AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36383

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36383.t1 MTR_2g100510 91.499 447 30 1 1 439 1 447 0.0 824
MS.gene36383.t1 MTR_2g100560 87.229 415 53 0 25 439 38 452 0.0 746
MS.gene36383.t1 MTR_2g097530 83.221 447 67 2 1 439 1 447 0.0 738
MS.gene36383.t1 MTR_2g097540 81.390 446 73 3 1 439 1 443 0.0 727
MS.gene36383.t1 MTR_2g100520 80.537 447 79 2 1 439 1 447 0.0 723
MS.gene36383.t1 MTR_8g015510 70.455 440 123 4 3 439 12 447 0.0 612
MS.gene36383.t1 MTR_8g015510 72.171 327 88 3 116 439 1 327 4.29e-162 460
MS.gene36383.t1 MTR_3g088590 55.928 388 171 0 34 421 85 472 1.85e-160 461
MS.gene36383.t1 MTR_8g062790 53.976 415 188 2 7 420 12 424 1.06e-156 450
MS.gene36383.t1 MTR_8g075310 53.186 408 173 4 10 417 24 413 3.29e-144 418
MS.gene36383.t1 MTR_3g093030 51.323 378 184 0 44 421 38 415 1.76e-138 403
MS.gene36383.t1 MTR_2g100550 84.568 162 15 2 1 155 1 159 3.09e-82 265
MS.gene36383.t1 MTR_8g063060 44.551 312 141 8 114 422 58 340 1.90e-72 233
MS.gene36383.t1 MTR_1g028070 69.298 114 35 0 147 260 14 127 1.41e-47 159
MS.gene36383.t1 MTR_3g077040 51.493 134 41 2 129 262 1 110 2.45e-32 119
MS.gene36383.t1 MTR_2g100530 74.138 58 15 0 382 439 12 69 8.55e-22 89.0
MS.gene36383.t1 MTR_1205s0010 31.548 168 109 3 243 409 1 163 5.49e-20 87.0
MS.gene36383.t1 MTR_3g093040 44.554 101 46 1 129 219 1 101 2.43e-18 85.9
MS.gene36383.t1 MTR_8g062090 50.877 114 18 3 155 262 29 110 1.43e-17 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36383.t1 AT1G51760 70.188 426 125 2 1 424 1 426 0.0 623
MS.gene36383.t1 AT1G51780 65.566 424 144 2 1 422 1 424 0.0 561
MS.gene36383.t1 AT5G56660 62.564 390 143 2 32 421 37 423 0.0 518
MS.gene36383.t1 AT5G56650 62.821 390 142 2 32 421 36 422 9.56e-179 506
MS.gene36383.t1 AT5G56650 67.958 284 88 2 24 306 27 308 1.39e-137 397
MS.gene36383.t1 AT3G02875 50.900 389 191 0 33 421 39 427 8.80e-137 400
MS.gene36383.t1 AT1G44350 50.761 394 189 1 32 425 75 463 4.66e-136 399
MS.gene36383.t1 AT5G54140 49.604 379 190 1 44 421 39 417 1.22e-131 386
MS.gene36383.t1 AT3G02875 55.515 272 121 0 34 305 40 311 2.04e-105 316
MS.gene36383.t1 AT3G02875 57.522 226 96 0 37 262 43 268 6.40e-90 275

Find 107 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAATGTCTCTGCCATATT+TGG 0.135934 2.2:+2653309 MS.gene36383:CDS
CACCTAAAGGTAAGTTATTT+AGG 0.196492 2.2:-2653341 None:intergenic
CACATTGGAAGTTGCCAATA+TGG 0.228196 2.2:-2653469 None:intergenic
GCTCATGTTGCTATGCTTCT+TGG 0.234508 2.2:+2651637 MS.gene36383:CDS
TTGCATGCCTTTAACTTTAT+CGG 0.250948 2.2:-2655185 None:intergenic
TTCATGCATCATTAGCTTCT+AGG 0.252610 2.2:+2655365 MS.gene36383:CDS
CTTGGCGCCGATAAAGTTAA+AGG 0.263393 2.2:+2655178 MS.gene36383:CDS
ATCTTCGTTGACTTTGAAAT+AGG 0.270714 2.2:-2655320 None:intergenic
CTTTAGGTGAAGTGGCTTCT+AGG 0.272403 2.2:+2653355 MS.gene36383:CDS
TAAGCTTATAAGAACAAAAT+TGG 0.272704 2.2:+2651278 MS.gene36383:CDS
GTTGCAGTGACAGGTGTTAT+TGG 0.296181 2.2:+2651330 MS.gene36383:CDS
TGTTGCTCTTAGAGCTGATA+TGG 0.302889 2.2:+2651380 MS.gene36383:CDS
TTGATTGGATGGTTGATATA+AGG 0.308095 2.2:+2651205 MS.gene36383:CDS
TTGGCTAAATCAAGAAACTT+TGG 0.328046 2.2:-2651168 None:intergenic
TGGCTAAATCAAGAAACTTT+GGG 0.334139 2.2:-2651167 None:intergenic
AGAACAAAATTGGATGAATT+AGG 0.334989 2.2:+2651288 MS.gene36383:CDS
CATCCATGGGTTTCTTCAAA+TGG 0.336678 2.2:+2651073 None:intergenic
TATGGATGCTCTCCTTATTC+AGG 0.340492 2.2:+2651398 MS.gene36383:CDS
AGGTCTGGTCCTATATTTGC+AGG 0.341279 2.2:+2653375 MS.gene36383:CDS
CCACCAATTGTGACAGAGTC+TGG 0.344591 2.2:-2654002 None:intergenic
AAGCCATTGCCTGCAAATAT+AGG 0.352594 2.2:-2653384 None:intergenic
AATTCCTCATAACCAAGTTC+AGG 0.364088 2.2:-2651246 None:intergenic
CCACCACCTCCTTCTTCTGC+TGG 0.366853 2.2:-2653255 None:intergenic
TAGGACATGCAATCCAAATA+TGG 0.370327 2.2:-2653322 None:intergenic
TCTTCGTTGACTTTGAAATA+GGG 0.375069 2.2:-2655319 None:intergenic
GTCCTAAATAACTTACCTTT+AGG 0.377975 2.2:+2653339 MS.gene36383:CDS
TAAAGGCATGCAACCGATGA+TGG 0.399437 2.2:+2655195 MS.gene36383:CDS
GGTGAAGTGGCTTCTAGGTC+TGG 0.399799 2.2:+2653360 MS.gene36383:CDS
CCACATGCATGCATCTTTCC+AGG 0.416417 2.2:-2651607 None:intergenic
GATTGATCCCCTTGACTCTC+AGG 0.423067 2.2:+2653524 MS.gene36383:CDS
GTTATTGGTTACATAGGAAC+TGG 0.430657 2.2:+2651345 MS.gene36383:CDS
ACATTGGAAGTTGCCAATAT+GGG 0.436989 2.2:-2653468 None:intergenic
TTCTATCAAGAGGCTATGCC+TGG 0.441380 2.2:+2655235 MS.gene36383:CDS
ACATTCTATAGACCCCATAT+TGG 0.441418 2.2:+2653455 MS.gene36383:CDS
CATTTAGGAATTGGTGGAGT+GGG 0.444675 2.2:+2651567 MS.gene36383:intron
CCACCATTGTTTACAGTTGG+AGG 0.446062 2.2:-2655118 None:intergenic
ATCCATGGGTTTCTTCAAAT+GGG 0.446535 2.2:+2651074 None:intergenic
AGTGTCGCCGGGAGTTTGCT+TGG 0.458076 2.2:+2655160 MS.gene36383:CDS
ATTCCAGACTCTGTCACAAT+TGG 0.459091 2.2:+2653999 MS.gene36383:CDS
GTATCTGCTCAAATTGCATC+AGG 0.476322 2.2:+2655387 MS.gene36383:CDS
