Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06588.t1 | XP_003602410.1 | 97.1 | 420 | 12 | 0 | 1 | 420 | 1 | 420 | 2.40E-233 | 817.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06588.t1 | Q7XUA8 | 63.4 | 382 | 139 | 1 | 38 | 419 | 35 | 415 | 9.7e-143 | 508.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06588.t1 | Q0GXX5 | 97.1 | 420 | 12 | 0 | 1 | 420 | 1 | 420 | 1.7e-233 | 817.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057267 | MS.gene06588 | 0.950671 | 1.02E-108 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene85176 | MS.gene06588 | PPI |
| MS.gene76566 | MS.gene06588 | PPI |
| MS.gene013805 | MS.gene06588 | PPI |
| MS.gene069898 | MS.gene06588 | PPI |
| MS.gene85178 | MS.gene06588 | PPI |
| MS.gene76562 | MS.gene06588 | PPI |
| MS.gene045055 | MS.gene06588 | PPI |
| MS.gene73784 | MS.gene06588 | PPI |
| MS.gene02587 | MS.gene06588 | PPI |
| MS.gene76565 | MS.gene06588 | PPI |
| MS.gene072157 | MS.gene06588 | PPI |
| MS.gene85177 | MS.gene06588 | PPI |
| MS.gene069896 | MS.gene06588 | PPI |
| MS.gene36383 | MS.gene06588 | PPI |
| MS.gene06588 | MS.gene069897 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06588.t1 | MTR_3g093030 | 97.143 | 420 | 12 | 0 | 1 | 420 | 1 | 420 | 0.0 | 848 |
| MS.gene06588.t1 | MTR_3g088590 | 52.580 | 407 | 187 | 2 | 18 | 418 | 69 | 475 | 2.24e-147 | 427 |
| MS.gene06588.t1 | MTR_2g100560 | 52.196 | 387 | 183 | 2 | 30 | 415 | 49 | 434 | 3.60e-144 | 418 |
| MS.gene06588.t1 | MTR_8g062790 | 49.289 | 422 | 203 | 4 | 7 | 420 | 12 | 430 | 1.24e-142 | 414 |
| MS.gene06588.t1 | MTR_2g100510 | 51.554 | 386 | 187 | 0 | 30 | 415 | 44 | 429 | 4.11e-141 | 410 |
| MS.gene06588.t1 | MTR_8g015510 | 49.644 | 421 | 205 | 4 | 5 | 418 | 11 | 431 | 2.45e-140 | 408 |
| MS.gene06588.t1 | MTR_2g097530 | 50.518 | 386 | 191 | 0 | 30 | 415 | 44 | 429 | 3.40e-140 | 408 |
| MS.gene06588.t1 | MTR_2g097540 | 47.962 | 417 | 214 | 1 | 4 | 417 | 11 | 427 | 8.74e-140 | 407 |
| MS.gene06588.t1 | MTR_2g100520 | 46.172 | 418 | 217 | 2 | 6 | 415 | 12 | 429 | 1.60e-135 | 396 |
| MS.gene06588.t1 | MTR_8g075310 | 49.215 | 382 | 177 | 2 | 30 | 411 | 49 | 413 | 8.24e-132 | 386 |
| MS.gene06588.t1 | MTR_8g015510 | 50.804 | 311 | 151 | 2 | 110 | 418 | 1 | 311 | 2.35e-101 | 305 |
| MS.gene06588.t1 | MTR_8g063060 | 41.748 | 309 | 148 | 7 | 108 | 413 | 58 | 337 | 1.86e-65 | 214 |
| MS.gene06588.t1 | MTR_3g093040 | 81.818 | 99 | 8 | 1 | 123 | 211 | 1 | 99 | 5.05e-46 | 161 |
| MS.gene06588.t1 | MTR_2g100550 | 58.120 | 117 | 49 | 0 | 38 | 154 | 48 | 164 | 1.72e-43 | 160 |
| MS.gene06588.t1 | MTR_1g028070 | 45.614 | 114 | 62 | 0 | 141 | 254 | 14 | 127 | 3.01e-26 | 102 |
| MS.gene06588.t1 | MTR_3g077040 | 35.821 | 134 | 62 | 2 | 123 | 256 | 1 | 110 | 3.40e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06588.t1 | AT5G54140 | 58.173 | 416 | 171 | 2 | 4 | 418 | 7 | 420 | 3.78e-173 | 491 |
| MS.gene06588.t1 | AT3G02875 | 50.251 | 398 | 196 | 1 | 23 | 418 | 33 | 430 | 2.50e-146 | 424 |
| MS.gene06588.t1 | AT1G51760 | 49.279 | 416 | 207 | 2 | 6 | 417 | 10 | 425 | 3.14e-144 | 418 |
| MS.gene06588.t1 | AT1G51780 | 49.282 | 418 | 208 | 2 | 6 | 419 | 10 | 427 | 3.24e-142 | 413 |
| MS.gene06588.t1 | AT5G56660 | 52.105 | 380 | 179 | 2 | 38 | 417 | 49 | 425 | 2.13e-137 | 400 |
| MS.gene06588.t1 | AT5G56650 | 50.000 | 380 | 187 | 2 | 38 | 417 | 48 | 424 | 9.81e-130 | 381 |
| MS.gene06588.t1 | AT1G44350 | 51.500 | 400 | 187 | 2 | 20 | 417 | 67 | 461 | 6.46e-128 | 377 |
| MS.gene06588.t1 | AT3G02875 | 53.405 | 279 | 128 | 1 | 23 | 299 | 33 | 311 | 6.25e-105 | 314 |
| MS.gene06588.t1 | AT5G56650 | 55.513 | 263 | 115 | 1 | 38 | 300 | 48 | 308 | 6.94e-101 | 303 |
| MS.gene06588.t1 | AT3G02875 | 54.661 | 236 | 105 | 1 | 23 | 256 | 33 | 268 | 1.32e-88 | 271 |
Find 82 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCTTGGAAAGCCAATTC+TGG | 0.188078 | 3.3:+77640144 | None:intergenic |
| ATCCCATCATATGTAAAATT+TGG | 0.213215 | 3.3:-77637862 | MS.gene06588:CDS |
| GGCTACATCATTGGCAATAT+TGG | 0.222385 | 3.3:-77638530 | MS.gene06588:CDS |
| GCTCATGCTACTATGCTATT+AGG | 0.227578 | 3.3:-77639603 | MS.gene06588:CDS |
| TTCGCCTACCATCGCCTTCT+TGG | 0.228788 | 3.3:+77636420 | None:intergenic |
| ACTGGTATTGTTGCTCAAAT+TGG | 0.240045 | 3.3:-77640051 | MS.gene06588:CDS |
| CTCATGCTACTATGCTATTA+GGG | 0.260514 | 3.3:-77639602 | MS.gene06588:CDS |
