | |
| ATACTGTAATTCTGCACCAG+AGG | - | chr7.4:30913824-30913843 | MS.gene92777:CDS | 40.0% | |
| CACATAATGGTTCTTGCATG+TGG | - | chr7.4:30913660-30913679 | MS.gene92777:CDS | 40.0% | |
| CAGTAGAGTTTCCGTTTCAA+CGG | - | chr7.4:30910391-30910410 | MS.gene92777:CDS | 40.0% | |
| CATTCCTAGAGTACATTGGT+AGG | + | chr7.4:30910902-30910921 | None:intergenic | 40.0% | |
| CCAACATTCCTAGAGTACAT+TGG | + | chr7.4:30910906-30910925 | None:intergenic | 40.0% | |
| CCTAACCTTAGCTTCAGATT+TGG | + | chr7.4:30910185-30910204 | None:intergenic | 40.0% | |
| CTATTAAAGGAAGGGGTGAT+TGG | - | chr7.4:30912562-30912581 | MS.gene92777:intron | 40.0% | |
| CTCCACAGAATGCAATGTTA+TGG | - | chr7.4:30911329-30911348 | MS.gene92777:intron | 40.0% | |
| CTCCATAACATTGCATTCTG+TGG | + | chr7.4:30911334-30911353 | None:intergenic | 40.0% | |
| GAAAAATTCCGCCAAGTGAT+GGG | + | chr7.4:30913095-30913114 | None:intergenic | 40.0% | |
| GAGAATGGTAATAGGAAGAG+CGG | - | chr7.4:30910365-30910384 | MS.gene92777:CDS | 40.0% | |
| GTAGGATCCACTGTAATTGA+TGG | - | chr7.4:30910314-30910333 | MS.gene92777:CDS | 40.0% | |
| GTCTCATCTCTTCTTGCATT+GGG | - | chr7.4:30913246-30913265 | MS.gene92777:intron | 40.0% | |
| TAGCTCCAATTGCTGATATC+GGG | + | chr7.4:30913608-30913627 | None:intergenic | 40.0% | |
| TAGCTGGTGGAGTCTTTATT+TGG | - | chr7.4:30910606-30910625 | MS.gene92777:CDS | 40.0% | |
| TCTGGTGCAGAATTACAGTA+TGG | + | chr7.4:30913825-30913844 | None:intergenic | 40.0% | |
| TGCGATAAAACAGCAAATGC+AGG | + | chr7.4:30910699-30910718 | None:intergenic | 40.0% | |
| TGGTTAATGAGCTTCACCAA+AGG | + | chr7.4:30911934-30911953 | None:intergenic | 40.0% | |
| TGTCTCATCTCTTCTTGCAT+TGG | - | chr7.4:30913245-30913264 | MS.gene92777:intron | 40.0% | |
| TTCACCTAGTAATCGAACTC+GGG | - | chr7.4:30911890-30911909 | MS.gene92777:intron | 40.0% | |
| TTTGGTCAGCATCACTTTGA+AGG | - | chr7.4:30911430-30911449 | MS.gene92777:intron | 40.0% | |
| ! | ATATGGACTTGGTCGTCATA+TGG | - | chr7.4:30913464-30913483 | MS.gene92777:CDS | 40.0% |
| ! | ATCACTTGGCGGAATTTTTC+TGG | - | chr7.4:30913095-30913114 | MS.gene92777:intron | 40.0% |
| ! | CCAAATCTGAAGCTAAGGTT+AGG | - | chr7.4:30910182-30910201 | MS.gene92777:CDS | 40.0% |
| ! | CCAATGTACTCTAGGAATGT+TGG | - | chr7.4:30910903-30910922 | MS.gene92777:CDS | 40.0% |
| ! | CCCAATCACTTGGTTGATAT+AGG | - | chr7.4:30911960-30911979 | MS.gene92777:intron | 40.0% |
| ! | CTTTTGTCTTGCATGTCTCT+TGG | - | chr7.4:30911061-30911080 | MS.gene92777:intron | 40.0% |
| !! | ACTCTCCATTCTTTTGGAGA+GGG | - | chr7.4:30911175-30911194 | MS.gene92777:intron | 40.0% |
