Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85178.t1 | XP_003597644.1 | 92.2 | 447 | 27 | 1 | 1 | 439 | 1 | 447 | 1.60E-232 | 815.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85178.t1 | O04373 | 66.2 | 426 | 142 | 2 | 1 | 424 | 1 | 426 | 1.0e-158 | 561.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85178.t1 | Q0GXX6 | 92.2 | 447 | 27 | 1 | 1 | 439 | 1 | 447 | 1.2e-232 | 815.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene85178 | MS.gene36383 | PPI |
| MS.gene85178 | MS.gene85177 | PPI |
| MS.gene85178 | MS.gene069897 | PPI |
| MS.gene76566 | MS.gene85178 | PPI |
| MS.gene85178 | MS.gene85176 | PPI |
| MS.gene013805 | MS.gene85178 | PPI |
| MS.gene85178 | MS.gene06588 | PPI |
| MS.gene85178 | MS.gene76562 | PPI |
| MS.gene85178 | MS.gene069896 | PPI |
| MS.gene85178 | MS.gene73784 | PPI |
| MS.gene02587 | MS.gene85178 | PPI |
| MS.gene85178 | MS.gene40923 | PPI |
| MS.gene045055 | MS.gene85178 | PPI |
| MS.gene85178 | MS.gene072157 | PPI |
| MS.gene76565 | MS.gene85178 | PPI |
| MS.gene85178 | MS.gene069898 | PPI |
| MS.gene057267 | MS.gene85178 | PPI |
| MS.gene013481 | MS.gene85178 | PPI |
| MS.gene85178 | MS.gene049260 | PPI |
| MS.gene85178 | MS.gene06367 | PPI |
| MS.gene85178 | MS.gene013282 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85178.t1 | MTR_2g100510 | 92.170 | 447 | 27 | 1 | 1 | 439 | 1 | 447 | 0.0 | 824 |
| MS.gene85178.t1 | MTR_2g100560 | 86.747 | 415 | 55 | 0 | 25 | 439 | 38 | 452 | 0.0 | 741 |
| MS.gene85178.t1 | MTR_2g097530 | 83.893 | 447 | 64 | 2 | 1 | 439 | 1 | 447 | 0.0 | 739 |
| MS.gene85178.t1 | MTR_2g097540 | 81.614 | 446 | 72 | 2 | 1 | 439 | 1 | 443 | 0.0 | 730 |
| MS.gene85178.t1 | MTR_2g100520 | 80.984 | 447 | 77 | 2 | 1 | 439 | 1 | 447 | 0.0 | 728 |
| MS.gene85178.t1 | MTR_8g015510 | 70.455 | 440 | 123 | 4 | 3 | 439 | 12 | 447 | 0.0 | 610 |
| MS.gene85178.t1 | MTR_8g015510 | 72.171 | 327 | 88 | 3 | 116 | 439 | 1 | 327 | 5.30e-161 | 457 |
| MS.gene85178.t1 | MTR_3g088590 | 55.928 | 388 | 171 | 0 | 34 | 421 | 85 | 472 | 1.29e-159 | 459 |
| MS.gene85178.t1 | MTR_8g062790 | 53.253 | 415 | 191 | 2 | 7 | 420 | 12 | 424 | 1.17e-153 | 442 |
| MS.gene85178.t1 | MTR_8g075310 | 52.826 | 407 | 174 | 4 | 11 | 417 | 25 | 413 | 2.59e-142 | 413 |
| MS.gene85178.t1 | MTR_3g093030 | 47.743 | 421 | 214 | 2 | 1 | 421 | 1 | 415 | 1.18e-136 | 399 |
| MS.gene85178.t1 | MTR_2g100550 | 85.185 | 162 | 14 | 2 | 1 | 155 | 1 | 159 | 1.29e-81 | 263 |
| MS.gene85178.t1 | MTR_8g063060 | 43.910 | 312 | 143 | 8 | 114 | 422 | 58 | 340 | 2.03e-70 | 228 |
| MS.gene85178.t1 | MTR_1g028070 | 69.298 | 114 | 35 | 0 | 147 | 260 | 14 | 127 | 8.83e-48 | 160 |
| MS.gene85178.t1 | MTR_3g077040 | 50.000 | 134 | 43 | 2 | 129 | 262 | 1 | 110 | 8.21e-32 | 117 |
| MS.gene85178.t1 | MTR_2g100530 | 76.786 | 56 | 13 | 0 | 384 | 439 | 14 | 69 | 4.55e-22 | 89.7 |
| MS.gene85178.t1 | MTR_1205s0010 | 31.548 | 168 | 109 | 3 | 243 | 409 | 1 | 163 | 1.40e-19 | 85.9 |
| MS.gene85178.t1 | MTR_3g093040 | 43.564 | 101 | 47 | 1 | 129 | 219 | 1 | 101 | 1.28e-17 | 83.6 |
| MS.gene85178.t1 | MTR_8g062090 | 50.877 | 114 | 18 | 3 | 155 | 262 | 29 | 110 | 4.01e-17 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85178.t1 | AT1G51760 | 70.188 | 426 | 125 | 2 | 1 | 424 | 1 | 426 | 0.0 | 617 |
| MS.gene85178.t1 | AT1G51780 | 65.566 | 424 | 144 | 2 | 1 | 422 | 1 | 424 | 0.0 | 552 |
| MS.gene85178.t1 | AT5G56660 | 62.821 | 390 | 142 | 2 | 32 | 421 | 37 | 423 | 0.0 | 515 |
| MS.gene85178.t1 | AT5G56650 | 62.564 | 390 | 143 | 2 | 32 | 421 | 36 | 422 | 1.73e-176 | 501 |
| MS.gene85178.t1 | AT1G44350 | 51.015 | 394 | 188 | 1 | 32 | 425 | 75 | 463 | 4.82e-135 | 396 |
| MS.gene85178.t1 | AT5G56650 | 67.254 | 284 | 90 | 2 | 24 | 306 | 27 | 308 | 7.21e-135 | 390 |
| MS.gene85178.t1 | AT3G02875 | 50.386 | 389 | 193 | 0 | 33 | 421 | 39 | 427 | 1.30e-134 | 394 |
| MS.gene85178.t1 | AT5G54140 | 49.604 | 379 | 190 | 1 | 44 | 421 | 39 | 417 | 5.23e-131 | 385 |
| MS.gene85178.t1 | AT3G02875 | 54.779 | 272 | 123 | 0 | 34 | 305 | 40 | 311 | 8.58e-103 | 309 |
| MS.gene85178.t1 | AT3G02875 | 56.637 | 226 | 98 | 0 | 37 | 262 | 43 | 268 | 1.95e-87 | 269 |
Find 106 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATGTCTCTGCCATATT+TGG | 0.135934 | 2.4:+3927916 | MS.gene85178:CDS |
| CACCTAAAGGTAAGTTATTT+AGG | 0.196492 | 2.4:-3927948 | None:intergenic |
| GCTCATGTTGCTATGCTTCT+TGG | 0.234508 | 2.4:+3926249 | MS.gene85178:CDS |
| CATGGATGCTCTTCTTATTC+AGG | 0.243047 | 2.4:+3925930 | MS.gene85178:CDS |
| TTCATGCATCATTAGCTTCT+AGG | 0.252610 | 2.4:+3929964 | MS.gene85178:CDS |
| CTCGGCGCTGATAAAGTTAA+AGG | 0.257371 | 2.4:+3929777 | MS.gene85178:CDS |
| ATCTTCGTTGACTTTGAAAT+AGG | 0.270714 | 2.4:-3929919 | None:intergenic |
| CTTTAGGTGAAGTGGCTTCT+AGG | 0.272403 | 2.4:+3927962 | MS.gene85178:CDS |
| TAAGCTTATAAGAACAAAAT+TGG | 0.272704 | 2.4:+3925810 | MS.gene85178:CDS |
| ACTGCAACTGGATGTTTATA+TGG | 0.283261 | 2.4:-3925847 | None:intergenic |
| GTTGCAGTGACAGGTGTTAT+TGG | 0.296181 | 2.4:+3925862 | MS.gene85178:CDS |
| CACGTTGGAAGTTGCCAATA+TGG | 0.302504 | 2.4:-3928076 | None:intergenic |