| CATCGCTATTCGTGCTGATA+TGG | 0.271047 | 3.3:-77640010 | MS.gene06588:CDS |
| GGGCACTTGTGTTGTGTTCT+TGG | 0.285265 | 3.3:+77640130 | None:intergenic |
| TATGGATGCACTCCCTTTGC+AGG | 0.301563 | 3.3:-77639992 | MS.gene06588:intron |
| TTGGCTTCATGAACATTGTC+TGG | 0.313081 | 3.3:+77636439 | None:intergenic |
| ATGCATCCAGCAGCTGTAAA+AGG | 0.313338 | 3.3:+77638622 | None:intergenic |
| TTAGCAACTGGATATGTATA+AGG | 0.319340 | 3.3:+77640075 | None:intergenic |
| ATTGTTGCTCAAATTGGTTC+TGG | 0.333604 | 3.3:-77640045 | MS.gene06588:CDS |
| TCATTGACAACAGCAGGATA+TGG | 0.358726 | 3.3:+77636511 | None:intergenic |
| GGTACATGCTTTCCGTTGTC+TGG | 0.362605 | 3.3:+77637824 | None:intergenic |
| GATGAGGAAGCTCTTTCAAT+TGG | 0.378444 | 3.3:-77636289 | MS.gene06588:CDS |
| GATTCATCAACACCCAGAAT+TGG | 0.394773 | 3.3:-77640157 | MS.gene06588:CDS |
| GGAGCTATAGCATCGATTCC+AGG | 0.399066 | 3.3:-77638646 | MS.gene06588:CDS |
| CCAATGGAAAACAATATTCC+AGG | 0.411904 | 3.3:+77636370 | None:intergenic |
| ACATATCCAGTTGCTAAAAC+TGG | 0.412373 | 3.3:-77640069 | MS.gene06588:CDS |
| TGTCAAGTTCACTGCGGATA+AGG | 0.413444 | 3.3:+77640109 | None:intergenic |
| GTTCTTGGAAAGCCAATTCT+GGG | 0.436845 | 3.3:+77640145 | None:intergenic |
| TCCACTACTGGCTACATCAT+TGG | 0.441186 | 3.3:-77638539 | MS.gene06588:CDS |
| CCTCTAGCTCCCTCCTCAGC+AGG | 0.446876 | 3.3:+77638751 | None:intergenic |
| CGCAGTGAACTTGACAAACT+TGG | 0.449993 | 3.3:-77640102 | MS.gene06588:CDS |
| ATGCACTTCCCTTTGTACCT+TGG | 0.451159 | 3.3:-77640259 | MS.gene06588:CDS |
| ATCAGCACGAATAGCGATGA+TGG | 0.452920 | 3.3:+77640014 | None:intergenic |
| TTTGCAGGTTATTGAAGGAC+AGG | 0.461465 | 3.3:-77636587 | MS.gene06588:intron |
| TTTCTCATTTCTGATTCCAA+TGG | 0.462714 | 3.3:+77636354 | None:intergenic |
| GTCAAGTTCACTGCGGATAA+GGG | 0.470836 | 3.3:+77640110 | None:intergenic |
| TAATATTTGCAGGTTATTGA+AGG | 0.475540 | 3.3:-77636592 | MS.gene06588:intron |
| ATTGATGCTACGACATCTAC+TGG | 0.492280 | 3.3:-77638667 | MS.gene06588:CDS |
| AGAGTTGGCCGACTTCTGCT+TGG | 0.497776 | 3.3:-77636463 | MS.gene06588:CDS |
| TTTCAGACAGCGATTAAAAG+AGG | 0.503463 | 3.3:-77637800 | MS.gene06588:intron |
| TCAGCGCAAAGATAAGCTTA+AGG | 0.505619 | 3.3:-77639562 | MS.gene06588:intron |
| CACTGCAACAGCTTGTCTCA+AGG | 0.507821 | 3.3:-77638507 | MS.gene06588:CDS |
| CCAGCAGCTGTAAAAGGCCC+TGG | 0.508450 | 3.3:+77638628 | None:intergenic |
| AAACACAATAAGTACATGAA+TGG | 0.518642 | 3.3:+77640287 | None:intergenic |
| TGGTTAGGAACTTGTTGAGT+GGG | 0.518955 | 3.3:-77639673 | MS.gene06588:intron |
| CCATCATATGTAAAATTTGG+AGG | 0.522089 | 3.3:-77637859 | MS.gene06588:CDS |
| GATTCTGAGTTCAGCCCAGA+AGG | 0.530256 | 3.3:-77640211 | MS.gene06588:CDS |
| CATCTACATGTCGAGAGAGT+TGG | 0.530513 | 3.3:-77636478 | MS.gene06588:CDS |
| GGAATCAGAAATGAGAAAGT+AGG | 0.531619 | 3.3:-77636349 | MS.gene06588:CDS |
| GCCTCACAAATGATAAAAGA+AGG | 0.534222 | 3.3:-77638727 | MS.gene06588:CDS |
| GAATACAAGAGCAAAATTGA+TGG | 0.536081 | 3.3:-77639651 | MS.gene06588:CDS |
| GTAGTGGATCTACAGTCTGG+TGG | 0.536999 | 3.3:+77638554 | None:intergenic |
| ACACTTCACCAAGGTACAAA+GGG | 0.537229 | 3.3:+77640251 | None:intergenic |
| CCAGTAGTGGATCTACAGTC+TGG | 0.538838 | 3.3:+77638551 | None:intergenic |
| AGCTGCTGGATGCATCTTTG+AGG | 0.539162 | 3.3:-77638614 | MS.gene06588:CDS |
| TAAAATTTGGAGGTACACTA+AGG | 0.539172 | 3.3:-77637849 | MS.gene06588:CDS |
| CAATGTTCATGAAGCCAAGA+AGG | 0.540814 | 3.3:-77636434 | MS.gene06588:CDS |
| ACTGCAACAGCTTGTCTCAA+GGG | 0.552626 | 3.3:-77638506 | MS.gene06588:CDS |
| TAAAGTGGGGTAACCTGCAA+AGG | 0.552801 | 3.3:+77639979 | None:intergenic |
| GCCAATGATGTAGCCAGTAG+TGG | 0.554312 | 3.3:+77638538 | None:intergenic |
| ATATGTTGATTTCAAAGAAG+AGG | 0.556877 | 3.3:-77636542 | MS.gene06588:CDS |
| TAGTGGATCTACAGTCTGGT+GGG | 0.558827 | 3.3:+77638555 | None:intergenic |
| CACACTTCACCAAGGTACAA+AGG | 0.561395 | 3.3:+77640250 | None:intergenic |
| GAGCTATAGCATCGATTCCA+GGG | 0.569617 | 3.3:-77638645 | MS.gene06588:CDS |
| CCAGACTGTAGATCCACTAC+TGG | 0.574441 | 3.3:-77638551 | MS.gene06588:CDS |
| TAGCTCCCTCCTCAGCAGGT+TGG | 0.580361 | 3.3:+77638755 | None:intergenic |
| GTGGATCTACAGTCTGGTGG+GGG | 0.591638 | 3.3:+77638557 | None:intergenic |
| CCTGCTGAGGAGGGAGCTAG+AGG | 0.592496 | 3.3:-77638751 | MS.gene06588:CDS |
| CTGTCTGTTACTTATGTCAA+AGG | 0.595485 | 3.3:-77637904 | MS.gene06588:CDS |