AGAAAGACTTCTCTTCTTCA+AGG 0.478302 2.2:-2655093 None:intergenic
TTAAAGCAGTAATAAGCGGC+AGG 0.482496 2.2:+2653409 MS.gene36383:CDS
TCATTGATGTAGATTATCAC+TGG 0.486477 2.2:+2655031 MS.gene36383:intron
CCAGCAGAAGAAGGAGGTGG+TGG 0.487742 2.2:+2653255 MS.gene36383:CDS
GAATCCTGAACTTGGTTATG+AGG 0.491210 2.2:+2651242 MS.gene36383:CDS
AACGAAGATGCACTTCCTTA+CGG 0.498146 2.2:+2655334 MS.gene36383:CDS
CTAGAAGCCACTTCACCTAA+AGG 0.501909 2.2:-2653354 None:intergenic
GGTCCTATATTTGCAGGCAA+TGG 0.503771 2.2:+2653381 MS.gene36383:CDS
TAACTTACCTTTAGGTGAAG+TGG 0.503980 2.2:+2653347 MS.gene36383:CDS
CCAGACTCTGTCACAATTGG+TGG 0.504423 2.2:+2654002 MS.gene36383:CDS
TTGACTGTAGCAATGATTCA+AGG 0.505434 2.2:+2653957 MS.gene36383:CDS
GTGGTCATTTGAAGTGGAAG+AGG 0.507634 2.2:-2651136 None:intergenic
CGATATTTCCCCACTACTAC+CGG 0.511619 2.2:-2655415 None:intergenic
GAAACTTTGGGATTGATAAG+TGG 0.512167 2.2:-2651155 None:intergenic
AAACATTCAGTTGCAGTGAC+AGG 0.515986 2.2:+2651321 MS.gene36383:CDS
ATTCATGAGAATCCTGAACT+TGG 0.516390 2.2:+2651234 MS.gene36383:CDS
ACAGGTGTTATTGGTTACAT+AGG 0.522130 2.2:+2651339 MS.gene36383:CDS
CCGAGGAGGAATATGTATCC+AGG 0.527098 2.2:-2655253 None:intergenic
TGATAAGTGGTCATTTGAAG+TGG 0.531029 2.2:-2651142 None:intergenic
GCATGAAGTGCAGCGCCGTA+AGG 0.538872 2.2:-2655349 None:intergenic
GATGTTTACCTGAGAGTCAA+GGG 0.542271 2.2:-2653532 None:intergenic
CAAATTGCATCAGGAGGTAC+CGG 0.542512 2.2:+2655396 MS.gene36383:CDS
CACCATTGTTTACAGTTGGA+GGG 0.545946 2.2:-2655117 None:intergenic
ATCGGCGCCAAGCAAACTCC+CGG 0.548375 2.2:-2655167 None:intergenic
AAAGGCATGCAACCGATGAT+GGG 0.549067 2.2:+2655196 MS.gene36383:CDS
AAGCCACCATTGTTTACAGT+TGG 0.550635 2.2:-2655121 None:intergenic
ATACATATTCCTCCTCGGAA+TGG 0.552217 2.2:+2655258 MS.gene36383:CDS
ACTGAGACACCGCATTGAGC+AGG 0.554810 2.2:+2654061 MS.gene36383:CDS
TCAGTTGAACATCTTCCGTC+GGG 0.557198 2.2:+2655289 MS.gene36383:CDS
ATTGGATGGTTGATATAAGG+AGG 0.557920 2.2:+2651208 MS.gene36383:CDS
TCAGCTCTAAGAGCAACAAA+AGG 0.559301 2.2:-2651375 None:intergenic
AGACTTTGCATTCTATCAAG+AGG 0.559534 2.2:+2655225 MS.gene36383:CDS
CTCAGTTGAACATCTTCCGT+CGG 0.561751 2.2:+2655288 MS.gene36383:CDS
CAGGAGGTACCGGTAGTAGT+GGG 0.563313 2.2:+2655406 MS.gene36383:CDS
CAGCAGAAGAAGGAGGTGGT+GGG 0.577188 2.2:+2653256 MS.gene36383:CDS
GCTCTAAGAGCAACAAAAGG+AGG 0.577757 2.2:-2651372 None:intergenic
CCTGGATACATATTCCTCCT+CGG 0.577905 2.2:+2655253 MS.gene36383:CDS
CAAGGAAGCTGACTGTTGCA+TGG 0.578278 2.2:-2655075 None:intergenic
AGATGTTTACCTGAGAGTCA+AGG 0.578610 2.2:-2653533 None:intergenic
AAGTCTTCTGATCCCATCAT+CGG 0.585289 2.2:-2655208 None:intergenic
CAACCAGCAGAAGAAGGAGG+TGG 0.586751 2.2:+2653252 MS.gene36383:CDS
TCAGGAGGTACCGGTAGTAG+TGG 0.592007 2.2:+2655405 MS.gene36383:CDS
TTCTTTAAAGCAGTAATAAG+CGG 0.596096 2.2:+2653405 MS.gene36383:CDS
AGCAGAAGAAGGAGGTGGTG+GGG 0.597355 2.2:+2653257 MS.gene36383:CDS
GAGCATAAGAGTAAAGTACC+TGG 0.604715 2.2:+2651589 MS.gene36383:CDS
GCATTTAGGAATTGGTGGAG+TGG 0.605092 2.2:+2651566 MS.gene36383:intron
GACCCATTTGAAGAAACCCA+TGG 0.609033 2.2:-2651076 None:intergenic
GTAGCAATGATTCAAGGAGG+TGG 0.610384 2.2:+2653963 MS.gene36383:CDS
TAAAGCAGTAATAAGCGGCA+GGG 0.613473 2.2:+2653410 MS.gene36383:CDS
GCAGTAATAAGCGGCAGGGG+AGG 0.613983 2.2:+2653414 MS.gene36383:CDS
TTCCCTCCAACTGTAAACAA+TGG 0.616637 2.2:+2655115 MS.gene36383:CDS
TTGTAAGCTAACAATCACAT+TGG 0.619856 2.2:-2653484 None:intergenic
CATTGGAAGTTGCCAATATG+GGG 0.619988 2.2:-2653467 None:intergenic
CCTCCAACTGTAAACAATGG+TGG 0.625041 2.2:+2655118 MS.gene36383:CDS
AAAGCAGTAATAAGCGGCAG+GGG 0.627829 2.2:+2653411 MS.gene36383:CDS
GTCTATAGAATGTTGAGGAA+TGG 0.631178 2.2:-2653445 None:intergenic
TTTCAACCAGCAGAAGAAGG+AGG 0.636316 2.2:+2653249 MS.gene36383:CDS
AAATAGGGTGAGTGTCCCGA+CGG 0.639877 2.2:-2655304 None:intergenic
ATGGGGTCTATAGAATGTTG+AGG 0.640598 2.2:-2653450 None:intergenic
CTGAGACATCTTCCATTCCG+AGG 0.655881 2.2:-2655270 None:intergenic
AGGAGGTACCGGTAGTAGTG+GGG 0.672269 2.2:+2655407 MS.gene36383:CDS
ATGTTTACCTGAGAGTCAAG+GGG 0.682496 2.2:-2653531 None:intergenic
TCTGCTCAAATTGCATCAGG+AGG 0.685331 2.2:+2655390 MS.gene36383:CDS
AGACATCTTCCATTCCGAGG+AGG 0.717446 2.2:-2655267 None:intergenic
ACTGTAGCAATGATTCAAGG+AGG 0.729288 2.2:+2653960 MS.gene36383:CDS
CCTGGAAAGATGCATGCATG+TGG 0.730006 2.2:+2651607 MS.gene36383:CDS
CATAACAGACCTGCTCAATG+CGG 0.730675 2.2:-2654070 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAGGAAAAAATAATAAT+AGG - chr2.2:2653142-2653161 None:intergenic 10.0%
!! AAAAACAAATAAAGTACAAA+TGG + chr2.2:2652352-2652371 MS.gene36383:intron 15.0%
!! AAAATTGTATAAGCTATAAA+CGG - chr2.2:2654856-2654875 None:intergenic 15.0%
!! ATATCTTAATTAAGTGTTTA+TGG - chr2.2:2654945-2654964 None:intergenic 15.0%
!! ATGAAAACAGATAAATAAAA+AGG - chr2.2:2654569-2654588 None:intergenic 15.0%
!! ATTAACAAAGCATAAAAAAT+AGG - chr2.2:2651771-2651790 None:intergenic 15.0%