| TTGATTGGATGGTTGATATA+AGG | 0.308095 | 2.4:+3925737 | MS.gene85178:CDS |
| TTGGCTAAATCAAGAAACTT+TGG | 0.328046 | 2.4:-3925700 | None:intergenic |
| TGGCTAAATCAAGAAACTTT+GGG | 0.334139 | 2.4:-3925699 | None:intergenic |
| AGAACAAAATTGGATGAATT+AGG | 0.334989 | 2.4:+3925820 | MS.gene85178:CDS |
| CATCCATGGGTTTCTTCAAA+TGG | 0.336678 | 2.4:+3925605 | None:intergenic |
| AGGTCTGGTCCTATATTTGC+AGG | 0.344279 | 2.4:+3927982 | MS.gene85178:CDS |
| CCACCAATTGTGACAGAGTC+TGG | 0.344591 | 2.4:-3928610 | None:intergenic |
| TTCTATCAAGAGGCTATTCC+TGG | 0.354884 | 2.4:+3929834 | MS.gene85178:CDS |
| AATTCCTCATAACCAAGTTC+AGG | 0.364088 | 2.4:-3925778 | None:intergenic |
| CCACCACCTCCTTCTTCTGC+TGG | 0.366853 | 2.4:-3927862 | None:intergenic |
| TAGGACATGCAATCCAAATA+TGG | 0.370327 | 2.4:-3927929 | None:intergenic |
| TCTTCGTTGACTTTGAAATA+GGG | 0.375069 | 2.4:-3929918 | None:intergenic |
| GTCCTAAATAACTTACCTTT+AGG | 0.377975 | 2.4:+3927946 | MS.gene85178:CDS |
| ATAACACCTGTCACTGCAAC+TGG | 0.378254 | 2.4:-3925859 | None:intergenic |
| AAGCCATTTCCTGCAAATAT+AGG | 0.383047 | 2.4:-3927991 | None:intergenic |
| GGTGAAGTGGCTTCTAGGTC+TGG | 0.399799 | 2.4:+3927967 | MS.gene85178:CDS |
| GGAGCATGAAAAGCAGTTAC+AGG | 0.404702 | 2.4:+3926290 | MS.gene85178:CDS |
| GGTCCTATATTTGCAGGAAA+TGG | 0.407572 | 2.4:+3927988 | MS.gene85178:CDS |
| CCACCATTGTTTACTGTTGG+AGG | 0.418422 | 2.4:-3929717 | None:intergenic |
| TAAAGGCATGCAACCAATGA+TGG | 0.424511 | 2.4:+3929794 | MS.gene85178:CDS |
| TGGTGCTGCTAAGATCCTTA+AGG | 0.437128 | 2.4:+3926269 | MS.gene85178:CDS |
| ACGTTGGAAGTTGCCAATAT+GGG | 0.439285 | 2.4:-3928075 | None:intergenic |
| ACATTCTATAGACCCCATAT+TGG | 0.441418 | 2.4:+3928062 | MS.gene85178:CDS |
| ATCCATGGGTTTCTTCAAAT+GGG | 0.446535 | 2.4:+3925606 | None:intergenic |
| AAGTCTTCTGATCCCATCAT+TGG | 0.447557 | 2.4:-3929807 | None:intergenic |
| GATTGATCCCCTCGACTCTC+AGG | 0.448417 | 2.4:+3928131 | MS.gene85178:CDS |
| ATTCCAGACTCTGTCACAAT+TGG | 0.459091 | 2.4:+3928607 | MS.gene85178:CDS |
| ATCTTAGGAAATGGTGGAGT+CGG | 0.464166 | 2.4:+3926179 | MS.gene85178:intron |
| AGAAAGACTTCTCTTCTTCA+AGG | 0.468718 | 2.4:-3929692 | None:intergenic |
| ATCAGCGCCGAGCAAACTCC+CGG | 0.475703 | 2.4:-3929766 | None:intergenic |
| GTATCTGCTCAAATTGCATC+AGG | 0.476322 | 2.4:+3929986 | MS.gene85178:CDS |
| TTAAAGCAGTAATAAGCGGC+AGG | 0.482496 | 2.4:+3928016 | MS.gene85178:CDS |
| TCATTGATGTAGATTATCAC+TGG | 0.486477 | 2.4:+3929630 | MS.gene85178:intron |
| CCAGCAGAAGAAGGAGGTGG+TGG | 0.487742 | 2.4:+3927862 | MS.gene85178:CDS |
| GAATCCTGAACTTGGTTATG+AGG | 0.491210 | 2.4:+3925774 | MS.gene85178:CDS |
| AACGAAGATGCACTTCCTTA+CGG | 0.498146 | 2.4:+3929933 | MS.gene85178:CDS |
| AGTGTCGCCGGGAGTTTGCT+CGG | 0.501540 | 2.4:+3929759 | MS.gene85178:CDS |
| CTAGAAGCCACTTCACCTAA+AGG | 0.501909 | 2.4:-3927961 | None:intergenic |
| CTGCAACTGGATGTTTATAT+GGG | 0.502686 | 2.4:-3925846 | None:intergenic |
| TAACTTACCTTTAGGTGAAG+TGG | 0.503980 | 2.4:+3927954 | MS.gene85178:CDS |
| CCAGACTCTGTCACAATTGG+TGG | 0.504423 | 2.4:+3928610 | MS.gene85178:CDS |
| TTGACTGTAGCAATGATTCA+AGG | 0.505434 | 2.4:+3928565 | MS.gene85178:CDS |
| GTGGTCATTTGAAGTGGAAG+AGG | 0.507634 | 2.4:-3925668 | None:intergenic |
| CGATATTTCCCCACTACTAC+CGG | 0.511619 | 2.4:-3930014 | None:intergenic |
| GAAACTTTGGGATTGATAAG+TGG | 0.512167 | 2.4:-3925687 | None:intergenic |
| ATTCATGAGAATCCTGAACT+TGG | 0.516390 | 2.4:+3925766 | MS.gene85178:CDS |
| AAACATCCAGTTGCAGTGAC+AGG | 0.518282 | 2.4:+3925853 | MS.gene85178:CDS |
| CCGAGGAGGAATATGTATCC+AGG | 0.518763 | 2.4:-3929852 | None:intergenic |
| ACAGGTGTTATTGGTTACAT+AGG | 0.522130 | 2.4:+3925871 | MS.gene85178:CDS |
| TGATAAGTGGTCATTTGAAG+TGG | 0.531029 | 2.4:-3925674 | None:intergenic |
| GCATGAAGTGCAGCGCCGTA+AGG | 0.538872 | 2.4:-3929948 | None:intergenic |
| AAGCCACCATTGTTTACTGT+TGG | 0.541271 | 2.4:-3929720 | None:intergenic |
| CAAATTGCATCAGGAGGTAC+CGG | 0.542512 | 2.4:+3929995 | MS.gene85178:CDS |
| ATACATATTCCTCCTCGGAA+TGG | 0.552217 | 2.4:+3929857 | MS.gene85178:CDS |
| ACTGAGACACCGCATTGAGC+AGG | 0.554810 | 2.4:+3928669 | MS.gene85178:CDS |
| GATGTTTACCTGAGAGTCGA+GGG | 0.555879 | 2.4:-3928139 | None:intergenic |
| TCAGTTGAACATCTTCCGTC+GGG | 0.557198 | 2.4:+3929888 | MS.gene85178:CDS |
| ATTGGATGGTTGATATAAGG+AGG | 0.557920 | 2.4:+3925740 | MS.gene85178:CDS |
| AGACTTTGCATTCTATCAAG+AGG | 0.559534 | 2.4:+3929824 | MS.gene85178:CDS |
| CTCAGTTGAACATCTTCCGT+CGG | 0.561751 | 2.4:+3929887 | MS.gene85178:CDS |
| CAGGAGGTACCGGTAGTAGT+GGG | 0.563313 | 2.4:+3930005 | MS.gene85178:CDS |
| TGTAGCTCTCAGAGCTGACA+TGG | 0.570864 | 2.4:+3925912 | MS.gene85178:CDS |
| CAGCAGAAGAAGGAGGTGGT+GGG | 0.577188 | 2.4:+3927863 | MS.gene85178:CDS |
| CCTGGATACATATTCCTCCT+CGG | 0.577905 | 2.4:+3929852 | MS.gene85178:CDS |
| CAAGGAAGCTGACTGTTGCA+TGG | 0.578278 | 2.4:-3929674 | None:intergenic |
| AAAGGCATGCAACCAATGAT+GGG | 0.580422 | 2.4:+3929795 | MS.gene85178:CDS |
| TCAGCTCTGAGAGCTACAAA+AGG | 0.583224 | 2.4:-3925907 | None:intergenic |
| CAACCAGCAGAAGAAGGAGG+TGG | 0.586751 | 2.4:+3927859 | MS.gene85178:CDS |
| TCAGGAGGTACCGGTAGTAG+TGG | 0.592007 | 2.4:+3930004 | MS.gene85178:CDS |