| !! | AGCACCTGTGGTCTTATTAT+AGG | - | chr7.4:30913744-30913763 | MS.gene92777:CDS | 40.0% |
| !! | GGTGGATTAATTCCTAGCTT+TGG | - | chr7.4:30913681-30913700 | MS.gene92777:CDS | 40.0% |
| !! | GTTGTTTGGGTTTGTTGCTT+TGG | - | chr7.4:30912896-30912915 | MS.gene92777:CDS | 40.0% |
| !! | TAAGAATGGTTTGGTGGTTG+AGG | + | chr7.4:30911690-30911709 | None:intergenic | 40.0% |
| !!! | GTTACTGGAATTTTAGCTGG+TGG | - | chr7.4:30910593-30910612 | MS.gene92777:CDS | 40.0% |
| AAAGAAGGAACAGCCACGAT+TGG | + | chr7.4:30912284-30912303 | None:intergenic | 45.0% | |
| AAAGGAGTGGAGTGATAAGG+CGG | + | chr7.4:30911658-30911677 | None:intergenic | 45.0% | |
| AACATGAGCCTAACAACCAG+TGG | + | chr7.4:30911498-30911517 | None:intergenic | 45.0% | |
| AAGAGAACCATGCCAGCTAT+CGG | + | chr7.4:30913556-30913575 | None:intergenic | 45.0% | |
| ACCAAGTGATTGGGTTCAAG+TGG | + | chr7.4:30911954-30911973 | None:intergenic | 45.0% | |
| ACCACTTGAACCCAATCACT+TGG | - | chr7.4:30911950-30911969 | MS.gene92777:intron | 45.0% | |
| ACCAGTGCCATCAATTACAG+TGG | + | chr7.4:30910324-30910343 | None:intergenic | 45.0% | |
| AGAACCCGAGTTCGATTACT+AGG | + | chr7.4:30911897-30911916 | None:intergenic | 45.0% | |
| AGGTGAAACAATTCTTGGCC+AGG | + | chr7.4:30911877-30911896 | None:intergenic | 45.0% | |
| AGTGCTTCCTGATGCATTCA+AGG | - | chr7.4:30912388-30912407 | MS.gene92777:intron | 45.0% | |
| ATTTCGTTGTTGCAGCTCTG+AGG | - | chr7.4:30913029-30913048 | MS.gene92777:intron | 45.0% | |
| CGGGCCCATAAATCCAATTA+TGG | + | chr7.4:30913589-30913608 | None:intergenic | 45.0% | |
| CTTCTGTTCATGGGATTTGC+AGG | - | chr7.4:30912611-30912630 | MS.gene92777:intron | 45.0% | |
| GAAGACAAAAGAAGCTGCAC+AGG | + | chr7.4:30913207-30913226 | None:intergenic | 45.0% | |
| GCAATTGGAGCTATTCTCAG+TGG | - | chr7.4:30913615-30913634 | MS.gene92777:CDS | 45.0% | |
| GCATCCGCACAAATGAAAGA+AGG | + | chr7.4:30912299-30912318 | None:intergenic | 45.0% | |
| GTCCTTCCAGTCTCTTTACA+CGG | - | chr7.4:30913486-30913505 | MS.gene92777:CDS | 45.0% | |
| GTGGATCCTACATCCTTATG+TGG | + | chr7.4:30910305-30910324 | None:intergenic | 45.0% | |
| TGCATTGTTTACGTTGGCGA+TGG | - | chr7.4:30910415-30910434 | MS.gene92777:CDS | 45.0% | |
| TGTAGAGCTTGATCCGCAAT+GGG | - | chr7.4:30910475-30910494 | MS.gene92777:CDS | 45.0% | |
| TTGCTGCTGGATGCATGATT+TGG | - | chr7.4:30912351-30912370 | MS.gene92777:intron | 45.0% | |
| TTGTAGAGCTTGATCCGCAA+TGG | - | chr7.4:30910474-30910493 | MS.gene92777:CDS | 45.0% | |
| TTTAGCTGTGAGCATGGTGT+TGG | - | chr7.4:30911291-30911310 | MS.gene92777:intron | 45.0% | |
