Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057267.t1 | XP_003602410.1 | 97.1 | 420 | 12 | 0 | 1 | 420 | 1 | 420 | 2.40E-233 | 817.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057267.t1 | Q7XUA8 | 63.4 | 382 | 139 | 1 | 38 | 419 | 35 | 415 | 9.7e-143 | 508.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057267.t1 | Q0GXX5 | 97.1 | 420 | 12 | 0 | 1 | 420 | 1 | 420 | 1.7e-233 | 817.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057267 | MS.gene06588 | 0.950671 | 1.02E-108 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013805 | MS.gene057267 | PPI |
| MS.gene057267 | MS.gene02587 | PPI |
| MS.gene057267 | MS.gene069897 | PPI |
| MS.gene057267 | MS.gene85176 | PPI |
| MS.gene057267 | MS.gene045055 | PPI |
| MS.gene057267 | MS.gene36383 | PPI |
| MS.gene057267 | MS.gene76562 | PPI |
| MS.gene057267 | MS.gene85177 | PPI |
| MS.gene057267 | MS.gene069896 | PPI |
| MS.gene76565 | MS.gene057267 | PPI |
| MS.gene057267 | MS.gene85178 | PPI |
| MS.gene057267 | MS.gene73784 | PPI |
| MS.gene057267 | MS.gene072157 | PPI |
| MS.gene057267 | MS.gene069898 | PPI |
| MS.gene057267 | MS.gene76566 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057267.t1 | MTR_3g093030 | 97.143 | 420 | 12 | 0 | 1 | 420 | 1 | 420 | 0.0 | 848 |
| MS.gene057267.t1 | MTR_3g088590 | 52.580 | 407 | 187 | 2 | 18 | 418 | 69 | 475 | 2.24e-147 | 427 |
| MS.gene057267.t1 | MTR_2g100560 | 52.196 | 387 | 183 | 2 | 30 | 415 | 49 | 434 | 3.60e-144 | 418 |
| MS.gene057267.t1 | MTR_8g062790 | 49.289 | 422 | 203 | 4 | 7 | 420 | 12 | 430 | 1.24e-142 | 414 |
| MS.gene057267.t1 | MTR_2g100510 | 51.554 | 386 | 187 | 0 | 30 | 415 | 44 | 429 | 4.11e-141 | 410 |
| MS.gene057267.t1 | MTR_8g015510 | 49.644 | 421 | 205 | 4 | 5 | 418 | 11 | 431 | 2.45e-140 | 408 |
| MS.gene057267.t1 | MTR_2g097530 | 50.518 | 386 | 191 | 0 | 30 | 415 | 44 | 429 | 3.40e-140 | 408 |
| MS.gene057267.t1 | MTR_2g097540 | 47.962 | 417 | 214 | 1 | 4 | 417 | 11 | 427 | 8.74e-140 | 407 |
| MS.gene057267.t1 | MTR_2g100520 | 46.172 | 418 | 217 | 2 | 6 | 415 | 12 | 429 | 1.60e-135 | 396 |
| MS.gene057267.t1 | MTR_8g075310 | 49.215 | 382 | 177 | 2 | 30 | 411 | 49 | 413 | 8.24e-132 | 386 |
| MS.gene057267.t1 | MTR_8g015510 | 50.804 | 311 | 151 | 2 | 110 | 418 | 1 | 311 | 2.35e-101 | 305 |
| MS.gene057267.t1 | MTR_8g063060 | 41.748 | 309 | 148 | 7 | 108 | 413 | 58 | 337 | 1.86e-65 | 214 |
| MS.gene057267.t1 | MTR_3g093040 | 81.818 | 99 | 8 | 1 | 123 | 211 | 1 | 99 | 5.05e-46 | 161 |
| MS.gene057267.t1 | MTR_2g100550 | 58.120 | 117 | 49 | 0 | 38 | 154 | 48 | 164 | 1.72e-43 | 160 |
| MS.gene057267.t1 | MTR_1g028070 | 45.614 | 114 | 62 | 0 | 141 | 254 | 14 | 127 | 3.01e-26 | 102 |
| MS.gene057267.t1 | MTR_3g077040 | 35.821 | 134 | 62 | 2 | 123 | 256 | 1 | 110 | 3.40e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057267.t1 | AT5G54140 | 58.173 | 416 | 171 | 2 | 4 | 418 | 7 | 420 | 3.78e-173 | 491 |
| MS.gene057267.t1 | AT3G02875 | 50.251 | 398 | 196 | 1 | 23 | 418 | 33 | 430 | 2.50e-146 | 424 |
| MS.gene057267.t1 | AT1G51760 | 49.279 | 416 | 207 | 2 | 6 | 417 | 10 | 425 | 3.14e-144 | 418 |
| MS.gene057267.t1 | AT1G51780 | 49.282 | 418 | 208 | 2 | 6 | 419 | 10 | 427 | 3.24e-142 | 413 |
| MS.gene057267.t1 | AT5G56660 | 52.105 | 380 | 179 | 2 | 38 | 417 | 49 | 425 | 2.13e-137 | 400 |
| MS.gene057267.t1 | AT5G56650 | 50.000 | 380 | 187 | 2 | 38 | 417 | 48 | 424 | 9.81e-130 | 381 |
| MS.gene057267.t1 | AT1G44350 | 51.500 | 400 | 187 | 2 | 20 | 417 | 67 | 461 | 6.46e-128 | 377 |
| MS.gene057267.t1 | AT3G02875 | 53.405 | 279 | 128 | 1 | 23 | 299 | 33 | 311 | 6.25e-105 | 314 |
| MS.gene057267.t1 | AT5G56650 | 55.513 | 263 | 115 | 1 | 38 | 300 | 48 | 308 | 6.94e-101 | 303 |
| MS.gene057267.t1 | AT3G02875 | 54.661 | 236 | 105 | 1 | 23 | 256 | 33 | 268 | 1.32e-88 | 271 |
Find 82 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCTTGGAAAGCCAATTC+TGG | 0.188078 | 3.2:+78229903 | None:intergenic |
| ATCCCATCATATGTAAAATT+TGG | 0.213215 | 3.2:-78227620 | MS.gene057267:CDS |
| GGCTACATCATTGGCAATAT+TGG | 0.222385 | 3.2:-78228288 | MS.gene057267:CDS |
| GCTCATGCTACTATGCTATT+AGG | 0.227578 | 3.2:-78229361 | MS.gene057267:CDS |
| TTCGCCTACCATCGCCTTCT+TGG | 0.228788 | 3.2:+78226178 | None:intergenic |
| ACTGGTATTGTTGCTCAAAT+TGG | 0.240045 | 3.2:-78229810 | MS.gene057267:CDS |
