Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05712.t1 | XP_003600425.1 | 98.9 | 476 | 5 | 0 | 1 | 476 | 1 | 476 | 4.50E-273 | 949.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05712.t1 | O65583 | 84.2 | 467 | 72 | 2 | 4 | 468 | 3 | 469 | 1.4e-230 | 800.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05712.t1 | G7IY62 | 98.9 | 476 | 5 | 0 | 1 | 476 | 1 | 476 | 3.3e-273 | 949.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05712 | MS.gene057694 | 0.800355 | 1.50E-48 | -1.69E-46 |
| MS.gene05712 | MS.gene064937 | 0.804701 | 1.90E-49 | -1.69E-46 |
| MS.gene05712 | MS.gene08049 | 0.965211 | 2.60E-124 | -1.69E-46 |
| MS.gene05712 | MS.gene21553 | 0.813686 | 2.26E-51 | -1.69E-46 |
| MS.gene05712 | MS.gene38569 | 0.80695 | 6.41E-50 | -1.69E-46 |
| MS.gene05712 | MS.gene43992 | 0.804832 | 1.79E-49 | -1.69E-46 |
| MS.gene05712 | MS.gene71215 | 0.802364 | 5.81E-49 | -1.69E-46 |
| MS.gene05712 | MS.gene95233 | 0.808007 | 3.83E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene040387 | MS.gene05712 | PPI |
| MS.gene05712 | MS.gene79193 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05712.t1 | MTR_3g061030 | 98.950 | 476 | 5 | 0 | 1 | 476 | 1 | 476 | 0.0 | 968 |
| MS.gene05712.t1 | MTR_5g096660 | 85.381 | 472 | 66 | 2 | 3 | 471 | 2 | 473 | 0.0 | 840 |
| MS.gene05712.t1 | MTR_3g061030 | 99.268 | 410 | 3 | 0 | 67 | 476 | 1 | 410 | 0.0 | 833 |
| MS.gene05712.t1 | MTR_7g029450 | 74.895 | 474 | 112 | 3 | 1 | 467 | 1 | 474 | 0.0 | 730 |
| MS.gene05712.t1 | MTR_4g103620 | 73.742 | 457 | 105 | 3 | 13 | 467 | 10 | 453 | 0.0 | 692 |
| MS.gene05712.t1 | MTR_6g021580 | 41.622 | 185 | 99 | 4 | 32 | 215 | 21 | 197 | 5.62e-39 | 142 |
| MS.gene05712.t1 | MTR_8g069865 | 30.726 | 179 | 113 | 4 | 50 | 226 | 67 | 236 | 7.51e-17 | 84.0 |
| MS.gene05712.t1 | MTR_4g073890 | 29.609 | 179 | 115 | 4 | 50 | 226 | 91 | 260 | 3.57e-15 | 78.6 |
| MS.gene05712.t1 | MTR_4g073890 | 29.609 | 179 | 115 | 4 | 50 | 226 | 91 | 260 | 4.79e-15 | 77.8 |
| MS.gene05712.t1 | MTR_4g020090 | 26.733 | 202 | 144 | 4 | 268 | 465 | 80 | 281 | 7.68e-15 | 75.1 |
| MS.gene05712.t1 | MTR_4g112790 | 30.168 | 179 | 114 | 4 | 50 | 226 | 72 | 241 | 9.21e-15 | 77.4 |
| MS.gene05712.t1 | MTR_4g112790 | 30.168 | 179 | 114 | 4 | 50 | 226 | 72 | 241 | 1.28e-14 | 76.6 |
| MS.gene05712.t1 | MTR_5g027530 | 26.582 | 158 | 115 | 1 | 105 | 262 | 137 | 293 | 5.62e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05712.t1 | AT4G26510 | 84.154 | 467 | 72 | 2 | 4 | 468 | 3 | 469 | 0.0 | 814 |
| MS.gene05712.t1 | AT4G26510 | 84.154 | 467 | 72 | 2 | 4 | 468 | 3 | 469 | 0.0 | 814 |
| MS.gene05712.t1 | AT4G26510 | 84.154 | 467 | 72 | 2 | 4 | 468 | 3 | 469 | 0.0 | 814 |
| MS.gene05712.t1 | AT4G26510 | 84.154 | 467 | 72 | 2 | 4 | 468 | 3 | 469 | 0.0 | 814 |
| MS.gene05712.t1 | AT1G55810 | 81.876 | 469 | 78 | 3 | 3 | 468 | 2 | 466 | 0.0 | 794 |
| MS.gene05712.t1 | AT1G55810 | 81.876 | 469 | 78 | 3 | 3 | 468 | 2 | 466 | 0.0 | 794 |
| MS.gene05712.t1 | AT1G55810 | 81.876 | 469 | 78 | 3 | 3 | 468 | 2 | 466 | 0.0 | 794 |
| MS.gene05712.t1 | AT1G55810 | 78.208 | 491 | 78 | 4 | 3 | 468 | 2 | 488 | 0.0 | 782 |
| MS.gene05712.t1 | AT1G55810 | 78.208 | 491 | 78 | 4 | 3 | 468 | 2 | 488 | 0.0 | 782 |
| MS.gene05712.t1 | AT1G55810 | 80.810 | 469 | 78 | 4 | 3 | 468 | 2 | 461 | 0.0 | 778 |
| MS.gene05712.t1 | AT1G55810 | 81.659 | 458 | 72 | 4 | 14 | 468 | 3 | 451 | 0.0 | 769 |
| MS.gene05712.t1 | AT3G27190 | 74.120 | 483 | 109 | 4 | 1 | 467 | 1 | 483 | 0.0 | 729 |
| MS.gene05712.t1 | AT5G40870 | 73.045 | 486 | 115 | 3 | 1 | 470 | 1 | 486 | 0.0 | 724 |
| MS.gene05712.t1 | AT3G27440 | 74.246 | 431 | 110 | 1 | 38 | 467 | 19 | 449 | 0.0 | 678 |
| MS.gene05712.t1 | AT3G27440 | 74.876 | 402 | 100 | 1 | 67 | 467 | 1 | 402 | 0.0 | 640 |
| MS.gene05712.t1 | AT3G27440 | 74.611 | 386 | 97 | 1 | 38 | 422 | 19 | 404 | 0.0 | 602 |
| MS.gene05712.t1 | AT1G26190 | 30.726 | 179 | 113 | 4 | 50 | 226 | 67 | 236 | 2.83e-17 | 85.1 |
| MS.gene05712.t1 | AT1G26190 | 31.285 | 179 | 112 | 4 | 50 | 226 | 67 | 236 | 3.15e-17 | 84.3 |
| MS.gene05712.t1 | AT1G26190 | 30.726 | 179 | 113 | 4 | 50 | 226 | 67 | 236 | 3.40e-17 | 84.7 |
| MS.gene05712.t1 | AT1G26190 | 30.726 | 179 | 113 | 4 | 50 | 226 | 67 | 236 | 3.81e-17 | 84.3 |
| MS.gene05712.t1 | AT1G26190 | 30.726 | 179 | 113 | 4 | 50 | 226 | 67 | 236 | 5.17e-17 | 84.0 |
| MS.gene05712.t1 | AT1G73980 | 32.402 | 179 | 110 | 5 | 50 | 226 | 67 | 236 | 2.19e-15 | 79.3 |
| MS.gene05712.t1 | AT1G73980 | 32.402 | 179 | 110 | 5 | 50 | 226 | 67 | 236 | 2.19e-15 | 79.3 |
| MS.gene05712.t1 | AT1G73980 | 32.402 | 179 | 110 | 5 | 50 | 226 | 67 | 236 | 2.19e-15 | 79.3 |
| MS.gene05712.t1 | AT1G26190 | 33.582 | 134 | 86 | 2 | 95 | 226 | 8 | 140 | 3.99e-14 | 75.1 |
| MS.gene05712.t1 | AT3G53900 | 26.108 | 203 | 146 | 4 | 268 | 466 | 24 | 226 | 9.28e-14 | 71.2 |
| MS.gene05712.t1 | AT3G53900 | 26.108 | 203 | 146 | 4 | 268 | 466 | 89 | 291 | 3.18e-13 | 70.9 |