| ! | AATGGCTGCAGGTGTTATGT+TGG | - | chr7.4:30910514-30910533 | MS.gene92777:CDS | 45.0% |
| ! | AGAAGCGTGTATAAGGCTCT+TGG | + | chr7.4:30912099-30912118 | None:intergenic | 45.0% |
| ! | TCCACTGTAATTGATGGCAC+TGG | - | chr7.4:30910320-30910339 | MS.gene92777:CDS | 45.0% |
| ! | TGAAGGGTGTGAATACTGAG+CGG | + | chr7.4:30913366-30913385 | None:intergenic | 45.0% |
| ! | TGCTGGATGCATGATTTGGA+TGG | - | chr7.4:30912355-30912374 | MS.gene92777:intron | 45.0% |
| ! | TGGCTCCAAATCTGAAGCTA+AGG | - | chr7.4:30910177-30910196 | MS.gene92777:CDS | 45.0% |
| ! | TGTAGGTAAGTTATGGGCTG+AGG | + | chr7.4:30913331-30913350 | None:intergenic | 45.0% |
| ! | TTGTGTAATGGAATGGCTGC+AGG | - | chr7.4:30910503-30910522 | MS.gene92777:CDS | 45.0% |
| !! | AATGGTTTGGTGGTTGAGGT+GGG | + | chr7.4:30911686-30911705 | None:intergenic | 45.0% |
| !! | ATTCTTTTGGAGAGGGATCG+GGG | - | chr7.4:30911182-30911201 | MS.gene92777:CDS | 45.0% |
| !! | CATTCTTTTGGAGAGGGATC+GGG | - | chr7.4:30911181-30911200 | MS.gene92777:CDS | 45.0% |
| !! | CCATTCTTTTGGAGAGGGAT+CGG | - | chr7.4:30911180-30911199 | MS.gene92777:CDS | 45.0% |
| !! | CGCTTCTAGTTGTTCGGTTT+TGG | - | chr7.4:30912112-30912131 | MS.gene92777:intron | 45.0% |
| !! | GACTCTCCATTCTTTTGGAG+AGG | - | chr7.4:30911174-30911193 | MS.gene92777:intron | 45.0% |
| !! | GGCTCAAAGGGTTTTAGTCA+AGG | - | chr7.4:30911223-30911242 | MS.gene92777:CDS | 45.0% |
| !! | GGGTTTTAGTCAAGGCTTGT+TGG | - | chr7.4:30911231-30911250 | MS.gene92777:CDS | 45.0% |
| !! | GTCTCATTTGCTGGCTCAAA+GGG | - | chr7.4:30911211-30911230 | MS.gene92777:CDS | 45.0% |
| !! | GTTGGTAACCTTGGCTATTG+CGG | - | chr7.4:30911249-30911268 | MS.gene92777:CDS | 45.0% |
| !! | TCAAGGCTTGTTGGTAACCT+TGG | - | chr7.4:30911240-30911259 | MS.gene92777:CDS | 45.0% |
| AGAGGGTTTAGCTGTGAGCA+TGG | - | chr7.4:30911285-30911304 | MS.gene92777:intron | 50.0% | |
| AGCCTAACAACCAGTGGCAA+AGG | + | chr7.4:30911492-30911511 | None:intergenic | 50.0% | |
| ATACAGGAAGGGCAGGAGTA+TGG | - | chr7.4:30910554-30910573 | MS.gene92777:CDS | 50.0% | |
| ATGCTCACAGCTAAACCCTC+TGG | + | chr7.4:30911286-30911305 | None:intergenic | 50.0% | |
| ATGGGCCCGATATCAGCAAT+TGG | - | chr7.4:30913600-30913619 | MS.gene92777:CDS | 50.0% | |
| CCGATCCCTCTCCAAAAGAA+TGG | + | chr7.4:30911183-30911202 | None:intergenic | 50.0% | |
| CCTAACAACCAGTGGCAAAG+GGG | + | chr7.4:30911490-30911509 | None:intergenic | 50.0% | |
| CGACCAAGTCCATATGCCTT+TGG | + | chr7.4:30913459-30913478 | None:intergenic | 50.0% | |
| CTTAGGCACGCTCTTCTCAT+GGG | - | chr7.4:30913141-30913160 | MS.gene92777:intron | 50.0% | |
