Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43992.t1 | XP_013468972.1 | 100 | 126 | 0 | 0 | 1 | 126 | 1 | 126 | 3.00E-59 | 237.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43992.t1 | Q9M4B5 | 71.3 | 129 | 34 | 1 | 1 | 126 | 1 | 129 | 1.3e-42 | 173.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43992.t1 | I3SEP8 | 100.0 | 126 | 0 | 0 | 1 | 126 | 1 | 126 | 2.2e-59 | 237.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene43992 | 0.800048 | 1.73E-48 | -1.69E-46 |
| MS.gene049255 | MS.gene43992 | 0.855679 | 5.37E-62 | -1.69E-46 |
| MS.gene049340 | MS.gene43992 | 0.80586 | 1.09E-49 | -1.69E-46 |
| MS.gene049341 | MS.gene43992 | 0.847927 | 8.48E-60 | -1.69E-46 |
| MS.gene049501 | MS.gene43992 | 0.806207 | 9.20E-50 | -1.69E-46 |
| MS.gene049756 | MS.gene43992 | 0.822354 | 2.48E-53 | -1.69E-46 |
| MS.gene049821 | MS.gene43992 | 0.83022 | 3.32E-55 | -1.69E-46 |
| MS.gene049825 | MS.gene43992 | 0.819037 | 1.43E-52 | -1.69E-46 |
| MS.gene049873 | MS.gene43992 | 0.818863 | 1.57E-52 | -1.69E-46 |
| MS.gene050277 | MS.gene43992 | 0.873591 | 1.31E-67 | -1.69E-46 |
| MS.gene050303 | MS.gene43992 | 0.880385 | 5.74E-70 | -1.69E-46 |
| MS.gene050719 | MS.gene43992 | 0.811547 | 6.63E-51 | -1.69E-46 |
| MS.gene050721 | MS.gene43992 | 0.81553 | 8.82E-52 | -1.69E-46 |
| MS.gene050724 | MS.gene43992 | 0.805659 | 1.20E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene43992 | 0.816254 | 6.08E-52 | -1.69E-46 |
| MS.gene050815 | MS.gene43992 | 0.854712 | 1.03E-61 | -1.69E-46 |
| MS.gene050838 | MS.gene43992 | 0.809908 | 1.50E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene43992 | 0.803259 | 3.80E-49 | -1.69E-46 |
| MS.gene051088 | MS.gene43992 | 0.822373 | 2.45E-53 | -1.69E-46 |
| MS.gene051241 | MS.gene43992 | 0.819302 | 1.25E-52 | -1.69E-46 |
| MS.gene051243 | MS.gene43992 | 0.819459 | 1.15E-52 | -1.69E-46 |
| MS.gene051247 | MS.gene43992 | 0.834192 | 3.45E-56 | -1.69E-46 |
| MS.gene051328 | MS.gene43992 | 0.878867 | 1.98E-69 | -1.69E-46 |
| MS.gene051330 | MS.gene43992 | 0.849885 | 2.43E-60 | -1.69E-46 |
| MS.gene05134 | MS.gene43992 | 0.856438 | 3.22E-62 | -1.69E-46 |
| MS.gene051451 | MS.gene43992 | 0.819628 | 1.05E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene43992 | 0.820275 | 7.48E-53 | -1.69E-46 |
| MS.gene051700 | MS.gene43992 | 0.834591 | 2.74E-56 | -1.69E-46 |
| MS.gene051746 | MS.gene43992 | 0.817995 | 2.47E-52 | -1.69E-46 |
| MS.gene051757 | MS.gene43992 | 0.802774 | 4.78E-49 | -1.69E-46 |
| MS.gene051791 | MS.gene43992 | 0.828333 | 9.53E-55 | -1.69E-46 |
| MS.gene05188 | MS.gene43992 | 0.859784 | 3.25E-63 | -1.69E-46 |
| MS.gene051903 | MS.gene43992 | 0.826218 | 3.06E-54 | -1.69E-46 |
| MS.gene051975 | MS.gene43992 | 0.83213 | 1.13E-55 | -1.69E-46 |
| MS.gene052012 | MS.gene43992 | 0.81326 | 2.80E-51 | -1.69E-46 |
| MS.gene052133 | MS.gene43992 | 0.826943 | 2.06E-54 | -1.69E-46 |
| MS.gene052286 | MS.gene43992 | 0.819538 | 1.10E-52 | -1.69E-46 |
| MS.gene052302 | MS.gene43992 | 0.80267 | 5.02E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene43992 | 0.820002 | 8.63E-53 | -1.69E-46 |
| MS.gene052519 | MS.gene43992 | 0.81778 | 2.76E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene43992 | 0.809894 | 1.51E-50 | -1.69E-46 |
| MS.gene052879 | MS.gene43992 | 0.817508 | 3.18E-52 | -1.69E-46 |
| MS.gene052880 | MS.gene43992 | 0.807018 | 6.20E-50 | -1.69E-46 |
| MS.gene052896 | MS.gene43992 | 0.801312 | 9.55E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene43992 | 0.884084 | 2.59E-71 | -1.69E-46 |
| MS.gene053008 | MS.gene43992 | 0.805859 | 1.09E-49 | -1.69E-46 |
| MS.gene053109 | MS.gene43992 | 0.802464 | 5.54E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene43992 | 0.841113 | 5.79E-58 | -1.69E-46 |
| MS.gene053581 | MS.gene43992 | 0.802345 | 5.86E-49 | -1.69E-46 |
| MS.gene053630 | MS.gene43992 | 0.80019 | 1.62E-48 | -1.69E-46 |
| MS.gene054472 | MS.gene43992 | 0.805273 | 1.45E-49 | -1.69E-46 |
| MS.gene05476 | MS.gene43992 | 0.80363 | 3.18E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene43992 | 0.828036 | 1.12E-54 | -1.69E-46 |