| MS.gene05712.t1 | AT1G32060 | 29.944 | 177 | 120 | 3 | 50 | 226 | 70 | 242 | 4.52e-13 | 71.2 |
Find 88 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTCAGATGTTATAATTT+TGG | 0.148585 | 3.2:+52007573 | MS.gene05712:CDS |
| TAAGTCAGCTGTTGATTTAA+TGG | 0.276355 | 3.2:+52005306 | MS.gene05712:CDS |
| CGAGGAATTGCTTCGTGTTA+TGG | 0.284513 | 3.2:+52007270 | MS.gene05712:CDS |
| GAATGAATGACATATAAATT+TGG | 0.284658 | 3.2:-52008585 | None:intergenic |
| CATACCACATGTACACCTTT+AGG | 0.293979 | 3.2:-52010186 | None:intergenic |
| GCGAGTTGTGCTTGTTAATC+AGG | 0.300317 | 3.2:+52006487 | MS.gene05712:CDS |
| ACCTTTACAGCATGCTCTTA+AGG | 0.337060 | 3.2:-52009644 | None:intergenic |
| TAATTTCAGTGGGGAGAGTA+TGG | 0.342371 | 3.2:+52009615 | MS.gene05712:intron |
| AAGTCAGCTGTTGATTTAAT+GGG | 0.361494 | 3.2:+52005307 | MS.gene05712:CDS |
| TTTCCACGATCCTCGTGTTC+GGG | 0.372455 | 3.2:+52007609 | MS.gene05712:CDS |
| TCTCCGAACTCGCCCATTCC+CGG | 0.380699 | 3.2:-52010282 | None:intergenic |
| TGCTGTAAAGGTATTAAGAT+TGG | 0.386732 | 3.2:+52009655 | MS.gene05712:CDS |
| TGCCTTTCTGAGATATCGTT+TGG | 0.387639 | 3.2:-52009823 | None:intergenic |
| CAGGTTGTAGAACATGGTTT+GGG | 0.398829 | 3.2:+52008855 | MS.gene05712:intron |
| ATATCGGCATATTTCTTTGT+TGG | 0.406744 | 3.2:-52008465 | None:intergenic |
| ATATCAGTTGCTGATGTTGT+TGG | 0.410405 | 3.2:-52005403 | None:intergenic |
| TCAGGTTGTAGAACATGGTT+TGG | 0.415714 | 3.2:+52008854 | MS.gene05712:intron |
| TCCACGAGGTATGATGATAT+CGG | 0.428819 | 3.2:-52008481 | None:intergenic |
| TAACTCTTGAAGTCATACTT+TGG | 0.432602 | 3.2:-52007325 | None:intergenic |
| GTGACATCTGAGATAGAGAT+TGG | 0.433285 | 3.2:+52010234 | MS.gene05712:CDS |
| TTCTGATCGTTTGATTCGAT+TGG | 0.434269 | 3.2:+52008754 | MS.gene05712:CDS |
| ATACCGGGAATGGGCGAGTT+CGG | 0.435058 | 3.2:+52010279 | MS.gene05712:CDS |
| TCCAAAATTATAACATCTGA+AGG | 0.442172 | 3.2:-52007574 | None:intergenic |
| TACAACCAACCTTTCGTCAT+AGG | 0.445494 | 3.2:+52005427 | MS.gene05712:CDS |
| GATTTCTTTACTTATACAAA+AGG | 0.447550 | 3.2:+52009986 | MS.gene05712:CDS |
| TTCGTTTGGCAAGAAGGATC+AGG | 0.449737 | 3.2:+52008044 | MS.gene05712:CDS |
| GTTGCTGGTGGTGCAGCATC+CGG | 0.457285 | 3.2:+52006419 | MS.gene05712:CDS |
| TATCGTGTCATACCGGGAAT+GGG | 0.459400 | 3.2:+52010270 | MS.gene05712:CDS |
| GCTGTAAAGGTATTAAGATT+GGG | 0.459445 | 3.2:+52009656 | MS.gene05712:CDS |
| AGAAGGTGACAATGGTCAAC+AGG | 0.460710 | 3.2:+52009696 | MS.gene05712:CDS |
| TGCAGATGCTGATGTTCGTT+TGG | 0.464075 | 3.2:+52008030 | MS.gene05712:intron |
| TTACTGTTGGACCCTATCCT+TGG | 0.467327 | 3.2:+52009850 | MS.gene05712:CDS |
| TTATAATTTCAGGCTCCTAA+AGG | 0.470278 | 3.2:+52010171 | MS.gene05712:intron |
| TGAAGATTATCGTGTCATAC+CGG | 0.473745 | 3.2:+52010263 | MS.gene05712:CDS |
| CACGAGGATCGTGGAAAACA+AGG | 0.475686 | 3.2:-52007603 | None:intergenic |
| TTATCGTGTCATACCGGGAA+TGG | 0.479665 | 3.2:+52010269 | MS.gene05712:CDS |
| ACAAAAGTGATGCGTTAAGA+AGG | 0.484391 | 3.2:+52007347 | MS.gene05712:CDS |
| CTGATGTTCGTTTGGCAAGA+AGG | 0.491742 | 3.2:+52008038 | MS.gene05712:CDS |
| CTTGATCAGGTTGTAGAACA+TGG | 0.496475 | 3.2:+52008849 | MS.gene05712:intron |
| CATGAACCTGTGCCAAGGAT+AGG | 0.496913 | 3.2:-52009862 | None:intergenic |
| AGCGAGAAGGATCGGGACAT+TGG | 0.503321 | 3.2:+52008076 | MS.gene05712:CDS |
| GCCTTAAGAGCATGCTGTAA+AGG | 0.510977 | 3.2:+52009643 | MS.gene05712:CDS |
| CAGCACATCCGCACAAAGCT+TGG | 0.511983 | 3.2:+52008537 | MS.gene05712:CDS |
| GATTACAACTTTGATCATCC+TGG | 0.515812 | 3.2:+52006870 | MS.gene05712:CDS |
| TGATACCAGCGAGAAGGATC+GGG | 0.516168 | 3.2:+52008069 | MS.gene05712:CDS |
| GAGATTAAGAAATATGATGT+TGG | 0.522890 | 3.2:-52010021 | None:intergenic |
| GAGTTCGGAGATCGGTACTT+TGG | 0.525316 | 3.2:+52010294 | MS.gene05712:CDS |
| ATGAACCTGTGCCAAGGATA+GGG | 0.525822 | 3.2:-52009861 | None:intergenic |
| GTGATACCAGCGAGAAGGAT+CGG | 0.526363 | 3.2:+52008068 | MS.gene05712:CDS |
| ATTTCTTTACTTATACAAAA+GGG | 0.541370 | 3.2:+52009987 | MS.gene05712:CDS |
| GTAGTGGTTGCTTCACAGTA+AGG | 0.547142 | 3.2:+52010336 | MS.gene05712:CDS |
| AGAAATATGATGTTGGACTC+TGG | 0.555877 | 3.2:-52010014 | None:intergenic |
| TTGGACCCTATCCTTGGCAC+AGG | 0.556021 | 3.2:+52009856 | MS.gene05712:CDS |
| GAATGGGCGAGTTCGGAGAT+CGG | 0.557304 | 3.2:+52010286 | MS.gene05712:CDS |
| AGAATGAAGTCATCAAAAGC+TGG | 0.564855 | 3.2:-52008441 | None:intergenic |
| TTACAATAACTTGACTGAGG+AGG | 0.569168 | 3.2:+52006830 | MS.gene05712:CDS |
| AGAAAGGCACGTGTTACTGT+TGG | 0.578877 | 3.2:+52009837 | MS.gene05712:CDS |
| GACCATTGTCACCTTCTCTG+TGG | 0.583645 | 3.2:-52009690 | None:intergenic |
| CAAAAGTGATGCGTTAAGAA+GGG | 0.584050 | 3.2:+52007348 | MS.gene05712:CDS |
| GATTAACAAGCACAACTCGC+TGG | 0.584484 | 3.2:-52006484 | None:intergenic |
| ATGAAGATATTTGTTGACAC+AGG | 0.586048 | 3.2:+52007643 | MS.gene05712:CDS |
| GAAGATTATCGTGTCATACC+GGG | 0.599530 | 3.2:+52010264 | MS.gene05712:CDS |
| AATGTCCCGATCCTTCTCGC+TGG | 0.600283 | 3.2:-52008074 | None:intergenic |
| ACACACCTATGACGAAAGGT+TGG | 0.603399 | 3.2:-52005432 | None:intergenic |
