Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056880.t1 | AFK46273.1 | 94.6 | 280 | 15 | 0 | 1 | 280 | 1 | 280 | 3.00E-139 | 504.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056880.t1 | I3T181 | 94.6 | 280 | 15 | 0 | 1 | 280 | 1 | 280 | 2.1e-139 | 504.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053420 | MS.gene056880 | 0.802355 | 5.83E-49 | -1.69E-46 |
| MS.gene055202 | MS.gene056880 | 0.824029 | 1.01E-53 | -1.69E-46 |
| MS.gene056311 | MS.gene056880 | 0.800606 | 1.33E-48 | -1.69E-46 |
| MS.gene056880 | MS.gene24491 | 0.818196 | 2.22E-52 | -1.69E-46 |
| MS.gene056880 | MS.gene35440 | 0.808084 | 3.69E-50 | -1.69E-46 |
| MS.gene056880 | MS.gene46106 | 0.814019 | 1.91E-51 | -1.69E-46 |
| MS.gene056880 | MS.gene89261 | 0.801485 | 8.81E-49 | -1.69E-46 |
| MS.gene056880 | MS.gene89320 | 0.808709 | 2.71E-50 | -1.69E-46 |
| MS.gene056880 | MS.gene89803 | 0.813608 | 2.35E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056880.t1 | MTR_1g059890 | 96.786 | 280 | 9 | 0 | 1 | 280 | 1 | 280 | 0.0 | 549 |
| MS.gene056880.t1 | MTR_7g104725 | 43.226 | 310 | 121 | 13 | 3 | 280 | 1 | 287 | 3.52e-49 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056880.t1 | AT2G36220 | 36.177 | 293 | 136 | 11 | 1 | 274 | 1 | 261 | 2.47e-30 | 115 |
| MS.gene056880.t1 | AT3G52710 | 35.976 | 328 | 107 | 18 | 1 | 269 | 1 | 284 | 1.10e-29 | 114 |
Find 78 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGCGGAGTTAGGGTTTA+TGG | 0.148476 | 1.1:-45658044 | None:intergenic |
| TTGGTTCGCAAGCGACTTTC+CGG | 0.232258 | 1.1:-45657901 | None:intergenic |
| CACAGTGAACCGGCCGGTTT+GGG | 0.244338 | 1.1:+45658592 | MS.gene056880:CDS |
| TGAGAGTTTGAAGCGGAGTT+AGG | 0.333425 | 1.1:-45658052 | None:intergenic |
| TCACAGTGAACCGGCCGGTT+TGG | 0.337046 | 1.1:+45658591 | MS.gene056880:CDS |
| AACGTAGCTTTCTGTGATTT+CGG | 0.349811 | 1.1:-45658127 | None:intergenic |
| GGGGCGGCGGTCCGAGTCAT+GGG | 0.355455 | 1.1:+45658636 | MS.gene056880:CDS |
| ACTCACCACCGGAATCATTC+TGG | 0.363382 | 1.1:+45657939 | MS.gene056880:CDS |
| GGAAACAACCTCGTGTTTCC+CGG | 0.372036 | 1.1:-45658187 | None:intergenic |
| ACCGCCGCCCCGACGCAAAC+CGG | 0.376641 | 1.1:-45658624 | None:intergenic |
| CGGGGCGGCGGTCCGAGTCA+TGG | 0.386264 | 1.1:+45658635 | MS.gene056880:CDS |
| CGCCGGATAAGGCGGAAACT+AGG | 0.395537 | 1.1:-45657868 | None:intergenic |
| ACTCAAAGAAAGAAGAAAAC+TGG | 0.400989 | 1.1:+45658406 | MS.gene056880:CDS |
| TCGCCGAAGGTTTCTTGTAT+AGG | 0.403972 | 1.1:+45658265 | MS.gene056880:CDS |
| TCGATGAGCCGGTTTGCGTC+GGG | 0.405928 | 1.1:+45658616 | MS.gene056880:CDS |