| MS.gene05517 | MS.gene43992 | 0.834587 | 2.75E-56 | -1.69E-46 |
| MS.gene055466 | MS.gene43992 | 0.835766 | 1.39E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene43992 | 0.8344 | 3.06E-56 | -1.69E-46 |
| MS.gene055512 | MS.gene43992 | 0.82425 | 8.94E-54 | -1.69E-46 |
| MS.gene055555 | MS.gene43992 | 0.807127 | 5.88E-50 | -1.69E-46 |
| MS.gene055580 | MS.gene43992 | -0.826919 | 2.08E-54 | -1.69E-46 |
| MS.gene055608 | MS.gene43992 | 0.824507 | 7.77E-54 | -1.69E-46 |
| MS.gene055623 | MS.gene43992 | 0.80261 | 5.17E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene43992 | 0.817184 | 3.76E-52 | -1.69E-46 |
| MS.gene055808 | MS.gene43992 | 0.862456 | 5.00E-64 | -1.69E-46 |
| MS.gene056043 | MS.gene43992 | -0.826978 | 2.02E-54 | -1.69E-46 |
| MS.gene056091 | MS.gene43992 | 0.845555 | 3.78E-59 | -1.69E-46 |
| MS.gene056215 | MS.gene43992 | 0.86018 | 2.47E-63 | -1.69E-46 |
| MS.gene056432 | MS.gene43992 | 0.810863 | 9.33E-51 | -1.69E-46 |
| MS.gene056580 | MS.gene43992 | 0.838468 | 2.83E-57 | -1.69E-46 |
| MS.gene056601 | MS.gene43992 | 0.809744 | 1.63E-50 | -1.69E-46 |
| MS.gene056631 | MS.gene43992 | 0.888966 | 3.69E-73 | -1.69E-46 |
| MS.gene056642 | MS.gene43992 | 0.815151 | 1.07E-51 | -1.69E-46 |
| MS.gene056760 | MS.gene43992 | 0.834284 | 3.28E-56 | -1.69E-46 |
| MS.gene056986 | MS.gene43992 | 0.818242 | 2.17E-52 | -1.69E-46 |
| MS.gene057057 | MS.gene43992 | 0.811105 | 8.27E-51 | -1.69E-46 |
| MS.gene057060 | MS.gene43992 | 0.81555 | 8.73E-52 | -1.69E-46 |
| MS.gene057094 | MS.gene43992 | 0.819528 | 1.11E-52 | -1.69E-46 |
| MS.gene05712 | MS.gene43992 | 0.804832 | 1.79E-49 | -1.69E-46 |
| MS.gene057140 | MS.gene43992 | 0.847283 | 1.28E-59 | -1.69E-46 |
| MS.gene057234 | MS.gene43992 | 0.833867 | 4.17E-56 | -1.69E-46 |
| MS.gene057260 | MS.gene43992 | 0.803074 | 4.15E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene43992 | 0.834854 | 2.36E-56 | -1.69E-46 |
| MS.gene057694 | MS.gene43992 | 0.816204 | 6.24E-52 | -1.69E-46 |
| MS.gene057705 | MS.gene43992 | 0.856979 | 2.23E-62 | -1.69E-46 |
| MS.gene05795 | MS.gene43992 | 0.802038 | 6.78E-49 | -1.69E-46 |
| MS.gene058037 | MS.gene43992 | 0.803227 | 3.86E-49 | -1.69E-46 |
| MS.gene058055 | MS.gene43992 | 0.816821 | 4.54E-52 | -1.69E-46 |
| MS.gene058084 | MS.gene43992 | 0.857607 | 1.45E-62 | -1.69E-46 |
| MS.gene058238 | MS.gene43992 | 0.816208 | 6.23E-52 | -1.69E-46 |
| MS.gene058906 | MS.gene43992 | 0.884254 | 2.24E-71 | -1.69E-46 |
| MS.gene059151 | MS.gene43992 | 0.827796 | 1.28E-54 | -1.69E-46 |
| MS.gene059249 | MS.gene43992 | 0.826792 | 2.23E-54 | -1.69E-46 |
| MS.gene059317 | MS.gene43992 | 0.804567 | 2.03E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene43992 | 0.851232 | 1.01E-60 | -1.69E-46 |
| MS.gene059569 | MS.gene43992 | 0.802603 | 5.19E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene43992 | 0.800163 | 1.64E-48 | -1.69E-46 |
| MS.gene059830 | MS.gene43992 | 0.822068 | 2.89E-53 | -1.69E-46 |
| MS.gene059842 | MS.gene43992 | 0.838134 | 3.44E-57 | -1.69E-46 |
| MS.gene059898 | MS.gene43992 | 0.825334 | 4.96E-54 | -1.69E-46 |
| MS.gene059937 | MS.gene43992 | 0.804489 | 2.11E-49 | -1.69E-46 |
| MS.gene06001 | MS.gene43992 | 0.894258 | 2.92E-75 | -1.69E-46 |
| MS.gene06011 | MS.gene43992 | 0.8199 | 9.11E-53 | -1.69E-46 |
| MS.gene060365 | MS.gene43992 | 0.817162 | 3.80E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene43992 | 0.922553 | 8.46E-89 | -1.69E-46 |
| MS.gene060572 | MS.gene43992 | 0.802687 | 4.98E-49 | -1.69E-46 |
| MS.gene060586 | MS.gene43992 | 0.847119 | 1.41E-59 | -1.69E-46 |
| MS.gene060587 | MS.gene43992 | 0.822907 | 1.84E-53 | -1.69E-46 |
| MS.gene060803 | MS.gene43992 | 0.82263 | 2.14E-53 | -1.69E-46 |
| MS.gene060907 | MS.gene43992 | 0.817538 | 3.13E-52 | -1.69E-46 |
| MS.gene060917 | MS.gene43992 | 0.862738 | 4.10E-64 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43992.t1 | MTR_1g080770 | 100.000 | 126 | 0 | 0 | 1 | 126 | 1 | 126 | 6.93e-88 | 251 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43992.t1 | AT1G08780 | 71.318 | 129 | 34 | 1 | 1 | 126 | 1 | 129 | 1.64e-62 | 187 |