| CAACATATGCATTACATCTG+TGG | 0.596314 | 3.3:+77636557 | None:intergenic |
| AGTGGATCTACAGTCTGGTG+GGG | 0.597884 | 3.3:+77638556 | None:intergenic |
| CTGTTACTTATGTCAAAGGA+GGG | 0.601374 | 3.3:-77637900 | MS.gene06588:CDS |
| AAAGTGGGGTAACCTGCAAA+GGG | 0.604350 | 3.3:+77639980 | None:intergenic |
| GAAGCCAAGAAGGCGATGGT+AGG | 0.605651 | 3.3:-77636424 | MS.gene06588:CDS |
| GCACATACTTGACTATGAAG+AGG | 0.609774 | 3.3:+77638475 | None:intergenic |
| TCAGCACGAATAGCGATGAT+GGG | 0.611137 | 3.3:+77640015 | None:intergenic |
| TCTGTTACTTATGTCAAAGG+AGG | 0.632862 | 3.3:-77637901 | MS.gene06588:CDS |
| TACACTAAGGAGCCAGACAA+CGG | 0.634401 | 3.3:-77637836 | MS.gene06588:CDS |
| AACAGCAGGATATGGCGTGA+AGG | 0.641655 | 3.3:+77636519 | None:intergenic |
| TGTCTGGACCAAGCAGAAGT+CGG | 0.643080 | 3.3:+77636455 | None:intergenic |
| TGTTACTTATGTCAAAGGAG+GGG | 0.643945 | 3.3:-77637899 | MS.gene06588:CDS |
| TCATGAAGCCAAGAAGGCGA+TGG | 0.652120 | 3.3:-77636428 | MS.gene06588:CDS |
| GATGGCAGAATGCATGCTTG+TGG | 0.663638 | 3.3:-77639633 | MS.gene06588:CDS |
| TCATGCTACTATGCTATTAG+GGG | 0.665400 | 3.3:-77639601 | MS.gene06588:CDS |
| TTGGTTAGGAACTTGTTGAG+TGG | 0.677704 | 3.3:-77639674 | MS.gene06588:intron |
| ATAAGCATCACACTTCACCA+AGG | 0.746407 | 3.3:+77640242 | None:intergenic |
| CAAGTTTGTCAAGTTCACTG+CGG | 0.769058 | 3.3:+77640103 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCATTTATATAAGCTTA+GGG | - | chr3.3:77638512-77638531 | MS.gene06588:CDS | 15.0% |
| !! | TATTTCATTTATATAAGCTT+AGG | - | chr3.3:77638511-77638530 | MS.gene06588:CDS | 15.0% |
| !!! | AGAATATTGTTTTTCAAATA+AGG | - | chr3.3:77636802-77636821 | MS.gene06588:intron | 15.0% |
| !!! | TATTATTTTTTATCTGATGT+TGG | - | chr3.3:77636825-77636844 | MS.gene06588:intron | 15.0% |
| !! | AAAACCTAGAAAAGATAAAT+GGG | + | chr3.3:77639203-77639222 | None:intergenic | 20.0% |
| !! | AAAACCTAGAAAAGATTAAT+GGG | + | chr3.3:77639459-77639478 | None:intergenic | 20.0% |
| !! | AAATGAATTGTGAAATAGTT+TGG | - | chr3.3:77637231-77637250 | MS.gene06588:intron | 20.0% |
| !! | ACTCTTTGGTATTAATTAAA+GGG | - | chr3.3:77637732-77637751 | MS.gene06588:intron | 20.0% |
| !! | ATAAATGATGATATCTAAAC+TGG | + | chr3.3:77638765-77638784 | None:intergenic | 20.0% |
| !! | ATAAGCTAAACAAGATTTAT+AGG | + | chr3.3:77639907-77639926 | None:intergenic | 20.0% |
| !! | TAAAACCTAGAAAAGATAAA+TGG | + | chr3.3:77639204-77639223 | None:intergenic | 20.0% |
| !! | TACTCTTTGGTATTAATTAA+AGG | - | chr3.3:77637731-77637750 | MS.gene06588:intron | 20.0% |
| !! | TATTGATAGATAATATTTGC+AGG | - | chr3.3:77639926-77639945 | MS.gene06588:intron | 20.0% |
| !! | TCACCTTAATTTCAAATTAA+GGG | + | chr3.3:77639050-77639069 | None:intergenic | 20.0% |
| !! | TTCACCTTAATTTCAAATTA+AGG | + | chr3.3:77639051-77639070 | None:intergenic | 20.0% |
| !! | TTTAATTAATACCAAAGAGT+AGG | + | chr3.3:77637732-77637751 | None:intergenic | 20.0% |
| !!! | AACATTAGGTTTATACATTT+TGG | + | chr3.3:77637506-77637525 | None:intergenic | 20.0% |
| !!! | GTTGATTTATTTTATCCTAA+AGG | + | chr3.3:77637541-77637560 | None:intergenic | 20.0% |
| !!! | TAAACTTTTATTCAAATGCT+TGG | - | chr3.3:77638180-77638199 | MS.gene06588:intron | 20.0% |
| !!! | TGAGTTGAACAATAAATTTA+AGG | - | chr3.3:77636679-77636698 | MS.gene06588:intron | 20.0% |
| ! | AAACACAATAAGTACATGAA+TGG | + | chr3.3:77636244-77636263 | None:intergenic | 25.0% |
| ! | AATCAAATTCTAGCATACAA+GGG | + | chr3.3:77638403-77638422 | None:intergenic | 25.0% |
| ! | ATATAAAAACTTAACCCACT+TGG | - | chr3.3:77639648-77639667 | MS.gene06588:CDS | 25.0% |
| ! | ATCCCATCATATGTAAAATT+TGG | - | chr3.3:77638666-77638685 | MS.gene06588:CDS | 25.0% |
| ! | CAAAACCTAGAAAAGATTAA+TGG | + | chr3.3:77639460-77639479 | None:intergenic | 25.0% |
| ! | CAAATATTTACAAGGATTTG+AGG | + | chr3.3:77637275-77637294 | None:intergenic | 25.0% |
| ! | GTTATGTTTGTATGTATTTC+TGG | - | chr3.3:77636651-77636670 | MS.gene06588:intron | 25.0% |
| ! | TAATATTTGCAGGTTATTGA+AGG | - | chr3.3:77639936-77639955 | MS.gene06588:intron | 25.0% |
| ! | TAGAAGAATGCATTAAAGTA+TGG | + | chr3.3:77638435-77638454 | None:intergenic | 25.0% |
| ! | TATAAAAACTTAACCCACTT+GGG | - | chr3.3:77639649-77639668 | MS.gene06588:CDS | 25.0% |
| ! | TATGACAAATCCACAAATTT+GGG | + | chr3.3:77638155-77638174 | None:intergenic | 25.0% |