| CTTGCAGCAGCTGCCATAAT+TGG | - | chr7.4:30913573-30913592 | MS.gene92777:CDS | 50.0% | |
| GACCGTGTAAAGAGACTGGA+AGG | + | chr7.4:30913491-30913510 | None:intergenic | 50.0% | |
| GCAGCAAATCCCGTACAGAA+TGG | + | chr7.4:30912338-30912357 | None:intergenic | 50.0% | |
| GCCTAACAACCAGTGGCAAA+GGG | + | chr7.4:30911491-30911510 | None:intergenic | 50.0% | |
| GCGGTGCATAACATACCAGA+GGG | - | chr7.4:30911268-30911287 | MS.gene92777:intron | 50.0% | |
| GCTGCTCCACATAAGGATGT+AGG | - | chr7.4:30910296-30910315 | MS.gene92777:CDS | 50.0% | |
| GGAAGACCGTGTAAAGAGAC+TGG | + | chr7.4:30913495-30913514 | None:intergenic | 50.0% | |
| GGTAAGAGCTGCTCCACATA+AGG | - | chr7.4:30910289-30910308 | MS.gene92777:CDS | 50.0% | |
| GTGGCTGAAGGACTTGCATT+GGG | - | chr7.4:30913423-30913442 | MS.gene92777:CDS | 50.0% | |
| GTTATGCACCGCAATAGCCA+AGG | + | chr7.4:30911260-30911279 | None:intergenic | 50.0% | |
| TCACCAAAGGACCGATCGTT+CGG | + | chr7.4:30911921-30911940 | None:intergenic | 50.0% | |
| TCTGGAAGCTGGGTTGTTAC+TGG | - | chr7.4:30910578-30910597 | MS.gene92777:CDS | 50.0% | |
| TCTTAGGCACGCTCTTCTCA+TGG | - | chr7.4:30913140-30913159 | MS.gene92777:intron | 50.0% | |
| TCTTTACACGGTCTTCCTCG+TGG | - | chr7.4:30913498-30913517 | MS.gene92777:CDS | 50.0% | |
| TGAAGGACTTGCATTGGGAG+TGG | - | chr7.4:30913428-30913447 | MS.gene92777:CDS | 50.0% | |
| TGACTTGATACAGGAAGGGC+AGG | - | chr7.4:30910547-30910566 | MS.gene92777:CDS | 50.0% | |
| TGCGGTATTGCCTTCGTTCT+TGG | - | chr7.4:30913171-30913190 | MS.gene92777:intron | 50.0% | |
| TGCGGTGCATAACATACCAG+AGG | - | chr7.4:30911267-30911286 | MS.gene92777:intron | 50.0% | |
| TGTGGCTGAAGGACTTGCAT+TGG | - | chr7.4:30913422-30913441 | MS.gene92777:CDS | 50.0% | |
| TGTTAACCCTCCGATTCCCA+GGG | - | chr7.4:30911805-30911824 | MS.gene92777:intron | 50.0% | |
| TTACACAACCCAGCCCATTG+CGG | + | chr7.4:30910491-30910510 | None:intergenic | 50.0% | |
| ! | CTTCTCATGGGCATTGCTTG+CGG | - | chr7.4:30913153-30913172 | MS.gene92777:intron | 50.0% |
| ! | GAAGGGTGTGAATACTGAGC+GGG | + | chr7.4:30913365-30913384 | None:intergenic | 50.0% |
| ! | GCACCAAAGGCATATGGACT+TGG | - | chr7.4:30913453-30913472 | MS.gene92777:CDS | 50.0% |
| ! | GGCTGGGTTGTGTAATGGAA+TGG | - | chr7.4:30910496-30910515 | MS.gene92777:CDS | 50.0% |
| ! | TATTTGGAGCCACCGATAGC+TGG | - | chr7.4:30913541-30913560 | MS.gene92777:CDS | 50.0% |
| ! | TTGCCTTCGTTCTTGGTGCA+TGG | - | chr7.4:30913178-30913197 | MS.gene92777:intron | 50.0% |
| !! | AGCATGGTGTTGGCATCAAG+GGG | - | chr7.4:30911301-30911320 | MS.gene92777:intron | 50.0% |