| AAATGCAGGTTCTGTATACA+CGG | 0.605115 | 3.2:+52009051 | MS.gene05712:intron |
| CATAACACGAAGCAATTCCT+CGG | 0.607036 | 3.2:-52007269 | None:intergenic |
| CCAAAATTATAACATCTGAA+GGG | 0.611028 | 3.2:-52007573 | None:intergenic |
| ACTGTCATGAACCTGTGCCA+AGG | 0.615431 | 3.2:-52009867 | None:intergenic |
| ACTCCCGAACACGAGGATCG+TGG | 0.615840 | 3.2:-52007612 | None:intergenic |
| TGCCAAACGATATCTCAGAA+AGG | 0.623532 | 3.2:+52009821 | MS.gene05712:CDS |
| GAAAACACACCTATGACGAA+AGG | 0.624653 | 3.2:-52005436 | None:intergenic |
| AGGTTCTGTATACACGGGTG+TGG | 0.626553 | 3.2:+52009057 | MS.gene05712:intron |
| CAGGCGTGATACCAGCGAGA+AGG | 0.627099 | 3.2:+52008063 | MS.gene05712:CDS |
| GTTATGGACAAGTTGAAGCA+TGG | 0.627582 | 3.2:+52007286 | MS.gene05712:CDS |
| GGCTCCTAAAGGTGTACATG+TGG | 0.628140 | 3.2:+52010182 | MS.gene05712:intron |
| AAGCAAGTGATCACTCCCAC+CGG | 0.630745 | 3.2:+52008897 | MS.gene05712:CDS |
| CATGTTGACCAAGCTTTGTG+CGG | 0.634982 | 3.2:-52008545 | None:intergenic |
| ATCCACAGAGAAGGTGACAA+TGG | 0.641587 | 3.2:+52009688 | MS.gene05712:CDS |
| GCCGATATCATCATACCTCG+TGG | 0.642641 | 3.2:+52008480 | MS.gene05712:CDS |
| GTGGTGTCTCTGTCATCAGA+AGG | 0.646781 | 3.2:+52009098 | MS.gene05712:CDS |
| TTCATCAACTCCCGAACACG+AGG | 0.650470 | 3.2:-52007619 | None:intergenic |
| AGATGATGATGAACAAGTAG+TGG | 0.657572 | 3.2:+52010320 | MS.gene05712:CDS |
| AATGCAGGTTCTGTATACAC+GGG | 0.676003 | 3.2:+52009052 | MS.gene05712:intron |
| AGGTTGTAGAACATGGTTTG+GGG | 0.676716 | 3.2:+52008856 | MS.gene05712:intron |
| GATATCATCATACCTCGTGG+AGG | 0.736631 | 3.2:+52008483 | MS.gene05712:CDS |
| ATTGCTGCTATGCAGATACG+GGG | 0.767252 | 3.2:+52008677 | MS.gene05712:intron |
| TCGTGGAGGAGATAATCACG+TGG | 0.786879 | 3.2:+52008497 | MS.gene05712:CDS |
| ACGTGATTATCTCCTCCACG+AGG | 0.810543 | 3.2:-52008495 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTTGTAAAAATTTAAAA+CGG | - | chr3.2:52006352-52006371 | None:intergenic | 10.0% |
| !! | AAAAATTGAAAAATAAAGCA+TGG | - | chr3.2:52008287-52008306 | None:intergenic | 15.0% |
| !! | AAAATTGAAAAATAAAGCAT+GGG | - | chr3.2:52008286-52008305 | None:intergenic | 15.0% |
| !! | ATGATATTTACAACTTAAAA+CGG | - | chr3.2:52007405-52007424 | None:intergenic | 15.0% |
| !! | ATTTCTTTACTTATACAAAA+GGG | + | chr3.2:52009987-52010006 | MS.gene05712:CDS | 15.0% |
| !! | CAATAAAAAATATGAACTAA+AGG | - | chr3.2:52007680-52007699 | None:intergenic | 15.0% |
| !! | CATAAAAAAATTTCATTTCT+AGG | + | chr3.2:52009945-52009964 | MS.gene05712:intron | 15.0% |
| !!! | AAAATATTAGGTTTTTAGAT+TGG | - | chr3.2:52005627-52005646 | None:intergenic | 15.0% |
| !!! | ATTTATTTATCTATTTTTGC+AGG | + | chr3.2:52006395-52006414 | MS.gene05712:intron | 15.0% |
| !!! | CTAGAAATGAAATTTTTTTA+TGG | - | chr3.2:52009947-52009966 | None:intergenic | 15.0% |
| !!! | GCTTTATTTTTCAATTTTTT+GGG | + | chr3.2:52008288-52008307 | MS.gene05712:intron | 15.0% |
| !!! | TAGCATATGTTAATTTTATA+TGG | + | chr3.2:52007834-52007853 | MS.gene05712:intron | 15.0% |
| !!! | TATGATTTTCTTATAATTTC+AGG | + | chr3.2:52010161-52010180 | MS.gene05712:intron | 15.0% |
| !!! | TATTTTCTCTTTTTTTTGTT+TGG | + | chr3.2:52007005-52007024 | MS.gene05712:intron | 15.0% |
| !!! | TGCTTTATTTTTCAATTTTT+TGG | + | chr3.2:52008287-52008306 | MS.gene05712:intron | 15.0% |
| !!! | TTAATTTCATAATGTTGATT+TGG | + | chr3.2:52008232-52008251 | MS.gene05712:intron | 15.0% |
| !! | AAAACGGCTAAAAAAAAAAA+AGG | - | chr3.2:52007389-52007408 | None:intergenic | 20.0% |
| !! | AAACGAAAAATAAGACAAAA+AGG | - | chr3.2:52006710-52006729 | None:intergenic | 20.0% |
| !! | AAATTAACATATGCTATGTA+TGG | - | chr3.2:52007830-52007849 | None:intergenic | 20.0% |
| !! | AAGAAGTGATATAATCAATA+TGG | - | chr3.2:52008189-52008208 | None:intergenic | 20.0% |
| !! | AATTATGAATGTATTAGTTG+AGG | + | chr3.2:52007111-52007130 | MS.gene05712:intron | 20.0% |
| !! | AGAAGTGATATAATCAATAT+GGG | - | chr3.2:52008188-52008207 | None:intergenic | 20.0% |
| !! | CACGTTAAAACAAAATAAAA+TGG | - | chr3.2:52007541-52007560 | None:intergenic | 20.0% |
| !! | GAATGAATGACATATAAATT+TGG | - | chr3.2:52008588-52008607 | None:intergenic | 20.0% |
| !! | GATTTCTTTACTTATACAAA+AGG | + | chr3.2:52009986-52010005 | MS.gene05712:CDS | 20.0% |
| !! | TATGAACTAAAGGAAATAAA+AGG | - | chr3.2:52007670-52007689 | None:intergenic | 20.0% |
| !! | TGTACTTATATTGATACTTT+AGG | + | chr3.2:52006770-52006789 | MS.gene05712:intron | 20.0% |
| !! | TTTACTTATTGAACTATTCA+AGG | - | chr3.2:52009478-52009497 | None:intergenic | 20.0% |
| !!! | AATTTGGATATATTTTACAC+AGG | - | chr3.2:52008572-52008591 | None:intergenic | 20.0% |
| !!! | ATTAATTTTATTTCATCTCG+CGG | + | chr3.2:52007748-52007767 | MS.gene05712:intron | 20.0% |
| !!! | CTAAAAACCTAATATTTTGT+AGG | + | chr3.2:52005629-52005648 | MS.gene05712:intron | 20.0% |
| !!! | TATTCTTTATCAGATTTTGA+CGG | + | chr3.2:52008351-52008370 | MS.gene05712:intron | 20.0% |
| !!! | TTTGTCTTATTTTTCGTTTT+TGG | + | chr3.2:52006711-52006730 | MS.gene05712:intron | 20.0% |
