AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92551


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92551.t1 MTR_4g019880 97.802 364 8 0 1 364 7 370 0.0 735
MS.gene92551.t1 MTR_7g116500 76.177 361 84 1 4 364 11 369 0.0 580
MS.gene92551.t1 MTR_7g116520 69.863 365 103 2 3 362 6 368 0.0 522
MS.gene92551.t1 MTR_7g116510 68.802 359 108 3 7 364 7 362 0.0 514
MS.gene92551.t1 MTR_1g024890 69.706 340 101 1 25 364 31 368 0.0 511
MS.gene92551.t1 MTR_6g021530 67.867 361 111 3 7 364 8 366 0.0 506
MS.gene92551.t1 MTR_7g116570 65.854 369 115 3 5 364 4 370 1.31e-178 500
MS.gene92551.t1 MTR_1g079540 65.027 366 119 3 6 364 4 367 1.47e-176 495
MS.gene92551.t1 MTR_1g069175 61.773 361 134 3 4 362 11 369 1.85e-166 469
MS.gene92551.t1 MTR_7g008060 62.222 360 119 3 7 364 12 356 2.49e-163 461
MS.gene92551.t1 MTR_1g079530 62.810 363 122 4 3 362 5 357 8.33e-162 457
MS.gene92551.t1 MTR_1g079590 62.000 200 70 1 7 200 6 205 6.63e-84 254
MS.gene92551.t1 MTR_5g078210 38.889 342 201 7 4 343 3 338 1.25e-78 245
MS.gene92551.t1 MTR_4g122200 37.853 354 212 6 7 357 17 365 3.23e-74 234
MS.gene92551.t1 MTR_8g079050 36.512 367 219 9 2 357 10 373 1.31e-73 233
MS.gene92551.t1 MTR_2g033930 36.639 363 219 7 1 358 5 361 4.16e-73 231
MS.gene92551.t1 MTR_3g098270 37.092 337 197 6 26 354 34 363 5.71e-70 224
MS.gene92551.t1 MTR_2g033920 36.578 339 208 5 23 358 32 366 2.39e-69 222
MS.gene92551.t1 MTR_4g035353 32.687 361 237 4 1 360 8 363 3.09e-69 221
MS.gene92551.t1 MTR_8g087890 36.134 357 219 7 8 360 12 363 4.09e-69 221
MS.gene92551.t1 MTR_3g005650 34.746 354 224 6 4 357 8 354 1.11e-67 217
MS.gene92551.t1 MTR_3g024510 37.572 346 202 8 1 337 6 346 1.14e-67 218
MS.gene92551.t1 MTR_5g084790 35.522 335 204 8 9 337 13 341 1.33e-67 217
MS.gene92551.t1 MTR_5g084750 35.503 338 201 7 9 334 4 336 8.61e-67 215
MS.gene92551.t1 MTR_0565s0010 35.734 361 216 9 7 360 14 365 2.38e-66 214
MS.gene92551.t1 MTR_3g082830 35.119 336 209 7 19 350 31 361 3.84e-66 213
MS.gene92551.t1 MTR_3g435540 36.593 317 195 5 28 342 25 337 5.75e-66 213
MS.gene92551.t1 MTR_3g464730 36.471 340 208 7 1 337 4 338 7.23e-66 212
MS.gene92551.t1 MTR_8g074570 34.877 367 214 9 6 357 13 369 1.81e-65 212
MS.gene92551.t1 MTR_5g093090 35.380 342 205 6 26 359 28 361 4.13e-65 211
MS.gene92551.t1 MTR_4g108690 37.224 317 193 5 28 342 29 341 6.22e-64 208
MS.gene92551.t1 MTR_5g084770 36.709 316 191 6 26 337 28 338 6.60e-64 207
MS.gene92551.t1 MTR_3g052490 33.978 362 224 8 7 360 12 366 7.20e-63 205
MS.gene92551.t1 MTR_3g052480 34.795 365 218 8 7 360 13 368 7.44e-63 205
MS.gene92551.t1 MTR_1g025760 34.375 352 210 7 1 338 46 390 8.50e-63 206
MS.gene92551.t1 MTR_5g009100 33.934 333 215 4 28 358 48 377 9.43e-62 202
MS.gene92551.t1 MTR_5g074270 34.161 322 201 7 26 342 33 348 2.00e-61 201
MS.gene92551.t1 MTR_1g025780 35.110 319 199 6 26 342 41 353 4.48e-61 200
MS.gene92551.t1 MTR_8g075230 34.286 350 207 8 9 340 8 352 1.70e-60 199
MS.gene92551.t1 MTR_3g005660 33.875 369 222 10 8 360 8 370 8.04e-59 194
MS.gene92551.t1 MTR_5g022640 35.127 316 196 7 26 337 43 353 9.98e-59 194
MS.gene92551.t1 MTR_3g052580 32.787 366 230 8 1 358 2 359 1.18e-58 195
MS.gene92551.t1 MTR_2g044100 33.425 365 217 9 12 361 25 378 1.45e-58 195
MS.gene92551.t1 MTR_3g052580 32.787 366 230 8 1 358 1 358 1.59e-58 195
MS.gene92551.t1 MTR_2g100620 34.472 322 200 7 26 342 31 346 3.80e-58 192
MS.gene92551.t1 MTR_1g025700 35.736 333 196 7 26 352 50 370 3.95e-58 193
MS.gene92551.t1 MTR_3g023220 35.224 335 199 9 26 358 33 351 2.45e-57 190
MS.gene92551.t1 MTR_8g075220 34.043 329 206 7 26 347 40 364 8.52e-57 189
MS.gene92551.t1 MTR_5g078210 37.282 287 173 6 4 288 3 284 9.13e-57 188
MS.gene92551.t1 MTR_8g014910 33.819 343 214 9 7 342 11 347 9.98e-57 189
MS.gene92551.t1 MTR_1g025680 35.227 352 215 8 7 350 11 357 2.88e-56 190
MS.gene92551.t1 MTR_4g087985 31.268 355 224 7 7 344 15 366 3.11e-56 188
MS.gene92551.t1 MTR_5g022630 35.331 317 195 8 26 337 43 354 4.67e-56 187
MS.gene92551.t1 MTR_2g084585 34.320 338 214 6 8 342 12 344 6.55e-56 186
MS.gene92551.t1 MTR_3g114120 33.438 320 196 6 26 338 47 356 1.08e-55 186
MS.gene92551.t1 MTR_1g025720 34.286 315 200 5 26 338 37 346 1.09e-55 186
MS.gene92551.t1 MTR_8g075200 32.923 325 210 6 26 347 41 360 2.66e-55 186
MS.gene92551.t1 MTR_1g079570 54.861 144 63 1 221 364 4 145 1.84e-54 176
MS.gene92551.t1 MTR_4g056160 34.139 331 202 8 26 349 27 348 2.20e-53 180
MS.gene92551.t1 MTR_3g114090 32.424 330 212 7 26 352 36 357 9.06e-53 179
MS.gene92551.t1 MTR_4g056280 34.062 320 203 6 26 342 30 344 1.33e-52 178
MS.gene92551.t1 MTR_2g015080 31.487 343 222 6 1 333 13 352 3.63e-52 177
MS.gene92551.t1 MTR_8g031400 33.043 345 207 8 23 358 34 363 1.31e-50 173
MS.gene92551.t1 MTR_2g017875 32.544 338 209 7 26 361 34 354 1.40e-50 173
MS.gene92551.t1 MTR_8g087870 31.686 344 219 7 19 360 22 351 1.90e-50 172
MS.gene92551.t1 MTR_2g017925 32.153 339 212 8 26 361 33 356 2.35e-50 172
MS.gene92551.t1 MTR_8g031390 32.571 350 211 9 23 363 34 367 3.36e-50 172
MS.gene92551.t1 MTR_1g025910 33.043 345 200 8 31 357 41 372 1.68e-49 171
MS.gene92551.t1 MTR_2g033920 36.567 268 164 4 23 288 32 295 3.11e-49 168
MS.gene92551.t1 MTR_8g074560 31.421 366 229 11 7 358 9 366 6.51e-49 169
MS.gene92551.t1 MTR_8g031420 31.594 345 212 8 23 358 32 361 2.69e-48 167
MS.gene92551.t1 MTR_8g031430 31.793 368 218 11 7 358 13 363 1.69e-47 165