| ! | TGTCAATAGAAAATGCATAA+AGG | - | chr3.3:77638890-77638909 | MS.gene06588:intron | 25.0% |
| ! | TTATGACAAATCCACAAATT+TGG | + | chr3.3:77638156-77638175 | None:intergenic | 25.0% |
| !! | AACAACTAGAATTGATTCTA+AGG | + | chr3.3:77636747-77636766 | None:intergenic | 25.0% |
| !! | ATATCCCATTAATCTTTTCT+AGG | - | chr3.3:77639452-77639471 | MS.gene06588:intron | 25.0% |
| !! | ATATCCCATTTATCTTTTCT+AGG | - | chr3.3:77639196-77639215 | MS.gene06588:intron | 25.0% |
| !! | CTCCAAATTTTACATATGAT+GGG | + | chr3.3:77638671-77638690 | None:intergenic | 25.0% |
| !! | CTTGTTACAATACTCATTTT+TGG | - | chr3.3:77638979-77638998 | MS.gene06588:intron | 25.0% |
| !! | GAAGTTATACTAACTCTTTT+TGG | + | chr3.3:77638555-77638574 | None:intergenic | 25.0% |
| !! | TTTTATCAAGAAGTAATTCC+TGG | - | chr3.3:77640140-77640159 | MS.gene06588:CDS | 25.0% |
| !!! | ACTATTGTTCTAGAACTATT+TGG | - | chr3.3:77639225-77639244 | MS.gene06588:intron | 25.0% |
| !!! | ATATGTTGATTTCAAAGAAG+AGG | - | chr3.3:77639986-77640005 | MS.gene06588:intron | 25.0% |
| !!! | CAAGATTTATAGGTTTTGTA+TGG | + | chr3.3:77639897-77639916 | None:intergenic | 25.0% |
| !!! | CTATTGTTCTAGAACTATTT+GGG | - | chr3.3:77639226-77639245 | MS.gene06588:intron | 25.0% |
| !!! | TAGAATTGATTCTAAGGTAA+CGG | + | chr3.3:77636741-77636760 | None:intergenic | 25.0% |
| !!! | TATAAGCTAATGGATTTTCT+TGG | - | chr3.3:77637348-77637367 | MS.gene06588:intron | 25.0% |
| AAAAATAGTATGTCACACAG+TGG | - | chr3.3:77638341-77638360 | MS.gene06588:intron | 30.0% | |
| AACACTTAGCATGAACAATA+AGG | + | chr3.3:77637206-77637225 | None:intergenic | 30.0% | |
| AGAATATTTCAGAAAGCTTG+TGG | - | chr3.3:77639537-77639556 | MS.gene06588:intron | 30.0% | |
| AGATAAACACTTACCAGATA+AGG | + | chr3.3:77639848-77639867 | None:intergenic | 30.0% | |
| AGGTTAAGTAGTTATTAGCA+AGG | + | chr3.3:77637306-77637325 | None:intergenic | 30.0% | |
| ATCAACAATTCAAGTACAGT+TGG | + | chr3.3:77639165-77639184 | None:intergenic | 30.0% | |
| ATGACAAATCCACAAATTTG+GGG | + | chr3.3:77638154-77638173 | None:intergenic | 30.0% | |
| ATTAGCTGAAAAACAGCTTA+TGG | + | chr3.3:77639332-77639351 | None:intergenic | 30.0% | |
| CAATCAAATTCTAGCATACA+AGG | + | chr3.3:77638404-77638423 | None:intergenic | 30.0% | |
| CACATTGAGTTAGTTCATTA+GGG | + | chr3.3:77637180-77637199 | None:intergenic | 30.0% | |
| CCAAACATACACTATTCTTA+TGG | - | chr3.3:77636770-77636789 | MS.gene06588:intron | 30.0% | |
| CCATAAGAATAGTGTATGTT+TGG | + | chr3.3:77636773-77636792 | None:intergenic | 30.0% | |
| CCATCATATGTAAAATTTGG+AGG | - | chr3.3:77638669-77638688 | MS.gene06588:CDS | 30.0% | |
| CCTTAATTTCAAATTAAGGG+AGG | + | chr3.3:77639047-77639066 | None:intergenic | 30.0% | |
| CTACAATGTGATTAAGATTG+AGG | - | chr3.3:77637058-77637077 | MS.gene06588:intron | 30.0% | |
| CTCAATCTTAATCACATTGT+AGG | + | chr3.3:77637060-77637079 | None:intergenic | 30.0% | |
| CTGAATCTGATATAAGCTAA+TGG | - | chr3.3:77637338-77637357 | MS.gene06588:intron | 30.0% | |
| CTGAGATGCAAATATTTACA+AGG | + | chr3.3:77637283-77637302 | None:intergenic | 30.0% | |
| CTTCACAGCTGAAAAAATAA+TGG | + | chr3.3:77639119-77639138 | None:intergenic | 30.0% | |
| CTTGTATGCTAGAATTTGAT+TGG | - | chr3.3:77638402-77638421 | MS.gene06588:intron | 30.0% | |
| CTTTCAATGAACTTATGATC+CGG | + | chr3.3:77637421-77637440 | None:intergenic | 30.0% | |
| GAAAAACAATATTCTCCTCA+AGG | + | chr3.3:77636797-77636816 | None:intergenic | 30.0% | |
| GAATACAAGAGCAAAATTGA+TGG | - | chr3.3:77636877-77636896 | MS.gene06588:intron | 30.0% | |
| GATAAACACTTACCAGATAA+GGG | + | chr3.3:77639847-77639866 | None:intergenic | 30.0% | |
| GTGACAATAAGCATTATTCT+AGG | + | chr3.3:77638298-77638317 | None:intergenic | 30.0% | |
| TAATGGCAGAGAGAAAATAT+TGG | + | chr3.3:77639102-77639121 | None:intergenic | 30.0% | |
| TGAAATTAAGGTGAAACTGT+TGG | - | chr3.3:77639056-77639075 | MS.gene06588:intron | 30.0% | |
| TTAAATATCGGTCACAGTAA+CGG | + | chr3.3:77637145-77637164 | None:intergenic | 30.0% | |
| TTAGCAACTGGATATGTATA+AGG | + | chr3.3:77636456-77636475 | None:intergenic | 30.0% | |
| TTAGCTTATAGCTTAACTAC+TGG | - | chr3.3:77639250-77639269 | MS.gene06588:intron | 30.0% | |
| TTTCTCATTTCTGATTCCAA+TGG | + | chr3.3:77640177-77640196 | None:intergenic | 30.0% | |
| ! | AAGCATTATTCTAGGAATCA+TGG | + | chr3.3:77638290-77638309 | None:intergenic | 30.0% |
