AlfalfaGEDB | MS.gene58098

M. sativa cultivar XinJiangDaYe / MS.gene58098

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0097159 GO:1901363
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58098.t1	XP_003630218.2	94.8	305	14	1	1	305	1	303	1.90E-115	425.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58098.t1	Q9ASQ2	47.7	241	115	3	68	301	70	306	5.3e-50	199.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58098.t1	A0A0C3Y601	94.8	305	14	1	1	305	1	303	1.4e-115	425.6

TFs/TRs:

Gene ID	Type	Classification
MS.gene58098.t1	TF	MYB-related

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049129	MS.gene58098	-0.80333	3.67E-49	-1.69E-46
MS.gene049166	MS.gene58098	0.827524	1.49E-54	-1.69E-46
MS.gene049255	MS.gene58098	0.81407	1.86E-51	-1.69E-46
MS.gene049411	MS.gene58098	0.843516	1.34E-58	-1.69E-46
MS.gene049887	MS.gene58098	0.831235	1.87E-55	-1.69E-46
MS.gene050084	MS.gene58098	0.820618	6.24E-53	-1.69E-46
MS.gene050085	MS.gene58098	0.852762	3.73E-61	-1.69E-46
MS.gene050317	MS.gene58098	0.83248	9.23E-56	-1.69E-46
MS.gene050320	MS.gene58098	0.818222	2.19E-52	-1.69E-46
MS.gene050359	MS.gene58098	0.824751	6.81E-54	-1.69E-46
MS.gene050384	MS.gene58098	0.815837	7.53E-52	-1.69E-46
MS.gene050386	MS.gene58098	0.834221	3.40E-56	-1.69E-46
MS.gene050551	MS.gene58098	0.803347	3.64E-49	-1.69E-46
MS.gene050646	MS.gene58098	0.812303	4.54E-51	-1.69E-46
MS.gene050654	MS.gene58098	0.822869	1.88E-53	-1.69E-46
MS.gene050689	MS.gene58098	0.851149	1.07E-60	-1.69E-46
MS.gene050752	MS.gene58098	0.877069	8.44E-69	-1.69E-46
MS.gene050838	MS.gene58098	0.899989	1.15E-77	-1.69E-46
MS.gene050945	MS.gene58098	0.815275	1.00E-51	-1.69E-46
MS.gene050955	MS.gene58098	0.835443	1.67E-56	-1.69E-46
MS.gene051003	MS.gene58098	0.897772	1.02E-76	-1.69E-46
MS.gene051233	MS.gene58098	0.870107	1.87E-66	-1.69E-46
MS.gene051234	MS.gene58098	0.887427	1.44E-72	-1.69E-46
MS.gene051328	MS.gene58098	0.807069	6.05E-50	-1.69E-46
MS.gene051343	MS.gene58098	0.865629	5.14E-65	-1.69E-46
MS.gene051381	MS.gene58098	0.827689	1.36E-54	-1.69E-46
MS.gene051642	MS.gene58098	0.822493	2.30E-53	-1.69E-46
MS.gene051748	MS.gene58098	0.810852	9.38E-51	-1.69E-46
MS.gene051850	MS.gene58098	0.822682	2.08E-53	-1.69E-46
MS.gene05188	MS.gene58098	0.822332	2.51E-53	-1.69E-46
MS.gene051902	MS.gene58098	0.83653	8.87E-57	-1.69E-46
MS.gene051903	MS.gene58098	0.818452	1.95E-52	-1.69E-46
MS.gene051975	MS.gene58098	0.824805	6.62E-54	-1.69E-46
MS.gene052072	MS.gene58098	0.839182	1.85E-57	-1.69E-46
MS.gene052296	MS.gene58098	0.827988	1.15E-54	-1.69E-46
MS.gene052307	MS.gene58098	0.810532	1.10E-50	-1.69E-46
MS.gene052335	MS.gene58098	0.838866	2.23E-57	-1.69E-46
MS.gene052342	MS.gene58098	0.847971	8.25E-60	-1.69E-46
MS.gene052397	MS.gene58098	0.825778	3.89E-54	-1.69E-46
MS.gene052434	MS.gene58098	0.852601	4.15E-61	-1.69E-46