| ! | AAAGAAAATATTGTGCTTGA+AGG | + | chr3.2:52009495-52009514 | MS.gene05712:intron | 25.0% |
| ! | AAATAAGACAAAAAGGAAGA+AGG | - | chr3.2:52006703-52006722 | None:intergenic | 25.0% |
| ! | AAGTGATATAATCAATATGG+GGG | - | chr3.2:52008186-52008205 | None:intergenic | 25.0% |
| ! | AATAAGACAAAAAGGAAGAA+GGG | - | chr3.2:52006702-52006721 | None:intergenic | 25.0% |
| ! | AATATTCCTCTAATTTCAGT+GGG | + | chr3.2:52009605-52009624 | MS.gene05712:intron | 25.0% |
| ! | ACAAAATCAAAATGAACTCA+TGG | - | chr3.2:52008152-52008171 | None:intergenic | 25.0% |
| ! | ACAACAATATAAAACCTAGA+AGG | - | chr3.2:52005850-52005869 | None:intergenic | 25.0% |
| ! | ACCAAAATTCATTTACTTGA+AGG | - | chr3.2:52008383-52008402 | None:intergenic | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+AGG | + | chr3.2:52009429-52009448 | MS.gene05712:intron | 25.0% |
| ! | ATAATATCCTGAAAATTGAC+AGG | + | chr3.2:52007148-52007167 | MS.gene05712:intron | 25.0% |
| ! | ATATGTATGCAAGCATATAA+AGG | - | chr3.2:52009736-52009755 | None:intergenic | 25.0% |
| ! | ATCATAATGTAACCAATCAA+AGG | - | chr3.2:52010147-52010166 | None:intergenic | 25.0% |
| ! | CAATATAAGTACAATAAGAC+AGG | - | chr3.2:52006763-52006782 | None:intergenic | 25.0% |
| ! | CATAATCTCATCTCATAAAT+AGG | + | chr3.2:52006081-52006100 | MS.gene05712:intron | 25.0% |
| ! | CATATCTATGCTTCATTTAT+TGG | + | chr3.2:52009751-52009770 | MS.gene05712:intron | 25.0% |
| ! | CCAAAATTATAACATCTGAA+GGG | - | chr3.2:52007576-52007595 | None:intergenic | 25.0% |
| ! | CCAATGAATAAGAAATAAAG+AGG | - | chr3.2:52007046-52007065 | None:intergenic | 25.0% |
| ! | CTTAGTTCCTACAAAATATT+AGG | - | chr3.2:52005639-52005658 | None:intergenic | 25.0% |
| ! | GAAGTGATATAATCAATATG+GGG | - | chr3.2:52008187-52008206 | None:intergenic | 25.0% |
| ! | GAGATTAAGAAATATGATGT+TGG | - | chr3.2:52010024-52010043 | None:intergenic | 25.0% |
| ! | TAATATTCCTCTAATTTCAG+TGG | + | chr3.2:52009604-52009623 | MS.gene05712:intron | 25.0% |
| ! | TATAATTTCACATCTTAGCA+AGG | - | chr3.2:52009540-52009559 | None:intergenic | 25.0% |
| ! | TCCAAAATTATAACATCTGA+AGG | - | chr3.2:52007577-52007596 | None:intergenic | 25.0% |
| ! | TGATATGCACTAAAAAAGAA+AGG | - | chr3.2:52007439-52007458 | None:intergenic | 25.0% |
| ! | TGTTTCTCAAAATGATCATT+GGG | + | chr3.2:52006573-52006592 | MS.gene05712:intron | 25.0% |
| ! | TTACTTAGCATTTAATATGC+AGG | + | chr3.2:52006179-52006198 | MS.gene05712:intron | 25.0% |
| ! | TTAGTATTTCAACAATGACA+CGG | - | chr3.2:52007976-52007995 | None:intergenic | 25.0% |
| !! | AATATTTTGTAGGAACTAAG+AGG | + | chr3.2:52005639-52005658 | MS.gene05712:intron | 25.0% |
| !! | ATACATTCATAATTTGTCTG+TGG | - | chr3.2:52007105-52007124 | None:intergenic | 25.0% |
| !! | CCTCTTTATTTCTTATTCAT+TGG | + | chr3.2:52007043-52007062 | MS.gene05712:intron | 25.0% |
| !! | GAGATTTTATTACATCGAAT+TGG | - | chr3.2:52005894-52005913 | None:intergenic | 25.0% |
| !! | TCAGATGTTATAATTTTGGA+AGG | + | chr3.2:52007577-52007596 | MS.gene05712:CDS | 25.0% |
| !! | TCCTTCAAGTAAATGAATTT+TGG | + | chr3.2:52008379-52008398 | MS.gene05712:intron | 25.0% |
| !! | TTAAGAAGGGTATATATCTT+TGG | + | chr3.2:52007361-52007380 | MS.gene05712:intron | 25.0% |
| !! | TTGTTTCTCAAAATGATCAT+TGG | + | chr3.2:52006572-52006591 | MS.gene05712:intron | 25.0% |
| !! | TTTTTACAATAACTTGACTG+AGG | + | chr3.2:52006827-52006846 | MS.gene05712:CDS | 25.0% |
| !!! | CTTCTACTTATTTTATAAGC+CGG | + | chr3.2:52007942-52007961 | MS.gene05712:intron | 25.0% |
| !!! | GATGTCACTATTTTAATTCT+TGG | - | chr3.2:52010222-52010241 | None:intergenic | 25.0% |
| AAAAACAATCACATTGCAGA+GGG | - | chr3.2:52010096-52010115 | None:intergenic | 30.0% | |
| AAAGTTACCATGTTGAAACA+TGG | - | chr3.2:52009018-52009037 | None:intergenic | 30.0% | |
| AAGCATGGGTTTCATTATTA+AGG | - | chr3.2:52008272-52008291 | None:intergenic | 30.0% | |
| AATGACTTCATTACTACTTG+GGG | - | chr3.2:52005474-52005493 | None:intergenic | 30.0% | |
| AATTCAAACTGGTCAATACT+TGG | - | chr3.2:52009187-52009206 | None:intergenic | 30.0% | |
| AGATACTTAGATAGTTAGAG+AGG | + | chr3.2:52005725-52005744 | MS.gene05712:intron | 30.0% | |
| AGCATATGATATTGTTGAAG+AGG | - | chr3.2:52006662-52006681 | None:intergenic | 30.0% | |
| AGTGATATAATCAATATGGG+GGG | - | chr3.2:52008185-52008204 | None:intergenic | 30.0% | |
| AGTTAACTACTTAACATGAC+AGG | + | chr3.2:52006800-52006819 | MS.gene05712:intron | 30.0% | |
| ATAAATACAGAAGAGCGAAA+CGG | + | chr3.2:52005769-52005788 | MS.gene05712:intron | 30.0% | |
| ATATCGGCATATTTCTTTGT+TGG | - | chr3.2:52008468-52008487 | None:intergenic | 30.0% | |
| ATATTCCTCTAATTTCAGTG+GGG | + | chr3.2:52009606-52009625 | MS.gene05712:intron | 30.0% | |
| ATCATACATGATAAGATCCT+AGG | + | chr3.2:52006307-52006326 | MS.gene05712:intron | 30.0% | |
| ATGAAGAAGAGAAAAACACA+TGG | - | chr3.2:52008980-52008999 | None:intergenic | 30.0% | |
| ATGTTTCAACATGGTAACTT+TGG | + | chr3.2:52009017-52009036 | MS.gene05712:intron | 30.0% | |
| ATTTGTACCATGTTTCAACA+TGG | + | chr3.2:52009008-52009027 | MS.gene05712:intron | 30.0% | |