| GCTCTGAGAGCTACAAAAGG+AGG | 0.595212 | 2.4:-3925904 | None:intergenic |
| TTCTTTAAAGCAGTAATAAG+CGG | 0.596096 | 2.4:+3928012 | MS.gene85178:CDS |
| AGCAGAAGAAGGAGGTGGTG+GGG | 0.597355 | 2.4:+3927864 | MS.gene85178:CDS |
| GAGCATAAGAGTAAAGTACC+TGG | 0.600076 | 2.4:+3926201 | MS.gene85178:CDS |
| TTTCCTCCAACAGTAAACAA+TGG | 0.607070 | 2.4:+3929714 | MS.gene85178:CDS |
| GACCCATTTGAAGAAACCCA+TGG | 0.609033 | 2.4:-3925608 | None:intergenic |
| GTAGCAATGATTCAAGGAGG+TGG | 0.610384 | 2.4:+3928571 | MS.gene85178:CDS |
| CGTTGGAAGTTGCCAATATG+GGG | 0.612774 | 2.4:-3928074 | None:intergenic |
| TAAAGCAGTAATAAGCGGCA+GGG | 0.613473 | 2.4:+3928017 | MS.gene85178:CDS |
| GCAGTAATAAGCGGCAGGGG+AGG | 0.613983 | 2.4:+3928021 | MS.gene85178:CDS |
| AGATGTTTACCTGAGAGTCG+AGG | 0.619358 | 2.4:-3928140 | None:intergenic |
| CCTCCAACAGTAAACAATGG+TGG | 0.623997 | 2.4:+3929717 | MS.gene85178:CDS |
| AAAGCAGTAATAAGCGGCAG+GGG | 0.627829 | 2.4:+3928018 | MS.gene85178:CDS |
| GTCTATAGAATGTTGAGGAA+TGG | 0.631178 | 2.4:-3928052 | None:intergenic |
| TTTCAACCAGCAGAAGAAGG+AGG | 0.636316 | 2.4:+3927856 | MS.gene85178:CDS |
| AAATAGGGTGAGTGTCCCGA+CGG | 0.639877 | 2.4:-3929903 | None:intergenic |
| ATGGGGTCTATAGAATGTTG+AGG | 0.640598 | 2.4:-3928057 | None:intergenic |
| CTGAGACATCTTCCATTCCG+AGG | 0.655881 | 2.4:-3929869 | None:intergenic |
| TTGTAAGCTAACAATCACGT+TGG | 0.658383 | 2.4:-3928091 | None:intergenic |
| AGGAGGTACCGGTAGTAGTG+GGG | 0.672269 | 2.4:+3930006 | MS.gene85178:CDS |
| TCTGCTCAAATTGCATCAGG+AGG | 0.685331 | 2.4:+3929989 | MS.gene85178:CDS |
| ATGTTTACCTGAGAGTCGAG+GGG | 0.714663 | 2.4:-3928138 | None:intergenic |
| AGACATCTTCCATTCCGAGG+AGG | 0.717446 | 2.4:-3929866 | None:intergenic |
| ACTGTAGCAATGATTCAAGG+AGG | 0.729288 | 2.4:+3928568 | MS.gene85178:CDS |
| CATAACAGACCTGCTCAATG+CGG | 0.730675 | 2.4:-3928678 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAACATATAAACAAAA+AGG | - | chr2.4:3929177-3929196 | None:intergenic | 10.0% |
| !! | AAAATTGTATAAGCTATAAA+CGG | - | chr2.4:3929470-3929489 | None:intergenic | 15.0% |
| !! | GAAAAGGAAAAAATAATAAT+AGG | - | chr2.4:3927749-3927768 | None:intergenic | 15.0% |
| !!! | AAAAAAAAAAGTATTGAACT+TGG | - | chr2.4:3926069-3926088 | None:intergenic | 15.0% |
| !!! | AGACATAGTTTTTTTTTAAA+AGG | - | chr2.4:3927601-3927620 | None:intergenic | 15.0% |
| !!! | AGTTCAATACTTTTTTTTTT+TGG | + | chr2.4:3926069-3926088 | MS.gene85178:intron | 15.0% |
| !!! | GTTTTTTTTTAAAAGGTATA+AGG | - | chr2.4:3927594-3927613 | None:intergenic | 15.0% |
| !!! | TTTTTTGGCAATTTTTTTTT+GGG | + | chr2.4:3926084-3926103 | MS.gene85178:intron | 15.0% |
| !!! | TTTTTTTGGCAATTTTTTTT+TGG | + | chr2.4:3926083-3926102 | MS.gene85178:intron | 15.0% |
| !! | AAAAATAAGGAATGATATCA+CGG | - | chr2.4:3927811-3927830 | None:intergenic | 20.0% |
| !! | AAATAAACACTTGTAAGATT+GGG | + | chr2.4:3927358-3927377 | MS.gene85178:intron | 20.0% |
| !! | AAGAACAAATAAAGTACAAA+TGG | + | chr2.4:3926952-3926971 | MS.gene85178:intron | 20.0% |
| !! | AAGGAAATGAAAAAAAAACT+TGG | + | chr2.4:3927688-3927707 | MS.gene85178:intron | 20.0% |
| !! | AGTTAATTAAAGTGACAAAA+AGG | - | chr2.4:3928327-3928346 | None:intergenic | 20.0% |
| !! | GATTTAGAAAATAAGAAAAG+AGG | - | chr2.4:3929309-3929328 | None:intergenic | 20.0% |
| !! | TAAATAAACACTTGTAAGAT+TGG | + | chr2.4:3927357-3927376 | MS.gene85178:intron | 20.0% |
| !! | TAAGCTTATAAGAACAAAAT+TGG | + | chr2.4:3925810-3925829 | MS.gene85178:CDS | 20.0% |
| !! | TAGCTTATATGAAAAAAGTT+TGG | + | chr2.4:3927471-3927490 | MS.gene85178:intron | 20.0% |
| !!! | ATAATTTGAAATGAAAACAC+AGG | - | chr2.4:3927211-3927230 | None:intergenic | 20.0% |
| !!! | ATTAAAAGCTTTGTTCTTTT+GGG | + | chr2.4:3928388-3928407 | MS.gene85178:intron | 20.0% |
| !!! | CTACATTTTTTTCTTCTTTA+AGG | + | chr2.4:3925954-3925973 | MS.gene85178:intron | 20.0% |
| !!! | TACTGCTTTTGAAATAAATA+TGG | + | chr2.4:3926760-3926779 | MS.gene85178:intron | 20.0% |
| !!! | TTTTTGTTGTTTTTGATCTT+AGG | + | chr2.4:3926164-3926183 | MS.gene85178:intron | 20.0% |
| !!! | TTTTTTCTTCTTTAAGGTTT+TGG | + | chr2.4:3925960-3925979 | MS.gene85178:intron | 20.0% |
| ! | AAAAAAGAGTAACTGAAAGT+AGG | - | chr2.4:3928269-3928288 | None:intergenic | 25.0% |
| ! | AAAAAGAGTAACTGAAAGTA+GGG | - | chr2.4:3928268-3928287 | None:intergenic | 25.0% |
| ! | AACATAAATAGTATCCTCAT+AGG | + | chr2.4:3928540-3928559 | MS.gene85178:intron | 25.0% |
| ! | AATAAATATGGAATGTGAAG+AGG | + | chr2.4:3926772-3926791 | MS.gene85178:intron | 25.0% |
| ! | AGAACAAAATTGGATGAATT+AGG | + | chr2.4:3925820-3925839 | MS.gene85178:CDS | 25.0% |
| ! | AGGAAAAAATAATAATAGGC+AGG | - | chr2.4:3927745-3927764 | None:intergenic | 25.0% |
| ! | ATGAGGATACTATTTATGTT+AGG | - | chr2.4:3928540-3928559 | None:intergenic | 25.0% |
| ! | ATTGTAACTGAGATGTTAAA+AGG | - | chr2.4:3927120-3927139 | None:intergenic | 25.0% |
| ! | CATACATTAAGTAGATGTTA+CGG | + | chr2.4:3928824-3928843 | MS.gene85178:intron | 25.0% |
| ! | TCAAGAAAGATTTAGAGATT+TGG | + | chr2.4:3926638-3926657 | MS.gene85178:intron | 25.0% |