MS.gene052479	MS.gene58098	0.806661	7.38E-50	-1.69E-46
MS.gene052947	MS.gene58098	0.826017	3.42E-54	-1.69E-46
MS.gene053058	MS.gene58098	0.884713	1.52E-71	-1.69E-46
MS.gene053109	MS.gene58098	0.833139	6.33E-56	-1.69E-46
MS.gene053143	MS.gene58098	0.812842	3.46E-51	-1.69E-46
MS.gene053167	MS.gene58098	0.809527	1.81E-50	-1.69E-46
MS.gene053564	MS.gene58098	0.834144	3.55E-56	-1.69E-46
MS.gene053590	MS.gene58098	0.810267	1.25E-50	-1.69E-46
MS.gene05364	MS.gene58098	0.81305	3.11E-51	-1.69E-46
MS.gene053952	MS.gene58098	0.80977	1.61E-50	-1.69E-46
MS.gene054004	MS.gene58098	0.825373	4.86E-54	-1.69E-46
MS.gene054403	MS.gene58098	0.873601	1.30E-67	-1.69E-46
MS.gene05517	MS.gene58098	0.80227	6.08E-49	-1.69E-46
MS.gene055311	MS.gene58098	0.827175	1.81E-54	-1.69E-46
MS.gene055424	MS.gene58098	0.83367	4.67E-56	-1.69E-46
MS.gene055513	MS.gene58098	0.811408	7.11E-51	-1.69E-46
MS.gene055979	MS.gene58098	0.825126	5.56E-54	-1.69E-46
MS.gene056097	MS.gene58098	0.838261	3.20E-57	-1.69E-46
MS.gene056181	MS.gene58098	0.872526	2.97E-67	-1.69E-46
MS.gene056578	MS.gene58098	0.827356	1.64E-54	-1.69E-46
MS.gene056580	MS.gene58098	0.818684	1.72E-52	-1.69E-46
MS.gene056752	MS.gene58098	0.840668	7.57E-58	-1.69E-46
MS.gene056787	MS.gene58098	0.825657	4.16E-54	-1.69E-46
MS.gene056801	MS.gene58098	0.801914	7.19E-49	-1.69E-46
MS.gene056986	MS.gene58098	0.809336	1.99E-50	-1.69E-46
MS.gene056992	MS.gene58098	0.808205	3.47E-50	-1.69E-46
MS.gene057057	MS.gene58098	0.824598	7.40E-54	-1.69E-46
MS.gene057094	MS.gene58098	0.835832	1.33E-56	-1.69E-46
MS.gene057234	MS.gene58098	0.851578	8.10E-61	-1.69E-46
MS.gene057705	MS.gene58098	0.823443	1.38E-53	-1.69E-46
MS.gene05781	MS.gene58098	0.863855	1.85E-64	-1.69E-46
MS.gene057890	MS.gene58098	-0.804099	2.54E-49	-1.69E-46
MS.gene057999	MS.gene58098	0.814385	1.58E-51	-1.69E-46
MS.gene058054	MS.gene58098	0.845863	3.12E-59	-1.69E-46
MS.gene058055	MS.gene58098	0.842879	1.97E-58	-1.69E-46
MS.gene058074	MS.gene58098	0.820624	6.22E-53	-1.69E-46
MS.gene058149	MS.gene58098	0.810025	1.41E-50	-1.69E-46
MS.gene058238	MS.gene58098	0.820263	7.52E-53	-1.69E-46
MS.gene058261	MS.gene58098	0.861471	1.00E-63	-1.69E-46
MS.gene058638	MS.gene58098	0.805061	1.60E-49	-1.69E-46
MS.gene058639	MS.gene58098	0.816234	6.14E-52	-1.69E-46
MS.gene058646	MS.gene58098	0.81342	2.58E-51	-1.69E-46
MS.gene058654	MS.gene58098	0.820337	7.23E-53	-1.69E-46
MS.gene05880	MS.gene58098	0.807632	4.60E-50	-1.69E-46
MS.gene058976	MS.gene58098	0.81543	9.28E-52	-1.69E-46
MS.gene059007	MS.gene58098	0.804086	2.56E-49	-1.69E-46
MS.gene059146	MS.gene58098	0.87347	1.43E-67	-1.69E-46
MS.gene059171	MS.gene58098	0.83964	1.40E-57	-1.69E-46
MS.gene059227	MS.gene58098	0.807386	5.18E-50	-1.69E-46
MS.gene05978	MS.gene58098	0.804068	2.58E-49	-1.69E-46