MS.gene92551.t1 MTR_2g017955 30.027 373 241 9 1 363 1 363 3.31e-47 164
MS.gene92551.t1 MTR_2g017965 30.376 372 223 9 7 361 10 362 5.29e-47 164
MS.gene92551.t1 MTR_8g074580 30.000 390 206 8 24 359 42 418 1.64e-45 161
MS.gene92551.t1 MTR_5g083040 29.268 328 219 5 26 345 32 354 7.41e-45 158
MS.gene92551.t1 MTR_8g022810 28.493 365 230 10 2 347 9 361 1.16e-44 158
MS.gene92551.t1 MTR_2g017915 30.925 346 187 9 28 361 35 340 1.98e-41 149
MS.gene92551.t1 MTR_8g031390 33.448 290 173 8 23 308 34 307 5.14e-41 147
MS.gene92551.t1 MTR_8g022790 28.533 368 237 10 1 360 12 361 6.66e-41 147
MS.gene92551.t1 MTR_0009s0250 29.032 341 218 11 7 340 11 334 2.61e-38 140
MS.gene92551.t1 MTR_2g461580 26.901 342 223 9 26 361 31 351 9.04e-37 136
MS.gene92551.t1 MTR_5g093090 32.103 271 168 6 26 288 28 290 4.40e-36 133
MS.gene92551.t1 MTR_3g021460 26.113 337 226 9 26 358 31 348 1.44e-35 133
MS.gene92551.t1 MTR_8g089805 27.926 376 221 15 3 344 15 374 2.09e-32 125
MS.gene92551.t1 MTR_1g030268 27.989 368 216 14 7 344 21 369 1.68e-30 120
MS.gene92551.t1 MTR_7g087190 26.722 363 213 14 18 345 35 379 1.98e-30 120
MS.gene92551.t1 MTR_1g030275 28.883 367 215 16 7 344 19 368 4.08e-30 119
MS.gene92551.t1 MTR_7g111780 28.399 331 204 12 28 343 38 350 4.06e-29 115
MS.gene92551.t1 MTR_8g022810 29.688 256 149 8 2 236 9 254 3.33e-28 112
MS.gene92551.t1 MTR_2g017925 29.339 242 155 6 123 361 25 253 4.89e-28 110
MS.gene92551.t1 MTR_2g018015 32.751 229 150 3 19 244 29 256 1.65e-27 110
MS.gene92551.t1 MTR_2g015580 30.499 341 203 13 26 344 47 375 1.69e-27 112
MS.gene92551.t1 MTR_5g087690 25.723 346 225 10 26 358 50 376 1.84e-27 111
MS.gene92551.t1 MTR_8g089805 27.491 291 171 11 86 344 24 306 2.15e-26 107
MS.gene92551.t1 MTR_5g093090 39.189 148 83 2 26 166 28 175 5.64e-26 103
MS.gene92551.t1 MTR_0127s0040 25.105 239 173 4 124 360 4 238 8.25e-26 104
MS.gene92551.t1 MTR_2g015630 29.086 361 222 14 7 344 12 361 9.90e-26 107
MS.gene92551.t1 MTR_7g116870 27.778 378 219 17 1 345 7 363 1.08e-25 106
MS.gene92551.t1 MTR_1g030340 28.451 355 196 15 26 344 42 374 1.64e-25 106
MS.gene92551.t1 MTR_2g015590 29.825 342 205 13 26 344 31 360 2.45e-25 105
MS.gene92551.t1 MTR_7g113860 26.836 354 213 11 21 344 24 361 1.53e-24 103
MS.gene92551.t1 MTR_1g030230 25.995 377 227 15 1 344 6 363 1.53e-24 103
MS.gene92551.t1 MTR_1g030220 28.090 356 197 15 25 344 39 371 1.56e-24 103
MS.gene92551.t1 MTR_6g081170 60.465 86 31 1 34 119 1 83 5.43e-24 95.1
MS.gene92551.t1 MTR_4g036375 32.597 181 120 2 2 181 6 185 6.63e-24 97.8
MS.gene92551.t1 MTR_1108s0010 27.232 224 146 5 129 350 3 211 2.66e-23 96.7
MS.gene92551.t1 MTR_7g033165 27.762 353 203 15 26 345 33 366 3.13e-23 99.8
MS.gene92551.t1 MTR_5g016030 61.644 73 26 1 237 309 1 71 1.60e-22 90.5
MS.gene92551.t1 MTR_7g111780 27.925 265 162 9 94 343 1 251 1.63e-22 95.9
MS.gene92551.t1 MTR_2g043980 27.913 369 212 14 1 344 7 346 1.64e-22 97.4
MS.gene92551.t1 MTR_8g038680 27.273 374 229 13 1 345 1 360 1.81e-22 97.8
MS.gene92551.t1 MTR_3g463960 25.770 357 230 13 11 344 29 373 3.29e-22 97.1
MS.gene92551.t1 MTR_3g463950 25.770 357 230 13 11 344 29 373 3.29e-22 97.1
MS.gene92551.t1 MTR_3g463970 25.770 357 230 13 11 344 29 373 3.29e-22 97.1
MS.gene92551.t1 MTR_3g463940 25.770 357 230 13 11 344 29 373 3.29e-22 97.1
MS.gene92551.t1 MTR_7g033150 22.835 381 236 13 3 345 12 372 1.67e-21 95.1
MS.gene92551.t1 MTR_2g015650 29.915 351 192 17 26 344 31 359 1.70e-21 94.7
MS.gene92551.t1 MTR_8g028160 25.000 368 229 14 10 345 18 370 5.96e-21 93.6
MS.gene92551.t1 MTR_1g082390 25.956 366 225 13 7 343 13 361 6.56e-21 93.2
MS.gene92551.t1 MTR_6g007100 26.629 353 220 12 10 345 19 349 7.92e-21 92.8
MS.gene92551.t1 MTR_6g007090 26.997 363 223 13 8 345 21 366 1.16e-20 92.4
MS.gene92551.t1 MTR_1g030265 28.669 293 160 11 87 344 58 336 4.78e-20 90.5
MS.gene92551.t1 MTR_7g104220 24.924 329 208 12 26 341 42 344 6.11e-20 90.1
MS.gene92551.t1 MTR_1g060490 25.545 321 199 14 24 331 35 328 9.55e-20 89.4
MS.gene92551.t1 MTR_1g030268 26.821 302 182 12 7 288 21 303 1.22e-19 89.0
MS.gene92551.t1 MTR_6g007095 26.645 304 188 10 64 351 404 688 2.08e-19 90.1
MS.gene92551.t1 MTR_6g007095 26.801 347 208 14 26 345 41 368 5.92e-19 89.0
MS.gene92551.t1 MTR_7g113860 25.000 372 232 13 3 344 13 367 2.96e-19 88.6
MS.gene92551.t1 MTR_4g104240 25.723 346 222 13 25 351 38 367 4.45e-19 87.8
MS.gene92551.t1 MTR_3g463930 25.852 352 215 14 25 344 43 380 4.55e-19 88.2
MS.gene92551.t1 MTR_5g074210 30.496 141 94 2 199 337 62 200 4.89e-19 85.1
MS.gene92551.t1 MTR_7g113860 26.389 288 173 9 87 344 15 293 8.98e-19 86.3
MS.gene92551.t1 MTR_2g079090 25.620 363 226 13 6 344 2 344 1.86e-18 85.9
MS.gene92551.t1 MTR_7g033155 23.733 375 217 14 20 345 32 386 2.17e-18 86.3
MS.gene92551.t1 MTR_2g087292 24.629 337 163 8 8 336 8 261 2.24e-18 84.7
MS.gene92551.t1 MTR_6g049220 51.685 89 42 1 26 113 30 118 2.78e-18 81.6
MS.gene92551.t1 MTR_1g092750 26.332 319 194 12 27 331 41 332 4.27e-18 84.7
MS.gene92551.t1 MTR_1g060500 24.316 329 201 12 24 331 38 339 5.56e-18 84.7
MS.gene92551.t1 MTR_2g079080 25.620 363 226 13 6 344 2 344 5.77e-18 84.3
MS.gene92551.t1 MTR_0029s0050 26.462 359 216 14 12 344 8 344 1.48e-17 83.2
MS.gene92551.t1 MTR_0029s0100 26.462 359 216 14 12 344 8 344 2.24e-17 82.8
MS.gene92551.t1 MTR_1g092690 26.316 323 189 15 26 331 51 341 2.90e-17 82.4