Find 33 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATTCTGTATGGGAAGTT+TGG | 0.251421 | 1.3:-57133067 | MS.gene43992:CDS |
| ACAGGAATCAAATGATAATT+TGG | 0.284647 | 1.3:-57133281 | MS.gene43992:intron |
| AGAAGCGACAAGCCAGAAAT+TGG | 0.310931 | 1.3:-57133143 | MS.gene43992:CDS |
| AGGTCGTTCGGTTTCAAATA+GGG | 0.342219 | 1.3:-57133222 | MS.gene43992:CDS |
| GAGGTCGTTCGGTTTCAAAT+AGG | 0.358066 | 1.3:-57133223 | MS.gene43992:CDS |
| CTCCCAGGTAACTTCCGTTT+CGG | 0.367751 | 1.3:+57137022 | None:intergenic |
| CGAATTTGTTGATGTTCTGC+TGG | 0.380247 | 1.3:+57136997 | None:intergenic |
| GATCCGAAACGGAAGTTACC+TGG | 0.424382 | 1.3:-57137025 | MS.gene43992:CDS |
| CAGCAGAACATCAACAAATT+CGG | 0.438286 | 1.3:-57136996 | MS.gene43992:CDS |
| GAACTGAAGAAAATTCTGTA+TGG | 0.443165 | 1.3:-57133076 | MS.gene43992:CDS |
| CTGCTCTCTACTTCATCCTT+AGG | 0.477281 | 1.3:+57133181 | None:intergenic |
| TCACAGATGAAGAGGTCGTT+CGG | 0.479003 | 1.3:-57133234 | MS.gene43992:CDS |
| TTGAATCAACAAGATGCAAC+AGG | 0.487875 | 1.3:-57137135 | None:intergenic |
| GATGTTCTGCTGGTCCTCCC+AGG | 0.504132 | 1.3:+57137007 | None:intergenic |
| GGTATTTGCTCATGTGCCTA+AGG | 0.537164 | 1.3:-57133197 | MS.gene43992:CDS |
| AACTGAAGAAAATTCTGTAT+GGG | 0.540625 | 1.3:-57133075 | MS.gene43992:CDS |
| TTGTGATGCGTAAAGGGAGG+AGG | 0.548135 | 1.3:-57137047 | MS.gene43992:intron |
| GGTCGTTCGGTTTCAAATAG+GGG | 0.554503 | 1.3:-57133221 | MS.gene43992:CDS |
| GGAATCAAATGATAATTTGG+AGG | 0.556672 | 1.3:-57133278 | MS.gene43992:CDS |
| TGGAGAATCTATCAATCTTG+AGG | 0.571653 | 1.3:-57133047 | MS.gene43992:CDS |
| CTAAGGATGAAGTAGAGAGC+AGG | 0.573213 | 1.3:-57133180 | MS.gene43992:CDS |
| GTTAATTCTCACAGATGAAG+AGG | 0.578655 | 1.3:-57133242 | MS.gene43992:CDS |
| TGATGAGATCAAAATCGCTA+AGG | 0.599557 | 1.3:-57136943 | MS.gene43992:intron |
| CCAGAAATTGGAAAAGCTTG+AGG | 0.599943 | 1.3:-57133131 | MS.gene43992:CDS |
| ATCCGAAACGGAAGTTACCT+GGG | 0.600013 | 1.3:-57137024 | MS.gene43992:CDS |
| CGTTCGGTTTCAAATAGGGG+AGG | 0.636159 | 1.3:-57133218 | MS.gene43992:CDS |
| AGAATCTATCAATCTTGAGG+AGG | 0.639907 | 1.3:-57133044 | MS.gene43992:CDS |
| AAAGGGAGGAGGATCCGAAA+CGG | 0.642912 | 1.3:-57137036 | MS.gene43992:intron |
| AGAACATCAACAAATTCGGA+AGG | 0.648692 | 1.3:-57136992 | MS.gene43992:CDS |
| TTCAGACATCTGAGCAACCA+CGG | 0.661375 | 1.3:+57133096 | None:intergenic |
| GAAATTGGAAAAGCTTGAGG+AGG | 0.664223 | 1.3:-57133128 | MS.gene43992:CDS |
| TGAGGAGGAGAAACAATCCG+TGG | 0.717310 | 1.3:-57133113 | MS.gene43992:CDS |
| CGAAACGGAAGTTACCTGGG+AGG | 0.771650 | 1.3:-57137021 | MS.gene43992:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAAATTAAAAAATAT+AGG | - | chr1.3:57135121-57135140 | MS.gene43992:intron | 0.0% |
| !! | ATTATGTAAAAAAATTGTTA+CGG | + | chr1.3:57136030-57136049 | None:intergenic | 10.0% |
| !! | TTATTAAAATATGGTATAAA+CGG | - | chr1.3:57135241-57135260 | MS.gene43992:intron | 10.0% |
| !!! | TTAATAACTTTTTTCAATTA+AGG | + | chr1.3:57133602-57133621 | None:intergenic | 10.0% |
| !! | AAAAAAAATATATCAGCAAT+AGG | - | chr1.3:57134808-57134827 | MS.gene43992:intron | 15.0% |
| !! | AAAAAAATATATCAGCAATA+GGG | - | chr1.3:57134809-57134828 | MS.gene43992:intron | 15.0% |
| !! | AAAAACAAAAATACAAAATC+TGG | - | chr1.3:57133944-57133963 | MS.gene43992:intron | 15.0% |
| !! | AAATAATATTTAGTTGTTTG+AGG | - | chr1.3:57136740-57136759 | MS.gene43992:intron | 15.0% |
| !! | AACATCAAAATATAAAACAA+TGG | + | chr1.3:57136837-57136856 | None:intergenic | 15.0% |
| !! | AATCTCAAAAATTCAATTTA+GGG | + | chr1.3:57133062-57133081 | None:intergenic | 15.0% |
| !! | AATTATGGCTTATTAAAATA+TGG | - | chr1.3:57135232-57135251 | MS.gene43992:intron | 15.0% |
| !! | ATATATATAATTCTTGTGAA+TGG | + | chr1.3:57134670-57134689 | None:intergenic | 15.0% |
| !! | TTAATGAAAATTGAAATTTC+TGG | + | chr1.3:57136071-57136090 | None:intergenic | 15.0% |
| !!! | ATACATGTCTTTTTTTTTTA+AGG | + | chr1.3:57135097-57135116 | None:intergenic | 15.0% |
| !!! | ATTTTAAAGGAAAACAAAAA+TGG | - | chr1.3:57133808-57133827 | MS.gene43992:intron | 15.0% |
| !!! | GTAAATTATTTTGAGAAATA+TGG | - | chr1.3:57134925-57134944 | MS.gene43992:intron | 15.0% |