| ! | AAGTAGATCTTTTCTTCTGT+TGG | - | chr3.3:77637633-77637652 | MS.gene06588:intron | 30.0% |
| ! | ATAAATGGGATATGCACTTT+TGG | + | chr3.3:77639189-77639208 | None:intergenic | 30.0% |
| ! | CCTCCAAATTTTACATATGA+TGG | + | chr3.3:77638672-77638691 | None:intergenic | 30.0% |
| ! | CCTCCCTTAATTTGAAATTA+AGG | - | chr3.3:77639044-77639063 | MS.gene06588:intron | 30.0% |
| ! | GAGGAAAAGAGAACATATTT+TGG | + | chr3.3:77639028-77639047 | None:intergenic | 30.0% |
| ! | GATGTTTTCATAAGCTATCA+TGG | + | chr3.3:77639367-77639386 | None:intergenic | 30.0% |
| ! | TAAAATTTGGAGGTACACTA+AGG | - | chr3.3:77638679-77638698 | MS.gene06588:CDS | 30.0% |
| ! | TCCTTCTTTTATCATTTGTG+AGG | + | chr3.3:77637805-77637824 | None:intergenic | 30.0% |
| ! | TTGAATTGTCTTTTGCTTAG+TGG | - | chr3.3:77637583-77637602 | MS.gene06588:intron | 30.0% |
| ! | TTTTATATAGCTAGCAGTCT+AGG | - | chr3.3:77638225-77638244 | MS.gene06588:intron | 30.0% |
| !! | AGAATTGATTCTAAGGTAAC+GGG | + | chr3.3:77636740-77636759 | None:intergenic | 30.0% |
| !! | ATCTTTGAGGCAAAAATTGA+AGG | - | chr3.3:77637927-77637946 | MS.gene06588:intron | 30.0% |
| !!! | ATGCTCAGGGTTTTAAATAT+CGG | + | chr3.3:77637157-77637176 | None:intergenic | 30.0% |
| AACCATAGATATGTTGCAAG+TGG | + | chr3.3:77638837-77638856 | None:intergenic | 35.0% | |
| ACATATCCAGTTGCTAAAAC+TGG | - | chr3.3:77636459-77636478 | MS.gene06588:CDS | 35.0% | |
| ACTGGTATTGTTGCTCAAAT+TGG | - | chr3.3:77636477-77636496 | MS.gene06588:CDS | 35.0% | |
| AGGCTAAAAACCAATTGTAG+AGG | - | chr3.3:77636699-77636718 | MS.gene06588:intron | 35.0% | |
| ATTGTTGCAACTAAAAGCCA+TGG | + | chr3.3:77638115-77638134 | None:intergenic | 35.0% | |
| CAACATATGCATTACATCTG+TGG | + | chr3.3:77639974-77639993 | None:intergenic | 35.0% | |
| CCAATGGAAAACAATATTCC+AGG | + | chr3.3:77640161-77640180 | None:intergenic | 35.0% | |
| CCACATTGAGTTAGTTCATT+AGG | + | chr3.3:77637181-77637200 | None:intergenic | 35.0% | |
| CCTAATGAACTAACTCAATG+TGG | - | chr3.3:77637178-77637197 | MS.gene06588:intron | 35.0% | |
| CTCATGCTACTATGCTATTA+GGG | - | chr3.3:77636926-77636945 | MS.gene06588:intron | 35.0% | |
| CTGATATACAAACCCTTATC+TGG | - | chr3.3:77639832-77639851 | MS.gene06588:intron | 35.0% | |
| GACAACTGACCATCATATAT+TGG | - | chr3.3:77638592-77638611 | MS.gene06588:CDS | 35.0% | |
| GCCTCACAAATGATAAAAGA+AGG | - | chr3.3:77637801-77637820 | MS.gene06588:CDS | 35.0% | |
| GGAACAAAGAGCTAAACATT+AGG | + | chr3.3:77637520-77637539 | None:intergenic | 35.0% | |
| GGAATCAGAAATGAGAAAGT+AGG | - | chr3.3:77640179-77640198 | MS.gene06588:CDS | 35.0% | |
| TACAATGACGTGCTAATTAC+CGG | - | chr3.3:77637399-77637418 | MS.gene06588:intron | 35.0% | |
| TATCAGATTCAGTGTGATTG+TGG | + | chr3.3:77637330-77637349 | None:intergenic | 35.0% | |
| TCATGCTACTATGCTATTAG+GGG | - | chr3.3:77636927-77636946 | MS.gene06588:intron | 35.0% | |
| TGAGACTTTCAGAAAGCTTA+TGG | - | chr3.3:77639285-77639304 | MS.gene06588:intron | 35.0% | |
| TGGTTCAATAAATGCATAGC+AGG | - | chr3.3:77638852-77638871 | MS.gene06588:intron | 35.0% | |
| TTAATCACATTGTAGGTCAG+TGG | + | chr3.3:77637053-77637072 | None:intergenic | 35.0% | |
| TTCCACTTGCAACATATCTA+TGG | - | chr3.3:77638832-77638851 | MS.gene06588:intron | 35.0% | |
| TTTCAGACAGCGATTAAAAG+AGG | - | chr3.3:77638728-77638747 | MS.gene06588:CDS | 35.0% | |
| TTTCATAAGCTATCATGGAG+AGG | + | chr3.3:77639362-77639381 | None:intergenic | 35.0% | |
| ! | ATTGTTGCTCAAATTGGTTC+TGG | - | chr3.3:77636483-77636502 | MS.gene06588:CDS | 35.0% |
| ! | CAACCAATCTTTTTCCTTCT+GGG | + | chr3.3:77636334-77636353 | None:intergenic | 35.0% |
| ! | CCTGGAATATTGTTTTCCAT+TGG | - | chr3.3:77640158-77640177 | MS.gene06588:CDS | 35.0% |
| ! | CTATTTTGTAGTGAAACCCT+TGG | - | chr3.3:77638452-77638471 | MS.gene06588:intron | 35.0% |
| ! | CTGTCTGTTACTTATGTCAA+AGG | - | chr3.3:77638624-77638643 | MS.gene06588:CDS | 35.0% |
| ! | CTGTTACTTATGTCAAAGGA+GGG | - | chr3.3:77638628-77638647 | MS.gene06588:CDS | 35.0% |
| ! | CTTTTAATCGCTGTCTGAAA+TGG | + | chr3.3:77638728-77638747 | None:intergenic | 35.0% |
| ! | GAACTCTACTTCACAACTTT+TGG | - | chr3.3:77637375-77637394 | MS.gene06588:intron | 35.0% |
| ! | GATGTTTTCATAAGCTATCC+TGG | + | chr3.3:77639619-77639638 | None:intergenic | 35.0% |
| ! | TCTGTTACTTATGTCAAAGG+AGG | - | chr3.3:77638627-77638646 | MS.gene06588:CDS | 35.0% |
| ! | TGTTACTTATGTCAAAGGAG+GGG | - | chr3.3:77638629-77638648 | MS.gene06588:CDS | 35.0% |