MS.gene059787	MS.gene58098	0.805286	1.44E-49	-1.69E-46
MS.gene06010	MS.gene58098	0.80416	2.47E-49	-1.69E-46
MS.gene06011	MS.gene58098	0.846616	1.94E-59	-1.69E-46
MS.gene060463	MS.gene58098	0.815783	7.74E-52	-1.69E-46
MS.gene060465	MS.gene58098	0.820701	5.97E-53	-1.69E-46
MS.gene060563	MS.gene58098	0.835161	1.97E-56	-1.69E-46
MS.gene060763	MS.gene58098	0.858783	6.50E-63	-1.69E-46
MS.gene061006	MS.gene58098	0.840277	9.58E-58	-1.69E-46
MS.gene061100	MS.gene58098	0.838784	2.34E-57	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58098.t1	MTR_8g093080	95.738	305	11	1	1	305	1	303	0.0	587
MS.gene58098.t1	MTR_3g114060	30.660	212	93	3	139	302	128	333	9.06e-23	96.7
MS.gene58098.t1	MTR_3g113680	30.702	228	98	4	132	302	428	652	1.24e-22	98.6
MS.gene58098.t1	MTR_7g109430	31.140	228	97	4	132	302	428	652	1.89e-22	97.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58098.t1	AT5G45420	51.553	322	119	10	1	301	1	306	1.54e-82	251
MS.gene58098.t1	AT5G45420	51.553	322	119	10	1	301	1	306	1.54e-82	251
MS.gene58098.t1	AT5G45420	51.553	322	119	10	1	301	1	306	1.54e-82	251
MS.gene58098.t1	AT3G11450	34.615	182	80	3	159	302	466	646	6.76e-22	96.3
MS.gene58098.t1	AT5G06110	30.732	205	97	4	140	300	457	660	7.54e-19	87.4
MS.gene58098.t1	AT5G06110	30.732	205	97	4	140	300	457	660	7.54e-19	87.4

Find 96 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAACGATTTCGTTGGTTTC+TGG	0.174909	4.2:-9407457	None:intergenic
AAAGTTGCTGCTGCTGTTCC+TGG	0.293700	4.2:+9408190	MS.gene58098:CDS
TCGGTTGAGGTTTCCTGATC+GGG	0.354119	4.2:-9407659	None:intergenic
GTGAGAAAGTTGAAAGTGTT+TGG	0.354834	4.2:+9408095	MS.gene58098:CDS
CAGAATTGAAGAAAGGGTTT+CGG	0.376978	4.2:+9408245	MS.gene58098:CDS
TGCATTGTCGGCGGCGGTGG+TGG	0.384974	4.2:+9407811	MS.gene58098:CDS
GGGTTTCGGACTGCAAAATC+TGG	0.390024	4.2:+9408259	MS.gene58098:CDS
TTTGCATTCTCTCTCCTCCT+TGG	0.398248	4.2:+9407569	MS.gene58098:CDS
TTGAAGAATCGAAATGGAAA+TGG	0.409406	4.2:+9407779	MS.gene58098:CDS
TCGCCACCGGTGATGGAGAT+TGG	0.412011	4.2:-9407602	None:intergenic
CATCTCATAGCAACATCTTT+CGG	0.412166	4.2:-9408163	None:intergenic
AAAGGAGTTGGGAGAGAAGA+AGG	0.421544	4.2:+9407982	MS.gene58098:CDS
AGAGAAGAAGGTTGATGATT+CGG	0.423910	4.2:+9407994	MS.gene58098:CDS
GATAAGAGACTTGTTGAAGA+AGG	0.424391	4.2:+9408055	MS.gene58098:CDS
GTCGGCGGCGGTGGTGGAGG+AGG	0.424999	4.2:+9407817	MS.gene58098:CDS
TGTTGCATTGTCGGCGGCGG+TGG	0.428265	4.2:+9407808	MS.gene58098:CDS
CGGGTGCACCGGACTGATAC+AGG	0.433545	4.2:-9407412	None:intergenic
ATTGTCGGCGGCGGTGGTGG+AGG	0.433697	4.2:+9407814	MS.gene58098:CDS
TGGAAACGGTGTTGCATTGT+CGG	0.435353	4.2:+9407799	MS.gene58098:CDS
TGCCGTCAATTTCCCCGATC+AGG	0.438106	4.2:+9407646	MS.gene58098:CDS
ATCATCCGATCTGCGTTGCT+TGG	0.438785	4.2:-9407720	None:intergenic
GGCGGCGGTGGTGGAGGAGG+AGG	0.446195	4.2:+9407820	MS.gene58098:CDS
AGAATTGCAGAATTGAAGAA+AGG	0.450045	4.2:+9408238	MS.gene58098:CDS