!! AAAAAAGAGTAACTGAAAAT+AGG - chr2.2:2653662-2653681 None:intergenic 20.0%
!! AAAAAGAGTAACTGAAAATA+GGG - chr2.2:2653661-2653680 None:intergenic 20.0%
!! AAAAATAAGGAATGATATCA+CGG - chr2.2:2653204-2653223 None:intergenic 20.0%
!! AAAAGGAAATGAAAAAAACT+TGG + chr2.2:2653081-2653100 MS.gene36383:intron 20.0%
!! AAATAAACACTTGTAAGATT+GGG + chr2.2:2652751-2652770 MS.gene36383:intron 20.0%
!! AGTTAATTAAAGTGACAAAA+AGG - chr2.2:2653720-2653739 None:intergenic 20.0%
!! ATCATATTCAAATAATTGTG+CGG - chr2.2:2653885-2653904 None:intergenic 20.0%
!! TAAAGAAAGATTTAGAGATT+TGG + chr2.2:2652027-2652046 MS.gene36383:intron 20.0%
!! TAAATAAACACTTGTAAGAT+TGG + chr2.2:2652750-2652769 MS.gene36383:intron 20.0%
!! TAAGCTTATAAGAACAAAAT+TGG + chr2.2:2651278-2651297 MS.gene36383:CDS 20.0%
!!! AGGCATAGTTTTTTTTTAAA+AGG - chr2.2:2652996-2653015 None:intergenic 20.0%
!!! CATACATTAAGTAGATTTTA+CGG + chr2.2:2654213-2654232 MS.gene36383:intron 20.0%
!!! GTTTTTTTTTAAAAGGTGTA+AGG - chr2.2:2652989-2653008 None:intergenic 20.0%
!!! TTGAAATAAATTTGGAATGT+GGG + chr2.2:2652157-2652176 MS.gene36383:intron 20.0%
!!! TTGGTTTTCAATTTTAATCA+TGG + chr2.2:2651455-2651474 MS.gene36383:intron 20.0%
!!! TTTAATCATGGATTTTATCT+GGG + chr2.2:2651467-2651486 MS.gene36383:intron 20.0%
!!! TTTCCTTTTATGAATTATCT+TGG + chr2.2:2653152-2653171 MS.gene36383:intron 20.0%
!!! TTTGAAATAAATTTGGAATG+TGG + chr2.2:2652156-2652175 MS.gene36383:intron 20.0%
!!! TTTTAATCATGGATTTTATC+TGG + chr2.2:2651466-2651485 MS.gene36383:intron 20.0%
! AAAAAAAGTAGACCTGAATA+AGG - chr2.2:2651413-2651432 None:intergenic 25.0%
! AAAAGAGTAACTGAAAATAG+GGG - chr2.2:2653660-2653679 None:intergenic 25.0%
! AAATAAAAAGGCTTTGCAAA+AGG - chr2.2:2654557-2654576 None:intergenic 25.0%
! AACATAAATAACATCCTCAT+AGG + chr2.2:2653932-2653951 MS.gene36383:intron 25.0%
! AGAACAAAATTGGATGAATT+AGG + chr2.2:2651288-2651307 MS.gene36383:CDS 25.0%
! AGGAAAAAATAATAATAGGC+AGG - chr2.2:2653138-2653157 None:intergenic 25.0%
! ATGCAAAAATTGGCAAAAAA+AGG - chr2.2:2651550-2651569 None:intergenic 25.0%
! CAATTCCTAAATGCAAAAAT+TGG - chr2.2:2651560-2651579 None:intergenic 25.0%
! CATAATCAAGAAGATTGAAA+AGG + chr2.2:2653064-2653083 MS.gene36383:intron 25.0%
! GATTTAGAAAATCAGAAAAG+AGG - chr2.2:2654701-2654720 None:intergenic 25.0%
! TAGAGATTTGGATCAAAATA+TGG + chr2.2:2652039-2652058 MS.gene36383:intron 25.0%
! TATTGTAACTGAGATGTTAA+AGG - chr2.2:2652519-2652538 None:intergenic 25.0%
! TGAGATTGTAGATAATACTA+TGG - chr2.2:2653107-2653126 None:intergenic 25.0%
! TTAAGATATTTATCCAACCA+AGG + chr2.2:2654956-2654975 MS.gene36383:intron 25.0%
! TTATCACTGTGATTCTATAT+AGG + chr2.2:2654995-2655014 MS.gene36383:intron 25.0%
!! ATGAGGATGTTATTTATGTT+AGG - chr2.2:2653932-2653951 None:intergenic 25.0%
!! ATTGCAAACTAAGTTCTAAT+GGG - chr2.2:2653589-2653608 None:intergenic 25.0%
!! CAATTTTTGCATTTAGGAAT+TGG + chr2.2:2651558-2651577 MS.gene36383:intron 25.0%
!! TATTTCACTTGATAGTATCA+GGG + chr2.2:2654258-2654277 MS.gene36383:intron 25.0%
!! TCTTTCTTTATAGTTTTCCT+AGG - chr2.2:2652017-2652036 None:intergenic 25.0%
!! TGAAATAAATTTGGAATGTG+GGG + chr2.2:2652158-2652177 MS.gene36383:intron 25.0%
!! TGAATTGACTTATGTTTACA+AGG - chr2.2:2653016-2653035 None:intergenic 25.0%
!! TTATTTCACTTGATAGTATC+AGG + chr2.2:2654257-2654276 MS.gene36383:intron 25.0%
!! TTTTGCCAATTTTTGCATTT+AGG + chr2.2:2651552-2651571 MS.gene36383:intron 25.0%
!! TTTTGTTCTTATAAGCTTAC+TGG - chr2.2:2651277-2651296 None:intergenic 25.0%
!!! ATGACCAAATTTTGGAATTT+GGG + chr2.2:2654307-2654326 MS.gene36383:intron 25.0%
!!! CACTGCTTTTGAAATAAATT+TGG + chr2.2:2652149-2652168 MS.gene36383:intron 25.0%
!!! CATTCCTTATTTTTGGTATA+GGG + chr2.2:2653210-2653229 MS.gene36383:intron 25.0%
!!! GTGATATCATTCCTTATTTT+TGG + chr2.2:2653203-2653222 MS.gene36383:intron 25.0%
!!! TCATTCCTTATTTTTGGTAT+AGG + chr2.2:2653209-2653228 MS.gene36383:intron 25.0%
!!! TGCATTGATTACAGAAATTT+CGG + chr2.2:2654603-2654622 MS.gene36383:intron 25.0%
!!! TTCTTTAAAGCAGTAATAAG+CGG + chr2.2:2653405-2653424 MS.gene36383:CDS 25.0%
AAAAATGTTGAAAACCATGC+TGG + chr2.2:2653857-2653876 MS.gene36383:intron 30.0%
AAGCAATTGCAAAACTGTTT+GGG + chr2.2:2654778-2654797 MS.gene36383:intron 30.0%
AGGCCAAGATAATTCATAAA+AGG - chr2.2:2653158-2653177 None:intergenic 30.0%
ATCTACAAACATTACGATCT+TGG + chr2.2:2652413-2652432 MS.gene36383:intron 30.0%
CAAAGCATAAAAAATAGGAG+AGG - chr2.2:2651766-2651785 None:intergenic 30.0%
CACCTAAAGGTAAGTTATTT+AGG - chr2.2:2653344-2653363 None:intergenic 30.0%
GAGTATAGTCATATCATTAG+AGG + chr2.2:2651981-2652000 MS.gene36383:intron 30.0%
GTCAAACATGAATTCTGTTT+CGG + chr2.2:2652635-2652654 MS.gene36383:intron 30.0%
GTCCTAAATAACTTACCTTT+AGG + chr2.2:2653339-2653358 MS.gene36383:CDS 30.0%
TAAGCAATTGCAAAACTGTT+TGG + chr2.2:2654777-2654796 MS.gene36383:intron 30.0%
TAGCTTATATCAAAACAGTC+TGG + chr2.2:2652864-2652883 MS.gene36383:intron 30.0%