| CTCATGCTACTATGCTATTA+GGG | 0.260514 | 3.2:-78229360 | MS.gene057267:CDS |
| CATCGCTATTCGTGCTGATA+TGG | 0.271047 | 3.2:-78229769 | MS.gene057267:CDS |
| TAAAATTTGGAGGTACATTA+AGG | 0.276884 | 3.2:-78227607 | MS.gene057267:CDS |
| GGGCACTTGTGTTGTGTTCT+TGG | 0.285265 | 3.2:+78229889 | None:intergenic |
| TATGGATGCACTCCCTTTGC+AGG | 0.301563 | 3.2:-78229751 | MS.gene057267:intron |
| TTGGCTTCATGAACATTGTC+TGG | 0.313081 | 3.2:+78226197 | None:intergenic |
| ATGCATCCAGCAGCTGTAAA+AGG | 0.313338 | 3.2:+78228380 | None:intergenic |
| TTAGCAACTGGATATGTATA+AGG | 0.319340 | 3.2:+78229834 | None:intergenic |
| ATTGTTGCTCAAATTGGTTC+TGG | 0.333604 | 3.2:-78229804 | MS.gene057267:CDS |
| TCATTGACAACAGCAGGATA+TGG | 0.358726 | 3.2:+78226269 | None:intergenic |
| GGTACATGCTTTCCGTTGTC+TGG | 0.362605 | 3.2:+78227582 | None:intergenic |
| GATGAGGAAGCTCTTTCAAT+TGG | 0.378444 | 3.2:-78226047 | MS.gene057267:CDS |
| GATTCATCAACACCCAGAAT+TGG | 0.394773 | 3.2:-78229916 | MS.gene057267:CDS |
| GGAGCTATAGCATCGATTCC+AGG | 0.399066 | 3.2:-78228404 | MS.gene057267:CDS |
| CCAATGGAAAACAATATTCC+AGG | 0.411904 | 3.2:+78226128 | None:intergenic |
| ACATATCCAGTTGCTAAAAC+TGG | 0.412373 | 3.2:-78229828 | MS.gene057267:CDS |
| TGTCAAGTTCACTGCGGATA+AGG | 0.413444 | 3.2:+78229868 | None:intergenic |
| GTTCTTGGAAAGCCAATTCT+GGG | 0.436845 | 3.2:+78229904 | None:intergenic |
| TCCACTACTGGCTACATCAT+TGG | 0.441186 | 3.2:-78228297 | MS.gene057267:CDS |
| CCTCTAGCTCCCTCCTCAGC+AGG | 0.446876 | 3.2:+78228509 | None:intergenic |
| CGCAGTGAACTTGACAAACT+TGG | 0.449993 | 3.2:-78229861 | MS.gene057267:CDS |
| ATGCACTTCCCTTTGTACCT+TGG | 0.451159 | 3.2:-78230018 | MS.gene057267:CDS |
| ATCAGCACGAATAGCGATGA+TGG | 0.452920 | 3.2:+78229773 | None:intergenic |
| TTTGCAGGTTATTGAAGGAC+AGG | 0.461465 | 3.2:-78226345 | MS.gene057267:intron |
| TTTCTCATTTCTGATTCCAA+TGG | 0.462714 | 3.2:+78226112 | None:intergenic |
| GTCAAGTTCACTGCGGATAA+GGG | 0.470836 | 3.2:+78229869 | None:intergenic |
| TAATATTTGCAGGTTATTGA+AGG | 0.475540 | 3.2:-78226350 | MS.gene057267:intron |
| ATTGATGCTACGACATCTAC+TGG | 0.492280 | 3.2:-78228425 | MS.gene057267:CDS |
| AGAGTTGGCCGACTTCTGCT+TGG | 0.497776 | 3.2:-78226221 | MS.gene057267:CDS |
| TTTCAGACAGCGATTAAAAG+AGG | 0.503463 | 3.2:-78227558 | MS.gene057267:intron |
| TCAGCGCAAAGATAAGCTTA+AGG | 0.505619 | 3.2:-78229320 | MS.gene057267:intron |
| CACTGCAACAGCTTGTCTCA+AGG | 0.507821 | 3.2:-78228265 | MS.gene057267:CDS |
| CCAGCAGCTGTAAAAGGCCC+TGG | 0.508450 | 3.2:+78228386 | None:intergenic |
| AAACACAATAAGTACATGAA+TGG | 0.518642 | 3.2:+78230046 | None:intergenic |
| TGGTTAGGAACTTGTTGAGT+GGG | 0.518955 | 3.2:-78229431 | MS.gene057267:intron |
| CCATCATATGTAAAATTTGG+AGG | 0.522089 | 3.2:-78227617 | MS.gene057267:CDS |
| GATTCTGAGTTCAGCCCAGA+AGG | 0.530256 | 3.2:-78229970 | MS.gene057267:CDS |
| CATCTACATGTCGAGAGAGT+TGG | 0.530513 | 3.2:-78226236 | MS.gene057267:CDS |
| GGAATCAGAAATGAGAAAGT+AGG | 0.531619 | 3.2:-78226107 | MS.gene057267:CDS |
| GCCTCACAAATGATAAAAGA+AGG | 0.534222 | 3.2:-78228485 | MS.gene057267:CDS |
| GAATACAAGAGCAAAATTGA+TGG | 0.536081 | 3.2:-78229409 | MS.gene057267:CDS |
| GTAGTGGATCTACAGTCTGG+TGG | 0.536999 | 3.2:+78228312 | None:intergenic |
| ACACTTCACCAAGGTACAAA+GGG | 0.537229 | 3.2:+78230010 | None:intergenic |
| CCAGTAGTGGATCTACAGTC+TGG | 0.538838 | 3.2:+78228309 | None:intergenic |
| AGCTGCTGGATGCATCTTTG+AGG | 0.539162 | 3.2:-78228372 | MS.gene057267:CDS |
| CAATGTTCATGAAGCCAAGA+AGG | 0.540814 | 3.2:-78226192 | MS.gene057267:CDS |
| ACTGCAACAGCTTGTCTCAA+GGG | 0.552626 | 3.2:-78228264 | MS.gene057267:CDS |
| TAAAGTGGGGTAACCTGCAA+AGG | 0.552801 | 3.2:+78229738 | None:intergenic |
| GCCAATGATGTAGCCAGTAG+TGG | 0.554312 | 3.2:+78228296 | None:intergenic |
| ATATGTTGATTTCAAAGAAG+AGG | 0.556877 | 3.2:-78226300 | MS.gene057267:CDS |
| TAGTGGATCTACAGTCTGGT+GGG | 0.558827 | 3.2:+78228313 | None:intergenic |
| CACACTTCACCAAGGTACAA+AGG | 0.561395 | 3.2:+78230009 | None:intergenic |
| GAGCTATAGCATCGATTCCA+GGG | 0.569617 | 3.2:-78228403 | MS.gene057267:CDS |
| CCAGACTGTAGATCCACTAC+TGG | 0.574441 | 3.2:-78228309 | MS.gene057267:CDS |
| TAGCTCCCTCCTCAGCAGGT+TGG | 0.580361 | 3.2:+78228513 | None:intergenic |
| GTGGATCTACAGTCTGGTGG+GGG | 0.591638 | 3.2:+78228315 | None:intergenic |
| CCTGCTGAGGAGGGAGCTAG+AGG | 0.592496 | 3.2:-78228509 | MS.gene057267:CDS |