| TCCACCGGAAGATTCGATTT+CGG | 0.409789 | 1.1:-45658484 | None:intergenic |
| ACCCTAGTTTCCGCCTTATC+CGG | 0.413514 | 1.1:+45657866 | MS.gene056880:CDS |
| GTCGGCGGCAACGCCGGATA+AGG | 0.415027 | 1.1:-45657879 | None:intergenic |
| CCGATCGACGCACTTCGTTT+CGG | 0.421050 | 1.1:-45658208 | None:intergenic |
| TTCGATGAGCCGGTTTGCGT+CGG | 0.422675 | 1.1:+45658615 | MS.gene056880:CDS |
| CCGGTTTGGGTTCGATGAGC+CGG | 0.433092 | 1.1:+45658605 | MS.gene056880:CDS |
| TTAGAGAGCCAGAATGATTC+CGG | 0.442874 | 1.1:-45657947 | None:intergenic |
| CAAGAAACCTTCGGCGAAGA+AGG | 0.455115 | 1.1:-45658259 | None:intergenic |
| GCCGGTTTGCGTCGGGGCGG+CGG | 0.460288 | 1.1:+45658623 | MS.gene056880:CDS |
| CCGGCTCATCGAACCCAAAC+CGG | 0.463824 | 1.1:-45658605 | None:intergenic |
| TATCCGGCGTTGCCGCCGAC+CGG | 0.472326 | 1.1:+45657882 | MS.gene056880:CDS |
| GCCGGATAAGGCGGAAACTA+GGG | 0.475520 | 1.1:-45657867 | None:intergenic |
| GAGAGTTTGAAGCGGAGTTA+GGG | 0.479960 | 1.1:-45658051 | None:intergenic |
| GGCAGCGGAGACGCCGGTAG+CGG | 0.484213 | 1.1:-45658353 | None:intergenic |
| TTTCCGGTCGGCGGCAACGC+CGG | 0.485958 | 1.1:-45657885 | None:intergenic |
| TGTTCCGAAATCGAATCTTC+CGG | 0.502511 | 1.1:+45658480 | MS.gene056880:CDS |
| TCGATTTCTTCCACCGCTAC+CGG | 0.504664 | 1.1:+45658340 | MS.gene056880:CDS |
| GCTACCGGCGTCTCCGCTGC+CGG | 0.507701 | 1.1:+45658355 | MS.gene056880:CDS |
| CTGTCTTACAACGCCGGCAG+CGG | 0.516489 | 1.1:-45658368 | None:intergenic |
| TTCGTTGAAGAATCTTCCAC+CGG | 0.530549 | 1.1:-45658499 | None:intergenic |
| GAGTCTTCCGCCTCATCAGT+TGG | 0.531012 | 1.1:-45657920 | None:intergenic |
| TGATTCGTTTCTTTCGTAGA+CGG | 0.541509 | 1.1:-45658002 | None:intergenic |
| GAGTAGGACGGTTGAAGAGA+CGG | 0.543360 | 1.1:+45658567 | MS.gene056880:CDS |
| TCAAAAGCTACGACAATCAT+CGG | 0.554027 | 1.1:+45658100 | MS.gene056880:CDS |
| TTCACCTACTCCCCATGACT+CGG | 0.557110 | 1.1:-45658647 | None:intergenic |
| AGCGGAGACGCCGGTAGCGG+TGG | 0.558353 | 1.1:-45658350 | None:intergenic |
| CGTCGGAATCATCACAAGCC+GGG | 0.559044 | 1.1:+45658169 | MS.gene056880:CDS |
| CTACCTATACAAGAAACCTT+CGG | 0.563783 | 1.1:-45658268 | None:intergenic |
| AACGCCGGCAGCGGAGACGC+CGG | 0.571035 | 1.1:-45658359 | None:intergenic |
| AGAGACGGTTCACAGTGAAC+CGG | 0.571066 | 1.1:+45658582 | MS.gene056880:CDS |
| TTCGCAAGCGACTTTCCGGT+CGG | 0.571303 | 1.1:-45657897 | None:intergenic |
| CGGTCCGAGTCATGGGGAGT+AGG | 0.577370 | 1.1:+45658643 | MS.gene056880:CDS |
| CCGTCGGAATCATCACAAGC+CGG | 0.577564 | 1.1:+45658168 | MS.gene056880:CDS |
| ACGAAGAAGAAGAGAAACAA+TGG | 0.589286 | 1.1:+45658517 | MS.gene056880:CDS |
| GGCGGCAACGCCGGATAAGG+CGG | 0.589432 | 1.1:-45657876 | None:intergenic |