TCATTGATGTAGATTATCAC+TGG + chr2.2:2655031-2655050 MS.gene36383:intron 30.0%
TGAATATAATGGCTGTTTGA+GGG + chr2.2:2653832-2653851 MS.gene36383:intron 30.0%
TGGCTAAATCAAGAAACTTT+GGG - chr2.2:2651170-2651189 None:intergenic 30.0%
TTCCATCAACAAAATGTGTT+GGG + chr2.2:2654531-2654550 MS.gene36383:intron 30.0%
TTGAATATGATGAAAACCTG+AGG + chr2.2:2653894-2653913 MS.gene36383:intron 30.0%
TTGGCTAAATCAAGAAACTT+TGG - chr2.2:2651171-2651190 None:intergenic 30.0%
TTGTAAGCTAACAATCACAT+TGG - chr2.2:2653487-2653506 None:intergenic 30.0%
TTTATCTGGGTTTGATGAAA+AGG + chr2.2:2651480-2651499 MS.gene36383:intron 30.0%
TTTATGTTAGGCAACTATAG+AGG - chr2.2:2653920-2653939 None:intergenic 30.0%
TTTCCATCAACAAAATGTGT+TGG + chr2.2:2654530-2654549 MS.gene36383:intron 30.0%
! ACAATTTAAAACATTCCGGT+CGG + chr2.2:2652552-2652571 MS.gene36383:intron 30.0%
! CATTGCAAACTAAGTTCTAA+TGG - chr2.2:2653590-2653609 None:intergenic 30.0%
! GACCACAATTTAAAACATTC+CGG + chr2.2:2652548-2652567 MS.gene36383:intron 30.0%
! GCTAAGAAAATTTTAGATGC+TGG + chr2.2:2653279-2653298 MS.gene36383:CDS 30.0%
! TTAAAGTGACAAAAAGGTGT+CGG - chr2.2:2653714-2653733 None:intergenic 30.0%
! TTGATTGGATGGTTGATATA+AGG + chr2.2:2651205-2651224 MS.gene36383:CDS 30.0%
! TTGCATGCCTTTAACTTTAT+CGG - chr2.2:2655188-2655207 None:intergenic 30.0%
! TTTTTGCATTTAGGAATTGG+TGG + chr2.2:2651561-2651580 MS.gene36383:intron 30.0%
!! AACTGTTTTTCTCAAACCAA+AGG - chr2.2:2652221-2652240 None:intergenic 30.0%
!! ATCTTCGTTGACTTTGAAAT+AGG - chr2.2:2655323-2655342 None:intergenic 30.0%
!! GCATTGATTACAGAAATTTC+GGG + chr2.2:2654604-2654623 MS.gene36383:intron 30.0%
!! TAGAAAAGATGGTGGAAAAT+AGG + chr2.2:2651892-2651911 MS.gene36383:intron 30.0%
!! TCTTCGTTGACTTTGAAATA+GGG - chr2.2:2655322-2655341 None:intergenic 30.0%
!!! CAAATTTTGGAATTTGGGTT+GGG + chr2.2:2654312-2654331 MS.gene36383:intron 30.0%
!!! CATGACCAAATTTTGGAATT+TGG + chr2.2:2654306-2654325 MS.gene36383:intron 30.0%
!!! CTTATTTTTGGTATAGGGAA+CGG + chr2.2:2653215-2653234 MS.gene36383:intron 30.0%
AATAAGCTGAAAACAGCTTG+CGG - chr2.2:2652806-2652825 None:intergenic 35.0%
AATTCCTCATAACCAAGTTC+AGG - chr2.2:2651249-2651268 None:intergenic 35.0%
ACATTACGATCTTGGTGAAT+TGG + chr2.2:2652421-2652440 MS.gene36383:intron 35.0%
ACATTCTATAGACCCCATAT+TGG + chr2.2:2653455-2653474 MS.gene36383:CDS 35.0%
ACATTGGAAGTTGCCAATAT+GGG - chr2.2:2653471-2653490 None:intergenic 35.0%
ACCATCCAATCAAAAACTTC+AGG - chr2.2:2651198-2651217 None:intergenic 35.0%
ACCTATTGTAGAAAAGATGG+TGG + chr2.2:2651884-2651903 MS.gene36383:intron 35.0%
AGAAAGACTTCTCTTCTTCA+AGG - chr2.2:2655096-2655115 None:intergenic 35.0%
AGACTTTGCATTCTATCAAG+AGG + chr2.2:2655225-2655244 MS.gene36383:CDS 35.0%
AGCACCTATTGTAGAAAAGA+TGG + chr2.2:2651881-2651900 MS.gene36383:intron 35.0%
AGCTTTCGTTTGAAAAAGCT+CGG - chr2.2:2654034-2654053 None:intergenic 35.0%
AGTCATATCATTAGAGGCAA+AGG + chr2.2:2651987-2652006 MS.gene36383:intron 35.0%
ATCAAAAACTTCAGGCTCTT+TGG - chr2.2:2651190-2651209 None:intergenic 35.0%
ATCTTGGTGAATTGGTATAG+TGG + chr2.2:2652429-2652448 MS.gene36383:intron 35.0%
ATGAAAAAGAGTTACAGGTG+TGG + chr2.2:2651683-2651702 MS.gene36383:intron 35.0%
ATTCATGAGAATCCTGAACT+TGG + chr2.2:2651234-2651253 MS.gene36383:CDS 35.0%
CACTGTCTTGCTGAATATAA+TGG + chr2.2:2653821-2653840 MS.gene36383:intron 35.0%
CATCAAAGGACAAAAACAGA+AGG - chr2.2:2653178-2653197 None:intergenic 35.0%
CCAACCCAAATTCCAAAATT+TGG - chr2.2:2654314-2654333 None:intergenic 35.0%
CGTTCCCTATACCAAAAATA+AGG - chr2.2:2653217-2653236 None:intergenic 35.0%
CTCAGTTACAATAACAGTCT+TGG + chr2.2:2652526-2652545 MS.gene36383:intron 35.0%
CTGAATATAATGGCTGTTTG+AGG + chr2.2:2653831-2653850 MS.gene36383:intron 35.0%
CTGCAATTTATCTGCATGAT+TGG - chr2.2:2652393-2652412 None:intergenic 35.0%
CTTCTTACAACAAAATCCAC+AGG - chr2.2:2651948-2651967 None:intergenic 35.0%
GAAAATGTCTCTGCCATATT+TGG + chr2.2:2653309-2653328 MS.gene36383:CDS 35.0%
GCAAATAGACGCATAAACTT+TGG + chr2.2:2654646-2654665 MS.gene36383:intron 35.0%
GGAAAATCGTAGAATGAATC+CGG + chr2.2:2652450-2652469 MS.gene36383:intron 35.0%
GGCAAAAAAAGGATTGAACT+TGG - chr2.2:2651539-2651558 None:intergenic 35.0%
GTCTATAGAATGTTGAGGAA+TGG - chr2.2:2653448-2653467 None:intergenic 35.0%
GTTAATGTACTTGACGAGAT+AGG + chr2.2:2651785-2651804 MS.gene36383:intron 35.0%
TAACTTACCTTTAGGTGAAG+TGG + chr2.2:2653347-2653366 MS.gene36383:CDS 35.0%
TAGGACATGCAATCCAAATA+TGG - chr2.2:2653325-2653344 None:intergenic 35.0%
TCTGTTTACATAAGCTATCC+AGG - chr2.2:2652841-2652860 None:intergenic 35.0%
TGATAAGTGGTCATTTGAAG+TGG - chr2.2:2651145-2651164 None:intergenic 35.0%
TGCTTCAAACAATGATGAGT+TGG - chr2.2:2653762-2653781 None:intergenic 35.0%
TTATCTTGTCTCTTAGAGTC+TGG + chr2.2:2654721-2654740 MS.gene36383:intron 35.0%
TTATGTTGAAAGAAGACCTG+TGG + chr2.2:2651929-2651948 MS.gene36383:intron 35.0%
TTGACTGTAGCAATGATTCA+AGG + chr2.2:2653957-2653976 MS.gene36383:CDS 35.0%