| CTGTCTGTTACTTATGTCAA+AGG | 0.595485 | 3.2:-78227662 | MS.gene057267:CDS |
| CAACATATGCATTACATCTG+TGG | 0.596314 | 3.2:+78226315 | None:intergenic |
| AGTGGATCTACAGTCTGGTG+GGG | 0.597884 | 3.2:+78228314 | None:intergenic |
| CTGTTACTTATGTCAAAGGA+GGG | 0.601374 | 3.2:-78227658 | MS.gene057267:CDS |
| AAAGTGGGGTAACCTGCAAA+GGG | 0.604350 | 3.2:+78229739 | None:intergenic |
| GAAGCCAAGAAGGCGATGGT+AGG | 0.605651 | 3.2:-78226182 | MS.gene057267:CDS |
| GCACATACTTGACTATGAAG+AGG | 0.609774 | 3.2:+78228233 | None:intergenic |
| TACATTAAGGAGCCAGACAA+CGG | 0.609890 | 3.2:-78227594 | MS.gene057267:CDS |
| TCAGCACGAATAGCGATGAT+GGG | 0.611137 | 3.2:+78229774 | None:intergenic |
| TCTGTTACTTATGTCAAAGG+AGG | 0.632862 | 3.2:-78227659 | MS.gene057267:CDS |
| AACAGCAGGATATGGCGTGA+AGG | 0.641655 | 3.2:+78226277 | None:intergenic |
| TGTCTGGACCAAGCAGAAGT+CGG | 0.643080 | 3.2:+78226213 | None:intergenic |
| TGTTACTTATGTCAAAGGAG+GGG | 0.643945 | 3.2:-78227657 | MS.gene057267:CDS |
| TCATGAAGCCAAGAAGGCGA+TGG | 0.652120 | 3.2:-78226186 | MS.gene057267:CDS |
| GATGGCAGAATGCATGCTTG+TGG | 0.663638 | 3.2:-78229391 | MS.gene057267:CDS |
| TCATGCTACTATGCTATTAG+GGG | 0.665400 | 3.2:-78229359 | MS.gene057267:CDS |
| TTGGTTAGGAACTTGTTGAG+TGG | 0.677704 | 3.2:-78229432 | MS.gene057267:intron |
| ATAAGCATCACACTTCACCA+AGG | 0.746407 | 3.2:+78230001 | None:intergenic |
| CAAGTTTGTCAAGTTCACTG+CGG | 0.769058 | 3.2:+78229862 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCATTTATATAAGCTTA+GGG | - | chr3.2:78228271-78228290 | MS.gene057267:CDS | 15.0% |
| !! | TATTTCATTTATATAAGCTT+AGG | - | chr3.2:78228270-78228289 | MS.gene057267:CDS | 15.0% |
| !!! | AGAATATTGTTTTTCAAATA+AGG | - | chr3.2:78226561-78226580 | MS.gene057267:intron | 15.0% |
| !!! | TATTATTTTTTATCTGATCT+TGG | - | chr3.2:78226584-78226603 | MS.gene057267:intron | 15.0% |
| !! | AAAACCTAGAAAAGATAAAT+GGG | + | chr3.2:78228962-78228981 | None:intergenic | 20.0% |
| !! | AAAACCTAGAAAAGATTAAT+GGG | + | chr3.2:78229218-78229237 | None:intergenic | 20.0% |
| !! | AAATGAATTGTGAAATAGTT+TGG | - | chr3.2:78226990-78227009 | MS.gene057267:intron | 20.0% |
| !! | ACTCTTTGGTATTAATTAAA+GGG | - | chr3.2:78227491-78227510 | MS.gene057267:intron | 20.0% |
| !! | ATAAATGATGATATCTAAAC+TGG | + | chr3.2:78228524-78228543 | None:intergenic | 20.0% |
| !! | ATAAGCTAAACAAGATTTAT+AGG | + | chr3.2:78229666-78229685 | None:intergenic | 20.0% |
| !! | TAAAACCTAGAAAAGATAAA+TGG | + | chr3.2:78228963-78228982 | None:intergenic | 20.0% |
| !! | TACTCTTTGGTATTAATTAA+AGG | - | chr3.2:78227490-78227509 | MS.gene057267:intron | 20.0% |
| !! | TATTGATAGATAATATTTGC+AGG | - | chr3.2:78229685-78229704 | MS.gene057267:intron | 20.0% |
| !! | TCACCTTAATTTCAAATTAA+GGG | + | chr3.2:78228809-78228828 | None:intergenic | 20.0% |
| !! | TTCACCTTAATTTCAAATTA+AGG | + | chr3.2:78228810-78228829 | None:intergenic | 20.0% |
| !! | TTTAATTAATACCAAAGAGT+AGG | + | chr3.2:78227491-78227510 | None:intergenic | 20.0% |
| !!! | AACATTAGGTTTATACATTT+TGG | + | chr3.2:78227265-78227284 | None:intergenic | 20.0% |
| !!! | GTTGATTTATTTTATCCTAA+AGG | + | chr3.2:78227300-78227319 | None:intergenic | 20.0% |
| !!! | TAAACTTTTATTCAAATGCT+TGG | - | chr3.2:78227939-78227958 | MS.gene057267:intron | 20.0% |
| !!! | TGAGTTGAACAATAAATTTA+AGG | - | chr3.2:78226437-78226456 | MS.gene057267:intron | 20.0% |
| ! | AAACACAATAAGTACATGAA+TGG | + | chr3.2:78226002-78226021 | None:intergenic | 25.0% |
| ! | AATCAAATTCTAGCATACAA+GGG | + | chr3.2:78228162-78228181 | None:intergenic | 25.0% |
| ! | ATATAAAAACTTAACCCACT+TGG | - | chr3.2:78229407-78229426 | MS.gene057267:CDS | 25.0% |
| ! | ATCCCATCATATGTAAAATT+TGG | - | chr3.2:78228425-78228444 | MS.gene057267:CDS | 25.0% |
| ! | CAAAACCTAGAAAAGATTAA+TGG | + | chr3.2:78229219-78229238 | None:intergenic | 25.0% |
| ! | CAAATATTTACAAGGATTTG+AGG | + | chr3.2:78227034-78227053 | None:intergenic | 25.0% |
| ! | GTTATGTTTGTATGTATTTC+TGG | - | chr3.2:78226409-78226428 | MS.gene057267:intron | 25.0% |
| ! | TAATATTTGCAGGTTATTGA+AGG | - | chr3.2:78229695-78229714 | MS.gene057267:intron | 25.0% |
| ! | TAGAAGAATGCATTAAAGTA+TGG | + | chr3.2:78228194-78228213 | None:intergenic | 25.0% |
| ! | TATAAAAACTTAACCCACTT+GGG | - | chr3.2:78229408-78229427 | MS.gene057267:CDS | 25.0% |