| !!! | TATTATTTAGAGTAATTCTA+AGG | + | chr1.3:57136728-57136747 | None:intergenic | 15.0% |
| !!! | TTTTAATTTAATTGTGTAAC+AGG | - | chr1.3:57135890-57135909 | MS.gene43992:intron | 15.0% |
| !!! | TTTTCAATTTATTTCCATAA+AGG | - | chr1.3:57134327-57134346 | MS.gene43992:intron | 15.0% |
| !! | AACAACTATAAAAATTTACC+TGG | - | chr1.3:57134871-57134890 | MS.gene43992:intron | 20.0% |
| !! | ATTAAATTAAAAGAATGACG+TGG | + | chr1.3:57135882-57135901 | None:intergenic | 20.0% |
| !! | CAATCTCAAAAATTCAATTT+AGG | + | chr1.3:57133063-57133082 | None:intergenic | 20.0% |
| !! | CTCAAATAATGATAATTATC+TGG | + | chr1.3:57134231-57134250 | None:intergenic | 20.0% |
| !! | TAAATAATAGAGTAATGCTA+AGG | - | chr1.3:57135810-57135829 | MS.gene43992:intron | 20.0% |
| !! | TACAACCAAATTTATTAGAA+AGG | + | chr1.3:57134789-57134808 | None:intergenic | 20.0% |
| !! | TATGGAAATAAATTGAAAAC+AGG | + | chr1.3:57134326-57134345 | None:intergenic | 20.0% |
| !!! | CTCAACATACATTTTTATTT+TGG | - | chr1.3:57133978-57133997 | MS.gene43992:intron | 20.0% |
| !!! | GAGTGTTTCATTTATTTTAA+AGG | - | chr1.3:57133795-57133814 | MS.gene43992:intron | 20.0% |
| !!! | TATATTTTGATGTTAATGCA+TGG | - | chr1.3:57136843-57136862 | MS.gene43992:intron | 20.0% |
| !!! | TTAATCAAATTCAAAGGTTT+TGG | - | chr1.3:57133276-57133295 | MS.gene43992:CDS | 20.0% |
| !!! | TTGTTTTTGAAGAAATTTGA+GGG | - | chr1.3:57136504-57136523 | MS.gene43992:intron | 20.0% |
| !!! | TTTGTTTTTGAAGAAATTTG+AGG | - | chr1.3:57136503-57136522 | MS.gene43992:intron | 20.0% |
| !!! | TTTGTTTTTTCCATTCAAAT+AGG | + | chr1.3:57133933-57133952 | None:intergenic | 20.0% |
| ! | AAAATCTTGAATGAGATTGA+TGG | - | chr1.3:57136531-57136550 | MS.gene43992:intron | 25.0% |
| ! | AAACTATAAGAACGATATAG+CGG | + | chr1.3:57134200-57134219 | None:intergenic | 25.0% |
| ! | AACTGAAGAAAATTCTGTAT+GGG | - | chr1.3:57137086-57137105 | MS.gene43992:intron | 25.0% |
| ! | AACTGAGAAAATTGATTGAA+AGG | - | chr1.3:57136411-57136430 | MS.gene43992:intron | 25.0% |
| ! | AATTTATAAGCTCAGATATG+TGG | + | chr1.3:57133400-57133419 | None:intergenic | 25.0% |
| ! | ACAATACAAATACAAATACC+AGG | + | chr1.3:57134892-57134911 | None:intergenic | 25.0% |
| ! | ACAGGAATCAAATGATAATT+TGG | - | chr1.3:57136880-57136899 | MS.gene43992:intron | 25.0% |
| ! | AGGATATAAACTACTCATAT+AGG | + | chr1.3:57133333-57133352 | None:intergenic | 25.0% |
| ! | CGTGTGTTAATTAAAGAATA+AGG | - | chr1.3:57135039-57135058 | MS.gene43992:intron | 25.0% |
| ! | CTATAAGCTATTTATCCAAA+CGG | + | chr1.3:57134355-57134374 | None:intergenic | 25.0% |
| ! | GGATATAAACTACTCATATA+GGG | + | chr1.3:57133332-57133351 | None:intergenic | 25.0% |
| ! | GTAGTGTTTGATAAAATTAG+CGG | + | chr1.3:57133639-57133658 | None:intergenic | 25.0% |
| ! | TAAAAAAATTGTTACGGTTG+TGG | + | chr1.3:57136024-57136043 | None:intergenic | 25.0% |
| ! | TAAAGGAAAACAAAAATGGT+TGG | - | chr1.3:57133812-57133831 | MS.gene43992:intron | 25.0% |
| ! | TAAAGTTGTTTATCCAAACA+AGG | - | chr1.3:57135493-57135512 | MS.gene43992:intron | 25.0% |
| ! | TATAAGCTATTTATCCAAAC+GGG | + | chr1.3:57134354-57134373 | None:intergenic | 25.0% |
| ! | TCTCACCTTTCTAATAAATT+TGG | - | chr1.3:57134781-57134800 | MS.gene43992:intron | 25.0% |
| ! | TGATTCATATTGTATGATTC+TGG | + | chr1.3:57133900-57133919 | None:intergenic | 25.0% |
| ! | TTTGCGTTAATCAAATTCAA+AGG | - | chr1.3:57133270-57133289 | MS.gene43992:CDS | 25.0% |
| !! | AAGAATAAGGTATTCTAGTT+AGG | - | chr1.3:57135052-57135071 | MS.gene43992:intron | 25.0% |
| !! | ATGGATTAATAATTAGAAGG+AGG | - | chr1.3:57136572-57136591 | MS.gene43992:intron | 25.0% |
| !! | ATTCCTCAAATTGACATTTT+TGG | + | chr1.3:57136472-57136491 | None:intergenic | 25.0% |
| !! | CTTACATAATTTGAAGTGTT+TGG | - | chr1.3:57134472-57134491 | MS.gene43992:intron | 25.0% |
| !! | TATCGTTCTTATAGTTTTTG+AGG | - | chr1.3:57134203-57134222 | MS.gene43992:intron | 25.0% |
| !!! | AAAGGTTTTGGAATAGAAAT+GGG | - | chr1.3:57133288-57133307 | MS.gene43992:intron | 25.0% |
| !!! | ATAGGGATTCTAATTGATTT+TGG | + | chr1.3:57133315-57133334 | None:intergenic | 25.0% |