! AAGAGCCTGAAGTTTTTGAT+TGG + chr2.2:2651190-2651209 MS.gene36383:CDS 35.0%
! AATAAATTTGGAATGTGGGG+AGG + chr2.2:2652161-2652180 MS.gene36383:intron 35.0%
! ATTGGATGGTTGATATAAGG+AGG + chr2.2:2651208-2651227 MS.gene36383:CDS 35.0%
! CACTTTGCATGACCAAATTT+TGG + chr2.2:2654299-2654318 MS.gene36383:intron 35.0%
! GATTGACTTAGCTTATCTAC+TGG + chr2.2:2652725-2652744 MS.gene36383:intron 35.0%
! GTTATTGGTTACATAGGAAC+TGG + chr2.2:2651345-2651364 MS.gene36383:CDS 35.0%
! TCCACCATCTTTTCTACAAT+AGG - chr2.2:2651888-2651907 None:intergenic 35.0%
! TTCATGCATCATTAGCTTCT+AGG + chr2.2:2655365-2655384 MS.gene36383:CDS 35.0%
! TTCGGGAACTAAGTTCTTTT+GGG + chr2.2:2654621-2654640 MS.gene36383:intron 35.0%
! TTTCGGGAACTAAGTTCTTT+TGG + chr2.2:2654620-2654639 MS.gene36383:intron 35.0%
!! ACAGGTGTTATTGGTTACAT+AGG + chr2.2:2651339-2651358 MS.gene36383:CDS 35.0%
!! ACTTGGTTGTTGTTGTTTGT+TGG + chr2.2:2652123-2652142 MS.gene36383:intron 35.0%
!! CTTGGTTGTTGTTGTTTGTT+GGG + chr2.2:2652124-2652143 MS.gene36383:intron 35.0%
!! GAAACTTTGGGATTGATAAG+TGG - chr2.2:2651158-2651177 None:intergenic 35.0%
!! GACCGGAATGTTTTAAATTG+TGG - chr2.2:2652553-2652572 None:intergenic 35.0%
!! TTTTTAAAAGGTGTAAGGCC+TGG - chr2.2:2652984-2653003 None:intergenic 35.0%
!!! CCAAATTTTGGAATTTGGGT+TGG + chr2.2:2654311-2654330 MS.gene36383:intron 35.0%
!!! CTTCTGTTTTTGTCCTTTGA+TGG + chr2.2:2653176-2653195 MS.gene36383:intron 35.0%
!!! TACTATTTTCAAAGTGTCGC+CGG + chr2.2:2655148-2655167 MS.gene36383:CDS 35.0%
AAACATTCAGTTGCAGTGAC+AGG + chr2.2:2651321-2651340 MS.gene36383:CDS 40.0%
AACAATAACACGCATGACCT+TGG + chr2.2:2652185-2652204 MS.gene36383:intron 40.0%
AACGAAGATGCACTTCCTTA+CGG + chr2.2:2655334-2655353 MS.gene36383:CDS 40.0%
AAGAATCTGAGGGATTGCTT+TGG - chr2.2:2653632-2653651 None:intergenic 40.0%
AAGCCACCATTGTTTACAGT+TGG - chr2.2:2655124-2655143 None:intergenic 40.0%
AAGCCATTGCCTGCAAATAT+AGG - chr2.2:2653387-2653406 None:intergenic 40.0%
AAGTCTTCTGATCCCATCAT+CGG - chr2.2:2655211-2655230 None:intergenic 40.0%
AATCCCTAACCGACTAATTG+TGG - chr2.2:2654491-2654510 None:intergenic 40.0%
AATCTAAGCAGACCCAAAGT+TGG - chr2.2:2652709-2652728 None:intergenic 40.0%
ACCTAACTGCCACAATTAGT+CGG + chr2.2:2654479-2654498 MS.gene36383:intron 40.0%
ACTGTAGCAATGATTCAAGG+AGG + chr2.2:2653960-2653979 MS.gene36383:CDS 40.0%
AGATGTTTACCTGAGAGTCA+AGG - chr2.2:2653536-2653555 None:intergenic 40.0%
AGTCATGTCTCTAGACAATG+TGG + chr2.2:2654393-2654412 MS.gene36383:intron 40.0%
ATAAACTTTGGCCAGGGAAA+TGG + chr2.2:2654658-2654677 MS.gene36383:intron 40.0%
ATACATATTCCTCCTCGGAA+TGG + chr2.2:2655258-2655277 MS.gene36383:CDS 40.0%
ATGGGGTCTATAGAATGTTG+AGG - chr2.2:2653453-2653472 None:intergenic 40.0%
ATGTTTACCTGAGAGTCAAG+GGG - chr2.2:2653534-2653553 None:intergenic 40.0%
ATTCCAGACTCTGTCACAAT+TGG + chr2.2:2653999-2654018 MS.gene36383:CDS 40.0%
CAACCAAGTATTATCCCACT+AGG - chr2.2:2652112-2652131 None:intergenic 40.0%
CACATTGGAAGTTGCCAATA+TGG - chr2.2:2653472-2653491 None:intergenic 40.0%
CACCATTGTTTACAGTTGGA+GGG - chr2.2:2655120-2655139 None:intergenic 40.0%
CATTGGAAGTTGCCAATATG+GGG - chr2.2:2653470-2653489 None:intergenic 40.0%
CATTTAGGAATTGGTGGAGT+GGG + chr2.2:2651567-2651586 MS.gene36383:intron 40.0%
CTTATTTCCATAAGCTCTCC+TGG + chr2.2:2652820-2652839 MS.gene36383:intron 40.0%
GAATCCTGAACTTGGTTATG+AGG + chr2.2:2651242-2651261 MS.gene36383:CDS 40.0%
GATGTTTACCTGAGAGTCAA+GGG - chr2.2:2653535-2653554 None:intergenic 40.0%
GCAGCATGAAAAAGAGTTAC+AGG + chr2.2:2651678-2651697 MS.gene36383:CDS 40.0%
GTATCTGCTCAAATTGCATC+AGG + chr2.2:2655387-2655406 MS.gene36383:CDS 40.0%
GTCATGTCTCTAGACAATGT+GGG + chr2.2:2654394-2654413 MS.gene36383:intron 40.0%
GTGATTCTATATAGGCGCTA+AGG + chr2.2:2655003-2655022 MS.gene36383:intron 40.0%
TAAACTTTGGCCAGGGAAAT+GGG + chr2.2:2654659-2654678 MS.gene36383:intron 40.0%
TAAAGCAGTAATAAGCGGCA+GGG + chr2.2:2653410-2653429 MS.gene36383:CDS 40.0%
TATGGATGCTCTCCTTATTC+AGG + chr2.2:2651398-2651417 MS.gene36383:CDS 40.0%
TCATTTGTGTTGGGTGTGAA+GGG - chr2.2:2654433-2654452 None:intergenic 40.0%
TGATATCACGGATCCATCAA+AGG - chr2.2:2653192-2653211 None:intergenic 40.0%
TGCTACAGTCAAAACCTATG+AGG - chr2.2:2653949-2653968 None:intergenic 40.0%
TGTTGCTCTTAGAGCTGATA+TGG + chr2.2:2651380-2651399 MS.gene36383:CDS 40.0%
TTAAAGCAGTAATAAGCGGC+AGG + chr2.2:2653409-2653428 MS.gene36383:CDS 40.0%
TTAGGGATTGACCGCAATTA+TGG + chr2.2:2654502-2654521 MS.gene36383:intron 40.0%
TTCACACCCAACACAAATGA+AGG + chr2.2:2654433-2654452 MS.gene36383:intron 40.0%
TTCATTTGTGTTGGGTGTGA+AGG - chr2.2:2654434-2654453 None:intergenic 40.0%
TTCCCTCCAACTGTAAACAA+TGG + chr2.2:2655115-2655134 MS.gene36383:CDS 40.0%
! ACCTTACAAACTGGTTTCGT+AGG - chr2.2:2654349-2654368 None:intergenic 40.0%
! ACTAAGTTCTAATGGGTGGT+TGG - chr2.2:2653582-2653601 None:intergenic 40.0%
! ACTATAAGAAGAGCACACCT+TGG - chr2.2:2654976-2654995 None:intergenic 40.0%