| ! | TGTCAATAGAAAATGCATAA+AGG | - | chr3.2:78228649-78228668 | MS.gene057267:intron | 25.0% |
| !! | ACAACTAAGAATTGATTCTA+AGG | + | chr3.2:78226505-78226524 | None:intergenic | 25.0% |
| !! | ATATCCCATTAATCTTTTCT+AGG | - | chr3.2:78229211-78229230 | MS.gene057267:intron | 25.0% |
| !! | ATATCCCATTTATCTTTTCT+AGG | - | chr3.2:78228955-78228974 | MS.gene057267:intron | 25.0% |
| !! | CTCCAAATTTTACATATGAT+GGG | + | chr3.2:78228430-78228449 | None:intergenic | 25.0% |
| !! | CTTGTTACAATACTCATTTT+TGG | - | chr3.2:78228738-78228757 | MS.gene057267:intron | 25.0% |
| !! | GAAGTTATACTAACTCTTTT+TGG | + | chr3.2:78228314-78228333 | None:intergenic | 25.0% |
| !! | TAAAATTTGGAGGTACATTA+AGG | - | chr3.2:78228438-78228457 | MS.gene057267:CDS | 25.0% |
| !! | TTTTATCAAGAAGTAATTCC+TGG | - | chr3.2:78229899-78229918 | MS.gene057267:CDS | 25.0% |
| !!! | AAGAATTGATTCTAAGGTAA+CGG | + | chr3.2:78226499-78226518 | None:intergenic | 25.0% |
| !!! | ACTATTGTTCTAGAACTATT+TGG | - | chr3.2:78228984-78229003 | MS.gene057267:intron | 25.0% |
| !!! | ATATGTTGATTTCAAAGAAG+AGG | - | chr3.2:78229745-78229764 | MS.gene057267:intron | 25.0% |
| !!! | CAAGATTTATAGGTTTTGTA+TGG | + | chr3.2:78229656-78229675 | None:intergenic | 25.0% |
| !!! | CTATTGTTCTAGAACTATTT+GGG | - | chr3.2:78228985-78229004 | MS.gene057267:intron | 25.0% |
| !!! | TATAAGCTAATGGATTTTCT+TGG | - | chr3.2:78227107-78227126 | MS.gene057267:intron | 25.0% |
| AAAAATAGTATGTCACACAG+TGG | - | chr3.2:78228100-78228119 | MS.gene057267:intron | 30.0% | |
| AGAATATTTCAGAAAGCTTG+TGG | - | chr3.2:78229296-78229315 | MS.gene057267:intron | 30.0% | |
| AGATAAACACTTACCAGATA+AGG | + | chr3.2:78229607-78229626 | None:intergenic | 30.0% | |
| AGGCTAAAAAACAATTGTAG+AGG | - | chr3.2:78226457-78226476 | MS.gene057267:intron | 30.0% | |
| AGGTTAAGTAGTTATTAGCA+AGG | + | chr3.2:78227065-78227084 | None:intergenic | 30.0% | |
| ATCAACAATTCAAGTACAGT+TGG | + | chr3.2:78228924-78228943 | None:intergenic | 30.0% | |
| ATTAGCTGAAAAACAGCTTA+TGG | + | chr3.2:78229091-78229110 | None:intergenic | 30.0% | |
| CAATCAAATTCTAGCATACA+AGG | + | chr3.2:78228163-78228182 | None:intergenic | 30.0% | |
| CACATTGAGTTAGTTCATTA+GGG | + | chr3.2:78226939-78226958 | None:intergenic | 30.0% | |
| CCAAACATACACTATTCTTA+TGG | - | chr3.2:78226529-78226548 | MS.gene057267:intron | 30.0% | |
| CCATAAGAATAGTGTATGTT+TGG | + | chr3.2:78226532-78226551 | None:intergenic | 30.0% | |
| CCATCATATGTAAAATTTGG+AGG | - | chr3.2:78228428-78228447 | MS.gene057267:CDS | 30.0% | |
| CCTTAATTTCAAATTAAGGG+AGG | + | chr3.2:78228806-78228825 | None:intergenic | 30.0% | |
| CTACAATGTGATTAAGATTG+AGG | - | chr3.2:78226817-78226836 | MS.gene057267:intron | 30.0% | |
| CTCAATCTTAATCACATTGT+AGG | + | chr3.2:78226819-78226838 | None:intergenic | 30.0% | |
| CTGAATCTGATATAAGCTAA+TGG | - | chr3.2:78227097-78227116 | MS.gene057267:intron | 30.0% | |
| CTGAGATGCAAATATTTACA+AGG | + | chr3.2:78227042-78227061 | None:intergenic | 30.0% | |
| CTTCACAGCTGAAAAAATAA+TGG | + | chr3.2:78228878-78228897 | None:intergenic | 30.0% | |
| CTTGTATGCTAGAATTTGAT+TGG | - | chr3.2:78228161-78228180 | MS.gene057267:intron | 30.0% | |
| CTTTCAATGAACTTATGATC+CGG | + | chr3.2:78227180-78227199 | None:intergenic | 30.0% | |
| GAAAAACAATATTCTCCTCA+AGG | + | chr3.2:78226556-78226575 | None:intergenic | 30.0% | |
| GAATACAAGAGCAAAATTGA+TGG | - | chr3.2:78226636-78226655 | MS.gene057267:intron | 30.0% | |
| GATAAACACTTACCAGATAA+GGG | + | chr3.2:78229606-78229625 | None:intergenic | 30.0% | |
| GTGACAATAAGCATTATTCT+AGG | + | chr3.2:78228057-78228076 | None:intergenic | 30.0% | |
| TAATGGCAGAGAGAAAATAT+TGG | + | chr3.2:78228861-78228880 | None:intergenic | 30.0% | |
| TATGACAAATCCACAAGTTT+GGG | + | chr3.2:78227914-78227933 | None:intergenic | 30.0% | |
| TTAAATATCGGTCACAGTAA+CGG | + | chr3.2:78226904-78226923 | None:intergenic | 30.0% | |
| TTAGCAACTGGATATGTATA+AGG | + | chr3.2:78226214-78226233 | None:intergenic | 30.0% | |
| TTAGCTTATAGCTTAACTAC+TGG | - | chr3.2:78229009-78229028 | MS.gene057267:intron | 30.0% | |
| TTATGACAAATCCACAAGTT+TGG | + | chr3.2:78227915-78227934 | None:intergenic | 30.0% | |
| TTTCTCATTTCTGATTCCAA+TGG | + | chr3.2:78229936-78229955 | None:intergenic | 30.0% | |
| ! | AAGCATTATTCTAGGAATCA+TGG | + | chr3.2:78228049-78228068 | None:intergenic | 30.0% |