| ! | TTTTTGTCATTGACAACAGC+AGG | + | chr3.3:77640026-77640045 | None:intergenic | 35.0% |
| !! | ACAATACCAGTTTTAGCAAC+TGG | + | chr3.3:77636468-77636487 | None:intergenic | 35.0% |
| !! | AGGTTTTGTGCTATTGTTCT+AGG | - | chr3.3:77639472-77639491 | MS.gene06588:intron | 35.0% |
| !! | GTTTAGCTCTTTGTTCCTTT+AGG | - | chr3.3:77637523-77637542 | MS.gene06588:intron | 35.0% |
| !!! | AAACTGTTGGCTTTTGTCTT+AGG | - | chr3.3:77639069-77639088 | MS.gene06588:intron | 35.0% |
| AAAACTTAACCCACTTGGGT+TGG | - | chr3.3:77639653-77639672 | MS.gene06588:CDS | 40.0% | |
| AAATGCTTGGCTTCTCTCTT+TGG | - | chr3.3:77638193-77638212 | MS.gene06588:intron | 40.0% | |
| AAGACTGTCATCCTACTCTT+TGG | - | chr3.3:77637718-77637737 | MS.gene06588:intron | 40.0% | |
| ACACACTTAAGGAGCTAAAG+TGG | + | chr3.3:77636567-77636586 | None:intergenic | 40.0% | |
| ACACTTAAGGAGCTAAAGTG+GGG | + | chr3.3:77636565-77636584 | None:intergenic | 40.0% | |
| ACACTTCACCAAGGTACAAA+GGG | + | chr3.3:77636280-77636299 | None:intergenic | 40.0% | |
| ACAGCTCAACACTATCACTT+AGG | + | chr3.3:77638940-77638959 | None:intergenic | 40.0% | |
| AGATTCAGTGTGATTGTGGA+AGG | + | chr3.3:77637326-77637345 | None:intergenic | 40.0% | |
| ATAAGCATCACACTTCACCA+AGG | + | chr3.3:77636289-77636308 | None:intergenic | 40.0% | |
| ATTGATGCTACGACATCTAC+TGG | - | chr3.3:77637861-77637880 | MS.gene06588:CDS | 40.0% | |
| CAAGTTTGTCAAGTTCACTG+CGG | + | chr3.3:77636428-77636447 | None:intergenic | 40.0% | |
| CAATGTTCATGAAGCCAAGA+AGG | - | chr3.3:77640094-77640113 | MS.gene06588:CDS | 40.0% | |
| CACAACCAAACACACACTTA+AGG | + | chr3.3:77636578-77636597 | None:intergenic | 40.0% | |
| CACACTTAAGGAGCTAAAGT+GGG | + | chr3.3:77636566-77636585 | None:intergenic | 40.0% | |
| CACTATTCTTATGGTCCTTG+AGG | - | chr3.3:77636779-77636798 | MS.gene06588:intron | 40.0% | |
| CCAGAAGGAAAAAGATTGGT+TGG | - | chr3.3:77636332-77636351 | MS.gene06588:CDS | 40.0% | |
| GACAGCGATTAAAAGAGGTA+TGG | - | chr3.3:77638733-77638752 | MS.gene06588:CDS | 40.0% | |
| GATGAGGAAGCTCTTTCAAT+TGG | - | chr3.3:77640239-77640258 | MS.gene06588:CDS | 40.0% | |
| GATTCATCAACACCCAGAAT+TGG | - | chr3.3:77636371-77636390 | MS.gene06588:CDS | 40.0% | |
| GCACATACTTGACTATGAAG+AGG | + | chr3.3:77638056-77638075 | None:intergenic | 40.0% | |
| GCTCATGCTACTATGCTATT+AGG | - | chr3.3:77636925-77636944 | MS.gene06588:intron | 40.0% | |
| GGCTACATCATTGGCAATAT+TGG | - | chr3.3:77637998-77638017 | MS.gene06588:intron | 40.0% | |
| GTCATGATCCTTAAGATTGC+AGG | + | chr3.3:77637112-77637131 | None:intergenic | 40.0% | |
| GTTCTTGGAAAGCCAATTCT+GGG | + | chr3.3:77636386-77636405 | None:intergenic | 40.0% | |
| TAAGTAACAGACAGTACCTG+TGG | + | chr3.3:77638618-77638637 | None:intergenic | 40.0% | |
| TACCTGTGGCCAATATATGA+TGG | + | chr3.3:77638604-77638623 | None:intergenic | 40.0% | |
| TAGCTCCTTAAGTGTGTGTT+TGG | - | chr3.3:77636570-77636589 | MS.gene06588:CDS | 40.0% | |
| TAGTTCATTAGGGATGCTCA+GGG | + | chr3.3:77637170-77637189 | None:intergenic | 40.0% | |
| TCAGCGCAAAGATAAGCTTA+AGG | - | chr3.3:77636966-77636985 | MS.gene06588:intron | 40.0% | |
| TCATTGACAACAGCAGGATA+TGG | + | chr3.3:77640020-77640039 | None:intergenic | 40.0% | |
| TGTTCTTGGAAAGCCAATTC+TGG | + | chr3.3:77636387-77636406 | None:intergenic | 40.0% | |
| TTAGTTCATTAGGGATGCTC+AGG | + | chr3.3:77637171-77637190 | None:intergenic | 40.0% | |
| TTCACAGCAAGAACTATCCA+TGG | - | chr3.3:77638095-77638114 | MS.gene06588:intron | 40.0% | |
| TTGGCTTCATGAACATTGTC+TGG | + | chr3.3:77640092-77640111 | None:intergenic | 40.0% | |
| TTTCATAAGCTATCCTGGAG+AGG | + | chr3.3:77639614-77639633 | None:intergenic | 40.0% | |
| TTTGCAGGTTATTGAAGGAC+AGG | - | chr3.3:77639941-77639960 | MS.gene06588:intron | 40.0% | |
| ! | AAGTGATAGTGTTGAGCTGT+AGG | - | chr3.3:77638940-77638959 | MS.gene06588:intron | 40.0% |
| ! | AGAGCTTTTGCCTCTACAAT+TGG | + | chr3.3:77636712-77636731 | None:intergenic | 40.0% |
| ! | ATTCTCACCGGTGTCAATTT+GGG | - | chr3.3:77639733-77639752 | MS.gene06588:intron | 40.0% |
| ! | CCAACCAATCTTTTTCCTTC+TGG | + | chr3.3:77636335-77636354 | None:intergenic | 40.0% |
| ! | CTATTGTTCTAGGCCTGTTT+GGG | - | chr3.3:77639482-77639501 | MS.gene06588:intron | 40.0% |
| ! | CTTTTCTTCTGTTGGTGTGT+TGG | - | chr3.3:77637641-77637660 | MS.gene06588:intron | 40.0% |