MS.gene92551.t1 MTR_1g092760 26.488 336 193 12 16 331 29 330 4.11e-17 82.0
MS.gene92551.t1 MTR_3g438030 26.377 345 220 15 25 348 29 360 6.45e-17 81.6
MS.gene92551.t1 MTR_7g033165 28.169 284 167 13 26 288 33 300 3.23e-15 75.9
MS.gene92551.t1 MTR_2g017895 25.856 263 148 6 96 347 26 252 1.36e-13 70.5
MS.gene92551.t1 MTR_8g012540 25.150 334 213 11 1 312 1 319 2.24e-12 67.8
MS.gene92551.t1 MTR_3g011860 34.524 84 53 1 235 318 241 322 8.42e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92551.t1 AT5G33370 70.506 356 103 1 9 364 13 366 0.0 540
MS.gene92551.t1 AT3G04290 72.807 342 91 1 21 362 24 363 0.0 524
MS.gene92551.t1 AT5G18430 67.227 357 110 4 6 360 11 362 1.31e-171 482
MS.gene92551.t1 AT4G28780 63.760 367 120 4 6 362 2 365 1.56e-166 469
MS.gene92551.t1 AT5G33370 70.357 280 81 1 9 288 13 290 1.74e-144 412
MS.gene92551.t1 AT2G23540 37.427 342 205 7 26 360 48 387 1.65e-77 243
MS.gene92551.t1 AT3G50400 39.481 347 199 10 16 354 25 368 1.86e-76 240
MS.gene92551.t1 AT4G18970 39.766 342 195 7 24 360 26 361 1.56e-74 235
MS.gene92551.t1 AT2G42990 37.249 349 210 7 5 350 8 350 3.12e-74 234
MS.gene92551.t1 AT4G18970 40.118 339 192 7 24 357 26 358 8.31e-74 235
MS.gene92551.t1 AT5G15720 37.391 345 208 5 20 360 24 364 1.13e-73 233
MS.gene92551.t1 AT5G45670 35.989 364 224 7 1 360 4 362 5.20e-73 231
MS.gene92551.t1 AT5G37690 39.617 313 183 5 28 339 29 336 5.85e-73 231
MS.gene92551.t1 AT1G29660 37.685 337 202 6 27 360 33 364 1.07e-70 225
MS.gene92551.t1 AT1G71250 34.734 357 222 5 9 357 17 370 2.70e-70 224
MS.gene92551.t1 AT1G29670 36.011 361 218 6 8 360 8 363 3.02e-70 224
MS.gene92551.t1 AT5G08460 36.716 335 208 4 26 357 49 382 6.14e-70 224
MS.gene92551.t1 AT1G29670 36.011 361 218 6 8 360 76 431 1.19e-69 224
MS.gene92551.t1 AT1G71691 38.279 337 200 7 26 361 55 384 3.30e-68 219
MS.gene92551.t1 AT4G26790 35.938 320 197 6 26 342 29 343 1.10e-67 217
MS.gene92551.t1 AT4G26790 35.938 320 197 6 26 342 29 343 1.10e-67 217
MS.gene92551.t1 AT5G37690 38.339 313 179 6 28 339 29 328 1.99e-67 216
MS.gene92551.t1 AT1G75880 36.250 320 197 5 26 342 52 367 4.61e-67 216
MS.gene92551.t1 AT1G75880 36.250 320 196 6 26 342 52 366 4.26e-66 214
MS.gene92551.t1 AT1G33811 36.752 351 210 9 14 357 22 367 6.12e-66 213
MS.gene92551.t1 AT2G30310 35.783 313 191 7 26 333 34 341 1.42e-64 209
MS.gene92551.t1 AT2G30220 36.278 317 192 7 26 337 33 344 2.53e-64 209
MS.gene92551.t1 AT2G04570 35.604 323 200 6 26 345 28 345 2.56e-64 208
MS.gene92551.t1 AT1G75890 35.913 323 194 8 26 342 47 362 3.42e-64 208
MS.gene92551.t1 AT1G74460 36.308 325 200 6 28 350 25 344 9.77e-64 207
MS.gene92551.t1 AT1G75890 35.913 323 194 8 26 342 76 391 1.02e-63 208
MS.gene92551.t1 AT1G58430 36.452 310 189 6 26 331 35 340 2.56e-63 206
MS.gene92551.t1 AT5G42170 35.110 319 196 6 27 342 51 361 5.25e-62 203
MS.gene92551.t1 AT1G06990 34.295 312 196 6 26 333 37 343 7.20e-62 202
MS.gene92551.t1 AT2G31540 36.278 317 192 7 26 337 35 346 7.51e-62 202
MS.gene92551.t1 AT5G03820 36.158 354 200 8 6 342 5 349 2.81e-61 201
MS.gene92551.t1 AT5G41890 32.065 368 225 9 8 357 12 372 3.02e-61 201
MS.gene92551.t1 AT1G75890 34.627 335 195 9 26 342 47 375 3.78e-61 201
MS.gene92551.t1 AT2G24560 35.144 313 189 7 26 331 34 339 7.68e-61 200
MS.gene92551.t1 AT5G03820 36.158 354 200 8 6 342 33 377 1.07e-60 200
MS.gene92551.t1 AT1G75900 34.385 317 197 7 26 338 43 352 2.93e-60 198
MS.gene92551.t1 AT5G03810 36.932 352 203 8 1 342 3 345 4.20e-60 197
MS.gene92551.t1 AT1G20120 33.851 322 201 7 26 342 78 392 7.01e-60 198
MS.gene92551.t1 AT4G10950 34.030 335 216 4 26 358 71 402 1.67e-59 197
MS.gene92551.t1 AT3G16370 36.909 317 191 7 26 338 30 341 2.81e-59 195
MS.gene92551.t1 AT5G45950 33.033 333 211 7 19 347 29 353 4.69e-59 195
MS.gene92551.t1 AT1G59406 35.202 321 195 6 26 342 30 341 5.87e-59 194
MS.gene92551.t1 AT1G59030 35.202 321 195 6 26 342 30 341 5.87e-59 194
MS.gene92551.t1 AT1G58725 35.202 321 195 6 26 342 30 341 5.87e-59 194
MS.gene92551.t1 AT1G20130 33.033 333 200 8 26 342 184 509 9.11e-58 196
MS.gene92551.t1 AT1G20130 33.033 333 200 8 26 342 204 529 1.32e-57 196
MS.gene92551.t1 AT5G22810 36.615 325 191 9 26 342 34 351 1.56e-57 191
MS.gene92551.t1 AT5G45960 32.907 313 202 4 26 333 47 356 2.80e-57 191
MS.gene92551.t1 AT1G20132 34.441 331 206 7 26 353 61 383 4.47e-57 191
MS.gene92551.t1 AT4G10950 34.226 336 210 6 26 358 71 398 1.01e-56 190
MS.gene92551.t1 AT3G53100 36.760 321 193 7 26 342 29 343 4.46e-56 187
MS.gene92551.t1 AT1G58520 34.579 321 190 7 26 342 30 334 9.99e-55 183
MS.gene92551.t1 AT1G58525 34.579 321 190 7 26 342 30 334 9.99e-55 183
MS.gene92551.t1 AT5G63170 35.045 331 194 9 6 333 9 321 1.17e-54 183
MS.gene92551.t1 AT5G15720 34.657 277 175 4 88 360 59 333 6.36e-54 181
MS.gene92551.t1 AT2G19060 32.857 350 207 11 6 344 4 336 1.27e-53 181
MS.gene92551.t1 AT5G55050 33.138 341 215 7 27 359 40 375 1.91e-53 181
MS.gene92551.t1 AT2G19010 33.048 351 211 10 11 357 15 345 4.52e-53 179
MS.gene92551.t1 AT3G43570 33.229 319 175 6 26 342 30 312 5.93e-53 178
MS.gene92551.t1 AT2G19010 33.048 351 211 10 11 357 45 375 7.39e-53 179
MS.gene92551.t1 AT4G16230 44.105 229 114 5 7 225 5 229 1.55e-52 175
MS.gene92551.t1 AT5G40990 31.217 378 232 11 3 361 6 374 2.06e-52 178
MS.gene92551.t1 AT1G73610 34.688 320 188 8 26 342 35 336 5.17e-52 176
MS.gene92551.t1 AT2G40250 31.875 320 204 5 26 337 36 349 7.42e-52 176