| ! | TGAGATTGTAGATAATACAA+TGG | - | chr2.4:3927714-3927733 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr2.4:3926670-3926689 | MS.gene85178:intron | 25.0% |
| ! | TTAAGATATTTATCCAACCA+AGG | + | chr2.4:3929555-3929574 | MS.gene85178:intron | 25.0% |
| ! | TTTATGTTAGGAAACTATAG+AGG | - | chr2.4:3928528-3928547 | None:intergenic | 25.0% |
| !! | ATTGCAAACTAAGTTCTAAT+GGG | - | chr2.4:3928196-3928215 | None:intergenic | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | - | chr2.4:3926616-3926635 | None:intergenic | 25.0% |
| !! | TATGATCATGGATTTTATCT+GGG | + | chr2.4:3925991-3926010 | MS.gene85178:intron | 25.0% |
| !! | TTATGATCATGGATTTTATC+TGG | + | chr2.4:3925990-3926009 | MS.gene85178:intron | 25.0% |
| !! | TTTCCATCAACATAATTTGT+TGG | + | chr2.4:3929138-3929157 | MS.gene85178:intron | 25.0% |
| !! | TTTCCTTTTCTGAATTATCT+TGG | + | chr2.4:3927759-3927778 | MS.gene85178:intron | 25.0% |
| !! | TTTTGTTCTTATAAGCTTAC+TGG | - | chr2.4:3925809-3925828 | None:intergenic | 25.0% |
| !!! | ATGACCAAATTTTGGAATTT+GGG | + | chr2.4:3928914-3928933 | MS.gene85178:intron | 25.0% |
| !!! | CATTAAAAGCTTTGTTCTTT+TGG | + | chr2.4:3928387-3928406 | MS.gene85178:intron | 25.0% |
| !!! | CATTCCTTATTTTTGGTATA+GGG | + | chr2.4:3927817-3927836 | MS.gene85178:intron | 25.0% |
| !!! | GTGATATCATTCCTTATTTT+TGG | + | chr2.4:3927810-3927829 | MS.gene85178:intron | 25.0% |
| !!! | TCATTCCTTATTTTTGGTAT+AGG | + | chr2.4:3927816-3927835 | MS.gene85178:intron | 25.0% |
| !!! | TGCATTGATTACAGAAATTT+CGG | + | chr2.4:3929211-3929230 | MS.gene85178:intron | 25.0% |
| !!! | TTCCATCAACATAATTTGTT+GGG | + | chr2.4:3929139-3929158 | MS.gene85178:intron | 25.0% |
| !!! | TTCTTTAAAGCAGTAATAAG+CGG | + | chr2.4:3928012-3928031 | MS.gene85178:CDS | 25.0% |
| !!! | TTGGTTTTCAATTATGATCA+TGG | + | chr2.4:3925979-3925998 | MS.gene85178:intron | 25.0% |
| !!! | TTGTTTTTGATCTTAGGAAA+TGG | + | chr2.4:3926170-3926189 | MS.gene85178:intron | 25.0% |
| AAAAATGTTGAAAACCGTAC+TGG | + | chr2.4:3928465-3928484 | MS.gene85178:intron | 30.0% | |
| AAAAGAGTAACTGAAAGTAG+GGG | - | chr2.4:3928267-3928286 | None:intergenic | 30.0% | |
| AAGCAATTGTGAAACTGTTT+GGG | + | chr2.4:3929392-3929411 | MS.gene85178:intron | 30.0% | |
| AGCTTTCATTTGAAAAAGCT+CGG | - | chr2.4:3928642-3928661 | None:intergenic | 30.0% | |
| AGTTCCCTATACCAAAAATA+AGG | - | chr2.4:3927824-3927843 | None:intergenic | 30.0% | |
| ATCTATAGTAGAAAAGATGC+TGG | + | chr2.4:3926483-3926502 | MS.gene85178:intron | 30.0% | |
| ATTAGAAATGACAAGAGTTG+GGG | + | chr2.4:3926456-3926475 | MS.gene85178:intron | 30.0% | |
| CACCTAAAGGTAAGTTATTT+AGG | - | chr2.4:3927951-3927970 | None:intergenic | 30.0% | |
| CATGATCAAGAAGATTGAAA+AGG | + | chr2.4:3927669-3927688 | MS.gene85178:intron | 30.0% | |
| GATTAGAAATGACAAGAGTT+GGG | + | chr2.4:3926455-3926474 | MS.gene85178:intron | 30.0% | |
| GTCCTAAATAACTTACCTTT+AGG | + | chr2.4:3927946-3927965 | MS.gene85178:CDS | 30.0% | |
| GTTAATGTACTTGACATGAT+AGG | + | chr2.4:3926394-3926413 | MS.gene85178:intron | 30.0% | |
| TAAGCAATTGTGAAACTGTT+TGG | + | chr2.4:3929391-3929410 | MS.gene85178:intron | 30.0% | |
| TAGAGATTTGGATCGAAATA+TGG | + | chr2.4:3926650-3926669 | MS.gene85178:intron | 30.0% | |
| TCATTGATGTAGATTATCAC+TGG | + | chr2.4:3929630-3929649 | MS.gene85178:intron | 30.0% | |
| TCTACAAACATTACGATCTT+TGG | + | chr2.4:3927014-3927033 | MS.gene85178:intron | 30.0% | |
| TGAATATAATGGCTGTTTGA+GGG | + | chr2.4:3928439-3928458 | MS.gene85178:intron | 30.0% | |
| TGATTAGAAATGACAAGAGT+TGG | + | chr2.4:3926454-3926473 | MS.gene85178:intron | 30.0% | |
| TGGCTAAATCAAGAAACTTT+GGG | - | chr2.4:3925702-3925721 | None:intergenic | 30.0% | |
| TTGAATATGATGAAAACCTG+AGG | + | chr2.4:3928502-3928521 | MS.gene85178:intron | 30.0% | |
| TTGGCTAAATCAAGAAACTT+TGG | - | chr2.4:3925703-3925722 | None:intergenic | 30.0% | |
| TTTATCTGGGTTTGATGAAA+AGG | + | chr2.4:3926004-3926023 | MS.gene85178:intron | 30.0% | |
| ! | AATAAGTTGAAAACAGCTTG+CGG | - | chr2.4:3927413-3927432 | None:intergenic | 30.0% |
| ! | ACAACTTTTGAACACTACTT+AGG | + | chr2.4:3928982-3929001 | MS.gene85178:intron | 30.0% |
| ! | ACAATTTAAAACATTCCGGT+CGG | + | chr2.4:3927154-3927173 | MS.gene85178:intron | 30.0% |
| ! | ACAGAATTCATGTTTGACTT+TGG | - | chr2.4:3927235-3927254 | None:intergenic | 30.0% |
| ! | CATTGCAAACTAAGTTCTAA+TGG | - | chr2.4:3928197-3928216 | None:intergenic | 30.0% |
| ! | GACATGTAGATTTTGTAGTA+AGG | + | chr2.4:3926542-3926561 | MS.gene85178:intron | 30.0% |
| ! | GACCACAATTTAAAACATTC+CGG | + | chr2.4:3927150-3927169 | MS.gene85178:intron | 30.0% |
| ! | GATTTCACTTGATAGTATCA+GGG | + | chr2.4:3928869-3928888 | MS.gene85178:intron | 30.0% |
| ! | GCTAAGAAAATTTTAGATGC+TGG | + | chr2.4:3927886-3927905 | MS.gene85178:CDS | 30.0% |
| ! | TGATTTCACTTGATAGTATC+AGG | + | chr2.4:3928868-3928887 | MS.gene85178:intron | 30.0% |
| ! | TGTAGATTTTGTAGTAAGGA+AGG | + | chr2.4:3926546-3926565 | MS.gene85178:intron | 30.0% |
| ! | TTGATTGGATGGTTGATATA+AGG | + | chr2.4:3925737-3925756 | MS.gene85178:CDS | 30.0% |
| ! | TTTCGGGAACTAAATTCTTT+TGG | + | chr2.4:3929228-3929247 | MS.gene85178:intron | 30.0% |