! CCTTACAAACTGGTTTCGTA+GGG - chr2.2:2654348-2654367 None:intergenic 40.0%
! GAGCATAAGAGTAAAGTACC+TGG + chr2.2:2651589-2651608 MS.gene36383:CDS 40.0%
! GCAAACTAAGTTCTAATGGG+TGG - chr2.2:2653586-2653605 None:intergenic 40.0%
! TCGGGAACTAAGTTCTTTTG+GGG + chr2.2:2654622-2654641 MS.gene36383:intron 40.0%
! TTCTAATGGGTGGTTGGAAA+GGG - chr2.2:2653576-2653595 None:intergenic 40.0%
! TTTAAAACATTCCGGTCGGA+CGG + chr2.2:2652556-2652575 MS.gene36383:intron 40.0%
!! ACTCTTTTTCATGCTGCTTG+AGG - chr2.2:2651675-2651694 None:intergenic 40.0%
!! AGATGGTGGAAAATAGGCTT+AGG + chr2.2:2651898-2651917 MS.gene36383:intron 40.0%
!! AGGGATTGCTTTGGAAATGA+CGG - chr2.2:2653623-2653642 None:intergenic 40.0%
!! GCCTGAAGTTTTTGATTGGA+TGG + chr2.2:2651194-2651213 MS.gene36383:CDS 40.0%
!! GTTTTTCAACCAGCAGAAGA+AGG + chr2.2:2653246-2653265 MS.gene36383:CDS 40.0%
!! TCAGCTCTAAGAGCAACAAA+AGG - chr2.2:2651378-2651397 None:intergenic 40.0%
!! TGTAAGATTGGGAGTGCTTA+TGG + chr2.2:2652762-2652781 MS.gene36383:intron 40.0%
!!! ACTATTTTCAAAGTGTCGCC+GGG + chr2.2:2655149-2655168 MS.gene36383:CDS 40.0%
!!! GTTCTTTTGAGACTTCTGCT+TGG + chr2.2:2653793-2653812 MS.gene36383:intron 40.0%
AAACTTTGGCCAGGGAAATG+GGG + chr2.2:2654660-2654679 MS.gene36383:intron 45.0%
AAAGCAGTAATAAGCGGCAG+GGG + chr2.2:2653411-2653430 MS.gene36383:CDS 45.0%
AAGCTATCCAGGAGAGCTTA+TGG - chr2.2:2652830-2652849 None:intergenic 45.0%
ACCGACTAATTGTGGCAGTT+AGG - chr2.2:2654483-2654502 None:intergenic 45.0%
ACTGCCACAATTAGTCGGTT+AGG + chr2.2:2654484-2654503 MS.gene36383:intron 45.0%
AGACGCATAAACTTTGGCCA+GGG + chr2.2:2654652-2654671 MS.gene36383:intron 45.0%
AGATGACACCATCAGAGAGT+TGG + chr2.2:2651855-2651874 MS.gene36383:intron 45.0%
AGGATGTTGTCTTGGATGTG+TGG + chr2.2:2651805-2651824 MS.gene36383:intron 45.0%
AGGGGAAGTCAAGAATCTGA+GGG - chr2.2:2653642-2653661 None:intergenic 45.0%
AGGTCTGGTCCTATATTTGC+AGG + chr2.2:2653375-2653394 MS.gene36383:CDS 45.0%
AGTGCTCGTTATGCCAACTT+TGG + chr2.2:2652693-2652712 MS.gene36383:intron 45.0%
ATGACACCATCAGAGAGTTG+GGG + chr2.2:2651857-2651876 MS.gene36383:intron 45.0%
CATAACAGACCTGCTCAATG+CGG - chr2.2:2654073-2654092 None:intergenic 45.0%
CCAAGTATTATCCCACTAGG+TGG - chr2.2:2652109-2652128 None:intergenic 45.0%
CCACCATTGTTTACAGTTGG+AGG - chr2.2:2655121-2655140 None:intergenic 45.0%
CCACCTAGTGGGATAATACT+TGG + chr2.2:2652106-2652125 MS.gene36383:intron 45.0%
CCAGCACCTTCATTTGTGTT+GGG - chr2.2:2654442-2654461 None:intergenic 45.0%
CCCTACGAAACCAGTTTGTA+AGG + chr2.2:2654345-2654364 MS.gene36383:intron 45.0%
CCTCCAACTGTAAACAATGG+TGG + chr2.2:2655118-2655137 MS.gene36383:CDS 45.0%
CCTGGATACATATTCCTCCT+CGG + chr2.2:2655253-2655272 MS.gene36383:CDS 45.0%
CGATATTTCCCCACTACTAC+CGG - chr2.2:2655418-2655437 None:intergenic 45.0%
CTAGAAGCCACTTCACCTAA+AGG - chr2.2:2653357-2653376 None:intergenic 45.0%
CTCAGTTGAACATCTTCCGT+CGG + chr2.2:2655288-2655307 MS.gene36383:CDS 45.0%
CTGCCACAATTAGTCGGTTA+GGG + chr2.2:2654485-2654504 MS.gene36383:intron 45.0%
CTTGTCTCTTAGAGTCTGGT+TGG + chr2.2:2654725-2654744 MS.gene36383:intron 45.0%
CTTTAGGTGAAGTGGCTTCT+AGG + chr2.2:2653355-2653374 MS.gene36383:CDS 45.0%
GACGAGATAGGATGTTGTCT+TGG + chr2.2:2651797-2651816 MS.gene36383:intron 45.0%
GATGACACCATCAGAGAGTT+GGG + chr2.2:2651856-2651875 MS.gene36383:intron 45.0%
GCAAGCTTCACCTTACAAAC+TGG - chr2.2:2654358-2654377 None:intergenic 45.0%
GCATTTAGGAATTGGTGGAG+TGG + chr2.2:2651566-2651585 MS.gene36383:intron 45.0%
GCTCATGTTGCTATGCTTCT+TGG + chr2.2:2651637-2651656 MS.gene36383:CDS 45.0%
GCTGTTTATCAGTCCAAACC+AGG + chr2.2:2652963-2652982 MS.gene36383:intron 45.0%
GGTCCTATATTTGCAGGCAA+TGG + chr2.2:2653381-2653400 MS.gene36383:CDS 45.0%
GTAGCAATGATTCAAGGAGG+TGG + chr2.2:2653963-2653982 MS.gene36383:CDS 45.0%
GTGCTCGTTATGCCAACTTT+GGG + chr2.2:2652694-2652713 MS.gene36383:intron 45.0%
TAGACGCATAAACTTTGGCC+AGG + chr2.2:2654651-2654670 MS.gene36383:intron 45.0%
TAGGGGAAGTCAAGAATCTG+AGG - chr2.2:2653643-2653662 None:intergenic 45.0%
TCAGTTGAACATCTTCCGTC+GGG + chr2.2:2655289-2655308 MS.gene36383:CDS 45.0%
TCCAGCACCTTCATTTGTGT+TGG - chr2.2:2654443-2654462 None:intergenic 45.0%
TCTGCTCAAATTGCATCAGG+AGG + chr2.2:2655390-2655409 MS.gene36383:CDS 45.0%
TGGAAATCCCGCCATAATTG+CGG - chr2.2:2654516-2654535 None:intergenic 45.0%
TTAGAGGCAAAGGAAGTCCT+AGG + chr2.2:2651997-2652016 MS.gene36383:intron 45.0%
TTCTATCAAGAGGCTATGCC+TGG + chr2.2:2655235-2655254 MS.gene36383:CDS 45.0%
TTTCAACCAGCAGAAGAAGG+AGG + chr2.2:2653249-2653268 MS.gene36383:CDS 45.0%
! AAAAGGTGTAAGGCCTGGTT+TGG - chr2.2:2652979-2652998 None:intergenic 45.0%
! AAAGGCATGCAACCGATGAT+GGG + chr2.2:2655196-2655215 MS.gene36383:CDS 45.0%
! ATGTAATCGACTCCACCTAG+TGG + chr2.2:2652094-2652113 MS.gene36383:intron 45.0%
! CAAATTGCATCAGGAGGTAC+CGG + chr2.2:2655396-2655415 MS.gene36383:CDS 45.0%
! CAGTTGGGTTGCTATAGTTG+CGG + chr2.2:2652481-2652500 MS.gene36383:intron 45.0%