MS.gene92551.t1 AT5G15720 37.545 277 165 5 20 292 24 296 3.19e-51 173
MS.gene92551.t1 AT1G20135 31.343 335 207 9 11 338 9 327 6.36e-51 173
MS.gene92551.t1 AT2G19050 33.036 336 199 8 27 357 32 346 1.59e-50 172
MS.gene92551.t1 AT1G71691 34.843 287 180 6 76 361 3 283 3.25e-50 170
MS.gene92551.t1 AT3G14820 30.571 350 225 9 8 350 12 350 1.90e-49 170
MS.gene92551.t1 AT4G30140 33.634 333 201 8 27 358 34 347 3.37e-49 169
MS.gene92551.t1 AT2G24560 33.803 284 174 7 26 302 34 310 2.72e-48 166
MS.gene92551.t1 AT1G53940 31.250 352 212 13 26 361 39 376 3.00e-47 164
MS.gene92551.t1 AT1G23500 31.707 328 202 8 21 344 30 339 2.16e-46 161
MS.gene92551.t1 AT3G14225 30.484 351 218 10 26 360 37 377 4.20e-46 162
MS.gene92551.t1 AT1G71120 33.235 340 204 13 26 357 31 355 5.17e-46 161
MS.gene92551.t1 AT3G14225 30.659 349 216 10 26 360 37 373 9.58e-46 160
MS.gene92551.t1 AT1G71691 39.015 264 153 7 26 288 55 311 1.47e-45 158
MS.gene92551.t1 AT1G75910 30.938 320 206 6 26 342 28 335 1.08e-44 157
MS.gene92551.t1 AT1G75920 29.683 347 214 8 9 342 6 335 1.13e-44 157
MS.gene92551.t1 AT1G75930 32.492 317 194 8 26 337 29 330 1.83e-44 156
MS.gene92551.t1 AT1G53990 29.521 376 224 13 7 360 8 364 3.47e-43 154
MS.gene92551.t1 AT3G43550 33.456 272 169 5 20 288 24 286 2.04e-42 149
MS.gene92551.t1 AT1G75920 28.453 362 214 9 9 342 1 345 8.37e-41 147
MS.gene92551.t1 AT2G19050 34.568 243 151 3 27 269 32 266 8.58e-40 142
MS.gene92551.t1 AT2G03980 30.818 318 202 8 26 336 43 349 4.71e-38 140
MS.gene92551.t1 AT2G03980 30.818 318 202 8 26 336 43 349 4.71e-38 140
MS.gene92551.t1 AT2G03980 30.818 318 202 8 26 336 43 349 4.71e-38 140
MS.gene92551.t1 AT2G03980 30.818 318 202 8 26 336 43 349 4.71e-38 140
MS.gene92551.t1 AT1G53920 28.940 349 222 12 26 360 48 384 1.46e-36 136
MS.gene92551.t1 AT2G31550 32.701 211 135 4 133 340 2 208 7.11e-36 130
MS.gene92551.t1 AT1G75920 28.655 342 193 8 9 342 6 304 8.08e-36 133
MS.gene92551.t1 AT1G75920 27.852 298 191 7 52 342 27 307 5.61e-34 128
MS.gene92551.t1 AT1G56670 28.142 366 215 13 6 343 12 357 1.04e-31 123
MS.gene92551.t1 AT1G54030 29.619 341 209 14 24 360 50 363 1.01e-30 121
MS.gene92551.t1 AT1G09390 29.086 361 214 12 8 343 11 354 2.48e-29 116
MS.gene92551.t1 AT1G53940 30.797 276 167 12 26 291 39 300 4.71e-29 114
MS.gene92551.t1 AT3G62280 28.363 342 205 13 30 353 40 359 4.91e-27 110
MS.gene92551.t1 AT5G45910 30.337 356 198 17 22 344 26 364 6.18e-27 110
MS.gene92551.t1 AT5G14450 27.273 374 224 14 3 344 16 373 1.54e-26 109
MS.gene92551.t1 AT4G01130 26.790 377 221 15 7 348 15 371 8.47e-25 104
MS.gene92551.t1 AT3G26430 28.895 353 199 15 26 344 31 365 1.39e-24 103
MS.gene92551.t1 AT1G54790 27.807 374 217 14 6 344 9 364 1.55e-24 103
MS.gene92551.t1 AT3G14220 25.069 363 243 12 7 359 9 352 7.56e-24 101
MS.gene92551.t1 AT3G27950 27.457 346 206 10 26 345 32 358 1.08e-23 101
MS.gene92551.t1 AT3G09930 28.060 335 200 14 19 337 32 341 1.13e-23 100
MS.gene92551.t1 AT3G09930 28.060 335 200 14 19 337 32 341 1.13e-23 100
MS.gene92551.t1 AT3G05180 27.794 349 206 13 26 344 36 368 2.39e-23 100
MS.gene92551.t1 AT1G54790 27.557 352 199 15 28 344 33 363 5.25e-23 99.4
MS.gene92551.t1 AT4G16233 35.200 125 78 2 234 357 5 127 1.55e-22 92.4
MS.gene92551.t1 AT1G31550 29.275 386 222 19 6 360 14 379 2.39e-22 97.8
MS.gene92551.t1 AT1G67830 27.095 358 213 15 19 344 23 364 4.10e-22 96.7
MS.gene92551.t1 AT2G04020 32.673 202 123 4 26 223 43 235 8.55e-22 94.0
MS.gene92551.t1 AT2G04020 32.558 215 129 5 26 233 43 248 9.01e-22 95.1
MS.gene92551.t1 AT1G54000 25.341 367 232 14 9 357 12 354 4.16e-21 94.0
MS.gene92551.t1 AT1G28670 28.883 367 222 15 6 344 10 365 4.21e-21 94.0
MS.gene92551.t1 AT1G56670 27.451 306 179 11 6 288 12 297 7.88e-21 92.0
MS.gene92551.t1 AT1G54010 25.745 369 230 15 9 358 12 355 1.03e-20 92.8
MS.gene92551.t1 AT1G28570 28.371 356 219 18 25 357 33 375 1.42e-20 92.4
MS.gene92551.t1 AT5G03610 25.776 322 205 12 28 337 45 344 1.46e-20 92.0
MS.gene92551.t1 AT4G16220 47.321 112 56 2 7 117 11 120 2.76e-20 89.4
MS.gene92551.t1 AT1G54020 25.000 348 235 11 15 358 22 347 4.72e-20 90.9
MS.gene92551.t1 AT1G28660 29.730 370 214 16 6 344 10 364 4.79e-20 90.9
MS.gene92551.t1 AT1G28650 28.415 366 220 16 8 344 14 366 1.43e-19 89.4
MS.gene92551.t1 AT1G28640 28.686 373 216 19 6 345 10 365 1.74e-19 89.4
MS.gene92551.t1 AT3G14210 26.801 347 215 12 26 358 36 357 1.78e-19 89.4
MS.gene92551.t1 AT1G54030 28.629 248 152 9 24 268 50 275 3.64e-19 87.4
MS.gene92551.t1 AT3G48460 25.872 344 210 14 28 345 40 364 1.08e-18 87.0
MS.gene92551.t1 AT4G01130 26.599 297 171 11 87 348 1 285 1.23e-18 85.5
MS.gene92551.t1 AT1G54790 25.867 375 202 14 28 344 33 389 5.70e-18 85.1
MS.gene92551.t1 AT1G28590 25.956 366 239 15 1 344 10 365 4.29e-16 79.3
MS.gene92551.t1 AT4G01130 26.645 304 181 13 7 288 15 298 6.90e-16 78.2
MS.gene92551.t1 AT3G62280 28.195 266 158 10 30 280 40 287 1.87e-15 76.6
MS.gene92551.t1 AT2G36325 25.278 360 215 14 3 337 16 346 1.61e-12 68.6

Find 79 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGGGATCTTTATGCATTT+TGG 0.100711 4.2:+82375269 MS.gene92551:CDS
CATTCCCACCTAAAGTTATT+AGG 0.124247 4.2:-82372161 None:intergenic
CTTCTAACTTGTGCCCTAAT+AGG 0.217615 4.2:+82375251 MS.gene92551:CDS
AATGCATAAAGATCCCTATT+AGG 0.244612 4.2:-82375265 None:intergenic
AATCAACTCAATGCTGAAAT+TGG 0.265479 4.2:+82373689 MS.gene92551:CDS