| ! | AAGTAGATCTTTTCTTCTGT+TGG | - | chr3.2:78227392-78227411 | MS.gene057267:intron | 30.0% |
| ! | ATAAATGGGATATGCACTTT+TGG | + | chr3.2:78228948-78228967 | None:intergenic | 30.0% |
| ! | CCTCCAAATTTTACATATGA+TGG | + | chr3.2:78228431-78228450 | None:intergenic | 30.0% |
| ! | CCTCCCTTAATTTGAAATTA+AGG | - | chr3.2:78228803-78228822 | MS.gene057267:intron | 30.0% |
| ! | GAGGAAAAGAGAACATATTT+TGG | + | chr3.2:78228787-78228806 | None:intergenic | 30.0% |
| ! | GATGTTTTCATAAGCTATCA+TGG | + | chr3.2:78229126-78229145 | None:intergenic | 30.0% |
| ! | TCCTTCTTTTATCATTTGTG+AGG | + | chr3.2:78227564-78227583 | None:intergenic | 30.0% |
| ! | TTGAATTGTCTTTTGCTTAG+TGG | - | chr3.2:78227342-78227361 | MS.gene057267:intron | 30.0% |
| ! | TTTTATATAGCTAGCAGTCT+AGG | - | chr3.2:78227984-78228003 | MS.gene057267:intron | 30.0% |
| !! | AGAATTGATTCTAAGGTAAC+GGG | + | chr3.2:78226498-78226517 | None:intergenic | 30.0% |
| !! | ATCTTTGAGGCAAAAATTGA+AGG | - | chr3.2:78227686-78227705 | MS.gene057267:intron | 30.0% |
| !!! | AAACTGTTAGCTTTTGTCTT+AGG | - | chr3.2:78228828-78228847 | MS.gene057267:intron | 30.0% |
| !!! | ATGCTCAGGGTTTTAAATAT+CGG | + | chr3.2:78226916-78226935 | None:intergenic | 30.0% |
| AACCATAGATATGTTGCAAG+TGG | + | chr3.2:78228596-78228615 | None:intergenic | 35.0% | |
| ACATATCCAGTTGCTAAAAC+TGG | - | chr3.2:78226217-78226236 | MS.gene057267:CDS | 35.0% | |
| ACTGGTATTGTTGCTCAAAT+TGG | - | chr3.2:78226235-78226254 | MS.gene057267:CDS | 35.0% | |
| ATGACAAATCCACAAGTTTG+GGG | + | chr3.2:78227913-78227932 | None:intergenic | 35.0% | |
| ATTGTTGCAACTAAAAGCCA+TGG | + | chr3.2:78227874-78227893 | None:intergenic | 35.0% | |
| CAACATATGCATTACATCTG+TGG | + | chr3.2:78229733-78229752 | None:intergenic | 35.0% | |
| CACACTTAGCATGAACAATA+AGG | + | chr3.2:78226965-78226984 | None:intergenic | 35.0% | |
| CCAATGGAAAACAATATTCC+AGG | + | chr3.2:78229920-78229939 | None:intergenic | 35.0% | |
| CCACATTGAGTTAGTTCATT+AGG | + | chr3.2:78226940-78226959 | None:intergenic | 35.0% | |
| CCTAATGAACTAACTCAATG+TGG | - | chr3.2:78226937-78226956 | MS.gene057267:intron | 35.0% | |
| CTCATGCTACTATGCTATTA+GGG | - | chr3.2:78226685-78226704 | MS.gene057267:intron | 35.0% | |
| CTGATATACAAACCCTTATC+TGG | - | chr3.2:78229591-78229610 | MS.gene057267:intron | 35.0% | |
| GACAACTGACCATCATATAT+TGG | - | chr3.2:78228351-78228370 | MS.gene057267:CDS | 35.0% | |
| GCCTCACAAATGATAAAAGA+AGG | - | chr3.2:78227560-78227579 | MS.gene057267:CDS | 35.0% | |
| GGAACAAAGAGCTAAACATT+AGG | + | chr3.2:78227279-78227298 | None:intergenic | 35.0% | |
| GGAATCAGAAATGAGAAAGT+AGG | - | chr3.2:78229938-78229957 | MS.gene057267:CDS | 35.0% | |
| TACAATGACGTGCTAATTAC+CGG | - | chr3.2:78227158-78227177 | MS.gene057267:intron | 35.0% | |
| TATCAGATTCAGTGTGATTG+TGG | + | chr3.2:78227089-78227108 | None:intergenic | 35.0% | |
| TCATGCTACTATGCTATTAG+GGG | - | chr3.2:78226686-78226705 | MS.gene057267:intron | 35.0% | |
| TGAGACTTTCAGAAAGCTTA+TGG | - | chr3.2:78229044-78229063 | MS.gene057267:intron | 35.0% | |
| TGGTTCAATAAATGCATAGC+AGG | - | chr3.2:78228611-78228630 | MS.gene057267:intron | 35.0% | |
| TTAATCACATTGTAGGTCAG+TGG | + | chr3.2:78226812-78226831 | None:intergenic | 35.0% | |
| TTCCACTTGCAACATATCTA+TGG | - | chr3.2:78228591-78228610 | MS.gene057267:intron | 35.0% | |
| TTTCAGACAGCGATTAAAAG+AGG | - | chr3.2:78228487-78228506 | MS.gene057267:CDS | 35.0% | |
| TTTCATAAGCTATCATGGAG+AGG | + | chr3.2:78229121-78229140 | None:intergenic | 35.0% | |
| ! | ATTGTTGCTCAAATTGGTTC+TGG | - | chr3.2:78226241-78226260 | MS.gene057267:CDS | 35.0% |
| ! | CAACCAATCTTTTTCCTTCT+GGG | + | chr3.2:78226092-78226111 | None:intergenic | 35.0% |
| ! | CCTGGAATATTGTTTTCCAT+TGG | - | chr3.2:78229917-78229936 | MS.gene057267:CDS | 35.0% |
| ! | CTATTTTGTAGTGAAACCCT+TGG | - | chr3.2:78228211-78228230 | MS.gene057267:intron | 35.0% |
| ! | CTGTCTGTTACTTATGTCAA+AGG | - | chr3.2:78228383-78228402 | MS.gene057267:CDS | 35.0% |
| ! | CTGTTACTTATGTCAAAGGA+GGG | - | chr3.2:78228387-78228406 | MS.gene057267:CDS | 35.0% |
| ! | CTTTTAATCGCTGTCTGAAA+TGG | + | chr3.2:78228487-78228506 | None:intergenic | 35.0% |
| ! | GAACTCTACTTCACAACTTT+TGG | - | chr3.2:78227134-78227153 | MS.gene057267:intron | 35.0% |
| ! | GATGTTTTCATAAGCTATCC+TGG | + | chr3.2:78229378-78229397 | None:intergenic | 35.0% |