| !!! | ATATAGGCTTTGAAGAAAAA+AGG | - | chr1.3:57135137-57135156 | MS.gene43992:intron | 25.0% |
| !!! | GTAAGCACTTGTTATATAAA+AGG | + | chr1.3:57135458-57135477 | None:intergenic | 25.0% |
| !!! | TGGATGGATTAATAATTAGA+AGG | - | chr1.3:57136569-57136588 | MS.gene43992:intron | 25.0% |
| !!! | TTTGTTTTCATAAGCTATCA+TGG | + | chr1.3:57135387-57135406 | None:intergenic | 25.0% |
| !!! | TTTTTCAATTAAGGCTACAA+TGG | + | chr1.3:57133593-57133612 | None:intergenic | 25.0% |
| AAAATTCTGTATGGGAAGTT+TGG | - | chr1.3:57137094-57137113 | MS.gene43992:intron | 30.0% | |
| AGAAAGTAGCTTATAGCTTA+AGG | + | chr1.3:57133447-57133466 | None:intergenic | 30.0% | |
| AGACCAAAAATGTCAATTTG+AGG | - | chr1.3:57136466-57136485 | MS.gene43992:intron | 30.0% | |
| ATAAGCTATTTATCCAAACG+GGG | + | chr1.3:57134353-57134372 | None:intergenic | 30.0% | |
| ATCCTCGAAAATCAATTATG+TGG | - | chr1.3:57135670-57135689 | MS.gene43992:intron | 30.0% | |
| ATGTGGTAAGCTCAAAATTA+TGG | - | chr1.3:57135217-57135236 | MS.gene43992:intron | 30.0% | |
| ATTTGTTTGTGATGCGTAAA+GGG | - | chr1.3:57133108-57133127 | MS.gene43992:CDS | 30.0% | |
| CATACAATATGAATCAGAGA+AGG | - | chr1.3:57133904-57133923 | MS.gene43992:intron | 30.0% | |
| CATTATTTGAGCTTAACTAC+TGG | - | chr1.3:57134240-57134259 | MS.gene43992:intron | 30.0% | |
| CTCGATAAGCTATTTATGTT+TGG | - | chr1.3:57134430-57134449 | MS.gene43992:intron | 30.0% | |
| GAACTGAAGAAAATTCTGTA+TGG | - | chr1.3:57137085-57137104 | MS.gene43992:intron | 30.0% | |
| GGAATCAAATGATAATTTGG+AGG | - | chr1.3:57136883-57136902 | MS.gene43992:intron | 30.0% | |
| TCAAAATAAGCCAATCCAAA+CGG | - | chr1.3:57135350-57135369 | MS.gene43992:intron | 30.0% | |
| TCGGAAGAAAAAGAAATTAG+CGG | - | chr1.3:57134165-57134184 | MS.gene43992:intron | 30.0% | |
| TGATGTATACATGTATGTGT+GGG | + | chr1.3:57133756-57133775 | None:intergenic | 30.0% | |
| !! | AACCACATAATTGATTTTCG+AGG | + | chr1.3:57135675-57135694 | None:intergenic | 30.0% |
| !! | TTATTAGAGAAAGCGTTCAT+CGG | - | chr1.3:57134146-57134165 | MS.gene43992:intron | 30.0% |
| !! | TTTATTTTCTGCTTGAGTCA+AGG | + | chr1.3:57135526-57135545 | None:intergenic | 30.0% |
| !! | TTTTTACAGCTTTTTAGTCG+TGG | + | chr1.3:57134565-57134584 | None:intergenic | 30.0% |
| !!! | CAAAGGTTTTGGAATAGAAA+TGG | - | chr1.3:57133287-57133306 | MS.gene43992:intron | 30.0% |
| AAAATAAGCCAATCCAAACG+GGG | - | chr1.3:57135352-57135371 | MS.gene43992:intron | 35.0% | |
| AAATAGCGAATCGCTGATAA+CGG | + | chr1.3:57133687-57133706 | None:intergenic | 35.0% | |
| AAGTAGCTTATAGCTTAAGG+TGG | + | chr1.3:57133444-57133463 | None:intergenic | 35.0% | |
| AATGAGATTGATGGAGTTTC+TGG | - | chr1.3:57136540-57136559 | MS.gene43992:intron | 35.0% | |
| ACTCTGTCTTTGTTCATATG+AGG | + | chr1.3:57133779-57133798 | None:intergenic | 35.0% | |
| AGAACATCAACAAATTCGGA+AGG | - | chr1.3:57133169-57133188 | MS.gene43992:CDS | 35.0% | |
| AGAATCTATCAATCTTGAGG+AGG | - | chr1.3:57137117-57137136 | MS.gene43992:intron | 35.0% | |
| AGGGGGTCATATATATATAC+TGG | - | chr1.3:57135175-57135194 | MS.gene43992:intron | 35.0% | |
| ATAAGCTATCATGGAGAGTT+TGG | + | chr1.3:57135378-57135397 | None:intergenic | 35.0% | |
| ATCAATCTTGAGGAGGATTA+GGG | - | chr1.3:57137124-57137143 | MS.gene43992:intron | 35.0% | |
| ATTGAAAAAAGTAGGCAACG+TGG | - | chr1.3:57136656-57136675 | MS.gene43992:intron | 35.0% | |
| ATTGCAAAATGCTTAGAAGG+AGG | + | chr1.3:57136807-57136826 | None:intergenic | 35.0% | |
| CAAAATAAGCCAATCCAAAC+GGG | - | chr1.3:57135351-57135370 | MS.gene43992:intron | 35.0% | |
| CAGCAGAACATCAACAAATT+CGG | - | chr1.3:57133165-57133184 | MS.gene43992:CDS | 35.0% | |
| CATTTGTTTGTGATGCGTAA+AGG | - | chr1.3:57133107-57133126 | MS.gene43992:CDS | 35.0% | |
| CTTTCTTACATCAACCATGT+TGG | + | chr1.3:57136446-57136465 | None:intergenic | 35.0% | |
| GAGAAGGTTTCCTATTTGAA+TGG | - | chr1.3:57133920-57133939 | MS.gene43992:intron | 35.0% | |
| GGTGAGTGATTGAAAAAAGT+AGG | - | chr1.3:57136648-57136667 | MS.gene43992:intron | 35.0% | |
| GTCATTGCAAAATGCTTAGA+AGG | + | chr1.3:57136810-57136829 | None:intergenic | 35.0% | |
| GTGATGTATACATGTATGTG+TGG | + | chr1.3:57133757-57133776 | None:intergenic | 35.0% | |