| !! | AGGAGTATGGTTCTGGAAGC+TGG | - | chr7.4:30910567-30910586 | MS.gene92777:CDS | 50.0% |
| !! | ATGGCAGCTGCTACTGGTTT+AGG | - | chr7.4:30910434-30910453 | MS.gene92777:CDS | 50.0% |
| !! | ATGGTTTGGTGGTTGAGGTG+GGG | + | chr7.4:30911685-30911704 | None:intergenic | 50.0% |
| !! | CAATGGGCTGGGTTGTGTAA+TGG | - | chr7.4:30910491-30910510 | MS.gene92777:CDS | 50.0% |
| !! | GAATGGTTTGGTGGTTGAGG+TGG | + | chr7.4:30911687-30911706 | None:intergenic | 50.0% |
| !! | GAGCATGGTGTTGGCATCAA+GGG | - | chr7.4:30911300-30911319 | MS.gene92777:intron | 50.0% |
| !! | GATAAACGGAAGAGCACCTG+TGG | - | chr7.4:30913732-30913751 | MS.gene92777:CDS | 50.0% |
| !! | GGAGTATGGTTCTGGAAGCT+GGG | - | chr7.4:30910568-30910587 | MS.gene92777:CDS | 50.0% |
| !! | GGTCTCATTTGCTGGCTCAA+AGG | - | chr7.4:30911210-30911229 | MS.gene92777:CDS | 50.0% |
| !! | TGAGCATGGTGTTGGCATCA+AGG | - | chr7.4:30911299-30911318 | MS.gene92777:intron | 50.0% |
| !! | TTCTGTACGGGATTTGCTGC+TGG | - | chr7.4:30912338-30912357 | MS.gene92777:intron | 50.0% |
| !! | TTCTTTTGGAGAGGGATCGG+GGG | - | chr7.4:30911183-30911202 | MS.gene92777:CDS | 50.0% |
| AGAACCATGCCAGCTATCGG+TGG | + | chr7.4:30913553-30913572 | None:intergenic | 55.0% | |
| AGCGGGAAGCCAGTGATTGT+AGG | + | chr7.4:30913348-30913367 | None:intergenic | 55.0% | |
| AGTGGCAAAGGGGAGAGCAA+AGG | + | chr7.4:30911480-30911499 | None:intergenic | 55.0% | |
| ATAGGAAGCCTCGCCTTCAC+AGG | - | chr7.4:30912746-30912765 | MS.gene92777:CDS | 55.0% | |
| ATTGGGAGTGGCTGCACCAA+AGG | - | chr7.4:30913440-30913459 | MS.gene92777:CDS | 55.0% | |
| CACCAAAGGACCGATCGTTC+GGG | + | chr7.4:30911920-30911939 | None:intergenic | 55.0% | |
| GCAGCTGATGCAACCTGTGA+AGG | + | chr7.4:30912762-30912781 | None:intergenic | 55.0% | |
| GCCAGGCTATACTTACCCCA+CGG | + | chr7.4:30911860-30911879 | None:intergenic | 55.0% | |
| GCTGTGGCCAGCTGCATATT+TGG | - | chr7.4:30913525-30913544 | MS.gene92777:CDS | 55.0% | |
| GGTGGCTCCAAATATGCAGC+TGG | + | chr7.4:30913535-30913554 | None:intergenic | 55.0% | |
| GTGTTAACCCTCCGATTCCC+AGG | - | chr7.4:30911804-30911823 | MS.gene92777:intron | 55.0% | |
| GTTAACCCTCCGATTCCCAG+GGG | - | chr7.4:30911806-30911825 | MS.gene92777:intron | 55.0% | |
| TCGCCATGCACCAAGAACGA+AGG | + | chr7.4:30913184-30913203 | None:intergenic | 55.0% | |
| TGATGCAACCTGTGAAGGCG+AGG | + | chr7.4:30912757-30912776 | None:intergenic | 55.0% | |
| TGCAGTAGCTCTTCACGCTG+TGG | - | chr7.4:30913404-30913423 | MS.gene92777:CDS | 55.0% | |
| TGGTTGAGGTGGGGGAGTAA+AGG | + | chr7.4:30911676-30911695 | None:intergenic | 55.0% | |