ATAAGTGTACTAAGATTATA+TGG 0.279256 4.2:-82375370 None:intergenic
TTTATCAACGATTAGTCTAT+TGG 0.279659 4.2:-82375317 None:intergenic
ACTGTTTAAAGTATGCTAAT+TGG 0.292401 4.2:-82372071 None:intergenic
CATACAGAATCTATATGAAT+TGG 0.299167 4.2:+82373523 MS.gene92551:intron
CGTGCTGATTCATATCCTTA+TGG 0.309899 4.2:+82370722 MS.gene92551:CDS
GATGGTGAAAGGTTGCTTAA+TGG 0.313083 4.2:+82371042 MS.gene92551:CDS
CAGAGGGTTAGCGCACTAAT+TGG 0.316203 4.2:+82372099 MS.gene92551:CDS
TCTCAAACTCATAGAGCTTC+TGG 0.319164 4.2:+82370752 MS.gene92551:CDS
TCAAGCTCTGGACTCAAATA+TGG 0.322479 4.2:-82371021 None:intergenic
ATTCCCACCTAAAGTTATTA+GGG 0.330551 4.2:-82372160 None:intergenic
TGAGTATCGCAAAATTCTTA+TGG 0.332687 4.2:+82372269 MS.gene92551:CDS
GCATTAACCCTAATAACTTT+AGG 0.343222 4.2:+82372153 MS.gene92551:CDS
ATTGGGAGCAAGAAGAGTTT+TGG 0.351874 4.2:+82373541 MS.gene92551:CDS
GGTGATTCTCTTGTGGATAA+TGG 0.360020 4.2:+82370671 MS.gene92551:CDS
TTCTAACTTGTGCCCTAATA+GGG 0.362728 4.2:+82375252 MS.gene92551:CDS
CTGTTTAAAGTATGCTAATT+GGG 0.373885 4.2:-82372070 None:intergenic
ATGCATAAAGATCCCTATTA+GGG 0.388461 4.2:-82375264 None:intergenic
GCATAGATGAAGACATGATT+AGG 0.388507 4.2:-82373716 None:intergenic
AGGTTGTGTGCCAGCAGAAT+TGG 0.403582 4.2:+82373583 MS.gene92551:CDS
AAATGAGCACTCAACTAATA+AGG 0.407140 4.2:-82370805 None:intergenic
ATGCTAATTGGGCAGTAATT+CGG 0.407503 4.2:-82372059 None:intergenic
TTGGCTATGCAAGGAAGAAA+TGG 0.409678 4.2:+82373602 MS.gene92551:CDS
AAATGCCTTTGCTATGCATT+TGG 0.417717 4.2:+82373739 MS.gene92551:CDS
ATGAGGAAGACAACATAATC+AGG 0.437834 4.2:-82372243 None:intergenic
ATTATATGGGTGCATGTAAT+CGG 0.440216 4.2:-82375356 None:intergenic
AGTCTATTGGCTCTTTCTGA+TGG 0.442836 4.2:-82375304 None:intergenic
GCTCTTTCTGATGGATGAAA+GGG 0.446836 4.2:-82375295 None:intergenic
TCTTAGTACACTTATTGCTA+TGG 0.450346 4.2:+82375378 MS.gene92551:CDS
TATTTGAGTCCAGAGCTTGA+TGG 0.458469 4.2:+82371024 MS.gene92551:CDS
GGACTCAAATATGGTAATGT+AGG 0.461253 4.2:-82371012 None:intergenic
GGCTCTTTCTGATGGATGAA+AGG 0.468116 4.2:-82375296 None:intergenic
GTCAGGCATGTTGAGGCCAT+TGG 0.468967 4.2:-82370783 None:intergenic
ATCGTTGATAAATTTATGAC+TGG 0.473147 4.2:+82375328 MS.gene92551:CDS
AAGAGCATATTCACGAGATC+TGG 0.473248 4.2:-82372220 None:intergenic
CATAGTCCAACTCCATTGTA+TGG 0.486320 4.2:-82375220 None:intergenic
ATACAGAATCTATATGAATT+GGG 0.488950 4.2:+82373524 MS.gene92551:intron
CCTTGCATAGCCAATTCTGC+TGG 0.494918 4.2:-82373593 None:intergenic
GCTTCTGGTCGTTTCTCCAA+TGG 0.503907 4.2:+82370767 MS.gene92551:CDS
GTTTGAGAATCAATTCCATA+AGG 0.506762 4.2:-82370737 None:intergenic
AACACACAAAGAAATATTGA+AGG 0.510102 4.2:-82370593 None:intergenic
TTAACCCTAATAACTTTAGG+TGG 0.521401 4.2:+82372156 MS.gene92551:CDS
CAACTCAATGCTGAAATTGG+TGG 0.521897 4.2:+82373692 MS.gene92551:CDS
TTAATCAATTGAACAAGTTG+AGG 0.526832 4.2:-82373668 None:intergenic
AACCTTTCACCATCAAGCTC+TGG 0.531953 4.2:-82371033 None:intergenic
AGCACTCAACTAATAAGGTC+AGG 0.533862 4.2:-82370800 None:intergenic
CAGCACGAGCAGTAGTAGCT+AGG 0.535195 4.2:-82370706 None:intergenic
TTCACGAGATCTGGCTGAGT+AGG 0.549249 4.2:-82372211 None:intergenic
CAAGGACCATACAATGGAGT+TGG 0.550513 4.2:+82375214 MS.gene92551:CDS
GTTTCTAATCCACAAGCATA+CGG 0.553825 4.2:+82373767 MS.gene92551:CDS
GTGACAGGAACGGGACCACT+AGG 0.554470 4.2:+82373563 MS.gene92551:CDS
TTAGTGCGCTAACCCTCTGC+TGG 0.554769 4.2:-82372095 None:intergenic
AAACATGCATGTTGTGGTCA+AGG 0.555677 4.2:+82375196 MS.gene92551:CDS
GTGTTGATCACCTTGAGCAT+TGG 0.558772 4.2:+82370611 MS.gene92551:CDS
TCACGAGATCTGGCTGAGTA+GGG 0.559568 4.2:-82372210 None:intergenic
TTAGGGCACAAGTTAGAAGC+TGG 0.566816 4.2:-82375247 None:intergenic
TTGTTGAACACCAATGCTCA+AGG 0.567686 4.2:-82370621 None:intergenic
GGAAATATACCGTATGCTTG+TGG 0.571755 4.2:-82373776 None:intergenic
TGTGTTTGGTGATTCTCTTG+TGG 0.580293 4.2:+82370664 MS.gene92551:CDS
TAAGTGTACTAAGATTATAT+GGG 0.583474 4.2:-82375369 None:intergenic
AAGTTAGTAGCTGTTTGAAG+AGG 0.588986 4.2:-82373638 None:intergenic
CTCTTTCTGATGGATGAAAG+GGG 0.589840 4.2:-82375294 None:intergenic
CCAGCAGAATTGGCTATGCA+AGG 0.594783 4.2:+82373593 MS.gene92551:CDS
TAACCCTAATAACTTTAGGT+GGG 0.599439 4.2:+82372157 MS.gene92551:CDS
ATTGGAATTCTCAATGACAC+TGG 0.602237 4.2:+82371087 MS.gene92551:CDS
CGCACTAATTGGAGAAAGTG+AGG 0.612101 4.2:+82372110 MS.gene92551:CDS
GTCCAGAGCTTGATGGTGAA+AGG 0.614928 4.2:+82371031 MS.gene92551:CDS
GAAATCCAAATGCATAGCAA+AGG 0.615273 4.2:-82373744 None:intergenic
TAATAAGGTCAGGCATGTTG+AGG 0.615842 4.2:-82370790 None:intergenic
CTTTAAACAGTACCAGCAGA+GGG 0.628353 4.2:+82372083 MS.gene92551:CDS
CAAGGAAGAAATGGAGAGTG+TGG 0.633620 4.2:+82373611 MS.gene92551:CDS
ACTTTAAACAGTACCAGCAG+AGG 0.640496 4.2:+82372082 MS.gene92551:CDS
ACATCAAAACATGCATGTTG+TGG 0.666826 4.2:+82375190 MS.gene92551:CDS
TGTGGTCAAGGACCATACAA+TGG 0.678040 4.2:+82375208 MS.gene92551:CDS
TCTGCTGGCACACAACCTAG+TGG 0.689336 4.2:-82373578 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATAATAATTGATGTA+CGG - chr4.2:82373449-82373468 None:intergenic 10.0%
!! CAAAAAAAATAAATATTAGT+AGG - chr4.2:82372612-82372631 None:intergenic 10.0%
!! CATATATAAAAAACAAAAAA+TGG - chr4.2:82375159-82375178 None:intergenic 10.0%
!!! AAAATCTAATATTTTGTTTT+AGG + chr4.2:82370928-82370947 MS.gene92551:intron 10.0%
!!! AAATCTAATATTTTGTTTTA+GGG + chr4.2:82370929-82370948 MS.gene92551:intron 10.0%
!!! ATGAAATATTTTTTTTTATG+AGG + chr4.2:82373212-82373231 MS.gene92551:intron 10.0%