| ! | TCTGTTACTTATGTCAAAGG+AGG | - | chr3.2:78228386-78228405 | MS.gene057267:CDS | 35.0% |
| ! | TGTTACTTATGTCAAAGGAG+GGG | - | chr3.2:78228388-78228407 | MS.gene057267:CDS | 35.0% |
| ! | TTTTTGTCATTGACAACAGC+AGG | + | chr3.2:78229785-78229804 | None:intergenic | 35.0% |
| !! | ACAATACCAGTTTTAGCAAC+TGG | + | chr3.2:78226226-78226245 | None:intergenic | 35.0% |
| !! | AGGTTTTGTGCTATTGTTCT+AGG | - | chr3.2:78229231-78229250 | MS.gene057267:intron | 35.0% |
| !! | GTTTAGCTCTTTGTTCCTTT+AGG | - | chr3.2:78227282-78227301 | MS.gene057267:intron | 35.0% |
| AAAACTTAACCCACTTGGGT+TGG | - | chr3.2:78229412-78229431 | MS.gene057267:CDS | 40.0% | |
| AAATGCTTGGCTTCTCTCTT+TGG | - | chr3.2:78227952-78227971 | MS.gene057267:intron | 40.0% | |
| AAGACTGTCATCCTACTCTT+TGG | - | chr3.2:78227477-78227496 | MS.gene057267:intron | 40.0% | |
| ACACACTTAAGGAGCTAAAG+TGG | + | chr3.2:78226325-78226344 | None:intergenic | 40.0% | |
| ACACTTAAGGAGCTAAAGTG+GGG | + | chr3.2:78226323-78226342 | None:intergenic | 40.0% | |
| ACACTTCACCAAGGTACAAA+GGG | + | chr3.2:78226038-78226057 | None:intergenic | 40.0% | |
| ACAGCTCAACACTATCACTT+AGG | + | chr3.2:78228699-78228718 | None:intergenic | 40.0% | |
| AGATTCAGTGTGATTGTGGA+AGG | + | chr3.2:78227085-78227104 | None:intergenic | 40.0% | |
| ATAAGCATCACACTTCACCA+AGG | + | chr3.2:78226047-78226066 | None:intergenic | 40.0% | |
| ATTGATGCTACGACATCTAC+TGG | - | chr3.2:78227620-78227639 | MS.gene057267:CDS | 40.0% | |
| CAAGTTTGTCAAGTTCACTG+CGG | + | chr3.2:78226186-78226205 | None:intergenic | 40.0% | |
| CAATGTTCATGAAGCCAAGA+AGG | - | chr3.2:78229853-78229872 | MS.gene057267:CDS | 40.0% | |
| CACAACCAAACACACACTTA+AGG | + | chr3.2:78226336-78226355 | None:intergenic | 40.0% | |
| CACACTTAAGGAGCTAAAGT+GGG | + | chr3.2:78226324-78226343 | None:intergenic | 40.0% | |
| CACTATTCTTATGGTCCTTG+AGG | - | chr3.2:78226538-78226557 | MS.gene057267:intron | 40.0% | |
| CCAGAAGGAAAAAGATTGGT+TGG | - | chr3.2:78226090-78226109 | MS.gene057267:CDS | 40.0% | |
| GACAGCGATTAAAAGAGGTA+TGG | - | chr3.2:78228492-78228511 | MS.gene057267:CDS | 40.0% | |
| GATGAGGAAGCTCTTTCAAT+TGG | - | chr3.2:78229998-78230017 | MS.gene057267:CDS | 40.0% | |
| GATTCATCAACACCCAGAAT+TGG | - | chr3.2:78226129-78226148 | MS.gene057267:CDS | 40.0% | |
| GCACATACTTGACTATGAAG+AGG | + | chr3.2:78227815-78227834 | None:intergenic | 40.0% | |
| GCTCATGCTACTATGCTATT+AGG | - | chr3.2:78226684-78226703 | MS.gene057267:intron | 40.0% | |
| GGCTACATCATTGGCAATAT+TGG | - | chr3.2:78227757-78227776 | MS.gene057267:intron | 40.0% | |
| GTTCTTGGAAAGCCAATTCT+GGG | + | chr3.2:78226144-78226163 | None:intergenic | 40.0% | |
| TAAGTAACAGACAGTACCTG+TGG | + | chr3.2:78228377-78228396 | None:intergenic | 40.0% | |
| TACATTAAGGAGCCAGACAA+CGG | - | chr3.2:78228451-78228470 | MS.gene057267:CDS | 40.0% | |
| TACCTGTGGCCAATATATGA+TGG | + | chr3.2:78228363-78228382 | None:intergenic | 40.0% | |
| TAGCTCCTTAAGTGTGTGTT+TGG | - | chr3.2:78226328-78226347 | MS.gene057267:CDS | 40.0% | |
| TAGTTCATTAGGGATGCTCA+GGG | + | chr3.2:78226929-78226948 | None:intergenic | 40.0% | |
| TCAGCGCAAAGATAAGCTTA+AGG | - | chr3.2:78226725-78226744 | MS.gene057267:intron | 40.0% | |
| TCATTGACAACAGCAGGATA+TGG | + | chr3.2:78229779-78229798 | None:intergenic | 40.0% | |
| TGTTCTTGGAAAGCCAATTC+TGG | + | chr3.2:78226145-78226164 | None:intergenic | 40.0% | |
| TTAGTTCATTAGGGATGCTC+AGG | + | chr3.2:78226930-78226949 | None:intergenic | 40.0% | |
| TTCACAGCAAGAACTATCCA+TGG | - | chr3.2:78227854-78227873 | MS.gene057267:intron | 40.0% | |
| TTGGCTTCATGAACATTGTC+TGG | + | chr3.2:78229851-78229870 | None:intergenic | 40.0% | |
| TTTCATAAGCTATCCTGGAG+AGG | + | chr3.2:78229373-78229392 | None:intergenic | 40.0% | |
| TTTGCAGGTTATTGAAGGAC+AGG | - | chr3.2:78229700-78229719 | MS.gene057267:intron | 40.0% | |
| ! | AAGTGATAGTGTTGAGCTGT+AGG | - | chr3.2:78228699-78228718 | MS.gene057267:intron | 40.0% |
| ! | ATTCTCACCGGTGTCAATTT+GGG | - | chr3.2:78229492-78229511 | MS.gene057267:intron | 40.0% |
| ! | CCAACCAATCTTTTTCCTTC+TGG | + | chr3.2:78226093-78226112 | None:intergenic | 40.0% |
| ! | CTATTGTTCTAGGCCTGTTT+GGG | - | chr3.2:78229241-78229260 | MS.gene057267:intron | 40.0% |
| ! | CTTTTCTTCTGTTGGTGTGT+TGG | - | chr3.2:78227400-78227419 | MS.gene057267:intron | 40.0% |
| ! | TTGTCTTTTGCTTAGTGGTG+TGG | - | chr3.2:78227347-78227366 | MS.gene057267:intron | 40.0% |