| TTTGCTCTCCCCTTTGCCAC+TGG | - | chr7.4:30911479-30911498 | MS.gene92777:intron | 55.0% | |
| TTTGGCCTAGGCCCATCACT+TGG | - | chr7.4:30913081-30913100 | MS.gene92777:intron | 55.0% | |
| ! | AGCTTGATCCGCAATGGGCT+GGG | - | chr7.4:30910480-30910499 | MS.gene92777:CDS | 55.0% |
| ! | CCCCTTTGCCACTGGTTGTT+AGG | - | chr7.4:30911487-30911506 | MS.gene92777:intron | 55.0% |
| ! | GAAGGGCAGGAGTATGGTTC+TGG | - | chr7.4:30910560-30910579 | MS.gene92777:CDS | 55.0% |
| ! | GGCCTTGGTAATCCGGAGTT+CGG | - | chr7.4:30911834-30911853 | MS.gene92777:intron | 55.0% |
| ! | GTGGCTGCACCAAAGGCATA+TGG | - | chr7.4:30913447-30913466 | MS.gene92777:CDS | 55.0% |
| !! | TGCAGCTCTGAGGATGCATC+TGG | - | chr7.4:30913039-30913058 | MS.gene92777:intron | 55.0% |
| !! | TGGTTTGGTGGTTGAGGTGG+GGG | + | chr7.4:30911684-30911703 | None:intergenic | 55.0% |
| CTCCCGAACGATCGGTCCTT+TGG | - | chr7.4:30911915-30911934 | MS.gene92777:intron | 60.0% | |
| CTCGGGTTCTCCCGAACGAT+CGG | - | chr7.4:30911907-30911926 | MS.gene92777:intron | 60.0% | |
| GAGCTTGATCCGCAATGGGC+TGG | - | chr7.4:30910479-30910498 | MS.gene92777:CDS | 60.0% | |
| GAGGTGGGGGAGTAAAGGAG+TGG | + | chr7.4:30911671-30911690 | None:intergenic | 60.0% | |
| GCCGTGGGGTAAGTATAGCC+TGG | - | chr7.4:30911856-30911875 | MS.gene92777:intron | 60.0% | |
| GCTCTTCACGCTGTGGCTGA+AGG | - | chr7.4:30913411-30913430 | MS.gene92777:CDS | 60.0% | |
| GGCCGAACTCCGGATTACCA+AGG | + | chr7.4:30911839-30911858 | None:intergenic | 60.0% | |
| GGGAGTGGGGGTAGATCACT+GGG | - | chr7.4:30911632-30911651 | MS.gene92777:CDS | 60.0% | |
| GGGGTTGGGGTCTCATTTGC+TGG | - | chr7.4:30911202-30911221 | MS.gene92777:CDS | 60.0% | |
| GTAATCCGGAGTTCGGCCGT+GGG | - | chr7.4:30911841-30911860 | MS.gene92777:intron | 60.0% | |
| TAATCCGGAGTTCGGCCGTG+GGG | - | chr7.4:30911842-30911861 | MS.gene92777:intron | 60.0% | |
| TCTTCCTCGTGGTGCAGCTG+TGG | - | chr7.4:30913509-30913528 | MS.gene92777:CDS | 60.0% | |
| TGGGAGTGGGGGTAGATCAC+TGG | - | chr7.4:30911631-30911650 | MS.gene92777:CDS | 60.0% | |
| TTGGAGAGGGATCGGGGGTT+GGG | - | chr7.4:30911188-30911207 | MS.gene92777:CDS | 60.0% | |
| TTGGCGATGGCAGCTGCTAC+TGG | - | chr7.4:30910428-30910447 | MS.gene92777:CDS | 60.0% | |
| TTTGGAGAGGGATCGGGGGT+TGG | - | chr7.4:30911187-30911206 | MS.gene92777:CDS | 60.0% | |
| ! | GGAAGGGGGCCTTGGTAATC+CGG | - | chr7.4:30911827-30911846 | MS.gene92777:intron | 60.0% |
| !! | TTCCGCCAAGTGATGGGCCT+AGG | + | chr7.4:30913089-30913108 | None:intergenic | 60.0% |
| ACCCTCCGATTCCCAGGGGA+AGG | - | chr7.4:30911810-30911829 | MS.gene92777:intron | 65.0% | |