ATCGGTTGAGGTTTCCTGAT+CGG	0.454293	4.2:-9407660	None:intergenic
GAGGCGATAGCGGAGGCATT+CGG	0.458797	4.2:+9407923	MS.gene58098:CDS
GGCGATTCCCGTGTCGGCCG+TGG	0.459227	4.2:+9407620	MS.gene58098:CDS
GATTTCGTTGGTTTCTGGTA+AGG	0.461575	4.2:-9407452	None:intergenic
TTCAGTGGCCGCGGGTGCAC+CGG	0.461986	4.2:-9407423	None:intergenic
CGAAAGATGTTGCTATGAGA+TGG	0.463082	4.2:+9408164	MS.gene58098:CDS
TGGAGGAGGAGGAGAAGGAA+TGG	0.463216	4.2:+9407831	MS.gene58098:CDS
GTTTCGTTGAAGAATCGAAA+TGG	0.464225	4.2:+9407773	MS.gene58098:CDS
CAACCGATGAGGATGATTCC+AGG	0.465520	4.2:+9407675	MS.gene58098:CDS
GGAATCATCCTCATCGGTTG+AGG	0.470477	4.2:-9407672	None:intergenic
TCGATTTGAGCGGTTCAGAT+TGG	0.470526	4.2:-9407535	None:intergenic
AGGCTGTGATTCAGTGGCCG+CGG	0.476901	4.2:-9407432	None:intergenic
CGGCATGACCACGGCCGACA+CGG	0.478990	4.2:-9407628	None:intergenic
TTCAACGAAACCACCGGCGC+TGG	0.480043	4.2:-9407761	None:intergenic
GGCATGACCACGGCCGACAC+GGG	0.485981	4.2:-9407627	None:intergenic
GGTGGTGGAGGAGGAGGAGA+AGG	0.492408	4.2:+9407826	MS.gene58098:CDS
ACGGGAATCGCCACCGGTGA+TGG	0.494267	4.2:-9407609	None:intergenic
AAGAGACTTGTTGAAGAAGG+AGG	0.496476	4.2:+9408058	MS.gene58098:CDS
TCCCACCGTCCTGGTTTCCC+CGG	0.499822	4.2:-9407902	None:intergenic
GAAGATTGAAGAGATTGAAA+CGG	0.500067	4.2:-9407489	None:intergenic
GGCTGTGATTCAGTGGCCGC+GGG	0.502205	4.2:-9407431	None:intergenic
GAATTGCAGAATTGAAGAAA+GGG	0.503367	4.2:+9408239	MS.gene58098:CDS
CAAGCTGCTTTCGATTTCCC+AGG	0.506123	4.2:-9408208	None:intergenic
GCCGACACGGGAATCGCCAC+CGG	0.506767	4.2:-9407615	None:intergenic
CACCGTCCTGGTTTCCCCGG+TGG	0.513685	4.2:-9407899	None:intergenic
ACCGGTGGCGATTCCCGTGT+CGG	0.514698	4.2:+9407614	MS.gene58098:CDS
GGTGAAGAAATCAAAGGAGT+TGG	0.518193	4.2:+9407970	MS.gene58098:CDS
CGGTGTTGCATTGTCGGCGG+CGG	0.518420	4.2:+9407805	MS.gene58098:CDS
GTGAAGAAATCAAAGGAGTT+GGG	0.518866	4.2:+9407971	MS.gene58098:CDS
CGATTCTTCAACGAAACCAC+CGG	0.522401	4.2:-9407767	None:intergenic
TTCGCTCCAATCTCCATCAC+CGG	0.528589	4.2:+9407596	MS.gene58098:CDS
GAAGGAGGAGATTTAGCGAC+GGG	0.533839	4.2:+9408073	MS.gene58098:CDS
TCTGAAGAAGAGAAAAGCGT+TGG	0.535242	4.2:+9408033	MS.gene58098:CDS
GCTATCGCCTCCCACCGTCC+TGG	0.536007	4.2:-9407911	None:intergenic
CTCTGTAGTAGCTCCAGCGC+CGG	0.539400	4.2:+9407748	MS.gene58098:CDS
AATCGAAATGGAAATGGAAA+CGG	0.539438	4.2:+9407785	MS.gene58098:CDS
TTTCCTGGAATCATCCTCAT+CGG	0.539989	4.2:-9407678	None:intergenic
AGGACGGTGGGAGGCGATAG+CGG	0.545275	4.2:+9407913	MS.gene58098:CDS
GGGGAAACCAGGACGGTGGG+AGG	0.546154	4.2:+9407904	MS.gene58098:CDS
AAGTTGCTGCTGCTGTTCCT+GGG	0.554829	4.2:+9408191	MS.gene58098:CDS
CAGATCCAAGCAACGCAGAT+CGG	0.555740	4.2:+9407715	MS.gene58098:CDS
ACCGGGGAAACCAGGACGGT+GGG	0.559178	4.2:+9407901	MS.gene58098:CDS
CCGAAGTTCCTGTATCAGTC+CGG	0.563162	4.2:+9407404	MS.gene58098:CDS