| CTCATCGAACCCAAACCGGC+CGG | 0.591441 | 1.1:-45658601 | None:intergenic |
| ACGACGCTGAATACGACTGG+TGG | 0.592186 | 1.1:+45657969 | MS.gene056880:CDS |
| CCGAAACGAAGTGCGTCGAT+CGG | 0.602094 | 1.1:+45658208 | MS.gene056880:CDS |
| CTAACGACGCTGAATACGAC+TGG | 0.603633 | 1.1:+45657966 | MS.gene056880:CDS |
| GCAAGCGACTTTCCGGTCGG+CGG | 0.604992 | 1.1:-45657894 | None:intergenic |
| GGGCGGCGGTCCGAGTCATG+GGG | 0.607070 | 1.1:+45658637 | MS.gene056880:CDS |
| CGATGAGCCGGTTTGCGTCG+GGG | 0.607545 | 1.1:+45658617 | MS.gene056880:CDS |
| AAACGAAGTGCGTCGATCGG+AGG | 0.610287 | 1.1:+45658211 | MS.gene056880:CDS |
| CGACGCTGAATACGACTGGT+GGG | 0.619893 | 1.1:+45657970 | MS.gene056880:CDS |
| GCTACGTTAGCAGAAGCTAG+AGG | 0.623845 | 1.1:+45658142 | MS.gene056880:CDS |
| CGCTTGCGAACCAACTGATG+AGG | 0.624098 | 1.1:+45657910 | MS.gene056880:CDS |
| CCGGCTTGTGATGATTCCGA+CGG | 0.625963 | 1.1:-45658168 | None:intergenic |
| GGGAAGGAAGTACGGTGAGT+AGG | 0.628019 | 1.1:+45658551 | MS.gene056880:CDS |
| TTGCGAACCAACTGATGAGG+CGG | 0.641142 | 1.1:+45657913 | MS.gene056880:CDS |
| AGATTTCTGTCTTACAACGC+CGG | 0.641306 | 1.1:-45658374 | None:intergenic |
| GAATCGTTGAGAGTTTGAAG+CGG | 0.651586 | 1.1:-45658059 | None:intergenic |
| ACGGTTCACAGTGAACCGGC+CGG | 0.657233 | 1.1:+45658586 | MS.gene056880:CDS |
| AGGAAGTACGGTGAGTAGGA+CGG | 0.657574 | 1.1:+45658555 | MS.gene056880:CDS |
| CGAAACGTGGACATAATCGA+AGG | 0.662504 | 1.1:+45658299 | MS.gene056880:CDS |
| CAGAAGCTAGAGGCTGCCGT+CGG | 0.668462 | 1.1:+45658152 | MS.gene056880:CDS |
| TCCGAAATCGAATCTTCCGG+TGG | 0.683823 | 1.1:+45658483 | MS.gene056880:CDS |
| TGAGCCGGTTTGCGTCGGGG+CGG | 0.691949 | 1.1:+45658620 | MS.gene056880:CDS |
| AGGGTTTCGAAATCTAGTTG+TGG | 0.692327 | 1.1:-45657848 | None:intergenic |
| TGAGGCGGAAGACTCACCAC+CGG | 0.696003 | 1.1:+45657928 | MS.gene056880:CDS |
| ATCACAAGCCGGGAAACACG+AGG | 0.698693 | 1.1:+45658179 | MS.gene056880:CDS |
| GAGAGCCAGAATGATTCCGG+TGG | 0.708692 | 1.1:-45657944 | None:intergenic |
| GCAGCCACCGAATTCACACG+TGG | 0.735786 | 1.1:-45658678 | None:intergenic |
| GGTAGAGTGAGATCGAAACG+TGG | 0.747418 | 1.1:+45658286 | MS.gene056880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATTTCTTCAAATTCT+TGG | - | chr1.1:45658086-45658105 | None:intergenic | 20.0% |
| ACTCAAAGAAAGAAGAAAAC+TGG | + | chr1.1:45658406-45658425 | MS.gene056880:CDS | 30.0% | |
| AAACAATGGAAGAAAAACGC+GGG | + | chr1.1:45658531-45658550 | MS.gene056880:CDS | 35.0% | |
| AACGTAGCTTTCTGTGATTT+CGG | - | chr1.1:45658130-45658149 | None:intergenic | 35.0% | |
| ACGAAGAAGAAGAGAAACAA+TGG | + | chr1.1:45658517-45658536 | MS.gene056880:CDS | 35.0% | |