| !! | ACGTTGCTGTTTCTTACCAA+GGG | + | chr3.2:78228230-78228249 | None:intergenic | 40.0% |
| !! | TACGTTGCTGTTTCTTACCA+AGG | + | chr3.2:78228231-78228250 | None:intergenic | 40.0% |
| !! | TATCTGATCTTGGTGATGCT+TGG | - | chr3.2:78226594-78226613 | MS.gene057267:intron | 40.0% |
| !! | TGGTTAGGAACTTGTTGAGT+GGG | - | chr3.2:78226614-78226633 | MS.gene057267:intron | 40.0% |
| !! | TTGGTTAGGAACTTGTTGAG+TGG | - | chr3.2:78226613-78226632 | MS.gene057267:intron | 40.0% |
| AAAGTGGGGTAACCTGCAAA+GGG | + | chr3.2:78226309-78226328 | None:intergenic | 45.0% | |
| ACTGCAACAGCTTGTCTCAA+GGG | - | chr3.2:78227781-78227800 | MS.gene057267:intron | 45.0% | |
| ATCAGCACGAATAGCGATGA+TGG | + | chr3.2:78226275-78226294 | None:intergenic | 45.0% | |
| ATGCACTTCCCTTTGTACCT+TGG | - | chr3.2:78226027-78226046 | MS.gene057267:CDS | 45.0% | |
| ATGCATCCAGCAGCTGTAAA+AGG | + | chr3.2:78227668-78227687 | None:intergenic | 45.0% | |
| ATGCTTATTGTCACGAGACG+AGG | - | chr3.2:78228063-78228082 | MS.gene057267:intron | 45.0% | |
| CACACTTCACCAAGGTACAA+AGG | + | chr3.2:78226039-78226058 | None:intergenic | 45.0% | |
| CAGCCCAGAAGGAAAAAGAT+TGG | - | chr3.2:78226086-78226105 | MS.gene057267:CDS | 45.0% | |
| CAGGAAATCGCGTTCAAATG+CGG | + | chr3.2:78226852-78226871 | None:intergenic | 45.0% | |
| CATCTACATGTCGAGAGAGT+TGG | - | chr3.2:78229809-78229828 | MS.gene057267:CDS | 45.0% | |
| CGCAGTGAACTTGACAAACT+TGG | - | chr3.2:78226184-78226203 | MS.gene057267:CDS | 45.0% | |
| CGCGATTTCCTGCAATCTTA+AGG | - | chr3.2:78226860-78226879 | MS.gene057267:intron | 45.0% | |
| GACCATCATATATTGGCCAC+AGG | - | chr3.2:78228358-78228377 | MS.gene057267:CDS | 45.0% | |
| GAGAAACTTCCCCAAACTTG+TGG | - | chr3.2:78227901-78227920 | MS.gene057267:intron | 45.0% | |
| GATCTCAAGCCAATACCACT+AGG | + | chr3.2:78229438-78229457 | None:intergenic | 45.0% | |
| GCTAATGTCATAACCTCTCC+AGG | - | chr3.2:78229357-78229376 | MS.gene057267:CDS | 45.0% | |
| GTCAAGTTCACTGCGGATAA+GGG | + | chr3.2:78226179-78226198 | None:intergenic | 45.0% | |
| GTCGTGATCCTTAAGATTGC+AGG | + | chr3.2:78226871-78226890 | None:intergenic | 45.0% | |
| TAAAGTGGGGTAACCTGCAA+AGG | + | chr3.2:78226310-78226329 | None:intergenic | 45.0% | |
| TCAGCACGAATAGCGATGAT+GGG | + | chr3.2:78226274-78226293 | None:intergenic | 45.0% | |
| TGTCAAGTTCACTGCGGATA+AGG | + | chr3.2:78226180-78226199 | None:intergenic | 45.0% | |
| ! | ACTTCTTTTCCAACCTGCTG+AGG | - | chr3.2:78227523-78227542 | MS.gene057267:intron | 45.0% |
| ! | CATCGCTATTCGTGCTGATA+TGG | - | chr3.2:78226276-78226295 | MS.gene057267:CDS | 45.0% |
| ! | GAGGCAAAAATTGAAGGCGT+AGG | - | chr3.2:78227692-78227711 | MS.gene057267:intron | 45.0% |
| ! | GATTCTCACCGGTGTCAATT+TGG | - | chr3.2:78229491-78229510 | MS.gene057267:intron | 45.0% |
| ! | GCAAAAATTGAAGGCGTAGG+TGG | - | chr3.2:78227695-78227714 | MS.gene057267:intron | 45.0% |
| ! | GCTATTGTTCTAGGCCTGTT+TGG | - | chr3.2:78229240-78229259 | MS.gene057267:intron | 45.0% |
| ! | GCTCTAAGCTAAACCCAAAC+AGG | + | chr3.2:78229257-78229276 | None:intergenic | 45.0% |
| ! | TAGTGGATCTACAGTCTGGT+GGG | + | chr3.2:78227735-78227754 | None:intergenic | 45.0% |
| ! | TCCACTACTGGCTACATCAT+TGG | - | chr3.2:78227748-78227767 | MS.gene057267:intron | 45.0% |
| !! | AGTGGTATTGGCTTGAGATC+TGG | - | chr3.2:78229438-78229457 | MS.gene057267:intron | 45.0% |
| !! | GAGCTATAGCATCGATTCCA+GGG | - | chr3.2:78227642-78227661 | MS.gene057267:CDS | 45.0% |
| !! | GATCTTGGTGATGCTTGGTT+AGG | - | chr3.2:78226599-78226618 | MS.gene057267:intron | 45.0% |
| !! | TTGGCTTCTCTCTTTGGAAC+TGG | - | chr3.2:78227958-78227977 | MS.gene057267:intron | 45.0% |
| AACAGCAGGATATGGCGTGA+AGG | + | chr3.2:78229771-78229790 | None:intergenic | 50.0% | |
| AGCTGCTGGATGCATCTTTG+AGG | - | chr3.2:78227673-78227692 | MS.gene057267:intron | 50.0% | |
| AGTGGATCTACAGTCTGGTG+GGG | + | chr3.2:78227734-78227753 | None:intergenic | 50.0% | |
| CACTGCAACAGCTTGTCTCA+AGG | - | chr3.2:78227780-78227799 | MS.gene057267:intron | 50.0% | |
| CCAGACTGTAGATCCACTAC+TGG | - | chr3.2:78227736-78227755 | MS.gene057267:intron | 50.0% | |
| GAAATCGCGTTCAAATGCGG+CGG | + | chr3.2:78226849-78226868 | None:intergenic | 50.0% | |
| GATGGCAGAATGCATGCTTG+TGG | - | chr3.2:78226654-78226673 | MS.gene057267:intron | 50.0% | |