GGCATTCGGAGGGCGTCACA+AGG	0.566101	4.2:+9407937	MS.gene58098:CDS
GAAAGATGTTGCTATGAGAT+GGG	0.567305	4.2:+9408165	MS.gene58098:CDS
CTGGTAAGGCTGTGATTCAG+TGG	0.573589	4.2:-9407438	None:intergenic
CCGGACTGATACAGGAACTT+CGG	0.574834	4.2:-9407404	None:intergenic
TGTAGTAGCTCCAGCGCCGG+TGG	0.575392	4.2:+9407751	MS.gene58098:CDS
CACCGGGGAAACCAGGACGG+TGG	0.578167	4.2:+9407900	MS.gene58098:CDS
TTCCTGATCGGGGAAATTGA+CGG	0.583685	4.2:-9407648	None:intergenic
GCGATAGCGGAGGCATTCGG+AGG	0.585439	4.2:+9407926	MS.gene58098:CDS
GGAAATTGACGGCATGACCA+CGG	0.588936	4.2:-9407637	None:intergenic
GTATCAGTCCGGTGCACCCG+CGG	0.599158	4.2:+9407415	MS.gene58098:CDS
GCGTCACAAGGTGGAAAGCG+TGG	0.605173	4.2:+9407949	MS.gene58098:CDS
GTGATGGAGATTGGAGCGAA+AGG	0.613349	4.2:-9407593	None:intergenic
ACAGCGATGAACGATTTCGT+TGG	0.617295	4.2:-9407464	None:intergenic
TGAGATTCTGAAGAAACAGA+TGG	0.629866	4.2:+9407868	MS.gene58098:CDS
CGGTTGAGGTTTCCTGATCG+GGG	0.631525	4.2:-9407658	None:intergenic
ATCCACCGGGGAAACCAGGA+CGG	0.634948	4.2:+9407897	MS.gene58098:CDS
AAGTGTTTGGAGTTCAAACG+AGG	0.645478	4.2:+9408108	MS.gene58098:CDS
AGAAGGAGGAGATTTAGCGA+CGG	0.648578	4.2:+9408072	MS.gene58098:CDS
CGGCGCTGGAGCTACTACAG+AGG	0.650195	4.2:-9407747	None:intergenic
CGATAGCGGAGGCATTCGGA+GGG	0.653736	4.2:+9407927	MS.gene58098:CDS
GCTCCAATCTCCATCACCGG+TGG	0.664118	4.2:+9407599	MS.gene58098:CDS
ACGGTGGGAGGCGATAGCGG+AGG	0.665574	4.2:+9407916	MS.gene58098:CDS
AAGCGTGGTGAAGAAATCAA+AGG	0.666488	4.2:+9407964	MS.gene58098:CDS
AAACGGTGTTGCATTGTCGG+CGG	0.669146	4.2:+9407802	MS.gene58098:CDS
TCAGGAAACCTCAACCGATG+AGG	0.671357	4.2:+9407664	MS.gene58098:CDS
AGATTGGAGCGAAAGGACCA+AGG	0.675323	4.2:-9407586	None:intergenic
ATTCGGAGGGCGTCACAAGG+TGG	0.679939	4.2:+9407940	MS.gene58098:CDS
CAGATGAAAATCGATTTGAG+CGG	0.706129	4.2:-9407545	None:intergenic
TTGGAGCGAAAGGACCAAGG+AGG	0.738797	4.2:-9407583	None:intergenic
GGAGAAGGAATGGAACGACG+AGG	0.745135	4.2:+9407841	MS.gene58098:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AATCGAAATGGAAATGGAAA+CGG	+	chr4.2:9407785-9407804	MS.gene58098:CDS	30.0%
	AGAATTGCAGAATTGAAGAA+AGG	+	chr4.2:9408238-9408257	MS.gene58098:CDS	30.0%
	GAAGATTGAAGAGATTGAAA+CGG	-	chr4.2:9407492-9407511	None:intergenic	30.0%
	GAATTGCAGAATTGAAGAAA+GGG	+	chr4.2:9408239-9408258	MS.gene58098:CDS	30.0%
	TTGAAGAATCGAAATGGAAA+TGG	+	chr4.2:9407779-9407798	MS.gene58098:CDS	30.0%
	CAGAATTGAAGAAAGGGTTT+CGG	+	chr4.2:9408245-9408264	MS.gene58098:CDS	35.0%
	CATCTCATAGCAACATCTTT+CGG	-	chr4.2:9408166-9408185	None:intergenic	35.0%
	GAAAGATGTTGCTATGAGAT+GGG	+	chr4.2:9408165-9408184	MS.gene58098:CDS	35.0%
	GTGAAGAAATCAAAGGAGTT+GGG	+	chr4.2:9407971-9407990	MS.gene58098:CDS	35.0%
	GTTTCGTTGAAGAATCGAAA+TGG	+	chr4.2:9407773-9407792	MS.gene58098:CDS	35.0%
!	TGAGATTCTGAAGAAACAGA+TGG	+	chr4.2:9407868-9407887	MS.gene58098:CDS	35.0%
!!	AGAGAAGAAGGTTGATGATT+CGG	+	chr4.2:9407994-9408013	MS.gene58098:CDS	35.0%