!!! TGAAATATTTTTTTTTATGA+GGG + chr4.2:82373213-82373232 MS.gene92551:intron 10.0%
!! AAATCTATATAATACGTATA+TGG - chr4.2:82374668-82374687 None:intergenic 15.0%
!! AAATGATGAAAATTAAACAA+AGG - chr4.2:82372319-82372338 None:intergenic 15.0%
!! AATGATGAAAATTAAACAAA+GGG - chr4.2:82372318-82372337 None:intergenic 15.0%
!! TAGCTATATAGTTAATAAAA+GGG + chr4.2:82372696-82372715 MS.gene92551:intron 15.0%
!! TATATATAAAAACAGTTGAA+TGG + chr4.2:82372522-82372541 MS.gene92551:intron 15.0%
!! TTAGATAATTAGATACAAAT+AGG - chr4.2:82372014-82372033 None:intergenic 15.0%
!! TTAGCTATATAGTTAATAAA+AGG + chr4.2:82372695-82372714 MS.gene92551:intron 15.0%
!!! AAGACATGAAAATTAATTTT+TGG + chr4.2:82371543-82371562 MS.gene92551:intron 15.0%
!!! AATTCAACATTTTTACTATA+TGG - chr4.2:82373393-82373412 None:intergenic 15.0%
!!! ACTTAATAACATTTTATTTC+AGG - chr4.2:82374409-82374428 None:intergenic 15.0%
!!! AGAAGCTTTTTTTTTTTTTT+TGG - chr4.2:82372988-82373007 None:intergenic 15.0%
!!! ATACTCAAATAAAAGTATAT+AGG - chr4.2:82374184-82374203 None:intergenic 15.0%
!!! ATCTATTTTATTTCAATATG+TGG + chr4.2:82373112-82373131 MS.gene92551:intron 15.0%
!!! ATCTTTTTTTTTTGAAATGT+TGG - chr4.2:82373050-82373069 None:intergenic 15.0%
!!! ATGTGGATTTTAATATTAAT+CGG - chr4.2:82373349-82373368 None:intergenic 15.0%
!!! ATTGATTTTCAAATTTTTAG+TGG - chr4.2:82371516-82371535 None:intergenic 15.0%
!!! TACTCAAATAAAAGTATATA+GGG - chr4.2:82374183-82374202 None:intergenic 15.0%
!!! TATTAGTAGGTTTTTTTATA+AGG - chr4.2:82372599-82372618 None:intergenic 15.0%
!!! TCAAGAAAATCATTTTTTTA+AGG - chr4.2:82371294-82371313 None:intergenic 15.0%
!!! TCTTTTTTTTTTGAAATGTT+GGG - chr4.2:82373049-82373068 None:intergenic 15.0%
!!! TTCAACTGTTTTTATATATA+TGG - chr4.2:82372522-82372541 None:intergenic 15.0%
!!! TTTTACTATATGGTTATATT+TGG - chr4.2:82373383-82373402 None:intergenic 15.0%
!!! TTTTATAAGGAAAATACTAT+AGG - chr4.2:82372586-82372605 None:intergenic 15.0%
!!! TTTTTGTTTTTTATATATGC+AGG + chr4.2:82375160-82375179 MS.gene92551:intron 15.0%
!! AACTCCATATATTATACTAT+TGG + chr4.2:82371237-82371256 MS.gene92551:intron 20.0%
!! AAGTTTAACCAAATTAAGAT+TGG - chr4.2:82373800-82373819 None:intergenic 20.0%
!! ATAAGTGTACTAAGATTATA+TGG - chr4.2:82375373-82375392 None:intergenic 20.0%
!! ATACAGAATCTATATGAATT+GGG + chr4.2:82373524-82373543 MS.gene92551:intron 20.0%
!! ATATTAAGAGTAATGTTAAC+CGG - chr4.2:82372877-82372896 None:intergenic 20.0%
!! ATTCAATGTTATAACACAAT+TGG - chr4.2:82373497-82373516 None:intergenic 20.0%
!! CTATAAATTATGAATGTGAT+AGG + chr4.2:82370970-82370989 MS.gene92551:intron 20.0%
!! CTATATTACTACTACATATT+AGG - chr4.2:82374949-82374968 None:intergenic 20.0%
!! GATTCAAATACTATGAAAAA+AGG - chr4.2:82374148-82374167 None:intergenic 20.0%
!! GGAAGAAATCATATATATTT+AGG - chr4.2:82371273-82371292 None:intergenic 20.0%
!! GTATATTTCCAATCTTAATT+TGG + chr4.2:82373789-82373808 MS.gene92551:intron 20.0%
!! TAAGTGTACTAAGATTATAT+GGG - chr4.2:82375372-82375391 None:intergenic 20.0%
!! TACTATATATTGAACCATAT+AGG - chr4.2:82374810-82374829 None:intergenic 20.0%
!! TAGATGAGTTAATTAATGTT+TGG + chr4.2:82373271-82373290 MS.gene92551:intron 20.0%
!! TAGTATAATATATGGAGTTT+AGG - chr4.2:82371236-82371255 None:intergenic 20.0%
!! TATGCTAGATTTAAATTGTT+AGG + chr4.2:82373919-82373938 MS.gene92551:intron 20.0%
!! TCAATAAAAATTTACGACTT+TGG + chr4.2:82371878-82371897 MS.gene92551:intron 20.0%
!! TCTCACTTAATATAAAATGT+TGG - chr4.2:82374381-82374400 None:intergenic 20.0%
!! TGTACCAATAGTATAATATA+TGG - chr4.2:82371244-82371263 None:intergenic 20.0%
!!! AACATTATCTTTAGAAATGT+TGG - chr4.2:82373084-82373103 None:intergenic 20.0%
!!! ACATATTTTCTTAGATGTTT+AGG - chr4.2:82375033-82375052 None:intergenic 20.0%
!!! ACATTATCTTTAGAAATGTT+GGG - chr4.2:82373083-82373102 None:intergenic 20.0%
!!! AGCTTTTTTTTTTTTTTTGG+TGG - chr4.2:82372985-82373004 None:intergenic 20.0%
!!! CCAAAATTTTATCTGAAATT+TGG + chr4.2:82371845-82371864 MS.gene92551:intron 20.0%
!!! CCAAATTTCAGATAAAATTT+TGG - chr4.2:82371848-82371867 None:intergenic 20.0%
!!! GGAATTAAATGTGTTTTTTT+TGG + chr4.2:82373243-82373262 MS.gene92551:intron 20.0%
!!! TAATTAATATGTTTAGCTCT+TGG + chr4.2:82374025-82374044 MS.gene92551:intron 20.0%
!!! TCATCTACTATTTTGTTTTA+GGG + chr4.2:82370887-82370906 MS.gene92551:intron 20.0%
!!! TTCATCTACTATTTTGTTTT+AGG + chr4.2:82370886-82370905 MS.gene92551:intron 20.0%
!!! TTTTGTGAACAACTATTATT+TGG + chr4.2:82372185-82372204 MS.gene92551:CDS 20.0%
!!! TTTTTTTATGAGGGTTAATT+AGG + chr4.2:82373222-82373241 MS.gene92551:intron 20.0%
!!! TTTTTTTTTTTTTTTGGTGG+TGG - chr4.2:82372982-82373001 None:intergenic 20.0%
! AAAATAGTAGATGAAAGCTA+GGG - chr4.2:82370881-82370900 None:intergenic 25.0%
! AACAATGCATAATATATGCA+AGG + chr4.2:82372937-82372956 MS.gene92551:intron 25.0%
! AACACACAAAGAAATATTGA+AGG - chr4.2:82370596-82370615 None:intergenic 25.0%
! AATAAAAGGGTTATGTTAAC+CGG + chr4.2:82372709-82372728 MS.gene92551:intron 25.0%
! AATGTGATAGGTGAAAAAAT+TGG + chr4.2:82370982-82371001 MS.gene92551:intron 25.0%
! ATAATAATTGATGTACGGAT+TGG - chr4.2:82373444-82373463 None:intergenic 25.0%
! ATGTGATAGGTGAAAAAATT+GGG + chr4.2:82370983-82371002 MS.gene92551:intron 25.0%
! ATTATACCAACAAAAGTTTG+TGG - chr4.2:82375065-82375084 None:intergenic 25.0%
! CAAATATAGTAACATCACAT+TGG - chr4.2:82372828-82372847 None:intergenic 25.0%