| GTGGGAATAAGAATTGTTTG+CGG | + | chr1.3:57133738-57133757 | None:intergenic | 35.0% | |
| GTTAATTCTCACAGATGAAG+AGG | - | chr1.3:57136919-57136938 | MS.gene43992:intron | 35.0% | |
| TATCAATCTTGAGGAGGATT+AGG | - | chr1.3:57137123-57137142 | MS.gene43992:intron | 35.0% | |
| TGATGAGATCAAAATCGCTA+AGG | - | chr1.3:57133218-57133237 | MS.gene43992:CDS | 35.0% | |
| TGGAGAATCTATCAATCTTG+AGG | - | chr1.3:57137114-57137133 | MS.gene43992:intron | 35.0% | |
| TGTGATGTCTTTCAACTTCT+CGG | - | chr1.3:57135781-57135800 | MS.gene43992:intron | 35.0% | |
| TTAATTGTGTAACAGGCAAC+CGG | - | chr1.3:57135897-57135916 | MS.gene43992:intron | 35.0% | |
| TTACCCAAACGCATTTGAAA+AGG | - | chr1.3:57135296-57135315 | MS.gene43992:intron | 35.0% | |
| TTCAAGCATGTGTTTCTTGT+TGG | + | chr1.3:57136238-57136257 | None:intergenic | 35.0% | |
| TTGAGATAGTGCTATCTGTT+TGG | - | chr1.3:57133370-57133389 | MS.gene43992:intron | 35.0% | |
| TTGATCAGTTCTATAGTGCT+AGG | + | chr1.3:57134026-57134045 | None:intergenic | 35.0% | |
| TTGCAAAATGCTTAGAAGGA+GGG | + | chr1.3:57136806-57136825 | None:intergenic | 35.0% | |
| TTGGTGGAAATCTCAATTTC+TGG | + | chr1.3:57136100-57136119 | None:intergenic | 35.0% | |
| TTGTTATGGCTACTGGATAT+TGG | + | chr1.3:57135971-57135990 | None:intergenic | 35.0% | |
| ! | AAGCCTTTTCAAATGCGTTT+GGG | + | chr1.3:57135302-57135321 | None:intergenic | 35.0% |
| ! | ATGTGTTTCTTGTTGGTTGT+TGG | + | chr1.3:57136231-57136250 | None:intergenic | 35.0% |
| ! | CAACAAAAAGCATGTAGCAA+AGG | + | chr1.3:57133353-57133372 | None:intergenic | 35.0% |
| ! | TAAGCCTTTTCAAATGCGTT+TGG | + | chr1.3:57135303-57135322 | None:intergenic | 35.0% |
| ! | TGAAGTCAAGACAGCTTTAT+TGG | - | chr1.3:57136329-57136348 | MS.gene43992:intron | 35.0% |
| !! | ATGGAGATTTTGTTTGTCAC+AGG | - | chr1.3:57136862-57136881 | MS.gene43992:intron | 35.0% |
| !! | ATGGTGTGAGCTTCTAAAAT+TGG | + | chr1.3:57136119-57136138 | None:intergenic | 35.0% |
| !! | TTCTGGTTCCTATTTCCTAT+CGG | + | chr1.3:57133883-57133902 | None:intergenic | 35.0% |
| !!! | AGGATTGAGTTTTGTTGATG+AGG | + | chr1.3:57136180-57136199 | None:intergenic | 35.0% |
| !!! | GGATTGAGTTTTGTTGATGA+GGG | + | chr1.3:57136179-57136198 | None:intergenic | 35.0% |
| AAAGGTGAATCTGACCAACA+TGG | - | chr1.3:57136429-57136448 | MS.gene43992:intron | 40.0% | |
| AATTGTTACGGTTGTGGTGA+AGG | + | chr1.3:57136018-57136037 | None:intergenic | 40.0% | |
| AGAAACTGTACGTCTCTGTT+TGG | + | chr1.3:57133714-57133733 | None:intergenic | 40.0% | |
| AGAGCAAGAAATGGGTATGT+AGG | - | chr1.3:57136278-57136297 | MS.gene43992:intron | 40.0% | |
| AGATAGCAGAGACATGAGTT+TGG | + | chr1.3:57136378-57136397 | None:intergenic | 40.0% | |
| AGCATGAATGAGAACCAAGA+TGG | + | chr1.3:57136138-57136157 | None:intergenic | 40.0% | |
| AGCTTACCACATAGCTTATG+CGG | + | chr1.3:57135209-57135228 | None:intergenic | 40.0% | |
| AGGTCGTTCGGTTTCAAATA+GGG | - | chr1.3:57136939-57136958 | MS.gene43992:intron | 40.0% | |
| ATTGTTACGGTTGTGGTGAA+GGG | + | chr1.3:57136017-57136036 | None:intergenic | 40.0% | |
| ATTTCCTATCGGGATGATTC+TGG | + | chr1.3:57133872-57133891 | None:intergenic | 40.0% | |
| CAAGAAACACATGCTTGAAG+AGG | - | chr1.3:57136239-57136258 | MS.gene43992:intron | 40.0% | |
| CACACACAGAACAAGTTAAC+AGG | - | chr1.3:57136627-57136646 | MS.gene43992:intron | 40.0% | |
| CTTTGCTAGGTTTGAGGAAA+AGG | - | chr1.3:57135606-57135625 | MS.gene43992:intron | 40.0% | |
| GAATCATCCCGATAGGAAAT+AGG | - | chr1.3:57133872-57133891 | MS.gene43992:intron | 40.0% | |
| GTGGTTGAAGAGCAAGAAAT+GGG | - | chr1.3:57136270-57136289 | MS.gene43992:intron | 40.0% | |
| TGCAAAATGCTTAGAAGGAG+GGG | + | chr1.3:57136805-57136824 | None:intergenic | 40.0% | |
| TGCTAGGAGTTCAAAGTAAG+AGG | + | chr1.3:57134010-57134029 | None:intergenic | 40.0% | |
| TGTCTTTCAACTTCTCGGTT+TGG | - | chr1.3:57135786-57135805 | MS.gene43992:intron | 40.0% | |
| TGTGGTTGAAGAGCAAGAAA+TGG | - | chr1.3:57136269-57136288 | MS.gene43992:intron | 40.0% | |
| TTAGTCACACGCTTAAACAG+TGG | + | chr1.3:57136683-57136702 | None:intergenic | 40.0% | |
| TTTAGAAGCTCACACCATCT+TGG | - | chr1.3:57136121-57136140 | MS.gene43992:intron | 40.0% | |