| ! | TTGTCTTTTGCTTAGTGGTG+TGG | - | chr3.3:77637588-77637607 | MS.gene06588:intron | 40.0% |
| !! | ACGTTGCTGTTTCTTACCAA+GGG | + | chr3.3:77638471-77638490 | None:intergenic | 40.0% |
| !! | TACGTTGCTGTTTCTTACCA+AGG | + | chr3.3:77638472-77638491 | None:intergenic | 40.0% |
| !! | TATCTGATGTTGGTGATGCT+TGG | - | chr3.3:77636835-77636854 | MS.gene06588:intron | 40.0% |
| !! | TGGTTAGGAACTTGTTGAGT+GGG | - | chr3.3:77636855-77636874 | MS.gene06588:intron | 40.0% |
| !! | TTGGTTAGGAACTTGTTGAG+TGG | - | chr3.3:77636854-77636873 | MS.gene06588:intron | 40.0% |
| AAAGTGGGGTAACCTGCAAA+GGG | + | chr3.3:77636551-77636570 | None:intergenic | 45.0% | |
| ACTGCAACAGCTTGTCTCAA+GGG | - | chr3.3:77638022-77638041 | MS.gene06588:intron | 45.0% | |
| ATCAGCACGAATAGCGATGA+TGG | + | chr3.3:77636517-77636536 | None:intergenic | 45.0% | |
| ATGCACTTCCCTTTGTACCT+TGG | - | chr3.3:77636269-77636288 | MS.gene06588:CDS | 45.0% | |
| ATGCATCCAGCAGCTGTAAA+AGG | + | chr3.3:77637909-77637928 | None:intergenic | 45.0% | |
| ATGCTTATTGTCACGAGACG+AGG | - | chr3.3:77638304-77638323 | MS.gene06588:intron | 45.0% | |
| CACACTTCACCAAGGTACAA+AGG | + | chr3.3:77636281-77636300 | None:intergenic | 45.0% | |
| CAGCCCAGAAGGAAAAAGAT+TGG | - | chr3.3:77636328-77636347 | MS.gene06588:CDS | 45.0% | |
| CAGGAAATCGCGTTCAAATG+CGG | + | chr3.3:77637093-77637112 | None:intergenic | 45.0% | |
| CATCTACATGTCGAGAGAGT+TGG | - | chr3.3:77640050-77640069 | MS.gene06588:CDS | 45.0% | |
| CGCAGTGAACTTGACAAACT+TGG | - | chr3.3:77636426-77636445 | MS.gene06588:CDS | 45.0% | |
| CGCGATTTCCTGCAATCTTA+AGG | - | chr3.3:77637101-77637120 | MS.gene06588:intron | 45.0% | |
| GACCATCATATATTGGCCAC+AGG | - | chr3.3:77638599-77638618 | MS.gene06588:CDS | 45.0% | |
| GAGAAACGTCCCCAAATTTG+TGG | - | chr3.3:77638142-77638161 | MS.gene06588:intron | 45.0% | |
| GATCTCAAGCCAATACCACT+AGG | + | chr3.3:77639679-77639698 | None:intergenic | 45.0% | |
| GCTAATGTCATAACCTCTCC+AGG | - | chr3.3:77639598-77639617 | MS.gene06588:CDS | 45.0% | |
| GTCAAGTTCACTGCGGATAA+GGG | + | chr3.3:77636421-77636440 | None:intergenic | 45.0% | |
| TAAAGTGGGGTAACCTGCAA+AGG | + | chr3.3:77636552-77636571 | None:intergenic | 45.0% | |
| TACACTAAGGAGCCAGACAA+CGG | - | chr3.3:77638692-77638711 | MS.gene06588:CDS | 45.0% | |
| TCAGCACGAATAGCGATGAT+GGG | + | chr3.3:77636516-77636535 | None:intergenic | 45.0% | |
| TGTCAAGTTCACTGCGGATA+AGG | + | chr3.3:77636422-77636441 | None:intergenic | 45.0% | |
| ! | ACTTCTTTTCCAACCTGCTG+AGG | - | chr3.3:77637764-77637783 | MS.gene06588:intron | 45.0% |
| ! | CATCGCTATTCGTGCTGATA+TGG | - | chr3.3:77636518-77636537 | MS.gene06588:CDS | 45.0% |
| ! | GAGGCAAAAATTGAAGGCGT+AGG | - | chr3.3:77637933-77637952 | MS.gene06588:intron | 45.0% |
| ! | GATTCTCACCGGTGTCAATT+TGG | - | chr3.3:77639732-77639751 | MS.gene06588:intron | 45.0% |
| ! | GCAAAAATTGAAGGCGTAGG+TGG | - | chr3.3:77637936-77637955 | MS.gene06588:intron | 45.0% |
| ! | GCTATTGTTCTAGGCCTGTT+TGG | - | chr3.3:77639481-77639500 | MS.gene06588:intron | 45.0% |
| ! | GCTCTAAGCTAAACCCAAAC+AGG | + | chr3.3:77639498-77639517 | None:intergenic | 45.0% |
| ! | TAGTGGATCTACAGTCTGGT+GGG | + | chr3.3:77637976-77637995 | None:intergenic | 45.0% |
| ! | TCCACTACTGGCTACATCAT+TGG | - | chr3.3:77637989-77638008 | MS.gene06588:intron | 45.0% |
| !! | AGTGGTATTGGCTTGAGATC+TGG | - | chr3.3:77639679-77639698 | MS.gene06588:intron | 45.0% |
| !! | GAGCTATAGCATCGATTCCA+GGG | - | chr3.3:77637883-77637902 | MS.gene06588:CDS | 45.0% |
| !! | GATGTTGGTGATGCTTGGTT+AGG | - | chr3.3:77636840-77636859 | MS.gene06588:intron | 45.0% |
| !! | TTGGCTTCTCTCTTTGGAAC+TGG | - | chr3.3:77638199-77638218 | MS.gene06588:intron | 45.0% |
| AACAGCAGGATATGGCGTGA+AGG | + | chr3.3:77640012-77640031 | None:intergenic | 50.0% | |
| AGCTGCTGGATGCATCTTTG+AGG | - | chr3.3:77637914-77637933 | MS.gene06588:intron | 50.0% | |
| AGTGGATCTACAGTCTGGTG+GGG | + | chr3.3:77637975-77637994 | None:intergenic | 50.0% | |
| CACTGCAACAGCTTGTCTCA+AGG | - | chr3.3:77638021-77638040 | MS.gene06588:intron | 50.0% | |
| CCAGACTGTAGATCCACTAC+TGG | - | chr3.3:77637977-77637996 | MS.gene06588:intron | 50.0% | |
| GAAATCGCGTTCAAATGCGG+CGG | + | chr3.3:77637090-77637109 | None:intergenic | 50.0% | |
| GATGGCAGAATGCATGCTTG+TGG | - | chr3.3:77636895-77636914 | MS.gene06588:intron | 50.0% | |