! CATACAGAATCTATATGAAT+TGG + chr4.2:82373523-82373542 MS.gene92551:intron 25.0%
! CTTTGGTATAAAATGAAAAG+AGG + chr4.2:82371895-82371914 MS.gene92551:intron 25.0%
! GACTTTGACCAAATATATTA+GGG - chr4.2:82372498-82372517 None:intergenic 25.0%
! GAGTAAAGAACCTTTAAATT+GGG + chr4.2:82372635-82372654 MS.gene92551:intron 25.0%
! GGTGATAAATACTTTCAAAT+TGG - chr4.2:82375138-82375157 None:intergenic 25.0%
! TAAATGAAAAAATGCATGCT+TGG + chr4.2:82375084-82375103 MS.gene92551:intron 25.0%
! TACTATATGGTTATATTTGG+TGG - chr4.2:82373380-82373399 None:intergenic 25.0%
! TAGATTTAAATTGTTAGGTC+CGG + chr4.2:82373924-82373943 MS.gene92551:intron 25.0%
! TCATTACACAGGTAAATTTA+GGG - chr4.2:82371955-82371974 None:intergenic 25.0%
! TGACTTTGACCAAATATATT+AGG - chr4.2:82372499-82372518 None:intergenic 25.0%
! TGAGTAAAGAACCTTTAAAT+TGG + chr4.2:82372634-82372653 MS.gene92551:intron 25.0%
! TTAATCAATTGAACAAGTTG+AGG - chr4.2:82373671-82373690 None:intergenic 25.0%
! TTACTACTACATATTAGGAA+TGG - chr4.2:82374944-82374963 None:intergenic 25.0%
! TTATACCAACAAAAGTTTGT+GGG - chr4.2:82375064-82375083 None:intergenic 25.0%
! TTCATTACACAGGTAAATTT+AGG - chr4.2:82371956-82371975 None:intergenic 25.0%
!! ACTGTTTAAAGTATGCTAAT+TGG - chr4.2:82372074-82372093 None:intergenic 25.0%
!! ATCGTTGATAAATTTATGAC+TGG + chr4.2:82375328-82375347 MS.gene92551:CDS 25.0%
!! ATTGATTTCTTTCATTACAC+AGG - chr4.2:82371966-82371985 None:intergenic 25.0%
!! CTGTTTAAAGTATGCTAATT+GGG - chr4.2:82372073-82372092 None:intergenic 25.0%
!! TTTGACTAAGTATAGCTTTT+AGG + chr4.2:82374100-82374119 MS.gene92551:intron 25.0%
!!! AAATGTTTTTTCAATGAGCA+TGG - chr4.2:82375000-82375019 None:intergenic 25.0%
!!! AATTTTTGGATCATACATGT+AGG + chr4.2:82371557-82371576 MS.gene92551:intron 25.0%
!!! ATTTTTGGATCATACATGTA+GGG + chr4.2:82371558-82371577 MS.gene92551:intron 25.0%
!!! TTTATCAACGATTAGTCTAT+TGG - chr4.2:82375320-82375339 None:intergenic 25.0%
AAAGTATATAGGGTTTGTCT+AGG - chr4.2:82374173-82374192 None:intergenic 30.0%
AAATGAGCACTCAACTAATA+AGG - chr4.2:82370808-82370827 None:intergenic 30.0%
AACTAAAGTGAAGTAGTCTT+CGG - chr4.2:82374334-82374353 None:intergenic 30.0%
AATCAACTCAATGCTGAAAT+TGG + chr4.2:82373689-82373708 MS.gene92551:CDS 30.0%
AATGCATAAAGATCCCTATT+AGG - chr4.2:82375268-82375287 None:intergenic 30.0%
ACACAATTGGTATGAATTGT+TGG - chr4.2:82373484-82373503 None:intergenic 30.0%
ACTCATTGTGACACAAATTA+TGG + chr4.2:82374237-82374256 MS.gene92551:intron 30.0%
AGACCATTGAAAAAGTAAGA+TGG + chr4.2:82374733-82374752 MS.gene92551:intron 30.0%
AGCATAATCCATTTGAATAG+TGG - chr4.2:82374870-82374889 None:intergenic 30.0%
ATGCATAAAGATCCCTATTA+GGG - chr4.2:82375267-82375286 None:intergenic 30.0%
ATGTAACGGTAAGATTCAAT+TGG + chr4.2:82373299-82373318 MS.gene92551:intron 30.0%
ATTATATGGGTGCATGTAAT+CGG - chr4.2:82375359-82375378 None:intergenic 30.0%
ATTCCCACCTAAAGTTATTA+GGG - chr4.2:82372163-82372182 None:intergenic 30.0%
CAAAATAGTAGATGAAAGCT+AGG - chr4.2:82370882-82370901 None:intergenic 30.0%
CAATTACATTTAGCACACAT+GGG - chr4.2:82371674-82371693 None:intergenic 30.0%
CATGAGAAAATTAATTCCTG+TGG - chr4.2:82371199-82371218 None:intergenic 30.0%
GACACAAATTATGGATTTCT+TGG + chr4.2:82374246-82374265 MS.gene92551:intron 30.0%
GCATTAACCCTAATAACTTT+AGG + chr4.2:82372153-82372172 MS.gene92551:CDS 30.0%
GTTTGAGAATCAATTCCATA+AGG - chr4.2:82370740-82370759 None:intergenic 30.0%
TAACCCTAATAACTTTAGGT+GGG + chr4.2:82372157-82372176 MS.gene92551:CDS 30.0%
TATATTACCCTGAATCAGTT+GGG - chr4.2:82374533-82374552 None:intergenic 30.0%
TATGCTGCAATCATGTTAAA+TGG + chr4.2:82374884-82374903 MS.gene92551:intron 30.0%
TCTTAGTACACTTATTGCTA+TGG + chr4.2:82375378-82375397 MS.gene92551:CDS 30.0%
TGTATCAAAGCCCAATTTAA+AGG - chr4.2:82372648-82372667 None:intergenic 30.0%
TTAACCCTAATAACTTTAGG+TGG + chr4.2:82372156-82372175 MS.gene92551:CDS 30.0%
TTACAAATTCACGATGACTT+AGG + chr4.2:82374687-82374706 MS.gene92551:intron 30.0%
TTAGGATCCATCAAAATGTT+TGG + chr4.2:82374118-82374137 MS.gene92551:intron 30.0%
! AGTAGAATTTTCCTTTCACA+CGG + chr4.2:82371170-82371189 MS.gene92551:intron 30.0%
! ATAGGGATCTTTATGCATTT+TGG + chr4.2:82375269-82375288 MS.gene92551:CDS 30.0%
! ATTCACTGTGTTACTACTAA+TGG - chr4.2:82374594-82374613 None:intergenic 30.0%
! CTAGGTAGGTAACAAATTTT+TGG - chr4.2:82373988-82374007 None:intergenic 30.0%
! GTCACAATGAGTTGAATTTA+TGG - chr4.2:82374229-82374248 None:intergenic 30.0%
! TAAACAAAGGGAAGTACATA+AGG - chr4.2:82372306-82372325 None:intergenic 30.0%
! TAGGGATCTTTATGCATTTT+GGG + chr4.2:82375270-82375289 MS.gene92551:CDS 30.0%
! TATATGGTTATATTTGGTGG+TGG - chr4.2:82373377-82373396 None:intergenic 30.0%
! TGAGTATCGCAAAATTCTTA+TGG + chr4.2:82372269-82372288 MS.gene92551:CDS 30.0%
! TTTTTCCCACAAACTTTTGT+TGG + chr4.2:82375056-82375075 MS.gene92551:intron 30.0%
!! ACTAGTTTGTGTAGCTTTTA+GGG - chr4.2:82373154-82373173 None:intergenic 30.0%
!! GTTGTTACATCACACTTTTT+GGG + chr4.2:82372449-82372468 MS.gene92551:intron 30.0%
!! TACGGATTGGAAAAAATAGA+GGG - chr4.2:82373431-82373450 None:intergenic 30.0%
!! TTAATATGTTTAGCTCTTGG+TGG + chr4.2:82374028-82374047 MS.gene92551:intron 30.0%
!! TTTTTAACCCAACTGATTCA+GGG + chr4.2:82374523-82374542 MS.gene92551:intron 30.0%
!!! CACTTTTTGGGTCATAATAT+AGG + chr4.2:82372461-82372480 MS.gene92551:intron 30.0%
!!! TTACTTTTTCAATGGTCTCA+CGG - chr4.2:82374731-82374750 None:intergenic 30.0%
!!! TTTTTTAACCCAACTGATTC+AGG + chr4.2:82374522-82374541 MS.gene92551:intron 30.0%