| TTTGAGGAAAAGGATGAGAG+TGG | - | chr1.3:57135616-57135635 | MS.gene43992:intron | 40.0% | |
| ! | AGAGACATGAGTTTGGTTTC+TGG | + | chr1.3:57136371-57136390 | None:intergenic | 40.0% |
| ! | GAGACATGAGTTTGGTTTCT+GGG | + | chr1.3:57136370-57136389 | None:intergenic | 40.0% |
| ! | TCTGGTTCCTATTTCCTATC+GGG | + | chr1.3:57133882-57133901 | None:intergenic | 40.0% |
| !! | AAAGGTAAAGCGAGTATCGA+AGG | - | chr1.3:57135155-57135174 | MS.gene43992:intron | 40.0% |
| !! | AAGGTAAAGCGAGTATCGAA+GGG | - | chr1.3:57135156-57135175 | MS.gene43992:intron | 40.0% |
| !! | CGAATTTGTTGATGTTCTGC+TGG | + | chr1.3:57133167-57133186 | None:intergenic | 40.0% |
| !! | GTGTGAGCTTCTAAAATTGG+TGG | + | chr1.3:57136116-57136135 | None:intergenic | 40.0% |
| !! | TTGGTGTGGAGGATTTGTTA+TGG | + | chr1.3:57135985-57136004 | None:intergenic | 40.0% |
| AAGCGCTTGAGAGACTGTTT+GGG | - | chr1.3:57134266-57134285 | MS.gene43992:intron | 45.0% | |
| ACAACCAGAATCATCCCGAT+AGG | - | chr1.3:57133865-57133884 | MS.gene43992:intron | 45.0% | |
| ACACGGCACACATGAGAAAA+GGG | + | chr1.3:57135708-57135727 | None:intergenic | 45.0% | |
| ACCACTGTTTAAGCGTGTGA+TGG | + | chr1.3:57136698-57136679 | None:intergenic | 45.0% | |
| AGTAACCTCTCAGACACACA+CGG | + | chr1.3:57135725-57135744 | None:intergenic | 45.0% | |
| ATCCGAAACGGAAGTTACCT+GGG | - | chr1.3:57133137-57133156 | MS.gene43992:CDS | 45.0% | |
| ATTTCCATAAAGGCCCCGTT+TGG | - | chr1.3:57134337-57134356 | MS.gene43992:intron | 45.0% | |
| CAAACCTAGCAAAGAACTCG+AGG | + | chr1.3:57135600-57135619 | None:intergenic | 45.0% | |
| CGAGTTCTTTGCTAGGTTTG+AGG | - | chr1.3:57135600-57135619 | MS.gene43992:intron | 45.0% | |
| CTAAGGATGAAGTAGAGAGC+AGG | - | chr1.3:57136981-57137000 | MS.gene43992:CDS | 45.0% | |
| CTGCTCTCTACTTCATCCTT+AGG | + | chr1.3:57136983-57137002 | None:intergenic | 45.0% | |
| GAGGTCGTTCGGTTTCAAAT+AGG | - | chr1.3:57136938-57136957 | MS.gene43992:intron | 45.0% | |
| GGTATTTGCTCATGTGCCTA+AGG | - | chr1.3:57136964-57136983 | MS.gene43992:CDS | 45.0% | |
| GGTCGTTCGGTTTCAAATAG+GGG | - | chr1.3:57136940-57136959 | MS.gene43992:intron | 45.0% | |
| GTCTCCTTCTCTCTCTCAAA+CGG | - | chr1.3:57135940-57135959 | MS.gene43992:intron | 45.0% | |
| TAAGCGCTTGAGAGACTGTT+TGG | - | chr1.3:57134265-57134284 | MS.gene43992:intron | 45.0% | |
| TAAGCTCCGCATAAGCTATG+TGG | - | chr1.3:57135200-57135219 | MS.gene43992:intron | 45.0% | |
| TCACAGATGAAGAGGTCGTT+CGG | - | chr1.3:57136927-57136946 | MS.gene43992:intron | 45.0% | |
| TCCATCACACGCTTAAACAG+TGG | - | chr1.3:57135855-57135874 | MS.gene43992:intron | 45.0% | |
| TCCCGCAAAAGAACATGCTT+GGG | - | chr1.3:57134115-57134134 | MS.gene43992:intron | 45.0% | |
| TCTTGACCAGATCTCCAACA+CGG | - | chr1.3:57136200-57136219 | MS.gene43992:intron | 45.0% | |
| TGGGAGGAGACTTATTGTTC+CGG | + | chr1.3:57135919-57135938 | None:intergenic | 45.0% | |
| TGTTGGAGATCTGGTCAAGA+AGG | + | chr1.3:57136200-57136219 | None:intergenic | 45.0% | |
| TGTTTGTGATGCGTAAAGGG+AGG | - | chr1.3:57133111-57133130 | MS.gene43992:CDS | 45.0% | |
| TTATCCAAACGGGGCCTTTA+TGG | + | chr1.3:57134344-57134363 | None:intergenic | 45.0% | |
| TTCAGACATCTGAGCAACCA+CGG | + | chr1.3:57137068-57137087 | None:intergenic | 45.0% | |
| TTCCCGCAAAAGAACATGCT+TGG | - | chr1.3:57134114-57134133 | MS.gene43992:intron | 45.0% | |
| TTGACCGTTTGAGAGAGAGA+AGG | + | chr1.3:57135947-57135966 | None:intergenic | 45.0% | |
| TTGCTCTTCAACCACATGCA+TGG | + | chr1.3:57136265-57136284 | None:intergenic | 45.0% | |
| TTGTTACGGTTGTGGTGAAG+GGG | + | chr1.3:57136016-57136035 | None:intergenic | 45.0% | |
| ! | GATGGAGTTTCTGGACTTGT+TGG | - | chr1.3:57136549-57136568 | MS.gene43992:intron | 45.0% |
| ! | TATCGGGATGATTCTGGTTG+TGG | + | chr1.3:57133866-57133885 | None:intergenic | 45.0% |
| ! | TCAAGGAGATCTGCCTTGTT+TGG | + | chr1.3:57135509-57135528 | None:intergenic | 45.0% |
| !! | AGGTAAAGCGAGTATCGAAG+GGG | - | chr1.3:57135157-57135176 | MS.gene43992:intron | 45.0% |
| !! | GAGTTTCTGGACTTGTTGGA+TGG | - | chr1.3:57136553-57136572 | MS.gene43992:intron | 45.0% |
| !! | GGAGGATTTGTTATGGCTAC+TGG | + | chr1.3:57135978-57135997 | None:intergenic | 45.0% |