!!	CAGATGAAAATCGATTTGAG+CGG	-	chr4.2:9407548-9407567	None:intergenic	35.0%
!!	GATAAGAGACTTGTTGAAGA+AGG	+	chr4.2:9408055-9408074	MS.gene58098:CDS	35.0%
!!	GTGAGAAAGTTGAAAGTGTT+TGG	+	chr4.2:9408095-9408114	MS.gene58098:CDS	35.0%
	AAGCGTGGTGAAGAAATCAA+AGG	+	chr4.2:9407964-9407983	MS.gene58098:CDS	40.0%
	ACAGATGGTGAAAAATCCAC+CGG	+	chr4.2:9407883-9407902	MS.gene58098:CDS	40.0%
	CGAAAGATGTTGCTATGAGA+TGG	+	chr4.2:9408164-9408183	MS.gene58098:CDS	40.0%
	GGTGAAGAAATCAAAGGAGT+TGG	+	chr4.2:9407970-9407989	MS.gene58098:CDS	40.0%
	TTTCCTGGAATCATCCTCAT+CGG	-	chr4.2:9407681-9407700	None:intergenic	40.0%
!	AAGTGTTTGGAGTTCAAACG+AGG	+	chr4.2:9408108-9408127	MS.gene58098:CDS	40.0%
!	TCTGAAGAAGAGAAAAGCGT+TGG	+	chr4.2:9408033-9408052	MS.gene58098:CDS	40.0%
!!	AAGAGACTTGTTGAAGAAGG+AGG	+	chr4.2:9408058-9408077	MS.gene58098:CDS	40.0%
!!	CGCTCAAATCGATTTTCATC+TGG	+	chr4.2:9407546-9407565	MS.gene58098:CDS	40.0%
!!	GATTTCGTTGGTTTCTGGTA+AGG	-	chr4.2:9407455-9407474	None:intergenic	40.0%
!!	TGAACGATTTCGTTGGTTTC+TGG	-	chr4.2:9407460-9407479	None:intergenic	40.0%
	AAAGGAGTTGGGAGAGAAGA+AGG	+	chr4.2:9407982-9408001	MS.gene58098:CDS	45.0%
	ACAGCGATGAACGATTTCGT+TGG	-	chr4.2:9407467-9407486	None:intergenic	45.0%
	AGAAGGAGGAGATTTAGCGA+CGG	+	chr4.2:9408072-9408091	MS.gene58098:CDS	45.0%
	AGATGGTGAAAAATCCACCG+GGG	+	chr4.2:9407885-9407904	MS.gene58098:CDS	45.0%
	ATCGGTTGAGGTTTCCTGAT+CGG	-	chr4.2:9407663-9407682	None:intergenic	45.0%
	CAGATGGTGAAAAATCCACC+GGG	+	chr4.2:9407884-9407903	MS.gene58098:CDS	45.0%
	CGATTCTTCAACGAAACCAC+CGG	-	chr4.2:9407770-9407789	None:intergenic	45.0%
	TTCCTGATCGGGGAAATTGA+CGG	-	chr4.2:9407651-9407670	None:intergenic	45.0%
	TTTGCATTCTCTCTCCTCCT+TGG	+	chr4.2:9407569-9407588	MS.gene58098:CDS	45.0%
!	TCGATTTGAGCGGTTCAGAT+TGG	-	chr4.2:9407538-9407557	None:intergenic	45.0%
!!	TGGAAACGGTGTTGCATTGT+CGG	+	chr4.2:9407799-9407818	MS.gene58098:CDS	45.0%
	AAAAATCCACCGGGGAAACC+AGG	+	chr4.2:9407893-9407912	MS.gene58098:CDS	50.0%
	AAAGTTGCTGCTGCTGTTCC+TGG	+	chr4.2:9408190-9408209	MS.gene58098:CDS	50.0%
	AAGTTGCTGCTGCTGTTCCT+GGG	+	chr4.2:9408191-9408210	MS.gene58098:CDS	50.0%
	AGATTGGAGCGAAAGGACCA+AGG	-	chr4.2:9407589-9407608	None:intergenic	50.0%
	ATCATCCGATCTGCGTTGCT+TGG	-	chr4.2:9407723-9407742	None:intergenic	50.0%
	CAACCGATGAGGATGATTCC+AGG	+	chr4.2:9407675-9407694	MS.gene58098:CDS	50.0%
	CAGATCCAAGCAACGCAGAT+CGG	+	chr4.2:9407715-9407734	MS.gene58098:CDS	50.0%
	CCGAAGTTCCTGTATCAGTC+CGG	+	chr4.2:9407404-9407423	MS.gene58098:CDS	50.0%
	CCGGACTGATACAGGAACTT+CGG	-	chr4.2:9407407-9407426	None:intergenic	50.0%
	CTGGTAAGGCTGTGATTCAG+TGG	-	chr4.2:9407441-9407460	None:intergenic	50.0%
	GAAGGAGGAGATTTAGCGAC+GGG	+	chr4.2:9408073-9408092	MS.gene58098:CDS	50.0%
	GGAAATTGACGGCATGACCA+CGG	-	chr4.2:9407640-9407659	None:intergenic	50.0%