| ! | TTTTTGATCTTAGGAAATGG+TGG | + | chr2.4:3926173-3926192 | MS.gene85178:intron | 30.0% |
| !! | ATCTTCGTTGACTTTGAAAT+AGG | - | chr2.4:3929922-3929941 | None:intergenic | 30.0% |
| !! | GCATTGATTACAGAAATTTC+GGG | + | chr2.4:3929212-3929231 | MS.gene85178:intron | 30.0% |
| !! | TCTTCGTTGACTTTGAAATA+GGG | - | chr2.4:3929921-3929940 | None:intergenic | 30.0% |
| !!! | CAAATTTTGGAATTTGGGTT+GGG | + | chr2.4:3928919-3928938 | MS.gene85178:intron | 30.0% |
| !!! | CATGACCAAATTTTGGAATT+TGG | + | chr2.4:3928913-3928932 | MS.gene85178:intron | 30.0% |
| AAACAAAAAGGCTTCGCAAA+GGG | - | chr2.4:3929165-3929184 | None:intergenic | 35.0% | |
| AAGCCATTTCCTGCAAATAT+AGG | - | chr2.4:3927994-3928013 | None:intergenic | 35.0% | |
| AATTCCTCATAACCAAGTTC+AGG | - | chr2.4:3925781-3925800 | None:intergenic | 35.0% | |
| AATTGTGAAACTGTTTGGGA+TGG | + | chr2.4:3929396-3929415 | MS.gene85178:intron | 35.0% | |
| ACATTCTATAGACCCCATAT+TGG | + | chr2.4:3928062-3928081 | MS.gene85178:CDS | 35.0% | |
| ACCATCCAATCAAAAACTTG+CGG | - | chr2.4:3925730-3925749 | None:intergenic | 35.0% | |
| ACTGCAACTGGATGTTTATA+TGG | - | chr2.4:3925850-3925869 | None:intergenic | 35.0% | |
| ACTTATCTGAGCTTATCTGT+TGG | + | chr2.4:3927331-3927350 | MS.gene85178:intron | 35.0% | |
| AGAAAGACTTCTCTTCTTCA+AGG | - | chr2.4:3929695-3929714 | None:intergenic | 35.0% | |
| AGACTTTGCATTCTATCAAG+AGG | + | chr2.4:3929824-3929843 | MS.gene85178:CDS | 35.0% | |
| AGGCCAAGATAATTCAGAAA+AGG | - | chr2.4:3927765-3927784 | None:intergenic | 35.0% | |
| AGTAAGGAAGGTAGATCAAA+TGG | + | chr2.4:3926558-3926577 | MS.gene85178:intron | 35.0% | |
| ATGAAAAGCAGTTACAGGTA+TGG | + | chr2.4:3926295-3926314 | MS.gene85178:intron | 35.0% | |
| ATTCATGAGAATCCTGAACT+TGG | + | chr2.4:3925766-3925785 | MS.gene85178:CDS | 35.0% | |
| CACTGTCTTGCTGAATATAA+TGG | + | chr2.4:3928428-3928447 | MS.gene85178:intron | 35.0% | |
| CATCAAAGGACAAAAACAGA+AGG | - | chr2.4:3927785-3927804 | None:intergenic | 35.0% | |
| CATTACGATCTTTGGTGAAT+TGG | + | chr2.4:3927022-3927041 | MS.gene85178:intron | 35.0% | |
| CCAACCCAAATTCCAAAATT+TGG | - | chr2.4:3928921-3928940 | None:intergenic | 35.0% | |
| CTGAATATAATGGCTGTTTG+AGG | + | chr2.4:3928438-3928457 | MS.gene85178:intron | 35.0% | |
| CTGCAACTGGATGTTTATAT+GGG | - | chr2.4:3925849-3925868 | None:intergenic | 35.0% | |
| CTGCAATTTATCTGCATGAT+TGG | - | chr2.4:3926993-3927012 | None:intergenic | 35.0% | |
| CTGTTTACATAAGCTATCCT+GGG | - | chr2.4:3927447-3927466 | None:intergenic | 35.0% | |
| GAAAATGTCTCTGCCATATT+TGG | + | chr2.4:3927916-3927935 | MS.gene85178:CDS | 35.0% | |
| GCAAATAGACGCATAAACTT+TGG | + | chr2.4:3929254-3929273 | MS.gene85178:intron | 35.0% | |
| GCATAATGAGCCTCAAAATT+TGG | - | chr2.4:3927288-3927307 | None:intergenic | 35.0% | |
| GGAAAATCGTAGAATGAATC+TGG | + | chr2.4:3927051-3927070 | MS.gene85178:intron | 35.0% | |
| GTCATATCTCTAGACAATGT+GGG | + | chr2.4:3929004-3929023 | MS.gene85178:intron | 35.0% | |
| GTCTATAGAATGTTGAGGAA+TGG | - | chr2.4:3928055-3928074 | None:intergenic | 35.0% | |
| TAAACAAAAAGGCTTCGCAA+AGG | - | chr2.4:3929166-3929185 | None:intergenic | 35.0% | |
| TAACTTACCTTTAGGTGAAG+TGG | + | chr2.4:3927954-3927973 | MS.gene85178:CDS | 35.0% | |
| TAGGACATGCAATCCAAATA+TGG | - | chr2.4:3927932-3927951 | None:intergenic | 35.0% | |
| TCAGATAAGTCAATCTAAGC+AGG | - | chr2.4:3927321-3927340 | None:intergenic | 35.0% | |
| TCTGTTTACATAAGCTATCC+TGG | - | chr2.4:3927448-3927467 | None:intergenic | 35.0% | |
| TCTTTGGTGAATTGGTATAG+TGG | + | chr2.4:3927030-3927049 | MS.gene85178:intron | 35.0% | |
| TGATAAGTGGTCATTTGAAG+TGG | - | chr2.4:3925677-3925696 | None:intergenic | 35.0% | |
| TGTTTACATAAGCTATCCTG+GGG | - | chr2.4:3927446-3927465 | None:intergenic | 35.0% | |
| TTGACTGTAGCAATGATTCA+AGG | + | chr2.4:3928565-3928584 | MS.gene85178:CDS | 35.0% | |
| TTGTAAGCTAACAATCACGT+TGG | - | chr2.4:3928094-3928113 | None:intergenic | 35.0% | |
| TTTCCTCCAACAGTAAACAA+TGG | + | chr2.4:3929714-3929733 | MS.gene85178:CDS | 35.0% | |
| ! | AACTGTTTTCCTCAAACCAA+AGG | - | chr2.4:3926833-3926852 | None:intergenic | 35.0% |
| ! | ATAATTTTGCAGTGCCAGTA+CGG | - | chr2.4:3928482-3928501 | None:intergenic | 35.0% |
| ! | ATTGGATGGTTGATATAAGG+AGG | + | chr2.4:3925740-3925759 | MS.gene85178:CDS | 35.0% |
| ! | CAAACTGATGCCAAATTTTG+AGG | + | chr2.4:3927275-3927294 | MS.gene85178:intron | 35.0% |
| ! | CACTTTGCATGACCAAATTT+TGG | + | chr2.4:3928906-3928925 | MS.gene85178:intron | 35.0% |
| ! | GGTTGTGTTGTATTTCTACA+AGG | + | chr2.4:3926105-3926124 | MS.gene85178:intron | 35.0% |
| ! | GTTGTATTTCTACAAGGATG+AGG | + | chr2.4:3926111-3926130 | MS.gene85178:intron | 35.0% |
| ! | TACTTTTGTCTCTTAGAGTC+TGG | + | chr2.4:3929335-3929354 | MS.gene85178:intron | 35.0% |
| ! | TATGGCAGAGACATTTTCTA+AGG | - | chr2.4:3927914-3927933 | None:intergenic | 35.0% |
| ! | TTCATGCATCATTAGCTTCT+AGG | + | chr2.4:3929964-3929983 | MS.gene85178:CDS | 35.0% |
| !! | AAAAGGTATAAGGCCTTGTT+TGG | - | chr2.4:3927584-3927603 | None:intergenic | 35.0% |
| !! | ACAGGTGTTATTGGTTACAT+AGG | + | chr2.4:3925871-3925890 | MS.gene85178:CDS | 35.0% |
| !! | GAAACTTTGGGATTGATAAG+TGG | - | chr2.4:3925690-3925709 | None:intergenic | 35.0% |