| CAAATAAGTCCAATTCAAAC+TGG | - | chr3.2:52009198-52009217 | None:intergenic | 30.0% | |
| CAATGACTTCATTACTACTT+GGG | - | chr3.2:52005475-52005494 | None:intergenic | 30.0% | |
| CGGCTTATAAAATAAGTAGA+AGG | - | chr3.2:52007944-52007963 | None:intergenic | 30.0% | |
| CTATCACTTTCTAAATTGTG+TGG | + | chr3.2:52008799-52008818 | MS.gene05712:intron | 30.0% | |
| CTCAAAAATCAAGTACGAAA+AGG | - | chr3.2:52008932-52008951 | None:intergenic | 30.0% | |
| CTTAAATTATGCACTTGATC+AGG | + | chr3.2:52008836-52008855 | MS.gene05712:intron | 30.0% | |
| GCTTAAAATAATCGCTTAAC+AGG | - | chr3.2:52006225-52006244 | None:intergenic | 30.0% | |
| GTTTCTCAAAATGATCATTG+GGG | + | chr3.2:52006574-52006593 | MS.gene05712:intron | 30.0% | |
| TAACTCTTGAAGTCATACTT+TGG | - | chr3.2:52007328-52007347 | None:intergenic | 30.0% | |
| TACGAAAAGGAAATGATTAC+CGG | - | chr3.2:52008919-52008938 | None:intergenic | 30.0% | |
| TCAATGACTTCATTACTACT+TGG | - | chr3.2:52005476-52005495 | None:intergenic | 30.0% | |
| TTATAATTTCAGGCTCCTAA+AGG | + | chr3.2:52010171-52010190 | MS.gene05712:intron | 30.0% | |
| TTTCTCAAAATGATCATTGG+GGG | + | chr3.2:52006575-52006594 | MS.gene05712:intron | 30.0% | |
| ! | AAAATAAGTAGAAGGTACAC+AGG | - | chr3.2:52007936-52007955 | None:intergenic | 30.0% |
| ! | AATTTTCCTACATCACATTG+TGG | - | chr3.2:52007799-52007818 | None:intergenic | 30.0% |
| ! | ACGAAAAAAAGTCCACATTT+TGG | - | chr3.2:52007069-52007088 | None:intergenic | 30.0% |
| ! | ATGAAGATATTTGTTGACAC+AGG | + | chr3.2:52007643-52007662 | MS.gene05712:CDS | 30.0% |
| ! | CCCTTCAGATGTTATAATTT+TGG | + | chr3.2:52007573-52007592 | MS.gene05712:CDS | 30.0% |
| ! | TTGTTTTCATAAGCTACTCT+GGG | - | chr3.2:52009323-52009342 | None:intergenic | 30.0% |
| !! | AAAATTTTGATCCACAGAGA+AGG | + | chr3.2:52009679-52009698 | MS.gene05712:CDS | 30.0% |
| !! | AAACTGACTTGTAAAGTAAC+TGG | - | chr3.2:52005586-52005605 | None:intergenic | 30.0% |
| !! | AAGTATTGACCAGTTTGAAT+TGG | + | chr3.2:52009186-52009205 | MS.gene05712:intron | 30.0% |
| !! | AAGTCAGCTGTTGATTTAAT+GGG | + | chr3.2:52005307-52005326 | MS.gene05712:CDS | 30.0% |
| !! | ATCACTTCTTTTCAAGACTT+GGG | + | chr3.2:52008199-52008218 | MS.gene05712:intron | 30.0% |
| !! | ATCACTTGCTTTTCTGTAAA+TGG | - | chr3.2:52008888-52008907 | None:intergenic | 30.0% |
| !! | CTTTACAAGTCAGTTTTGTA+AGG | + | chr3.2:52005590-52005609 | MS.gene05712:intron | 30.0% |
| !! | GCTGTAAAGGTATTAAGATT+GGG | + | chr3.2:52009656-52009675 | MS.gene05712:CDS | 30.0% |
| !! | TAAGTCAGCTGTTGATTTAA+TGG | + | chr3.2:52005306-52005325 | MS.gene05712:CDS | 30.0% |
| !! | TATCACTTCTTTTCAAGACT+TGG | + | chr3.2:52008198-52008217 | MS.gene05712:intron | 30.0% |
| !! | TCATTTTTCTGGATTTCACA+TGG | + | chr3.2:52005345-52005364 | MS.gene05712:CDS | 30.0% |
| !! | TGCTGTAAAGGTATTAAGAT+TGG | + | chr3.2:52009655-52009674 | MS.gene05712:CDS | 30.0% |
| !!! | ATCACAAACTGTTTTTTTGC+CGG | - | chr3.2:52006441-52006460 | None:intergenic | 30.0% |
| !!! | TCTTCTGAAGTTCATTTTTC+TGG | + | chr3.2:52005334-52005353 | MS.gene05712:CDS | 30.0% |
| !!! | TTTTGTTTTAACGTGTCTTC+AGG | + | chr3.2:52007546-52007565 | MS.gene05712:intron | 30.0% |
| AAAAGGAAATGATTACCGGT+GGG | - | chr3.2:52008915-52008934 | None:intergenic | 35.0% | |
| AAATGCAGGTTCTGTATACA+CGG | + | chr3.2:52009051-52009070 | MS.gene05712:intron | 35.0% | |
| ACAAAAGTGATGCGTTAAGA+AGG | + | chr3.2:52007347-52007366 | MS.gene05712:CDS | 35.0% | |
| ACTCAAAGTCTGCAAGAAAA+TGG | - | chr3.2:52008624-52008643 | None:intergenic | 35.0% | |
| AGAAATATGATGTTGGACTC+TGG | - | chr3.2:52010017-52010036 | None:intergenic | 35.0% | |
| AGAATGAAGTCATCAAAAGC+TGG | - | chr3.2:52008444-52008463 | None:intergenic | 35.0% | |
| ATAGTTAGAGAGGATAGGTA+CGG | + | chr3.2:52005735-52005754 | MS.gene05712:intron | 35.0% | |
| ATATCAGTTGCTGATGTTGT+TGG | - | chr3.2:52005406-52005425 | None:intergenic | 35.0% | |
| ATATGCTATGTATGGAGAGA+AGG | - | chr3.2:52007822-52007841 | None:intergenic | 35.0% | |
| CAAAAGTGATGCGTTAAGAA+GGG | + | chr3.2:52007348-52007367 | MS.gene05712:CDS | 35.0% | |
| CATAATCCACAATGTGATGT+AGG | + | chr3.2:52007790-52007809 | MS.gene05712:intron | 35.0% | |
| CTTAGATAGTTAGAGAGGAT+AGG | + | chr3.2:52005730-52005749 | MS.gene05712:intron | 35.0% | |
| CTTATTCATTGGCCAAAATG+TGG | + | chr3.2:52007054-52007073 | MS.gene05712:intron | 35.0% | |
| CTTTCTATTCATACACATCG+TGG | + | chr3.2:52006519-52006538 | MS.gene05712:intron | 35.0% | |
| GAAAAACAATCACATTGCAG+AGG | - | chr3.2:52010097-52010116 | None:intergenic | 35.0% | |
| GAAAATAGACACAGGATTTG+AGG | - | chr3.2:52010067-52010086 | None:intergenic | 35.0% | |
| GAGGTGATAGAGATCATAAA+TGG | + | chr3.2:52005658-52005677 | MS.gene05712:intron | 35.0% | |
| GATTACAACTTTGATCATCC+TGG | + | chr3.2:52006870-52006889 | MS.gene05712:CDS | 35.0% | |
| GGAGATATGTTTCAGAGTTA+GGG | + | chr3.2:52006732-52006751 | MS.gene05712:intron | 35.0% | |
| TAATTGCTGCTATGCAGATA+CGG | + | chr3.2:52008675-52008694 | MS.gene05712:intron | 35.0% | |