	GGGTTTCGGACTGCAAAATC+TGG	+	chr4.2:9408259-9408278	MS.gene58098:CDS	50.0%
	TCAGGAAACCTCAACCGATG+AGG	+	chr4.2:9407664-9407683	MS.gene58098:CDS	50.0%
	TCGGTTGAGGTTTCCTGATC+GGG	-	chr4.2:9407662-9407681	None:intergenic	50.0%
	TTCGCTCCAATCTCCATCAC+CGG	+	chr4.2:9407596-9407615	MS.gene58098:CDS	50.0%
!	CAAGCTGCTTTCGATTTCCC+AGG	-	chr4.2:9408211-9408230	None:intergenic	50.0%
!	GGAATCATCCTCATCGGTTG+AGG	-	chr4.2:9407675-9407694	None:intergenic	50.0%
!	GTGATGGAGATTGGAGCGAA+AGG	-	chr4.2:9407596-9407615	None:intergenic	50.0%
!!	AAACGGTGTTGCATTGTCGG+CGG	+	chr4.2:9407802-9407821	MS.gene58098:CDS	50.0%
!!!	GCGCTGCTGAGATTTTTTCC+TGG	-	chr4.2:9407696-9407715	None:intergenic	50.0%
	CGGTTGAGGTTTCCTGATCG+GGG	-	chr4.2:9407661-9407680	None:intergenic	55.0%
	GGAGAAGGAATGGAACGACG+AGG	+	chr4.2:9407841-9407860	MS.gene58098:CDS	55.0%
	TGCCGTCAATTTCCCCGATC+AGG	+	chr4.2:9407646-9407665	MS.gene58098:CDS	55.0%
	TGGAGGAGGAGGAGAAGGAA+TGG	+	chr4.2:9407831-9407850	MS.gene58098:CDS	55.0%
	TTGGAGCGAAAGGACCAAGG+AGG	-	chr4.2:9407586-9407605	None:intergenic	55.0%
	AGGCTGTGATTCAGTGGCCG+CGG	-	chr4.2:9407435-9407454	None:intergenic	60.0%
	ATCCACCGGGGAAACCAGGA+CGG	+	chr4.2:9407897-9407916	MS.gene58098:CDS	60.0%
	CTCTGTAGTAGCTCCAGCGC+CGG	+	chr4.2:9407748-9407767	MS.gene58098:CDS	60.0%
	GCGTCACAAGGTGGAAAGCG+TGG	+	chr4.2:9407949-9407968	MS.gene58098:CDS	60.0%
	GCTCCAATCTCCATCACCGG+TGG	+	chr4.2:9407599-9407618	MS.gene58098:CDS	60.0%
	TTCAACGAAACCACCGGCGC+TGG	-	chr4.2:9407764-9407783	None:intergenic	60.0%
!!	ATTCGGAGGGCGTCACAAGG+TGG	+	chr4.2:9407940-9407959	MS.gene58098:CDS	60.0%
!!	CGATAGCGGAGGCATTCGGA+GGG	+	chr4.2:9407927-9407946	MS.gene58098:CDS	60.0%
!!	GAGGCGATAGCGGAGGCATT+CGG	+	chr4.2:9407923-9407942	MS.gene58098:CDS	60.0%
!!	TCGCCACCGGTGATGGAGAT+TGG	-	chr4.2:9407605-9407624	None:intergenic	60.0%
	ACCGGGGAAACCAGGACGGT+GGG	+	chr4.2:9407901-9407920	MS.gene58098:CDS	65.0%
	ACCGGTGGCGATTCCCGTGT+CGG	+	chr4.2:9407614-9407633	MS.gene58098:CDS	65.0%
	ACGGGAATCGCCACCGGTGA+TGG	-	chr4.2:9407612-9407631	None:intergenic	65.0%
	AGGACGGTGGGAGGCGATAG+CGG	+	chr4.2:9407913-9407932	MS.gene58098:CDS	65.0%
	CGGGTGCACCGGACTGATAC+AGG	-	chr4.2:9407415-9407434	None:intergenic	65.0%
	GGCTGTGATTCAGTGGCCGC+GGG	-	chr4.2:9407434-9407453	None:intergenic	65.0%
	GTATCAGTCCGGTGCACCCG+CGG	+	chr4.2:9407415-9407434	MS.gene58098:CDS	65.0%
	TCCCACCGTCCTGGTTTCCC+CGG	-	chr4.2:9407905-9407924	None:intergenic	65.0%
	TGTTGCATTGTCGGCGGCGG+TGG	+	chr4.2:9407808-9407827	MS.gene58098:CDS	65.0%
!	CGGCGCTGGAGCTACTACAG+AGG	-	chr4.2:9407750-9407769	None:intergenic	65.0%
!	TGTAGTAGCTCCAGCGCCGG+TGG	+	chr4.2:9407751-9407770	MS.gene58098:CDS	65.0%
!!	CGGTGTTGCATTGTCGGCGG+CGG	+	chr4.2:9407805-9407824	MS.gene58098:CDS	65.0%
!!	GCGATAGCGGAGGCATTCGG+AGG	+	chr4.2:9407926-9407945	MS.gene58098:CDS	65.0%