! GGCCCAACACATTTTGTTGA+TGG - chr2.2:2654536-2654555 None:intergenic 45.0%
! GTGGTCATTTGAAGTGGAAG+AGG - chr2.2:2651139-2651158 None:intergenic 45.0%
! GTTCTAATGGGTGGTTGGAA+AGG - chr2.2:2653577-2653596 None:intergenic 45.0%
! GTTGCAGTGACAGGTGTTAT+TGG + chr2.2:2651330-2651349 MS.gene36383:CDS 45.0%
! TAAAGGCATGCAACCGATGA+TGG + chr2.2:2655195-2655214 MS.gene36383:CDS 45.0%
! TAAGAAGAGCACACCTTGGT+TGG - chr2.2:2654972-2654991 None:intergenic 45.0%
! TGTAATCGACTCCACCTAGT+GGG + chr2.2:2652095-2652114 MS.gene36383:intron 45.0%
!! CTTGGCGCCGATAAAGTTAA+AGG + chr2.2:2655178-2655197 MS.gene36383:CDS 45.0%
!! GCTCTAAGAGCAACAAAAGG+AGG - chr2.2:2651375-2651394 None:intergenic 45.0%
!!! CTTTTGAGACTTCTGCTTGG+AGG + chr2.2:2653796-2653815 MS.gene36383:intron 45.0%
!!! TATTTTTAATTTTATGATTT+TGG + chr2.2:2651436-2651455 MS.gene36383:intron 5.0%
AAAGTGCATAACCGTCCGAC+CGG - chr2.2:2652570-2652589 None:intergenic 50.0%
AAATAGGGTGAGTGTCCCGA+CGG - chr2.2:2655307-2655326 None:intergenic 50.0%
AATCCGGCTGATGTGCAGTT+GGG + chr2.2:2652466-2652485 MS.gene36383:intron 50.0%
ACACGCATGACCTTGGATAG+AGG + chr2.2:2652192-2652211 MS.gene36383:intron 50.0%
AGAACTTGACCCCATTTCCC+TGG - chr2.2:2654672-2654691 None:intergenic 50.0%
AGACATCTTCCATTCCGAGG+AGG - chr2.2:2655270-2655289 None:intergenic 50.0%
CCAAAGGCAACCTCTATCCA+AGG - chr2.2:2652205-2652224 None:intergenic 50.0%
CCACATGCATGCATCTTTCC+AGG - chr2.2:2651610-2651629 None:intergenic 50.0%
CCACCAATTGTGACAGAGTC+TGG - chr2.2:2654005-2654024 None:intergenic 50.0%
CCAGACTCTGTCACAATTGG+TGG + chr2.2:2654002-2654021 MS.gene36383:CDS 50.0%
CCGAGGAGGAATATGTATCC+AGG - chr2.2:2655256-2655275 None:intergenic 50.0%
CCTGGAAAGATGCATGCATG+TGG + chr2.2:2651607-2651626 MS.gene36383:CDS 50.0%
CCTTGGATAGAGGTTGCCTT+TGG + chr2.2:2652202-2652221 MS.gene36383:intron 50.0%
CTGAGACATCTTCCATTCCG+AGG - chr2.2:2655273-2655292 None:intergenic 50.0%
GATTGATCCCCTTGACTCTC+AGG + chr2.2:2653524-2653543 MS.gene36383:CDS 50.0%
GGATTGACCGCAATTATGGC+GGG + chr2.2:2654506-2654525 MS.gene36383:intron 50.0%
GGGATTGACCGCAATTATGG+CGG + chr2.2:2654505-2654524 MS.gene36383:intron 50.0%
TAGGCAACTATAGAGGCCTC+AGG - chr2.2:2653913-2653932 None:intergenic 50.0%
! ATAATTGTGCGGTGCCAGCA+TGG - chr2.2:2653874-2653893 None:intergenic 50.0%
! CCCAACACAAATGAAGGTGC+TGG + chr2.2:2654439-2654458 MS.gene36383:intron 50.0%
! GTCGGACGGTTATGCACTTT+TGG + chr2.2:2652570-2652589 MS.gene36383:intron 50.0%
ACTGAGACACCGCATTGAGC+AGG + chr2.2:2654061-2654080 MS.gene36383:CDS 55.0%
AGCAGAAGAAGGAGGTGGTG+GGG + chr2.2:2653257-2653276 MS.gene36383:CDS 55.0%
CAACCAGCAGAAGAAGGAGG+TGG + chr2.2:2653252-2653271 MS.gene36383:CDS 55.0%
CAACCCAACTGCACATCAGC+CGG - chr2.2:2652472-2652491 None:intergenic 55.0%
CAGCAGAAGAAGGAGGTGGT+GGG + chr2.2:2653256-2653275 MS.gene36383:CDS 55.0%
GAATCCGGCTGATGTGCAGT+TGG + chr2.2:2652465-2652484 MS.gene36383:intron 55.0%
GGTGAAGTGGCTTCTAGGTC+TGG + chr2.2:2653360-2653379 MS.gene36383:CDS 55.0%
GTGCTACCCCAACTCTCTGA+TGG - chr2.2:2651866-2651885 None:intergenic 55.0%
GTGTTGGGTGTGAAGGGTTG+TGG - chr2.2:2654427-2654446 None:intergenic 55.0%
!! AGGAGGTACCGGTAGTAGTG+GGG + chr2.2:2655407-2655426 MS.gene36383:CDS 55.0%
!! CAGGAGGTACCGGTAGTAGT+GGG + chr2.2:2655406-2655425 MS.gene36383:CDS 55.0%
!! TCAGGAGGTACCGGTAGTAG+TGG + chr2.2:2655405-2655424 MS.gene36383:CDS 55.0%
ATCGGCGCCAAGCAAACTCC+CGG - chr2.2:2655170-2655189 None:intergenic 60.0%
CCACCACCTCCTTCTTCTGC+TGG - chr2.2:2653258-2653277 None:intergenic 60.0%
CCAGCAGAAGAAGGAGGTGG+TGG + chr2.2:2653255-2653274 MS.gene36383:CDS 60.0%
GCAGTAATAAGCGGCAGGGG+AGG + chr2.2:2653414-2653433 MS.gene36383:CDS 60.0%
GCATGAAGTGCAGCGCCGTA+AGG - chr2.2:2655352-2655371 None:intergenic 60.0%
! AGTGTCGCCGGGAGTTTGCT+TGG + chr2.2:2655160-2655179 MS.gene36383:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 2651078 2655450 2651078 ID=MS.gene36383
chr2.2 mRNA 2651078 2655450 2651078 ID=MS.gene36383.t1;Parent=MS.gene36383
chr2.2 exon 2651078 2651419 2651078 ID=MS.gene36383.t1.exon1;Parent=MS.gene36383.t1
chr2.2 CDS 2651078 2651419 2651078 ID=cds.MS.gene36383.t1;Parent=MS.gene36383.t1
chr2.2 exon 2651574 2651699 2651574 ID=MS.gene36383.t1.exon2;Parent=MS.gene36383.t1
chr2.2 CDS 2651574 2651699 2651574 ID=cds.MS.gene36383.t1;Parent=MS.gene36383.t1
chr2.2 exon 2653231 2653545 2653231 ID=MS.gene36383.t1.exon3;Parent=MS.gene36383.t1
chr2.2 CDS 2653231 2653545 2653231 ID=cds.MS.gene36383.t1;Parent=MS.gene36383.t1
chr2.2 exon 2653954 2654082 2653954 ID=MS.gene36383.t1.exon4;Parent=MS.gene36383.t1
chr2.2 CDS 2653954 2654082 2653954 ID=cds.MS.gene36383.t1;Parent=MS.gene36383.t1
chr2.2 exon 2655043 2655450 2655043 ID=MS.gene36383.t1.exon5;Parent=MS.gene36383.t1
chr2.2 CDS 2655043 2655450 2655043 ID=cds.MS.gene36383.t1;Parent=MS.gene36383.t1
Gene Sequence

>MS.gene36383