| TCAATTCAGCAAAGACACTT+CGG | - | chr3.2:52009455-52009474 | None:intergenic | 35.0% | |
| TCTTTGAATGTAGTTCACAC+AGG | + | chr3.2:52005924-52005943 | MS.gene05712:intron | 35.0% | |
| TGAAGATTATCGTGTCATAC+CGG | + | chr3.2:52010263-52010282 | MS.gene05712:CDS | 35.0% | |
| TGGAGATATGTTTCAGAGTT+AGG | + | chr3.2:52006731-52006750 | MS.gene05712:intron | 35.0% | |
| TTACAATAACTTGACTGAGG+AGG | + | chr3.2:52006830-52006849 | MS.gene05712:CDS | 35.0% | |
| TTTATTTCATCTCGCGGAAT+TGG | + | chr3.2:52007754-52007773 | MS.gene05712:intron | 35.0% | |
| ! | AAAACACATGGAGACAGTTT+TGG | - | chr3.2:52008968-52008987 | None:intergenic | 35.0% |
| ! | ACATCACATTGTGGATTATG+AGG | - | chr3.2:52007790-52007809 | None:intergenic | 35.0% |
| ! | AGATGATGATGAACAAGTAG+TGG | + | chr3.2:52010320-52010339 | MS.gene05712:CDS | 35.0% |
| ! | AGGTGTGTTTTCTTATGACA+AGG | + | chr3.2:52005447-52005466 | MS.gene05712:intron | 35.0% |
| ! | CAAGCATATAAAGGTACAGA+TGG | - | chr3.2:52009727-52009746 | None:intergenic | 35.0% |
| ! | GAAGAATAATTGTACTGACC+AGG | - | chr3.2:52006891-52006910 | None:intergenic | 35.0% |
| ! | GATTTTTGTAAGAGGTTGTG+TGG | + | chr3.2:52009079-52009098 | MS.gene05712:CDS | 35.0% |
| ! | GTATTAGTCTAGCTCAAATC+TGG | + | chr3.2:52009120-52009139 | MS.gene05712:intron | 35.0% |
| ! | TGTCATTCATTCGACTTTTC+AGG | + | chr3.2:52008596-52008615 | MS.gene05712:CDS | 35.0% |
| ! | TTCTGATCGTTTGATTCGAT+TGG | + | chr3.2:52008754-52008773 | MS.gene05712:CDS | 35.0% |
| ! | TTTAAAACGGTGCATCAAAG+CGG | - | chr3.2:52006339-52006358 | None:intergenic | 35.0% |
| ! | TTTTCTGGATTTCACATGGA+TGG | + | chr3.2:52005349-52005368 | MS.gene05712:CDS | 35.0% |
| !! | GTTGTTTTCATAAGCTACTC+TGG | - | chr3.2:52009324-52009343 | None:intergenic | 35.0% |
| !!! | CTTTTTTGTGCTCCTTTGAT+TGG | + | chr3.2:52010132-52010151 | MS.gene05712:intron | 35.0% |
| AAGAACAAGCTTGACAGAAC+AGG | - | chr3.2:52006637-52006656 | None:intergenic | 40.0% | |
| AATGCAGGTTCTGTATACAC+GGG | + | chr3.2:52009052-52009071 | MS.gene05712:intron | 40.0% | |
| AATTGCTGCTATGCAGATAC+GGG | + | chr3.2:52008676-52008695 | MS.gene05712:intron | 40.0% | |
| ACCTTTACAGCATGCTCTTA+AGG | - | chr3.2:52009647-52009666 | None:intergenic | 40.0% | |
| AGGTTGTAGAACATGGTTTG+GGG | + | chr3.2:52008856-52008875 | MS.gene05712:intron | 40.0% | |
| ATCATGTATGATAGCTGTGC+AGG | - | chr3.2:52006299-52006318 | None:intergenic | 40.0% | |
| CAATGACACGGAAAATCTAC+CGG | - | chr3.2:52007964-52007983 | None:intergenic | 40.0% | |
| CAGGTTGTAGAACATGGTTT+GGG | + | chr3.2:52008855-52008874 | MS.gene05712:intron | 40.0% | |
| CATAACACGAAGCAATTCCT+CGG | - | chr3.2:52007272-52007291 | None:intergenic | 40.0% | |
| CATACCACATGTACACCTTT+AGG | - | chr3.2:52010189-52010208 | None:intergenic | 40.0% | |
| GAAAACACACCTATGACGAA+AGG | - | chr3.2:52005439-52005458 | None:intergenic | 40.0% | |
| GAAAAGGAAATGATTACCGG+TGG | - | chr3.2:52008916-52008935 | None:intergenic | 40.0% | |
| GAAGATTATCGTGTCATACC+GGG | + | chr3.2:52010264-52010283 | MS.gene05712:CDS | 40.0% | |
| GGAAAGTCGAAAATAGACAC+AGG | - | chr3.2:52010075-52010094 | None:intergenic | 40.0% | |
| TAATTTCAGTGGGGAGAGTA+TGG | + | chr3.2:52009615-52009634 | MS.gene05712:intron | 40.0% | |
| TACAACCAACCTTTCGTCAT+AGG | + | chr3.2:52005427-52005446 | MS.gene05712:CDS | 40.0% | |
| TCCACGAGGTATGATGATAT+CGG | - | chr3.2:52008484-52008503 | None:intergenic | 40.0% | |
| TCTCACAAGTGCTTACATGT+TGG | - | chr3.2:52009231-52009250 | None:intergenic | 40.0% | |
| TGCCAAACGATATCTCAGAA+AGG | + | chr3.2:52009821-52009840 | MS.gene05712:CDS | 40.0% | |
| TGGATGATGTCTTCAAATGC+AGG | + | chr3.2:52009037-52009056 | MS.gene05712:intron | 40.0% | |
| TTTCACATCTTAGCAAGGAG+AGG | - | chr3.2:52009535-52009554 | None:intergenic | 40.0% | |
| ! | ACATTGTGGATTATGAGGAG+CGG | - | chr3.2:52007785-52007804 | None:intergenic | 40.0% |
| ! | AGCTCAAATCTGGAGTTACA+TGG | + | chr3.2:52009130-52009149 | MS.gene05712:intron | 40.0% |
| ! | ATCAGATGCTTTTGATACCG+AGG | + | chr3.2:52007252-52007271 | MS.gene05712:intron | 40.0% |
| ! | CTTGATCAGGTTGTAGAACA+TGG | + | chr3.2:52008849-52008868 | MS.gene05712:intron | 40.0% |
| ! | GCTCAAATCTGGAGTTACAT+GGG | + | chr3.2:52009131-52009150 | MS.gene05712:intron | 40.0% |
| ! | GTGACATCTGAGATAGAGAT+TGG | + | chr3.2:52010234-52010253 | MS.gene05712:CDS | 40.0% |
| ! | GTTATGGACAAGTTGAAGCA+TGG | + | chr3.2:52007286-52007305 | MS.gene05712:CDS | 40.0% |
| ! | TCAGGTTGTAGAACATGGTT+TGG | + | chr3.2:52008854-52008873 | MS.gene05712:intron | 40.0% |
| !! | CTAGTCATTCGAGAGCATTA+GGG | + | chr3.2:52005801-52005820 | MS.gene05712:intron | 40.0% |
| !! | TGCCTTTCTGAGATATCGTT+TGG | - | chr3.2:52009826-52009845 | None:intergenic | 40.0% |
| !!! | GGATGGTTTTGAGAAAAGAG+AGG | + | chr3.2:52005366-52005385 | MS.gene05712:CDS | 40.0% |
| !!! | TCTATTTTTGCAGGTGTTGC+TGG | + | chr3.2:52006404-52006423 | MS.gene05712:intron | 40.0% |
| ACACACCTATGACGAAAGGT+TGG | - | chr3.2:52005435-52005454 | None:intergenic | 45.0% | |