| CCCTCCGATTCCCAGGGGAA+GGG | - | chr7.4:30911811-30911830 | MS.gene92777:intron | 65.0% | |
| CCCTTCCCCTGGGAATCGGA+GGG | + | chr7.4:30911814-30911833 | None:intergenic | 65.0% | |
| CCTCCGATTCCCAGGGGAAG+GGG | - | chr7.4:30911812-30911831 | MS.gene92777:intron | 65.0% | |
| CTCCGATTCCCAGGGGAAGG+GGG | - | chr7.4:30911813-30911832 | MS.gene92777:intron | 65.0% | |
| CTTACCCCACGGCCGAACTC+CGG | + | chr7.4:30911849-30911868 | None:intergenic | 65.0% | |
| GGAGCCACCGATAGCTGGCA+TGG | - | chr7.4:30913546-30913565 | MS.gene92777:CDS | 65.0% | |
| GGCCTAGGCCCATCACTTGG+CGG | - | chr7.4:30913084-30913103 | MS.gene92777:intron | 65.0% | |
| GGTAATCCGGAGTTCGGCCG+TGG | - | chr7.4:30911840-30911859 | MS.gene92777:intron | 65.0% | |
| TACCAAGGCCCCCTTCCCCT+GGG | + | chr7.4:30911824-30911843 | None:intergenic | 65.0% | |
| TGGAGAGGGATCGGGGGTTG+GGG | - | chr7.4:30911189-30911208 | MS.gene92777:CDS | 65.0% | |
| TTACCAAGGCCCCCTTCCCC+TGG | + | chr7.4:30911825-30911844 | None:intergenic | 65.0% | |
| CCCCTTCCCCTGGGAATCGG+AGG | + | chr7.4:30911815-30911834 | None:intergenic | 70.0% | |
| CTGGCCACAGCTGCACCACG+AGG | + | chr7.4:30913516-30913535 | None:intergenic | 70.0% | |
| GGCCCCCTTCCCCTGGGAAT+CGG | + | chr7.4:30911818-30911837 | None:intergenic | 70.0% | |
| TTCCCAGGGGAAGGGGGCCT+TGG | - | chr7.4:30911819-30911838 | MS.gene92777:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 30910167 | 30913857 | 30910167 | ID=MS.gene92777 |
| chr7.4 | mRNA | 30910167 | 30913857 | 30910167 | ID=MS.gene92777.t1;Parent=MS.gene92777 |
| chr7.4 | exon | 30913384 | 30913857 | 30913384 | ID=MS.gene92777.t1.exon1;Parent=MS.gene92777.t1 |
| chr7.4 | CDS | 30913384 | 30913857 | 30913384 | ID=cds.MS.gene92777.t1;Parent=MS.gene92777.t1 |
| chr7.4 | exon | 30912649 | 30912933 | 30912649 | ID=MS.gene92777.t1.exon2;Parent=MS.gene92777.t1 |
| chr7.4 | CDS | 30912649 | 30912933 | 30912649 | ID=cds.MS.gene92777.t1;Parent=MS.gene92777.t1 |
| chr7.4 | exon | 30911615 | 30911743 | 30911615 | ID=MS.gene92777.t1.exon3;Parent=MS.gene92777.t1 |
| chr7.4 | CDS | 30911615 | 30911743 | 30911615 | ID=cds.MS.gene92777.t1;Parent=MS.gene92777.t1 |
| chr7.4 | exon | 30911177 | 30911274 | 30911177 | ID=MS.gene92777.t1.exon4;Parent=MS.gene92777.t1 |
| chr7.4 | CDS | 30911177 | 30911274 | 30911177 | ID=cds.MS.gene92777.t1;Parent=MS.gene92777.t1 |
| chr7.4 | exon | 30910167 | 30910980 | 30910167 | ID=MS.gene92777.t1.exon5;Parent=MS.gene92777.t1 |
| chr7.4 | CDS | 30910167 | 30910980 | 30910167 | ID=cds.MS.gene92777.t1;Parent=MS.gene92777.t1 |
| Gene Sequence |
| Protein sequence |