ATGGGTTTCTTCAAATGGGTCATTTTCATTTTATCTGCAACATCAATCTTCTCAGATTCCTCTTCCACTTCAAATGACCACTTATCAATCCCAAAGTTTCTTGATTTAGCCAAAGAGCCTGAAGTTTTTGATTGGATGGTTGATATAAGGAGGAAGATTCATGAGAATCCTGAACTTGGTTATGAGGAATTTGAAACCAGTAAGCTTATAAGAACAAAATTGGATGAATTAGGTGTTCAATATAAACATTCAGTTGCAGTGACAGGTGTTATTGGTTACATAGGAACTGGTCTTCCTCCTTTTGTTGCTCTTAGAGCTGATATGGATGCTCTCCTTATTCAGGTCTACTTTTTTTATTTATTTTTAATTTTATGATTTTGGTTTTCAATTTTAATCATGGATTTTATCTGGGTTTGATGAAAAGGAAAAACAAAATGAAAAATGACATTTTTTAAACTCCAAGTTCAATCCTTTTTTTGCCAATTTTTGCATTTAGGAATTGGTGGAGTGGGAGCATAAGAGTAAAGTACCTGGAAAGATGCATGCATGTGGTCATGATGCTCATGTTGCTATGCTTCTTGGTGCTGCAAAGATCCTCAAGCAGCATGAAAAAGAGTTACAGGTGTGGTTTTTCACTTCTTCATTTATTTACATTTATTCATGTTCATTCTTCTTAATACATGATCCTCTCCTATTTTTTATGCTTTGTTAATGTACTTGACGAGATAGGATGTTGTCTTGGATGTGTGGTAGTAAGACTAAACGAGATGTGATTAGAGATGACACCATCAGAGAGTTGGGGTAGCACCTATTGTAGAAAAGATGGTGGAAAATAGGCTTAGGTGATTTGATTATGTTGAAAGAAGACCTGTGGATTTTGTTGTAAGAAGAGTAGATCAAGTAGAGTATAGTCATATCATTAGAGGCAAAGGAAGTCCTAGGAAAACTATAAAGAAAGATTTAGAGATTTGGATCAAAATATGGTTTTGATAAAACATCATGACGTAATTTTGTCTATGTAATCGACTCCACCTAGTGGGATAATACTTGGTTGTTGTTGTTTGTTGGGCACACTGCTTTTGAAATAAATTTGGAATGTGGGGAGGTAACAATAACACGCATGACCTTGGATAGAGGTTGCCTTTGGTTTGAGAAAAACAGTTTCTTTCTATCTGCATTTTTAGTTTATATTTTCAATTACATAAATCATCTTGTTTTTTTTTTTTTTTTTTTTACTTCACTTTTTTATTTTCAGTTACTTGTGTAGATAAATTAAAAACAAATAAAGTACAAATGGTGTGTTGTATTGAAACCAATCATGCAGATAAATTGCAGATCTACAAACATTACGATCTTGGTGAATTGGTATAGTGGAAAATCGTAGAATGAATCCGGCTGATGTGCAGTTGGGTTGCTATAGTTGCGGCAATTTTTGAAACCTTTAACATCTCAGTTACAATAACAGTCTTGGACCACAATTTAAAACATTCCGGTCGGACGGTTATGCACTTTTGGTGTTTAAGATGTTTCTGTGTTTTTAATTCAAATTATGTCAAAGTCAAACATGAATTCTGTTTCGGATGTCTGTATACTAGCAAACTGATGTCAAATTTTGAGTGCTCGTTATGCCAACTTTGGGTCTGCTTAGATTGACTTAGCTTATCTACTGGTGTAAATAAACACTTGTAAGATTGGGAGTGCTTATGGAAACAGCTTATGACATGTCCGCAAGCTGTTTTCAGCTTATTTCCATAAGCTCTCCTGGATAGCTTATGTAAACAGATTATAGCTTATATCAAAACAGTCTGGCTTTATTATTTTTATCATATATAGAAATATCTTATATAGAAGCGCTTACATGATAAGCATATAAATGTTTAATTAAGCTGTTTATCAGTCCAAACCAGGCCTTACACCTTTTAAAAAAAAACTATGCCTTGTAAACATAAGTCAATTCATCAATTATTGTTGTAATTCTAACAAAAGCATAATCAAGAAGATTGAAAAGGAAATGAAAAAAACTTGGCCATAGTATTATCTACAATCTCAAATTGACTCCTGCCTATTATTATTTTTTCCTTTTATGAATTATCTTGGCCTTCTGTTTTTGTCCTTTGATGGATCCGTGATATCATTCCTTATTTTTGGTATAGGGAACGGTTGTTCTTGTTTTTCAACCAGCAGAAGAAGGAGGTGGTGGGGCTAAGAAAATTTTAGATGCTGGAGTCTTAGAAAATGTCTCTGCCATATTTGGATTGCATGTCCTAAATAACTTACCTTTAGGTGAAGTGGCTTCTAGGTCTGGTCCTATATTTGCAGGCAATGGCTTCTTTAAAGCAGTAATAAGCGGCAGGGGAGGTCATGCAGCCATTCCTCAACATTCTATAGACCCCATATTGGCAACTTCCAATGTGATTGTTAGCTTACAACAAATTGTTTCTCGTGAGATTGATCCCCTTGACTCTCAGGTAAACATCTTATTTCATTTATTACTTCCCTTTCCAACCACCCATTAGAACTTAGTTTGCAATGTTCTTTGAATCCGTCATTTCCAAAGCAATCCCTCAGATTCTTGACTTCCCCTATTTTCAGTTACTCTTTTTTGTTATCTACTTTTAGTTTTAGAAGTTTCACCGACACCTTTTTGTCACTTTAATTAACTTGAGAACGCGTGCTTGTTACCAACTCATCATTGTTTGAAGCATTAAAAGCTTTGTTCTTTTGAGACTTCTGCTTGGAGGTACACTGTCTTGCTGAATATAATGGCTGTTTGAGGGAAAAAAATGTTGAAAACCATGCTGGCACCGCACAATTATTTGAATATGATGAAAACCTGAGGCCTCTATAGTTGCCTAACATAAATAACATCCTCATAGGTTTTGACTGTAGCAATGATTCAAGGAGGTGGTGCATTCAATGTTATTCCAGACTCTGTCACAATTGGTGGCACTTTCCGAGCTTTTTCAAACGAAAGCTTCACGCAACTGAGACACCGCATTGAGCAGGTCTGTTATGAAGAAGAATAGATTTATTTTGTGCTTTAAATAGAAATAATTAGCTCTATTTTTTTTATTTTTTTATGTTCATTAGTAGTGTGTTTTATTCTTATTTGTTTCTATACAAATTGTTAAACAACATACATTAAGTAGATTTTACGGATTTGAATAAAAAAATAAATATTATTTCACTTGATAGTATCAGGGAAGAGAGATAGACACGTTCACTTTGCATGACCAAATTTTGGAATTTGGGTTGGGTTTAACTCAACCCTACGAAACCAGTTTGTAAGGTGAAGCTTGCACAATTTTTAAGCACAGTCATGTCTCTAGACAATGTGGGACTAAATCCACAACCCTTCACACCCAACACAAATGAAGGTGCTGGAGAATGCAATGAAGACAACCTAACTGCCACAATTAGTCGGTTAGGGATTGACCGCAATTATGGCGGGATTTCCATCAACAAAATGTGTTGGGCCTTTTGCAAAGCCTTTTTATTTATCTGTTTTCATGTGACTTAAAAACTTGCATTGATTACAGAAATTTCGGGAACTAAGTTCTTTTGGGGCGCAAATAGACGCATAAACTTTGGCCAGGGAAATGGGGTCAAGTTCTATGAGACCTCTTTTCTGATTTTCTAAATCTTATCTTGTCTCTTAGAGTCTGGTTGGATTGATTTATATGAGCTCATCTCTTGACATAAGCAATTGCAAAACTGTTTGGGATGAAAATAACTTATGAAATGTCTACAAGCTCTTCAAAATAGCTTATGAAAACCGTTTATAGCTTATACAATTTTGACTTCATCTTATTTTTTGTTATTAAAATAGTTTATGCATAAGCATTTTTGTGATGAGCGTTTATGCCATAAACACTTAATTAAGATATTTATCCAACCAAGGTGTGCTCTTCTTATAGTTATCACTGTGATTCTATATAGGCGCTAAGGTTGTTTCATTGATGTAGATTATCACTGGACAAGCTGCTGTGCAGAGATGCCATGCAACAGTCAGCTTCCTTGAAGAAGAGAAGTCTTTCTTCCCTCCAACTGTAAACAATGGTGGCTTGCATTACTATTTTCAAAGTGTCGCCGGGAGTTTGCTTGGCGCCGATAAAGTTAAAGGCATGCAACCGATGATGGGATCAGAAGACTTTGCATTCTATCAAGAGGCTATGCCTGGATACATATTCCTCCTCGGAATGGAAGATGTCTCAGTTGAACATCTTCCGTCGGGACACTCACCCTATTTCAAAGTCAACGAAGATGCACTTCCTTACGGCGCTGCACTTCATGCATCATTAGCTTCTAGGTATCTGCTCAAATTGCATCAGGAGGTACCGGTAGTAGTGGGGAAATATCGTGATGAATTATAG
Protein sequence

>MS.gene36383.t1

MGFFKWVIFILSATSIFSDSSSTSNDHLSIPKFLDLAKEPEVFDWMVDIRRKIHENPELGYEEFETSKLIRTKLDELGVQYKHSVAVTGVIGYIGTGLPPFVALRADMDALLIQELVEWEHKSKVPGKMHACGHDAHVAMLLGAAKILKQHEKELQGTVVLVFQPAEEGGGGAKKILDAGVLENVSAIFGLHVLNNLPLGEVASRSGPIFAGNGFFKAVISGRGGHAAIPQHSIDPILATSNVIVSLQQIVSREIDPLDSQVLTVAMIQGGGAFNVIPDSVTIGGTFRAFSNESFTQLRHRIEQIITGQAAVQRCHATVSFLEEEKSFFPPTVNNGGLHYYFQSVAGSLLGADKVKGMQPMMGSEDFAFYQEAMPGYIFLLGMEDVSVEHLPSGHSPYFKVNEDALPYGAALHASLASRYLLKLHQEVPVVVGKYRDEL