| ACATCTTAGCAAGGAGAGGA+GGG | - | chr3.2:52009531-52009550 | None:intergenic | 45.0% | |
| ACTCTCCCCACTGAAATTAG+AGG | - | chr3.2:52009614-52009633 | None:intergenic | 45.0% | |
| AGAAGGTGACAATGGTCAAC+AGG | + | chr3.2:52009696-52009715 | MS.gene05712:CDS | 45.0% | |
| ATCCACAGAGAAGGTGACAA+TGG | + | chr3.2:52009688-52009707 | MS.gene05712:CDS | 45.0% | |
| ATGAACCTGTGCCAAGGATA+GGG | - | chr3.2:52009864-52009883 | None:intergenic | 45.0% | |
| ATTGACAGGCTAGCAGGATA+AGG | + | chr3.2:52007162-52007181 | MS.gene05712:intron | 45.0% | |
| ATTGCTGCTATGCAGATACG+GGG | + | chr3.2:52008677-52008696 | MS.gene05712:intron | 45.0% | |
| CATAGATTGTCCACCACCAA+AGG | - | chr3.2:52005513-52005532 | None:intergenic | 45.0% | |
| CGAGGAATTGCTTCGTGTTA+TGG | + | chr3.2:52007270-52007289 | MS.gene05712:CDS | 45.0% | |
| CTGAAAATTGACAGGCTAGC+AGG | + | chr3.2:52007156-52007175 | MS.gene05712:intron | 45.0% | |
| CTGATGTTCGTTTGGCAAGA+AGG | + | chr3.2:52008038-52008057 | MS.gene05712:CDS | 45.0% | |
| CTGGTCAATACTTGGAAGCA+AGG | - | chr3.2:52009179-52009198 | None:intergenic | 45.0% | |
| GATATCATCATACCTCGTGG+AGG | + | chr3.2:52008483-52008502 | MS.gene05712:CDS | 45.0% | |
| GATTAACAAGCACAACTCGC+TGG | - | chr3.2:52006487-52006506 | None:intergenic | 45.0% | |
| TATCGTGTCATACCGGGAAT+GGG | + | chr3.2:52010270-52010289 | MS.gene05712:CDS | 45.0% | |
| TGCAGATGCTGATGTTCGTT+TGG | + | chr3.2:52008030-52008049 | MS.gene05712:intron | 45.0% | |
| TTACTGTTGGACCCTATCCT+TGG | + | chr3.2:52009850-52009869 | MS.gene05712:CDS | 45.0% | |
| TTATCGTGTCATACCGGGAA+TGG | + | chr3.2:52010269-52010288 | MS.gene05712:CDS | 45.0% | |
| TTCGTTTGGCAAGAAGGATC+AGG | + | chr3.2:52008044-52008063 | MS.gene05712:CDS | 45.0% | |
| TTGACAGAACAGGATGCTTG+AGG | - | chr3.2:52006627-52006646 | None:intergenic | 45.0% | |
| ! | AGAAAGGCACGTGTTACTGT+TGG | + | chr3.2:52009837-52009856 | MS.gene05712:CDS | 45.0% |
| ! | AGACACAGGATTTGAGGCAT+CGG | - | chr3.2:52010061-52010080 | None:intergenic | 45.0% |
| ! | ATTGTGGATTATGAGGAGCG+GGG | - | chr3.2:52007783-52007802 | None:intergenic | 45.0% |
| ! | CATGTTGACCAAGCTTTGTG+CGG | - | chr3.2:52008548-52008567 | None:intergenic | 45.0% |
| ! | CATTGTGGATTATGAGGAGC+GGG | - | chr3.2:52007784-52007803 | None:intergenic | 45.0% |
| ! | CGGGTGTGGATTTTTGTAAG+AGG | + | chr3.2:52009071-52009090 | MS.gene05712:CDS | 45.0% |
| ! | GCCTTAAGAGCATGCTGTAA+AGG | + | chr3.2:52009643-52009662 | MS.gene05712:CDS | 45.0% |
| ! | GCGAGTTGTGCTTGTTAATC+AGG | + | chr3.2:52006487-52006506 | MS.gene05712:CDS | 45.0% |
| ! | TTTTCCACGATCCTCGTGTT+CGG | + | chr3.2:52007608-52007627 | MS.gene05712:CDS | 45.0% |
| !! | AAAGACACTTCGGCCTTGTT+TGG | - | chr3.2:52009445-52009464 | None:intergenic | 45.0% |
| !! | CATCAAAGCGGACTAAACCT+AGG | - | chr3.2:52006327-52006346 | None:intergenic | 45.0% |
| !! | CTGCTAGCCTGTCAATTTTC+AGG | - | chr3.2:52007158-52007177 | None:intergenic | 45.0% |
| !! | GCTAGTCATTCGAGAGCATT+AGG | + | chr3.2:52005800-52005819 | MS.gene05712:intron | 45.0% |
| !!! | ATTTTTGCAGGTGTTGCTGG+TGG | + | chr3.2:52006407-52006426 | MS.gene05712:intron | 45.0% |
| !! | ATTTACAAATAATTAATTAA+TGG | - | chr3.2:52005705-52005724 | None:intergenic | 5.0% |
| AAGCAAGTGATCACTCCCAC+CGG | + | chr3.2:52008897-52008916 | MS.gene05712:CDS | 50.0% | |
| ACGTGATTATCTCCTCCACG+AGG | - | chr3.2:52008498-52008517 | None:intergenic | 50.0% | |
| ACTGTCATGAACCTGTGCCA+AGG | - | chr3.2:52009870-52009889 | None:intergenic | 50.0% | |
| AGGGCGGTTACTTACCTTCT+AGG | + | chr3.2:52005833-52005852 | MS.gene05712:intron | 50.0% | |
| AGGTTCTGTATACACGGGTG+TGG | + | chr3.2:52009057-52009076 | MS.gene05712:intron | 50.0% | |
| ATCTTAGCAAGGAGAGGAGG+GGG | - | chr3.2:52009529-52009548 | None:intergenic | 50.0% | |
| CACATCTTAGCAAGGAGAGG+AGG | - | chr3.2:52009532-52009551 | None:intergenic | 50.0% | |
| CACGAGGATCGTGGAAAACA+AGG | - | chr3.2:52007606-52007625 | None:intergenic | 50.0% | |
| CATCTTAGCAAGGAGAGGAG+GGG | - | chr3.2:52009530-52009549 | None:intergenic | 50.0% | |
| CATGAACCTGTGCCAAGGAT+AGG | - | chr3.2:52009865-52009884 | None:intergenic | 50.0% | |
| GACCATTGTCACCTTCTCTG+TGG | - | chr3.2:52009693-52009712 | None:intergenic | 50.0% | |
| GACTACCTATCTGCGTCCTT+TGG | + | chr3.2:52005494-52005513 | MS.gene05712:intron | 50.0% | |
| GAGTTCGGAGATCGGTACTT+TGG | + | chr3.2:52010294-52010313 | MS.gene05712:CDS | 50.0% | |
| GCCGATATCATCATACCTCG+TGG | + | chr3.2:52008480-52008499 | MS.gene05712:CDS | 50.0% | |
| GGTGACAATGGTCAACAGGT+TGG | + | chr3.2:52009700-52009719 | MS.gene05712:intron | 50.0% | |
| GTGATACCAGCGAGAAGGAT+CGG | + | chr3.2:52008068-52008087 | MS.gene05712:CDS | 50.0% | |
| GTGGTGTCTCTGTCATCAGA+AGG | + | chr3.2:52009098-52009117 | MS.gene05712:CDS | 50.0% | |
| TACCTATCTGCGTCCTTTGG+TGG | + | chr3.2:52005497-52005516 | MS.gene05712:intron | 50.0% | |
| TCGTGGAGGAGATAATCACG+TGG | + | chr3.2:52008497-52008516 | MS.gene05712:CDS | 50.0% | |
| TGATACCAGCGAGAAGGATC+GGG | + | chr3.2:52008069-52008088 | MS.gene05712:CDS | 50.0% | |