| !! | GACCGGAATGTTTTAAATTG+TGG | - | chr2.4:3927155-3927174 | None:intergenic | 35.0% |
| !!! | CCAAATTTTGGAATTTGGGT+TGG | + | chr2.4:3928918-3928937 | MS.gene85178:intron | 35.0% |
| !!! | CTTCTGTTTTTGTCCTTTGA+TGG | + | chr2.4:3927783-3927802 | MS.gene85178:intron | 35.0% |
| AAAGCAGGCTTAGGTGATTT+GGG | + | chr2.4:3926506-3926525 | MS.gene85178:intron | 40.0% | |
| AACGAAGATGCACTTCCTTA+CGG | + | chr2.4:3929933-3929952 | MS.gene85178:CDS | 40.0% | |
| AAGAATCTGAGTGGTTGCTT+TGG | - | chr2.4:3928239-3928258 | None:intergenic | 40.0% | |
| AAGCCACCATTGTTTACTGT+TGG | - | chr2.4:3929723-3929742 | None:intergenic | 40.0% | |
| AAGGAAGGTAGATCAAATGG+AGG | + | chr2.4:3926561-3926580 | MS.gene85178:intron | 40.0% | |
| AAGTCTTCTGATCCCATCAT+TGG | - | chr2.4:3929810-3929829 | None:intergenic | 40.0% | |
| AATCCCTAACCGACTAATTG+TGG | - | chr2.4:3929099-3929118 | None:intergenic | 40.0% | |
| ACATGCATGACCTTTGATAG+AGG | + | chr2.4:3926803-3926822 | MS.gene85178:intron | 40.0% | |
| ACGAAACCAGTTTGTAAGGA+AGG | + | chr2.4:3928956-3928975 | MS.gene85178:intron | 40.0% | |
| ACGTTGGAAGTTGCCAATAT+GGG | - | chr2.4:3928078-3928097 | None:intergenic | 40.0% | |
| ACTGTAGCAATGATTCAAGG+AGG | + | chr2.4:3928568-3928587 | MS.gene85178:CDS | 40.0% | |
| AGGCTCATTATGCCAACTTT+GGG | + | chr2.4:3927295-3927314 | MS.gene85178:intron | 40.0% | |
| AGTCATATCACTAGAGACAG+AGG | + | chr2.4:3926586-3926605 | MS.gene85178:intron | 40.0% | |
| ATAAACTTTGGCCAGGGAAA+TGG | + | chr2.4:3929266-3929285 | MS.gene85178:intron | 40.0% | |
| ATACATATTCCTCCTCGGAA+TGG | + | chr2.4:3929857-3929876 | MS.gene85178:CDS | 40.0% | |
| ATCAAAAACTTGCGGCTCTT+TGG | - | chr2.4:3925722-3925741 | None:intergenic | 40.0% | |
| ATGGGGTCTATAGAATGTTG+AGG | - | chr2.4:3928060-3928079 | None:intergenic | 40.0% | |
| ATTCCAGACTCTGTCACAAT+TGG | + | chr2.4:3928607-3928626 | MS.gene85178:CDS | 40.0% | |
| CAAAGGCAAACCTCTATCAA+AGG | - | chr2.4:3926816-3926835 | None:intergenic | 40.0% | |
| CATGGATGCTCTTCTTATTC+AGG | + | chr2.4:3925930-3925949 | MS.gene85178:CDS | 40.0% | |
| CTTTGATAGAGGTTTGCCTT+TGG | + | chr2.4:3926814-3926833 | MS.gene85178:intron | 40.0% | |
| GAATCCTGAACTTGGTTATG+AGG | + | chr2.4:3925774-3925793 | MS.gene85178:CDS | 40.0% | |
| GACATGATAGGATGTTGTCT+TGG | + | chr2.4:3926406-3926425 | MS.gene85178:intron | 40.0% | |
| GCTGTTTATCGATCCAAACA+AGG | + | chr2.4:3927568-3927587 | MS.gene85178:intron | 40.0% | |
| GGCCCAACAAATTATGTTGA+TGG | - | chr2.4:3929144-3929163 | None:intergenic | 40.0% | |
| GGTCATATCTCTAGACAATG+TGG | + | chr2.4:3929003-3929022 | MS.gene85178:intron | 40.0% | |
| GGTCCTATATTTGCAGGAAA+TGG | + | chr2.4:3927988-3928007 | MS.gene85178:CDS | 40.0% | |
| GTATCTGCTCAAATTGCATC+AGG | + | chr2.4:3929986-3930005 | MS.gene85178:CDS | 40.0% | |
| GTTGTCTTCATTGCATTCTC+CGG | - | chr2.4:3929069-3929088 | None:intergenic | 40.0% | |
| TAAACTTTGGCCAGGGAAAT+GGG | + | chr2.4:3929267-3929286 | MS.gene85178:intron | 40.0% | |
| TAAAGCAGTAATAAGCGGCA+GGG | + | chr2.4:3928017-3928036 | MS.gene85178:CDS | 40.0% | |
| TAGAAAAGATGCTGGAAAGC+AGG | + | chr2.4:3926491-3926510 | MS.gene85178:intron | 40.0% | |
| TCATTTGTGTTGGGTGTGAA+GGG | - | chr2.4:3929041-3929060 | None:intergenic | 40.0% | |
| TGATATCACGGATCCATCAA+AGG | - | chr2.4:3927799-3927818 | None:intergenic | 40.0% | |
| TGCTACAGTCAAAACCTATG+AGG | - | chr2.4:3928557-3928576 | None:intergenic | 40.0% | |
| TGGAAATCCCGTCATAATTG+CGG | - | chr2.4:3929124-3929143 | None:intergenic | 40.0% | |
| TTAAAGCAGTAATAAGCGGC+AGG | + | chr2.4:3928016-3928035 | MS.gene85178:CDS | 40.0% | |
| TTCACACCCAACACAAATGA+AGG | + | chr2.4:3929041-3929060 | MS.gene85178:intron | 40.0% | |
| TTCATTTGTGTTGGGTGTGA+AGG | - | chr2.4:3929042-3929061 | None:intergenic | 40.0% | |
| TTCTATCAAGAGGCTATTCC+TGG | + | chr2.4:3929834-3929853 | MS.gene85178:CDS | 40.0% | |
| ! | AAAGGCATGCAACCAATGAT+GGG | + | chr2.4:3929795-3929814 | MS.gene85178:CDS | 40.0% |
| ! | AAGAGCCGCAAGTTTTTGAT+TGG | + | chr2.4:3925722-3925741 | MS.gene85178:CDS | 40.0% |
| ! | ACTAAGTTCTAATGGGTGGT+TGG | - | chr2.4:3928189-3928208 | None:intergenic | 40.0% |
| ! | ACTATAAGAAGAGCACACCT+TGG | - | chr2.4:3929575-3929594 | None:intergenic | 40.0% |
| ! | ATCTTAGGAAATGGTGGAGT+CGG | + | chr2.4:3926179-3926198 | MS.gene85178:intron | 40.0% |
| ! | CCTTACAAACTGGTTTCGTA+GGG | - | chr2.4:3928955-3928974 | None:intergenic | 40.0% |
| ! | GAGCATAAGAGTAAAGTACC+TGG | + | chr2.4:3926201-3926220 | MS.gene85178:CDS | 40.0% |
| ! | GCAAACTAAGTTCTAATGGG+TGG | - | chr2.4:3928193-3928212 | None:intergenic | 40.0% |
| ! | TAAAGGCATGCAACCAATGA+TGG | + | chr2.4:3929794-3929813 | MS.gene85178:CDS | 40.0% |
| ! | TCCTTACAAACTGGTTTCGT+AGG | - | chr2.4:3928956-3928975 | None:intergenic | 40.0% |
| ! | TTCTAATGGGTGGTTGGAAA+GGG | - | chr2.4:3928183-3928202 | None:intergenic | 40.0% |
| ! | TTTAAAACATTCCGGTCGGA+CGG | + | chr2.4:3927158-3927177 | MS.gene85178:intron | 40.0% |
| !! | ACTGCTTTTCATGCTCCTTA+AGG | - | chr2.4:3926287-3926306 | None:intergenic | 40.0% |
| !! | CTTATTTCTATAAGCTCCCC+AGG | + | chr2.4:3927427-3927446 | MS.gene85178:intron | 40.0% |