!!	GGCATTCGGAGGGCGTCACA+AGG	+	chr4.2:9407937-9407956	MS.gene58098:CDS	65.0%
!!	GGTGGTGGAGGAGGAGGAGA+AGG	+	chr4.2:9407826-9407845	MS.gene58098:CDS	65.0%
	CACCGGGGAAACCAGGACGG+TGG	+	chr4.2:9407900-9407919	MS.gene58098:CDS	70.0%
	CACCGTCCTGGTTTCCCCGG+TGG	-	chr4.2:9407902-9407921	None:intergenic	70.0%
	CGGCATGACCACGGCCGACA+CGG	-	chr4.2:9407631-9407650	None:intergenic	70.0%
	GCCGACACGGGAATCGCCAC+CGG	-	chr4.2:9407618-9407637	None:intergenic	70.0%
	GCTATCGCCTCCCACCGTCC+TGG	-	chr4.2:9407914-9407933	None:intergenic	70.0%
	GGCATGACCACGGCCGACAC+GGG	-	chr4.2:9407630-9407649	None:intergenic	70.0%
	GGGGAAACCAGGACGGTGGG+AGG	+	chr4.2:9407904-9407923	MS.gene58098:CDS	70.0%
	TGCATTGTCGGCGGCGGTGG+TGG	+	chr4.2:9407811-9407830	MS.gene58098:CDS	70.0%
	TTCAGTGGCCGCGGGTGCAC+CGG	-	chr4.2:9407426-9407445	None:intergenic	70.0%
!	ACGGTGGGAGGCGATAGCGG+AGG	+	chr4.2:9407916-9407935	MS.gene58098:CDS	70.0%
!	ATTGTCGGCGGCGGTGGTGG+AGG	+	chr4.2:9407814-9407833	MS.gene58098:CDS	70.0%
!	GGCGATTCCCGTGTCGGCCG+TGG	+	chr4.2:9407620-9407639	MS.gene58098:CDS	75.0%
!!!	GGCGGCGGTGGTGGAGGAGG+AGG	+	chr4.2:9407820-9407839	MS.gene58098:CDS	80.0%
!!!	GTCGGCGGCGGTGGTGGAGG+AGG	+	chr4.2:9407817-9407836	MS.gene58098:CDS	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	9407377	9408294	9407377	ID=MS.gene58098
chr4.2	mRNA	9407377	9408294	9407377	ID=MS.gene58098.t1;Parent=MS.gene58098
chr4.2	exon	9407377	9408294	9407377	ID=MS.gene58098.t1.exon1;Parent=MS.gene58098.t1
chr4.2	CDS	9407377	9408294	9407377	ID=cds.MS.gene58098.t1;Parent=MS.gene58098.t1

Gene Sequence

>MS.gene58098

ATGGAATTCTTAGACGAAGACGCGAAACCGAAGTTCCTGTATCAGTCCGGTGCACCCGCGGCCACTGAATCACAGCCTTACCAGAAACCAACGAAATCGTTCATCGCTGTAACCGTTTCAATCTCTTCAATCTTCTTCGCTCTCGCTTTCTTCGTGTTCCAATCTGAACCGCTCAAATCGATTTTCATCTGGTTTGCATTCTCTCTCCTCCTTGGTCCTTTCGCTCCAATCTCCATCACCGGTGGCGATTCCCGTGTCGGCCGTGGTCATGCCGTCAATTTCCCCGATCAGGAAACCTCAACCGATGAGGATGATTCCAGGAAAAAATCTCAGCAGCGCAGATCCAAGCAACGCAGATCGGATGATGTCACCTCTGTAGTAGCTCCAGCGCCGGTGGTTTCGTTGAAGAATCGAAATGGAAATGGAAACGGTGTTGCATTGTCGGCGGCGGTGGTGGAGGAGGAGGAGAAGGAATGGAACGACGAGGACATTGAGATTCTGAAGAAACAGATGGTGAAAAATCCACCGGGGAAACCAGGACGGTGGGAGGCGATAGCGGAGGCATTCGGAGGGCGTCACAAGGTGGAAAGCGTGGTGAAGAAATCAAAGGAGTTGGGAGAGAAGAAGGTTGATGATTCGGATTCGTATGAGCAGTTTCTGAAGAAGAGAAAAGCGTTGGATAAGAGACTTGTTGAAGAAGGAGGAGATTTAGCGACGGGTGAGAAAGTTGAAAGTGTTTGGAGTTCAAACGAGGATATTGCTTTGTTGAATGCTTTGAAAGCATTTCCGAAAGATGTTGCTATGAGATGGGAGAAAGTTGCTGCTGCTGTTCCTGGGAAATCGAAAGCAGCTTGTATGAAAAGAATTGCAGAATTGAAGAAAGGGTTTCGGACTGCAAAATCTGGTTCTGAAGTTTAG

Protein sequence

>MS.gene58098.t1

MEFLDEDAKPKFLYQSGAPAATESQPYQKPTKSFIAVTVSISSIFFALAFFVFQSEPLKSIFIWFAFSLLLGPFAPISITGGDSRVGRGHAVNFPDQETSTDEDDSRKKSQQRRSKQRRSDDVTSVVAPAPVVSLKNRNGNGNGVALSAAVVEEEEKEWNDEDIEILKKQMVKNPPGKPGRWEAIAEAFGGRHKVESVVKKSKELGEKKVDDSDSYEQFLKKRKALDKRLVEEGGDLATGEKVESVWSSNEDIALLNALKAFPKDVAMRWEKVAAAVPGKSKAACMKRIAELKKGFRTAKSGSEV