| GATTCTGAGTTCAGCCCAGA+AGG | - | chr3.3:77636317-77636336 | MS.gene06588:CDS | 50.0% | |
| GCCAATGATGTAGCCAGTAG+TGG | + | chr3.3:77637993-77638012 | None:intergenic | 50.0% | |
| GGGCACTTGTGTTGTGTTCT+TGG | + | chr3.3:77636401-77636420 | None:intergenic | 50.0% | |
| GGTACATGCTTTCCGTTGTC+TGG | + | chr3.3:77638707-77638726 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGATTCTCAC+CGG | - | chr3.3:77639721-77639740 | MS.gene06588:intron | 50.0% | |
| TAGCCCACCCAAATTGACAC+CGG | + | chr3.3:77639743-77639762 | None:intergenic | 50.0% | |
| TATGGATGCACTCCCTTTGC+AGG | - | chr3.3:77636536-77636555 | MS.gene06588:CDS | 50.0% | |
| TCATGAAGCCAAGAAGGCGA+TGG | - | chr3.3:77640100-77640119 | MS.gene06588:CDS | 50.0% | |
| TGTCTGGACCAAGCAGAAGT+CGG | + | chr3.3:77640076-77640095 | None:intergenic | 50.0% | |
| ! | CTTTTCCAACCTGCTGAGGA+GGG | - | chr3.3:77637768-77637787 | MS.gene06588:intron | 50.0% |
| ! | TCACCGGTGTCAATTTGGGT+GGG | - | chr3.3:77639737-77639756 | MS.gene06588:intron | 50.0% |
| ! | TCTTTTCCAACCTGCTGAGG+AGG | - | chr3.3:77637767-77637786 | MS.gene06588:intron | 50.0% |
| !! | CCAGTAGTGGATCTACAGTC+TGG | + | chr3.3:77637980-77637999 | None:intergenic | 50.0% |
| !! | GGAGCTATAGCATCGATTCC+AGG | - | chr3.3:77637882-77637901 | MS.gene06588:CDS | 50.0% |
| !! | GTAGTGGATCTACAGTCTGG+TGG | + | chr3.3:77637977-77637996 | None:intergenic | 50.0% |
| !! | TTGGGTTGGCCTAGTGGTAT+TGG | - | chr3.3:77639667-77639686 | MS.gene06588:CDS | 50.0% |
| ACCACTAGGCCAACCCAAGT+GGG | + | chr3.3:77639665-77639684 | None:intergenic | 55.0% | |
| GAAGCCAAGAAGGCGATGGT+AGG | - | chr3.3:77640104-77640123 | MS.gene06588:CDS | 55.0% | |
| GAATCGAACCTGAGACCTCG+AGG | + | chr3.3:77639717-77639736 | None:intergenic | 55.0% | |
| GTGGATCTACAGTCTGGTGG+GGG | + | chr3.3:77637974-77637993 | None:intergenic | 55.0% | |
| TACCACTAGGCCAACCCAAG+TGG | + | chr3.3:77639666-77639685 | None:intergenic | 55.0% | |
| TTCGCCTACCATCGCCTTCT+TGG | + | chr3.3:77640111-77640130 | None:intergenic | 55.0% | |
| ! | AGAGTTGGCCGACTTCTGCT+TGG | - | chr3.3:77640065-77640084 | MS.gene06588:CDS | 55.0% |
| ! | CTCACCGGTGTCAATTTGGG+TGG | - | chr3.3:77639736-77639755 | MS.gene06588:intron | 55.0% |
| CCAGCAGCTGTAAAAGGCCC+TGG | + | chr3.3:77637903-77637922 | None:intergenic | 60.0% | |
| GCGTTCAAATGCGGCGGATG+AGG | + | chr3.3:77637084-77637103 | None:intergenic | 60.0% | |
| TAGCTCCCTCCTCAGCAGGT+TGG | + | chr3.3:77637776-77637795 | None:intergenic | 60.0% | |
| TCGAACCTGAGACCTCGAGG+AGG | + | chr3.3:77639714-77639733 | None:intergenic | 60.0% | |
| ! | CCAGGGCCTTTTACAGCTGC+TGG | - | chr3.3:77637900-77637919 | MS.gene06588:CDS | 60.0% |
| ! | TGGAAGTGTGCTCCTCCTCG+AGG | - | chr3.3:77639699-77639718 | MS.gene06588:intron | 60.0% |
| !! | ACCCACTTGGGTTGGCCTAG+TGG | - | chr3.3:77639661-77639680 | MS.gene06588:CDS | 60.0% |
| CCTGCTGAGGAGGGAGCTAG+AGG | - | chr3.3:77637777-77637796 | MS.gene06588:intron | 65.0% | |
| GTGCTCCTCCTCGAGGTCTC+AGG | - | chr3.3:77639706-77639725 | MS.gene06588:intron | 65.0% | |
| ! | CCTCTAGCTCCCTCCTCAGC+AGG | + | chr3.3:77637780-77637799 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 77636234 | 77640316 | 77636234 | ID=MS.gene06588 |
| chr3.3 | mRNA | 77636234 | 77640316 | 77636234 | ID=MS.gene06588.t1;Parent=MS.gene06588 |
| chr3.3 | exon | 77639993 | 77640316 | 77639993 | ID=MS.gene06588.t1.exon1;Parent=MS.gene06588.t1 |
| chr3.3 | CDS | 77639993 | 77640316 | 77639993 | ID=cds.MS.gene06588.t1;Parent=MS.gene06588.t1 |
| chr3.3 | exon | 77639563 | 77639688 | 77639563 | ID=MS.gene06588.t1.exon2;Parent=MS.gene06588.t1 |
| chr3.3 | CDS | 77639563 | 77639688 | 77639563 | ID=cds.MS.gene06588.t1;Parent=MS.gene06588.t1 |
| chr3.3 | exon | 77638483 | 77638797 | 77638483 | ID=MS.gene06588.t1.exon3;Parent=MS.gene06588.t1 |
| chr3.3 | CDS | 77638483 | 77638797 | 77638483 | ID=cds.MS.gene06588.t1;Parent=MS.gene06588.t1 |
| chr3.3 | exon | 77637801 | 77637929 | 77637801 | ID=MS.gene06588.t1.exon4;Parent=MS.gene06588.t1 |
| chr3.3 | CDS | 77637801 | 77637929 | 77637801 | ID=cds.MS.gene06588.t1;Parent=MS.gene06588.t1 |
| chr3.3 | exon | 77636234 | 77636602 | 77636234 | ID=MS.gene06588.t1.exon5;Parent=MS.gene06588.t1 |
| chr3.3 | CDS | 77636234 | 77636602 | 77636234 | ID=cds.MS.gene06588.t1;Parent=MS.gene06588.t1 |
| Gene Sequence |
| Protein sequence |