| !! | GTTTTTCAACCAGCAGAAGA+AGG | + | chr2.4:3927853-3927872 | MS.gene85178:CDS | 40.0% |
| !! | TGTAAGATTGGGAGTGCTTA+TGG | + | chr2.4:3927369-3927388 | MS.gene85178:intron | 40.0% |
| !!! | ACTATTTTCAAAGTGTCGCC+GGG | + | chr2.4:3929748-3929767 | MS.gene85178:CDS | 40.0% |
| !!! | GACTATTTTCAAAGTGTCGC+CGG | + | chr2.4:3929747-3929766 | MS.gene85178:CDS | 40.0% |
| AAACATCCAGTTGCAGTGAC+AGG | + | chr2.4:3925853-3925872 | MS.gene85178:CDS | 45.0% | |
| AAACTTTGGCCAGGGAAATG+GGG | + | chr2.4:3929268-3929287 | MS.gene85178:intron | 45.0% | |
| AAAGCAGTAATAAGCGGCAG+GGG | + | chr2.4:3928018-3928037 | MS.gene85178:CDS | 45.0% | |
| AACCGACTAATTGTGGCAGT+TGG | - | chr2.4:3929092-3929111 | None:intergenic | 45.0% | |
| AATCTAAGCAGGCCCAAAGT+TGG | - | chr2.4:3927310-3927329 | None:intergenic | 45.0% | |
| AATCTGGCTGATGTGCAGTT+GGG | + | chr2.4:3927067-3927086 | MS.gene85178:intron | 45.0% | |
| ACCCAACTGCCACAATTAGT+CGG | + | chr2.4:3929087-3929106 | MS.gene85178:intron | 45.0% | |
| ACCGACTAATTGTGGCAGTT+GGG | - | chr2.4:3929091-3929110 | None:intergenic | 45.0% | |
| ACTGCCACAATTAGTCGGTT+AGG | + | chr2.4:3929092-3929111 | MS.gene85178:intron | 45.0% | |
| AGAATTTGACCCCATTTCCC+TGG | - | chr2.4:3929280-3929299 | None:intergenic | 45.0% | |
| AGACGCATAAACTTTGGCCA+GGG | + | chr2.4:3929260-3929279 | MS.gene85178:intron | 45.0% | |
| AGATGTTTACCTGAGAGTCG+AGG | - | chr2.4:3928143-3928162 | None:intergenic | 45.0% | |
| AGGATGTTGTCTTGGATGTG+TGG | + | chr2.4:3926414-3926433 | MS.gene85178:intron | 45.0% | |
| AGGTCTGGTCCTATATTTGC+AGG | + | chr2.4:3927982-3928001 | MS.gene85178:CDS | 45.0% | |
| ATAACACCTGTCACTGCAAC+TGG | - | chr2.4:3925862-3925881 | None:intergenic | 45.0% | |
| ATGTTTACCTGAGAGTCGAG+GGG | - | chr2.4:3928141-3928160 | None:intergenic | 45.0% | |
| CACGTTGGAAGTTGCCAATA+TGG | - | chr2.4:3928079-3928098 | None:intergenic | 45.0% | |
| CATAACAGACCTGCTCAATG+CGG | - | chr2.4:3928681-3928700 | None:intergenic | 45.0% | |
| CCACCATTGTTTACTGTTGG+AGG | - | chr2.4:3929720-3929739 | None:intergenic | 45.0% | |
| CCCTACGAAACCAGTTTGTA+AGG | + | chr2.4:3928952-3928971 | MS.gene85178:intron | 45.0% | |
| CCTCCAACAGTAAACAATGG+TGG | + | chr2.4:3929717-3929736 | MS.gene85178:CDS | 45.0% | |
| CCTGGAAAAATGCATGCATG+TGG | + | chr2.4:3926219-3926238 | MS.gene85178:CDS | 45.0% | |
| CCTGGATACATATTCCTCCT+CGG | + | chr2.4:3929852-3929871 | MS.gene85178:CDS | 45.0% | |
| CGATATTTCCCCACTACTAC+CGG | - | chr2.4:3930017-3930036 | None:intergenic | 45.0% | |
| CGTTGGAAGTTGCCAATATG+GGG | - | chr2.4:3928077-3928096 | None:intergenic | 45.0% | |
| CTAGAAGCCACTTCACCTAA+AGG | - | chr2.4:3927964-3927983 | None:intergenic | 45.0% | |
| CTCAGTTGAACATCTTCCGT+CGG | + | chr2.4:3929887-3929906 | MS.gene85178:CDS | 45.0% | |
| CTGCCACAATTAGTCGGTTA+GGG | + | chr2.4:3929093-3929112 | MS.gene85178:intron | 45.0% | |
| CTTTAGGTGAAGTGGCTTCT+AGG | + | chr2.4:3927962-3927981 | MS.gene85178:CDS | 45.0% | |
| GAAAGCAGGCTTAGGTGATT+TGG | + | chr2.4:3926505-3926524 | MS.gene85178:intron | 45.0% | |
| GAGGCTCATTATGCCAACTT+TGG | + | chr2.4:3927294-3927313 | MS.gene85178:intron | 45.0% | |
| GATGTGTGGTAAGACTAGAC+GGG | + | chr2.4:3926428-3926447 | MS.gene85178:intron | 45.0% | |
| GATGTTTACCTGAGAGTCGA+GGG | - | chr2.4:3928142-3928161 | None:intergenic | 45.0% | |
| GCTCATGTTGCTATGCTTCT+TGG | + | chr2.4:3926249-3926268 | MS.gene85178:CDS | 45.0% | |
| GGAGCATGAAAAGCAGTTAC+AGG | + | chr2.4:3926290-3926309 | MS.gene85178:CDS | 45.0% | |
| GGATGTGTGGTAAGACTAGA+CGG | + | chr2.4:3926427-3926446 | MS.gene85178:intron | 45.0% | |
| GGATTGACCGCAATTATGAC+GGG | + | chr2.4:3929114-3929133 | MS.gene85178:intron | 45.0% | |
| GGGATTGACCGCAATTATGA+CGG | + | chr2.4:3929113-3929132 | MS.gene85178:intron | 45.0% | |
| GGGGAATTCAAGAATCTGAG+TGG | - | chr2.4:3928248-3928267 | None:intergenic | 45.0% | |
| GTAGCAATGATTCAAGGAGG+TGG | + | chr2.4:3928571-3928590 | MS.gene85178:CDS | 45.0% | |
| TAGACGCATAAACTTTGGCC+AGG | + | chr2.4:3929259-3929278 | MS.gene85178:intron | 45.0% | |
| TAGGAAACTATAGAGGCCTC+AGG | - | chr2.4:3928521-3928540 | None:intergenic | 45.0% | |
| TCAGTTGAACATCTTCCGTC+GGG | + | chr2.4:3929888-3929907 | MS.gene85178:CDS | 45.0% | |
| TCTGCTCAAATTGCATCAGG+AGG | + | chr2.4:3929989-3930008 | MS.gene85178:CDS | 45.0% | |
| TGTGCACCTTCCTTACAAAC+TGG | - | chr2.4:3928965-3928984 | None:intergenic | 45.0% | |
| TTTCAACCAGCAGAAGAAGG+AGG | + | chr2.4:3927856-3927875 | MS.gene85178:CDS | 45.0% | |
| ! | CAAATTGCATCAGGAGGTAC+CGG | + | chr2.4:3929995-3930014 | MS.gene85178:CDS | 45.0% |
| ! | CAGTTGGGTTGCTATAGTTG+CGG | + | chr2.4:3927082-3927101 | MS.gene85178:intron | 45.0% |
| ! | CCACATGCATGCATTTTTCC+AGG | - | chr2.4:3926222-3926241 | None:intergenic | 45.0% |
| ! | GTGGTCATTTGAAGTGGAAG+AGG | - | chr2.4:3925671-3925690 | None:intergenic | 45.0% |
| ! | GTTCTAATGGGTGGTTGGAA+AGG | - | chr2.4:3928184-3928203 | None:intergenic | 45.0% |
| ! | GTTGCAGTGACAGGTGTTAT+TGG | + | chr2.4:3925862-3925881 | MS.gene85178:CDS | 45.0% |
| ! | TAAGAAGAGCACACCTTGGT+TGG | - | chr2.4:3929571-3929590 | None:intergenic | 45.0% |