| CTACCTATACAAGAAACCTT+CGG | - | chr1.1:45658271-45658290 | None:intergenic | 35.0% | |
| GAAACAATGGAAGAAAAACG+CGG | + | chr1.1:45658530-45658549 | MS.gene056880:CDS | 35.0% | |
| TCAAAAGCTACGACAATCAT+CGG | + | chr1.1:45658100-45658119 | MS.gene056880:CDS | 35.0% | |
| TGATTCGTTTCTTTCGTAGA+CGG | - | chr1.1:45658005-45658024 | None:intergenic | 35.0% | |
| AGATTTCTGTCTTACAACGC+CGG | - | chr1.1:45658377-45658396 | None:intergenic | 40.0% | |
| AGGGTTTCGAAATCTAGTTG+TGG | - | chr1.1:45657851-45657870 | None:intergenic | 40.0% | |
| GAATCGTTGAGAGTTTGAAG+CGG | - | chr1.1:45658062-45658081 | None:intergenic | 40.0% | |
| TGTTCCGAAATCGAATCTTC+CGG | + | chr1.1:45658480-45658499 | MS.gene056880:CDS | 40.0% | |
| TTAGAGAGCCAGAATGATTC+CGG | - | chr1.1:45657950-45657969 | None:intergenic | 40.0% | |
| TTCGTTGAAGAATCTTCCAC+CGG | - | chr1.1:45658502-45658521 | None:intergenic | 40.0% | |
| AAAAACGCGGGAAGGAAGTA+CGG | + | chr1.1:45658543-45658562 | MS.gene056880:CDS | 45.0% | |
| AATGGAAGAAAAACGCGGGA+AGG | + | chr1.1:45658535-45658554 | MS.gene056880:CDS | 45.0% | |
| CGAAACGTGGACATAATCGA+AGG | + | chr1.1:45658299-45658318 | MS.gene056880:CDS | 45.0% | |
| TCCACCGGAAGATTCGATTT+CGG | - | chr1.1:45658487-45658506 | None:intergenic | 45.0% | |
| TCGCCGAAGGTTTCTTGTAT+AGG | + | chr1.1:45658265-45658284 | MS.gene056880:CDS | 45.0% | |
| TGAAGCGGAGTTAGGGTTTA+TGG | - | chr1.1:45658047-45658066 | None:intergenic | 45.0% | |
| ! | GAGAGTTTGAAGCGGAGTTA+GGG | - | chr1.1:45658054-45658073 | None:intergenic | 45.0% |
| ! | TCGGAACAGTTTTCTCTCTC+CGG | - | chr1.1:45658468-45658487 | None:intergenic | 45.0% |
| ! | TGAGAGTTTGAAGCGGAGTT+AGG | - | chr1.1:45658055-45658074 | None:intergenic | 45.0% |
| ! | TTTTGAACCTTCTTCGCCGA+AGG | + | chr1.1:45658252-45658271 | MS.gene056880:CDS | 45.0% |
| !! | AAAGCGTTTGCGCGATTTTC+AGG | + | chr1.1:45658437-45658456 | MS.gene056880:CDS | 45.0% |
| ACCCTAGTTTCCGCCTTATC+CGG | + | chr1.1:45657866-45657885 | MS.gene056880:CDS | 50.0% | |
| ACTCACCACCGGAATCATTC+TGG | + | chr1.1:45657939-45657958 | MS.gene056880:CDS | 50.0% | |
| AGAGACGGTTCACAGTGAAC+CGG | + | chr1.1:45658582-45658601 | MS.gene056880:CDS | 50.0% | |
| CAAGAAACCTTCGGCGAAGA+AGG | - | chr1.1:45658262-45658281 | None:intergenic | 50.0% | |
| CTAACGACGCTGAATACGAC+TGG | + | chr1.1:45657966-45657985 | MS.gene056880:CDS | 50.0% | |
| GAGTAGGACGGTTGAAGAGA+CGG | + | chr1.1:45658567-45658586 | MS.gene056880:CDS | 50.0% | |
| GCTACGTTAGCAGAAGCTAG+AGG | + | chr1.1:45658142-45658161 | MS.gene056880:CDS | 50.0% | |