| TTCATCAACTCCCGAACACG+AGG | - | chr3.2:52007622-52007641 | None:intergenic | 50.0% | |
| TTTCCACGATCCTCGTGTTC+GGG | + | chr3.2:52007609-52007628 | MS.gene05712:CDS | 50.0% | |
| ! | GGCTCCTAAAGGTGTACATG+TGG | + | chr3.2:52010182-52010201 | MS.gene05712:intron | 50.0% |
| !! | TCGAGAGCATTAGGGCCTTA+GGG | + | chr3.2:52005809-52005828 | MS.gene05712:intron | 50.0% |
| !! | TTCGAGAGCATTAGGGCCTT+AGG | + | chr3.2:52005808-52005827 | MS.gene05712:intron | 50.0% |
| AATGTCCCGATCCTTCTCGC+TGG | - | chr3.2:52008077-52008096 | None:intergenic | 55.0% | |
| AGCATTAGGGCCTTAGGGCA+GGG | + | chr3.2:52005814-52005833 | MS.gene05712:intron | 55.0% | |
| AGCGAGAAGGATCGGGACAT+TGG | + | chr3.2:52008076-52008095 | MS.gene05712:CDS | 55.0% | |
| ATACCGGGAATGGGCGAGTT+CGG | + | chr3.2:52010279-52010298 | MS.gene05712:CDS | 55.0% | |
| CACCACCAAAGGACGCAGAT+AGG | - | chr3.2:52005502-52005521 | None:intergenic | 55.0% | |
| CAGCACATCCGCACAAAGCT+TGG | + | chr3.2:52008537-52008556 | MS.gene05712:CDS | 55.0% | |
| CTATCTGCGTCCTTTGGTGG+TGG | + | chr3.2:52005500-52005519 | MS.gene05712:intron | 55.0% | |
| GAATGGGCGAGTTCGGAGAT+CGG | + | chr3.2:52010286-52010305 | MS.gene05712:CDS | 55.0% | |
| TAAGTAACCGCCCTGCCCTA+AGG | - | chr3.2:52005827-52005846 | None:intergenic | 55.0% | |
| TTGGACCCTATCCTTGGCAC+AGG | + | chr3.2:52009856-52009875 | MS.gene05712:CDS | 55.0% | |
| ACTCCCGAACACGAGGATCG+TGG | - | chr3.2:52007615-52007634 | None:intergenic | 60.0% | |
| ATTAGGGCCTTAGGGCAGGG+CGG | + | chr3.2:52005817-52005836 | MS.gene05712:intron | 60.0% | |
| CAGGCGTGATACCAGCGAGA+AGG | + | chr3.2:52008063-52008082 | MS.gene05712:CDS | 60.0% | |
| GAGCATTAGGGCCTTAGGGC+AGG | + | chr3.2:52005813-52005832 | MS.gene05712:intron | 60.0% | |
| TCTCCGAACTCGCCCATTCC+CGG | - | chr3.2:52010285-52010304 | None:intergenic | 60.0% | |
| ! | GTTGCTGGTGGTGCAGCATC+CGG | + | chr3.2:52006419-52006438 | MS.gene05712:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 52005295 | 52010356 | 52005295 | ID=MS.gene05712 |
| chr3.2 | mRNA | 52005295 | 52010356 | 52005295 | ID=MS.gene05712.t1;Parent=MS.gene05712 |
| chr3.2 | exon | 52005295 | 52005448 | 52005295 | ID=MS.gene05712.t1.exon1;Parent=MS.gene05712.t1 |
| chr3.2 | CDS | 52005295 | 52005448 | 52005295 | ID=cds.MS.gene05712.t1;Parent=MS.gene05712.t1 |
| chr3.2 | exon | 52006417 | 52006508 | 52006417 | ID=MS.gene05712.t1.exon2;Parent=MS.gene05712.t1 |
| chr3.2 | CDS | 52006417 | 52006508 | 52006417 | ID=cds.MS.gene05712.t1;Parent=MS.gene05712.t1 |
| chr3.2 | exon | 52006822 | 52006891 | 52006822 | ID=MS.gene05712.t1.exon3;Parent=MS.gene05712.t1 |
| chr3.2 | CDS | 52006822 | 52006891 | 52006822 | ID=cds.MS.gene05712.t1;Parent=MS.gene05712.t1 |
| chr3.2 | exon | 52007257 | 52007369 | 52007257 | ID=MS.gene05712.t1.exon4;Parent=MS.gene05712.t1 |
| chr3.2 | CDS | 52007257 | 52007369 | 52007257 | ID=cds.MS.gene05712.t1;Parent=MS.gene05712.t1 |
| chr3.2 | exon | 52007568 | 52007664 | 52007568 | ID=MS.gene05712.t1.exon5;Parent=MS.gene05712.t1 |
| chr3.2 | CDS | 52007568 | 52007664 | 52007568 | ID=cds.MS.gene05712.t1;Parent=MS.gene05712.t1 |
| chr3.2 | exon | 52008035 | 52008114 | 52008035 | ID=MS.gene05712.t1.exon6;Parent=MS.gene05712.t1 |
| chr3.2 | CDS | 52008035 | 52008114 | 52008035 | ID=cds.MS.gene05712.t1;Parent=MS.gene05712.t1 |
| chr3.2 | exon | 52008423 | 52008617 | 52008423 | ID=MS.gene05712.t1.exon7;Parent=MS.gene05712.t1 |
| chr3.2 | CDS | 52008423 | 52008617 | 52008423 | ID=cds.MS.gene05712.t1;Parent=MS.gene05712.t1 |
| chr3.2 | exon | 52008692 | 52008775 | 52008692 | ID=MS.gene05712.t1.exon8;Parent=MS.gene05712.t1 |
| chr3.2 | CDS | 52008692 | 52008775 | 52008692 | ID=cds.MS.gene05712.t1;Parent=MS.gene05712.t1 |
| chr3.2 | exon | 52008858 | 52008918 | 52008858 | ID=MS.gene05712.t1.exon9;Parent=MS.gene05712.t1 |
| chr3.2 | CDS | 52008858 | 52008918 | 52008858 | ID=cds.MS.gene05712.t1;Parent=MS.gene05712.t1 |
| chr3.2 | exon | 52009059 | 52009119 | 52009059 | ID=MS.gene05712.t1.exon10;Parent=MS.gene05712.t1 |
| chr3.2 | CDS | 52009059 | 52009119 | 52009059 | ID=cds.MS.gene05712.t1;Parent=MS.gene05712.t1 |
| chr3.2 | exon | 52009624 | 52009717 | 52009624 | ID=MS.gene05712.t1.exon11;Parent=MS.gene05712.t1 |
| chr3.2 | CDS | 52009624 | 52009717 | 52009624 | ID=cds.MS.gene05712.t1;Parent=MS.gene05712.t1 |
| chr3.2 | exon | 52009805 | 52009877 | 52009805 | ID=MS.gene05712.t1.exon12;Parent=MS.gene05712.t1 |
| chr3.2 | CDS | 52009805 | 52009877 | 52009805 | ID=cds.MS.gene05712.t1;Parent=MS.gene05712.t1 |
| chr3.2 | exon | 52009967 | 52010049 | 52009967 | ID=MS.gene05712.t1.exon13;Parent=MS.gene05712.t1 |
| chr3.2 | CDS | 52009967 | 52010049 | 52009967 | ID=cds.MS.gene05712.t1;Parent=MS.gene05712.t1 |
| chr3.2 | exon | 52010183 | 52010356 | 52010183 | ID=MS.gene05712.t1.exon14;Parent=MS.gene05712.t1 |
| chr3.2 | CDS | 52010183 | 52010356 | 52010183 | ID=cds.MS.gene05712.t1;Parent=MS.gene05712.t1 |
| Gene Sequence |
| Protein sequence |