| !! | AGAGGTTTGCCTTTGGTTTG+AGG | + | chr2.4:3926821-3926840 | MS.gene85178:intron | 45.0% |
| !! | CTCGGCGCTGATAAAGTTAA+AGG | + | chr2.4:3929777-3929796 | MS.gene85178:CDS | 45.0% |
| !! | GCCGCAAGTTTTTGATTGGA+TGG | + | chr2.4:3925726-3925745 | MS.gene85178:CDS | 45.0% |
| !! | TCAGCTCTGAGAGCTACAAA+AGG | - | chr2.4:3925910-3925929 | None:intergenic | 45.0% |
| !! | TGGTGCTGCTAAGATCCTTA+AGG | + | chr2.4:3926269-3926288 | MS.gene85178:CDS | 45.0% |
| !!! | CTTTTGGGACTTCTGCTTAG+TGG | + | chr2.4:3928403-3928422 | MS.gene85178:intron | 45.0% |
| AAAGTGCATAACCGTCCGAC+CGG | - | chr2.4:3927172-3927191 | None:intergenic | 50.0% | |
| AAATAGGGTGAGTGTCCCGA+CGG | - | chr2.4:3929906-3929925 | None:intergenic | 50.0% | |
| AGACATCTTCCATTCCGAGG+AGG | - | chr2.4:3929869-3929888 | None:intergenic | 50.0% | |
| AGATGCTGGAAAGCAGGCTT+AGG | + | chr2.4:3926497-3926516 | MS.gene85178:intron | 50.0% | |
| CAAGGAAGCTGACTGTTGCA+TGG | - | chr2.4:3929677-3929696 | None:intergenic | 50.0% | |
| CCACCAATTGTGACAGAGTC+TGG | - | chr2.4:3928613-3928632 | None:intergenic | 50.0% | |
| CCAGACTCTGTCACAATTGG+TGG | + | chr2.4:3928610-3928629 | MS.gene85178:CDS | 50.0% | |
| CCGAGGAGGAATATGTATCC+AGG | - | chr2.4:3929855-3929874 | None:intergenic | 50.0% | |
| CCGGCACCTTCATTTGTGTT+GGG | - | chr2.4:3929050-3929069 | None:intergenic | 50.0% | |
| CTGAGACATCTTCCATTCCG+AGG | - | chr2.4:3929872-3929891 | None:intergenic | 50.0% | |
| GAATCTGGCTGATGTGCAGT+TGG | + | chr2.4:3927066-3927085 | MS.gene85178:intron | 50.0% | |
| TCCGGCACCTTCATTTGTGT+TGG | - | chr2.4:3929051-3929070 | None:intergenic | 50.0% | |
| TGACTCCAGCTAGTGGGATA+GGG | + | chr2.4:3926713-3926732 | MS.gene85178:intron | 50.0% | |
| TGTAGCTCTCAGAGCTGACA+TGG | + | chr2.4:3925912-3925931 | MS.gene85178:CDS | 50.0% | |
| TTGTGTTGGGTGTGAAGGGT+TGG | - | chr2.4:3929037-3929056 | None:intergenic | 50.0% | |
| ! | ATGTAGCTGACTCCAGCTAG+TGG | + | chr2.4:3926706-3926725 | MS.gene85178:intron | 50.0% |
| ! | CCCAACACAAATGAAGGTGC+CGG | + | chr2.4:3929047-3929066 | MS.gene85178:intron | 50.0% |
| ! | GTCGGACGGTTATGCACTTT+TGG | + | chr2.4:3927172-3927191 | MS.gene85178:intron | 50.0% |
| ! | TGTAGCTGACTCCAGCTAGT+GGG | + | chr2.4:3926707-3926726 | MS.gene85178:intron | 50.0% |
| !! | GCTCTGAGAGCTACAAAAGG+AGG | - | chr2.4:3925907-3925926 | None:intergenic | 50.0% |
| ACTGAGACACCGCATTGAGC+AGG | + | chr2.4:3928669-3928688 | MS.gene85178:CDS | 55.0% | |
| AGCAGAAGAAGGAGGTGGTG+GGG | + | chr2.4:3927864-3927883 | MS.gene85178:CDS | 55.0% | |
| CAACCAGCAGAAGAAGGAGG+TGG | + | chr2.4:3927859-3927878 | MS.gene85178:CDS | 55.0% | |
| CAGCAGAAGAAGGAGGTGGT+GGG | + | chr2.4:3927863-3927882 | MS.gene85178:CDS | 55.0% | |
| CTGACTCCAGCTAGTGGGAT+AGG | + | chr2.4:3926712-3926731 | MS.gene85178:intron | 55.0% | |
| GATTGATCCCCTCGACTCTC+AGG | + | chr2.4:3928131-3928150 | MS.gene85178:CDS | 55.0% | |
| GGTGAAGTGGCTTCTAGGTC+TGG | + | chr2.4:3927967-3927986 | MS.gene85178:CDS | 55.0% | |
| !! | AGGAGGTACCGGTAGTAGTG+GGG | + | chr2.4:3930006-3930025 | MS.gene85178:CDS | 55.0% |
| !! | CAGGAGGTACCGGTAGTAGT+GGG | + | chr2.4:3930005-3930024 | MS.gene85178:CDS | 55.0% |
| !! | TCAGGAGGTACCGGTAGTAG+TGG | + | chr2.4:3930004-3930023 | MS.gene85178:CDS | 55.0% |
| CCAAGCCCTATCCCACTAGC+TGG | - | chr2.4:3926721-3926740 | None:intergenic | 60.0% | |
| CCACCACCTCCTTCTTCTGC+TGG | - | chr2.4:3927865-3927884 | None:intergenic | 60.0% | |
| CCAGCAGAAGAAGGAGGTGG+TGG | + | chr2.4:3927862-3927881 | MS.gene85178:CDS | 60.0% | |
| CCAGCTAGTGGGATAGGGCT+TGG | + | chr2.4:3926718-3926737 | MS.gene85178:intron | 60.0% | |
| GCAGTAATAAGCGGCAGGGG+AGG | + | chr2.4:3928021-3928040 | MS.gene85178:CDS | 60.0% | |
| GCATGAAGTGCAGCGCCGTA+AGG | - | chr2.4:3929951-3929970 | None:intergenic | 60.0% | |
| ! | AGTGTCGCCGGGAGTTTGCT+CGG | + | chr2.4:3929759-3929778 | MS.gene85178:CDS | 60.0% |
| ! | ATCAGCGCCGAGCAAACTCC+CGG | - | chr2.4:3929769-3929788 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 3925610 | 3930049 | 3925610 | ID=MS.gene85178 |
| chr2.4 | mRNA | 3925610 | 3930049 | 3925610 | ID=MS.gene85178.t1;Parent=MS.gene85178 |
| chr2.4 | exon | 3925610 | 3925951 | 3925610 | ID=MS.gene85178.t1.exon1;Parent=MS.gene85178.t1 |
| chr2.4 | CDS | 3925610 | 3925951 | 3925610 | ID=cds.MS.gene85178.t1;Parent=MS.gene85178.t1 |
| chr2.4 | exon | 3926186 | 3926311 | 3926186 | ID=MS.gene85178.t1.exon2;Parent=MS.gene85178.t1 |
| chr2.4 | CDS | 3926186 | 3926311 | 3926186 | ID=cds.MS.gene85178.t1;Parent=MS.gene85178.t1 |
| chr2.4 | exon | 3927838 | 3928152 | 3927838 | ID=MS.gene85178.t1.exon3;Parent=MS.gene85178.t1 |
| chr2.4 | CDS | 3927838 | 3928152 | 3927838 | ID=cds.MS.gene85178.t1;Parent=MS.gene85178.t1 |
| chr2.4 | exon | 3928562 | 3928690 | 3928562 | ID=MS.gene85178.t1.exon4;Parent=MS.gene85178.t1 |
| chr2.4 | CDS | 3928562 | 3928690 | 3928562 | ID=cds.MS.gene85178.t1;Parent=MS.gene85178.t1 |
| chr2.4 | exon | 3929642 | 3930049 | 3929642 | ID=MS.gene85178.t1.exon5;Parent=MS.gene85178.t1 |
| chr2.4 | CDS | 3929642 | 3930049 | 3929642 | ID=cds.MS.gene85178.t1;Parent=MS.gene85178.t1 |
| Gene Sequence |
| Protein sequence |