| GGAAACAACCTCGTGTTTCC+CGG | - | chr1.1:45658190-45658209 | None:intergenic | 50.0% | |
| GGTAGAGTGAGATCGAAACG+TGG | + | chr1.1:45658286-45658305 | MS.gene056880:CDS | 50.0% | |
| TCCGAAATCGAATCTTCCGG+TGG | + | chr1.1:45658483-45658502 | MS.gene056880:CDS | 50.0% | |
| TCGATTTCTTCCACCGCTAC+CGG | + | chr1.1:45658340-45658359 | MS.gene056880:CDS | 50.0% | |
| TTCACCTACTCCCCATGACT+CGG | - | chr1.1:45658650-45658669 | None:intergenic | 50.0% | |
| TTGCGAACCAACTGATGAGG+CGG | + | chr1.1:45657913-45657932 | MS.gene056880:CDS | 50.0% | |
| ! | AGGAAGTACGGTGAGTAGGA+CGG | + | chr1.1:45658555-45658574 | MS.gene056880:CDS | 50.0% |
| ! | TTGGTTCGCAAGCGACTTTC+CGG | - | chr1.1:45657904-45657923 | None:intergenic | 50.0% |
| ACGACGCTGAATACGACTGG+TGG | + | chr1.1:45657969-45657988 | MS.gene056880:CDS | 55.0% | |
| ATCACAAGCCGGGAAACACG+AGG | + | chr1.1:45658179-45658198 | MS.gene056880:CDS | 55.0% | |
| CCGATCGACGCACTTCGTTT+CGG | - | chr1.1:45658211-45658230 | None:intergenic | 55.0% | |
| CCGTCGGAATCATCACAAGC+CGG | + | chr1.1:45658168-45658187 | MS.gene056880:CDS | 55.0% | |
| CGACGCTGAATACGACTGGT+GGG | + | chr1.1:45657970-45657989 | MS.gene056880:CDS | 55.0% | |
| CGCTTGCGAACCAACTGATG+AGG | + | chr1.1:45657910-45657929 | MS.gene056880:CDS | 55.0% | |
| CGTCGGAATCATCACAAGCC+GGG | + | chr1.1:45658169-45658188 | MS.gene056880:CDS | 55.0% | |
| GAGAGCCAGAATGATTCCGG+TGG | - | chr1.1:45657947-45657966 | None:intergenic | 55.0% | |
| GAGTCTTCCGCCTCATCAGT+TGG | - | chr1.1:45657923-45657942 | None:intergenic | 55.0% | |
| GCCGGATAAGGCGGAAACTA+GGG | - | chr1.1:45657870-45657889 | None:intergenic | 55.0% | |
| TTCGCAAGCGACTTTCCGGT+CGG | - | chr1.1:45657900-45657919 | None:intergenic | 55.0% | |
| ! | AAACGAAGTGCGTCGATCGG+AGG | + | chr1.1:45658211-45658230 | MS.gene056880:CDS | 55.0% |
| ! | CCGAAACGAAGTGCGTCGAT+CGG | + | chr1.1:45658208-45658227 | MS.gene056880:CDS | 55.0% |
| ! | CCGGCTTGTGATGATTCCGA+CGG | - | chr1.1:45658171-45658190 | None:intergenic | 55.0% |
| ! | GGGAAGGAAGTACGGTGAGT+AGG | + | chr1.1:45658551-45658570 | MS.gene056880:CDS | 55.0% |
| !! | GCGCGATTTTCAGGAGTCAC+CGG | + | chr1.1:45658446-45658465 | MS.gene056880:CDS | 55.0% |
| !! | TTCGATGAGCCGGTTTGCGT+CGG | + | chr1.1:45658615-45658634 | MS.gene056880:CDS | 55.0% |
| ACGGTTCACAGTGAACCGGC+CGG | + | chr1.1:45658586-45658605 | MS.gene056880:CDS | 60.0% | |
| CAGAAGCTAGAGGCTGCCGT+CGG | + | chr1.1:45658152-45658171 | MS.gene056880:CDS | 60.0% | |
| CCGGCTCATCGAACCCAAAC+CGG | - | chr1.1:45658608-45658627 | None:intergenic | 60.0% | |
| CGCCGGATAAGGCGGAAACT+AGG | - | chr1.1:45657871-45657890 | None:intergenic | 60.0% | |