| !! | AAAATAAATAAATAAAAACT+AGG | - | chr1.3:57136602-57136621 | MS.gene43992:intron | 5.0% |
| !! | AAATAAATAAATAAAAACTA+GGG | - | chr1.3:57136603-57136622 | MS.gene43992:intron | 5.0% |
| AAAGGGAGGAGGATCCGAAA+CGG | - | chr1.3:57133125-57133144 | MS.gene43992:CDS | 50.0% | |
| AAGAACATGCTTGGGGGTGA+TGG | - | chr1.3:57134123-57134142 | MS.gene43992:intron | 50.0% | |
| AAGAACTCGAGGTAGGCAAC+AGG | + | chr1.3:57135589-57135608 | None:intergenic | 50.0% | |
| CACACGGCACACATGAGAAA+AGG | + | chr1.3:57135709-57135728 | None:intergenic | 50.0% | |
| CCCGCAAAAGAACATGCTTG+GGG | - | chr1.3:57134116-57134135 | MS.gene43992:intron | 50.0% | |
| CCGCAAAAGAACATGCTTGG+GGG | - | chr1.3:57134117-57134136 | MS.gene43992:intron | 50.0% | |
| CCTACCTCGAGTTCTTTGCT+AGG | - | chr1.3:57135593-57135612 | MS.gene43992:intron | 50.0% | |
| CCTAGCAAAGAACTCGAGGT+AGG | + | chr1.3:57135596-57135615 | None:intergenic | 50.0% | |
| CGTTCGGTTTCAAATAGGGG+AGG | - | chr1.3:57136943-57136962 | MS.gene43992:intron | 50.0% | |
| CTCCCAGGTAACTTCCGTTT+CGG | + | chr1.3:57133142-57133161 | None:intergenic | 50.0% | |
| GATCCGAAACGGAAGTTACC+TGG | - | chr1.3:57133136-57133155 | MS.gene43992:CDS | 50.0% | |
| TGAGAGAGAGAAGGAGACGT+GGG | + | chr1.3:57135938-57135957 | None:intergenic | 50.0% | |
| TGAGGAGGAGAAACAATCCG+TGG | - | chr1.3:57137048-57137067 | MS.gene43992:intron | 50.0% | |
| TGGTGAAGGGGAATTCAGCT+TGG | + | chr1.3:57136004-57136023 | None:intergenic | 50.0% | |
| TTGAGAGAGAGAAGGAGACG+TGG | + | chr1.3:57135939-57135958 | None:intergenic | 50.0% | |
| TTGTGATGCGTAAAGGGAGG+AGG | - | chr1.3:57133114-57133133 | MS.gene43992:CDS | 50.0% | |
| ! | AAGGGGAATTCAGCTTGGTG+TGG | + | chr1.3:57135999-57136018 | None:intergenic | 50.0% |
| ! | CCCCAAGCATGTTCTTTTGC+GGG | + | chr1.3:57134119-57134138 | None:intergenic | 50.0% |
| ! | CCCCCAAGCATGTTCTTTTG+CGG | + | chr1.3:57134120-57134139 | None:intergenic | 50.0% |
| ! | GGGATGATTCTGGTTGTGGT+GGG | + | chr1.3:57133862-57133881 | None:intergenic | 50.0% |
| !! | GCGAATCGCTGATAACGGAT+AGG | + | chr1.3:57133682-57133701 | None:intergenic | 50.0% |
| !! | GGTAAAGCGAGTATCGAAGG+GGG | - | chr1.3:57135158-57135177 | MS.gene43992:intron | 50.0% |
| ATGGAGAGTTTGGCCCCGTT+TGG | + | chr1.3:57135368-57135387 | None:intergenic | 55.0% | |
| CGAAACGGAAGTTACCTGGG+AGG | - | chr1.3:57133140-57133159 | MS.gene43992:CDS | 55.0% | |
| GAGTTTGGCCCCGTTTGGAT+TGG | + | chr1.3:57135363-57135382 | None:intergenic | 55.0% | |
| GCTTGAAGAGGCCATGCATG+TGG | - | chr1.3:57136251-57136270 | MS.gene43992:intron | 55.0% | |
| GTGTTGCCGTGTTGGAGATC+TGG | + | chr1.3:57136209-57136228 | None:intergenic | 55.0% | |
| ! | CGGGATGATTCTGGTTGTGG+TGG | + | chr1.3:57133863-57133882 | None:intergenic | 55.0% |
| !! | GGGAATTCAGCTTGGTGTGG+AGG | + | chr1.3:57135996-57136015 | None:intergenic | 55.0% |
| !! | GGTTGTTGGTGTTGCCGTGT+TGG | + | chr1.3:57136217-57136236 | None:intergenic | 55.0% |
| GAGAGAGAAGGAGACGTGGG+AGG | + | chr1.3:57135935-57135954 | None:intergenic | 60.0% | |
| GATGTTCTGCTGGTCCTCCC+AGG | + | chr1.3:57133157-57133176 | None:intergenic | 60.0% | |
| GCGGGAAGTCTAGCACATCG+AGG | + | chr1.3:57134101-57134120 | None:intergenic | 60.0% | |
| GTGTGCCGTGTGTGTCTGAG+AGG | - | chr1.3:57135717-57135736 | MS.gene43992:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 57133039 | 57137144 | 57133039 | ID=MS.gene43992 |
| chr1.3 | mRNA | 57133039 | 57137144 | 57133039 | ID=MS.gene43992.t1;Parent=MS.gene43992 |
| chr1.3 | exon | 57137136 | 57137144 | 57137136 | ID=MS.gene43992.t1.exon1;Parent=MS.gene43992.t1 |
| chr1.3 | CDS | 57137136 | 57137144 | 57137136 | ID=cds.MS.gene43992.t1;Parent=MS.gene43992.t1 |
| chr1.3 | exon | 57136944 | 57137054 | 57136944 | ID=MS.gene43992.t1.exon2;Parent=MS.gene43992.t1 |
| chr1.3 | CDS | 57136944 | 57137054 | 57136944 | ID=cds.MS.gene43992.t1;Parent=MS.gene43992.t1 |
| chr1.3 | exon | 57133039 | 57133299 | 57133039 | ID=MS.gene43992.t1.exon3;Parent=MS.gene43992.t1 |
| chr1.3 | CDS | 57133039 | 57133299 | 57133039 | ID=cds.MS.gene43992.t1;Parent=MS.gene43992.t1 |
| Gene Sequence |
| Protein sequence |