| GATTCTGAGTTCAGCCCAGA+AGG | - | chr3.2:78226075-78226094 | MS.gene057267:CDS | 50.0% | |
| GCCAATGATGTAGCCAGTAG+TGG | + | chr3.2:78227752-78227771 | None:intergenic | 50.0% | |
| GGGCACTTGTGTTGTGTTCT+TGG | + | chr3.2:78226159-78226178 | None:intergenic | 50.0% | |
| GGTACATGCTTTCCGTTGTC+TGG | + | chr3.2:78228466-78228485 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGATTCTCAC+CGG | - | chr3.2:78229480-78229499 | MS.gene057267:intron | 50.0% | |
| TAGCCCACCCAAATTGACAC+CGG | + | chr3.2:78229502-78229521 | None:intergenic | 50.0% | |
| TATGGATGCACTCCCTTTGC+AGG | - | chr3.2:78226294-78226313 | MS.gene057267:CDS | 50.0% | |
| TCATGAAGCCAAGAAGGCGA+TGG | - | chr3.2:78229859-78229878 | MS.gene057267:CDS | 50.0% | |
| TGTCTGGACCAAGCAGAAGT+CGG | + | chr3.2:78229835-78229854 | None:intergenic | 50.0% | |
| ! | CTTTTCCAACCTGCTGAGGA+GGG | - | chr3.2:78227527-78227546 | MS.gene057267:intron | 50.0% |
| ! | TCACCGGTGTCAATTTGGGT+GGG | - | chr3.2:78229496-78229515 | MS.gene057267:intron | 50.0% |
| ! | TCTTTTCCAACCTGCTGAGG+AGG | - | chr3.2:78227526-78227545 | MS.gene057267:intron | 50.0% |
| !! | CCAGTAGTGGATCTACAGTC+TGG | + | chr3.2:78227739-78227758 | None:intergenic | 50.0% |
| !! | GGAGCTATAGCATCGATTCC+AGG | - | chr3.2:78227641-78227660 | MS.gene057267:CDS | 50.0% |
| !! | GTAGTGGATCTACAGTCTGG+TGG | + | chr3.2:78227736-78227755 | None:intergenic | 50.0% |
| !! | TTGGGTTGGCCTAGTGGTAT+TGG | - | chr3.2:78229426-78229445 | MS.gene057267:CDS | 50.0% |
| ACCACTAGGCCAACCCAAGT+GGG | + | chr3.2:78229424-78229443 | None:intergenic | 55.0% | |
| GAAGCCAAGAAGGCGATGGT+AGG | - | chr3.2:78229863-78229882 | MS.gene057267:CDS | 55.0% | |
| GAATCGAACCTGAGACCTCG+AGG | + | chr3.2:78229476-78229495 | None:intergenic | 55.0% | |
| GTGGATCTACAGTCTGGTGG+GGG | + | chr3.2:78227733-78227752 | None:intergenic | 55.0% | |
| TACCACTAGGCCAACCCAAG+TGG | + | chr3.2:78229425-78229444 | None:intergenic | 55.0% | |
| TTCGCCTACCATCGCCTTCT+TGG | + | chr3.2:78229870-78229889 | None:intergenic | 55.0% | |
| ! | AGAGTTGGCCGACTTCTGCT+TGG | - | chr3.2:78229824-78229843 | MS.gene057267:CDS | 55.0% |
| ! | CTCACCGGTGTCAATTTGGG+TGG | - | chr3.2:78229495-78229514 | MS.gene057267:intron | 55.0% |
| CCAGCAGCTGTAAAAGGCCC+TGG | + | chr3.2:78227662-78227681 | None:intergenic | 60.0% | |
| GCGTTCAAATGCGGCGGATG+AGG | + | chr3.2:78226843-78226862 | None:intergenic | 60.0% | |
| TAGCTCCCTCCTCAGCAGGT+TGG | + | chr3.2:78227535-78227554 | None:intergenic | 60.0% | |
| TCGAACCTGAGACCTCGAGG+AGG | + | chr3.2:78229473-78229492 | None:intergenic | 60.0% | |
| ! | CCAGGGCCTTTTACAGCTGC+TGG | - | chr3.2:78227659-78227678 | MS.gene057267:CDS | 60.0% |
| ! | TGGAAGTGTGCTCCTCCTCG+AGG | - | chr3.2:78229458-78229477 | MS.gene057267:intron | 60.0% |
| !! | ACCCACTTGGGTTGGCCTAG+TGG | - | chr3.2:78229420-78229439 | MS.gene057267:CDS | 60.0% |
| CCTGCTGAGGAGGGAGCTAG+AGG | - | chr3.2:78227536-78227555 | MS.gene057267:intron | 65.0% | |
| GTGCTCCTCCTCGAGGTCTC+AGG | - | chr3.2:78229465-78229484 | MS.gene057267:intron | 65.0% | |
| ! | CCTCTAGCTCCCTCCTCAGC+AGG | + | chr3.2:78227539-78227558 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 78225992 | 78230075 | 78225992 | ID=MS.gene057267 |
| chr3.2 | mRNA | 78225992 | 78230075 | 78225992 | ID=MS.gene057267.t1;Parent=MS.gene057267 |
| chr3.2 | exon | 78229752 | 78230075 | 78229752 | ID=MS.gene057267.t1.exon1;Parent=MS.gene057267.t1 |
| chr3.2 | CDS | 78229752 | 78230075 | 78229752 | ID=cds.MS.gene057267.t1;Parent=MS.gene057267.t1 |
| chr3.2 | exon | 78229321 | 78229446 | 78229321 | ID=MS.gene057267.t1.exon2;Parent=MS.gene057267.t1 |
| chr3.2 | CDS | 78229321 | 78229446 | 78229321 | ID=cds.MS.gene057267.t1;Parent=MS.gene057267.t1 |
| chr3.2 | exon | 78228241 | 78228555 | 78228241 | ID=MS.gene057267.t1.exon3;Parent=MS.gene057267.t1 |
| chr3.2 | CDS | 78228241 | 78228555 | 78228241 | ID=cds.MS.gene057267.t1;Parent=MS.gene057267.t1 |
| chr3.2 | exon | 78227559 | 78227687 | 78227559 | ID=MS.gene057267.t1.exon4;Parent=MS.gene057267.t1 |
| chr3.2 | CDS | 78227559 | 78227687 | 78227559 | ID=cds.MS.gene057267.t1;Parent=MS.gene057267.t1 |
| chr3.2 | exon | 78225992 | 78226360 | 78225992 | ID=MS.gene057267.t1.exon5;Parent=MS.gene057267.t1 |
| chr3.2 | CDS | 78225992 | 78226360 | 78225992 | ID=cds.MS.gene057267.t1;Parent=MS.gene057267.t1 |
| Gene Sequence |
| Protein sequence |