| CTCATCGAACCCAAACCGGC+CGG | - | chr1.1:45658604-45658623 | None:intergenic | 60.0% | |
| CTGTCTTACAACGCCGGCAG+CGG | - | chr1.1:45658371-45658390 | None:intergenic | 60.0% | |
| TCACAGTGAACCGGCCGGTT+TGG | + | chr1.1:45658591-45658610 | MS.gene056880:CDS | 60.0% | |
| TGAGGCGGAAGACTCACCAC+CGG | + | chr1.1:45657928-45657947 | MS.gene056880:CDS | 60.0% | |
| ! | CACAGTGAACCGGCCGGTTT+GGG | + | chr1.1:45658592-45658611 | MS.gene056880:CDS | 60.0% |
| !! | CCGGTTTGGGTTCGATGAGC+CGG | + | chr1.1:45658605-45658624 | MS.gene056880:CDS | 60.0% |
| !! | TCGATGAGCCGGTTTGCGTC+GGG | + | chr1.1:45658616-45658635 | MS.gene056880:CDS | 60.0% |
| CGGTCCGAGTCATGGGGAGT+AGG | + | chr1.1:45658643-45658662 | MS.gene056880:CDS | 65.0% | |
| GCAAGCGACTTTCCGGTCGG+CGG | - | chr1.1:45657897-45657916 | None:intergenic | 65.0% | |
| !! | CGATGAGCCGGTTTGCGTCG+GGG | + | chr1.1:45658617-45658636 | MS.gene056880:CDS | 65.0% |
| GGCGGCAACGCCGGATAAGG+CGG | - | chr1.1:45657879-45657898 | None:intergenic | 70.0% | |
| GTCGGCGGCAACGCCGGATA+AGG | - | chr1.1:45657882-45657901 | None:intergenic | 70.0% | |
| TATCCGGCGTTGCCGCCGAC+CGG | + | chr1.1:45657882-45657901 | MS.gene056880:CDS | 70.0% | |
| TTTCCGGTCGGCGGCAACGC+CGG | - | chr1.1:45657888-45657907 | None:intergenic | 70.0% | |
| !! | TGAGCCGGTTTGCGTCGGGG+CGG | + | chr1.1:45658620-45658639 | MS.gene056880:CDS | 70.0% |
| AACGCCGGCAGCGGAGACGC+CGG | - | chr1.1:45658362-45658381 | None:intergenic | 75.0% | |
| ACCGCCGCCCCGACGCAAAC+CGG | - | chr1.1:45658627-45658646 | None:intergenic | 75.0% | |
| GCTACCGGCGTCTCCGCTGC+CGG | + | chr1.1:45658355-45658374 | MS.gene056880:CDS | 75.0% | |
| GGCAGCGGAGACGCCGGTAG+CGG | - | chr1.1:45658356-45658375 | None:intergenic | 75.0% | |
| GGGCGGCGGTCCGAGTCATG+GGG | + | chr1.1:45658637-45658656 | MS.gene056880:CDS | 75.0% | |
| GGGGCGGCGGTCCGAGTCAT+GGG | + | chr1.1:45658636-45658655 | MS.gene056880:CDS | 75.0% | |
| ! | AGCGGAGACGCCGGTAGCGG+TGG | - | chr1.1:45658353-45658372 | None:intergenic | 75.0% |
| ! | CGGGGCGGCGGTCCGAGTCA+TGG | + | chr1.1:45658635-45658654 | MS.gene056880:CDS | 80.0% |
| !!! | GCCGGTTTGCGTCGGGGCGG+CGG | + | chr1.1:45658623-45658642 | MS.gene056880:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 45657845 | 45658687 | 45657845 | ID=MS.gene056880 |
| chr1.1 | mRNA | 45657845 | 45658687 | 45657845 | ID=MS.gene056880.t1;Parent=MS.gene056880 |
| chr1.1 | exon | 45657845 | 45658687 | 45657845 | ID=MS.gene056880.t1.exon1;Parent=MS.gene056880.t1 |
| chr1.1 | CDS | 45657845 | 45658687 | 45657845 | ID=cds.MS.gene056880.t1;Parent=MS.gene056880.t1 |
| Gene Sequence |
| Protein sequence |