AACCTATCCACGTAATATCT+TGG + chr4.2:82374476-82374495 MS.gene92551:intron 35.0%
AAGTTAGTAGCTGTTTGAAG+AGG - chr4.2:82373641-82373660 None:intergenic 35.0%
AATCATGTTAAATGGTGTGG+GGG + chr4.2:82374892-82374911 MS.gene92551:intron 35.0%
AATCCATTTGAATAGTGGTG+TGG - chr4.2:82374865-82374884 None:intergenic 35.0%
AATGTTTGGCAAGCATGTAA+CGG + chr4.2:82373285-82373304 MS.gene92551:intron 35.0%
AATTACAGTCAAGATTGCAC+TGG + chr4.2:82374973-82374992 MS.gene92551:intron 35.0%
ACATCAAAACATGCATGTTG+TGG + chr4.2:82375190-82375209 MS.gene92551:CDS 35.0%
ACTATATTTGCTTCCGTAAC+CGG + chr4.2:82372838-82372857 MS.gene92551:intron 35.0%
AGACTTAAAAGACCAACTCT+AGG - chr4.2:82374006-82374025 None:intergenic 35.0%
AGATATTACGTGGATAGGTT+TGG - chr4.2:82374476-82374495 None:intergenic 35.0%
ATCCAAGATATTACGTGGAT+AGG - chr4.2:82374481-82374500 None:intergenic 35.0%
ATGAGGAAGACAACATAATC+AGG - chr4.2:82372246-82372265 None:intergenic 35.0%
ATGCTAATTGGGCAGTAATT+CGG - chr4.2:82372062-82372081 None:intergenic 35.0%
ATTGGAATTCTCAATGACAC+TGG + chr4.2:82371087-82371106 MS.gene92551:CDS 35.0%
CAATCATGTTAAATGGTGTG+GGG + chr4.2:82374891-82374910 MS.gene92551:intron 35.0%
CAGTGAATTTGCCGTAATTA+TGG + chr4.2:82374606-82374625 MS.gene92551:intron 35.0%
CATTCCCACCTAAAGTTATT+AGG - chr4.2:82372164-82372183 None:intergenic 35.0%
CTATATTACCCTGAATCAGT+TGG - chr4.2:82374534-82374553 None:intergenic 35.0%
CTCCTAAGCCCTAATATATT+TGG + chr4.2:82372487-82372506 MS.gene92551:intron 35.0%
GAAATCCAAATGCATAGCAA+AGG - chr4.2:82373747-82373766 None:intergenic 35.0%
GACCAAATATATTAGGGCTT+AGG - chr4.2:82372492-82372511 None:intergenic 35.0%
GATATTACGTGGATAGGTTT+GGG - chr4.2:82374475-82374494 None:intergenic 35.0%
GATCCATCAAAATGTTTGGT+TGG + chr4.2:82374122-82374141 MS.gene92551:intron 35.0%
GCAATCATGTTAAATGGTGT+GGG + chr4.2:82374890-82374909 MS.gene92551:intron 35.0%
GCAATTACATTTAGCACACA+TGG - chr4.2:82371675-82371694 None:intergenic 35.0%
GCATAGATGAAGACATGATT+AGG - chr4.2:82373719-82373738 None:intergenic 35.0%
GCTTCTAACTAACATGACTA+GGG - chr4.2:82373950-82373969 None:intergenic 35.0%
GGTAAGAACACATTCAAAGT+TGG + chr4.2:82372543-82372562 MS.gene92551:intron 35.0%
GTCAAATCCAAGATATTACG+TGG - chr4.2:82374486-82374505 None:intergenic 35.0%
GTTTCTAATCCACAAGCATA+CGG + chr4.2:82373767-82373786 MS.gene92551:CDS 35.0%
TAACCACACCACTATTCAAA+TGG + chr4.2:82374859-82374878 MS.gene92551:intron 35.0%
TAGATCCTCTCATAAATGAG+AGG - chr4.2:82371639-82371658 None:intergenic 35.0%
TCGATGAACCACCATAATTA+CGG - chr4.2:82374620-82374639 None:intergenic 35.0%
TGAATTTGCCGTAATTATGG+TGG + chr4.2:82374609-82374628 MS.gene92551:intron 35.0%
TGCAATCATGTTAAATGGTG+TGG + chr4.2:82374889-82374908 MS.gene92551:intron 35.0%
TGCATAATATATGCAAGGTC+TGG + chr4.2:82372942-82372961 MS.gene92551:intron 35.0%
TGCTTCTAACTAACATGACT+AGG - chr4.2:82373951-82373970 None:intergenic 35.0%
TTAAAAGACCAACTCTAGGT+AGG - chr4.2:82374002-82374021 None:intergenic 35.0%
! AAAGGGAAGTACATAAGGAT+AGG - chr4.2:82372301-82372320 None:intergenic 35.0%
! AAATGCCTTTGCTATGCATT+TGG + chr4.2:82373739-82373758 MS.gene92551:CDS 35.0%
! ATTTGTTACCTACCTAGAGT+TGG + chr4.2:82373991-82374010 MS.gene92551:intron 35.0%
! CGTTGTTACATCACACTTTT+TGG + chr4.2:82372448-82372467 MS.gene92551:intron 35.0%
! GAGGTACTACTACATAATGA+TGG + chr4.2:82371914-82371933 MS.gene92551:intron 35.0%
! GGACTCAAATATGGTAATGT+AGG - chr4.2:82371015-82371034 None:intergenic 35.0%
! TTCTAACTTGTGCCCTAATA+GGG + chr4.2:82375252-82375271 MS.gene92551:CDS 35.0%
! TTTTGCGATACTCAGAAATG+AGG - chr4.2:82372263-82372282 None:intergenic 35.0%
!! ATTTGGTTCTCCTAAGATCT+TGG + chr4.2:82374063-82374082 MS.gene92551:intron 35.0%
!! CACTAGTTTGTGTAGCTTTT+AGG - chr4.2:82373155-82373174 None:intergenic 35.0%
!! CTCAAAGTTTTGTACACGTA+CGG - chr4.2:82371729-82371748 None:intergenic 35.0%
!! GTACGGATTGGAAAAAATAG+AGG - chr4.2:82373432-82373451 None:intergenic 35.0%
!! TTTGGTTCTCCTAAGATCTT+GGG + chr4.2:82374064-82374083 MS.gene92551:intron 35.0%
!!! GCAAGAGCATTTTTTGTGTT+TGG + chr4.2:82370650-82370669 MS.gene92551:CDS 35.0%
!!! TGGCCATCTTACTTTTTCAA+TGG - chr4.2:82374739-82374758 None:intergenic 35.0%
!!! TTTTTTTTTTTGGTGGTGGC+CGG - chr4.2:82372978-82372997 None:intergenic 35.0%
AAACATGCATGTTGTGGTCA+AGG + chr4.2:82375196-82375215 MS.gene92551:CDS 40.0%
ACTTTAAACAGTACCAGCAG+AGG + chr4.2:82372082-82372101 MS.gene92551:CDS 40.0%
AGCACTCAACTAATAAGGTC+AGG - chr4.2:82370803-82370822 None:intergenic 40.0%
ATCCACTATCCCAAGATCTT+AGG - chr4.2:82374076-82374095 None:intergenic 40.0%
CAACTCAATGCTGAAATTGG+TGG + chr4.2:82373692-82373711 MS.gene92551:CDS 40.0%
CATAGTCCAACTCCATTGTA+TGG - chr4.2:82375223-82375242 None:intergenic 40.0%
CATATTAGGAATGGTCCCTT+TGG - chr4.2:82374935-82374954 None:intergenic 40.0%
CTTTAAACAGTACCAGCAGA+GGG + chr4.2:82372083-82372102 MS.gene92551:CDS 40.0%
GATGGTGAAAGGTTGCTTAA+TGG + chr4.2:82371042-82371061 MS.gene92551:CDS 40.0%
GGAAATATACCGTATGCTTG+TGG - chr4.2:82373779-82373798 None:intergenic 40.0%
GGTGATTCTCTTGTGGATAA+TGG + chr4.2:82370671-82370690 MS.gene92551:CDS 40.0%
GGTGGCTAGGAACATTAATT+TGG + chr4.2:82374046-82374065 MS.gene92551:intron 40.0%
TAATAAGGTCAGGCATGTTG+AGG - chr4.2:82370793-82370812 None:intergenic 40.0%
TATTTGAGTCCAGAGCTTGA+TGG + chr4.2:82371024-82371043 MS.gene92551:CDS 40.0%
TCTCAAACTCATAGAGCTTC+TGG + chr4.2:82370752-82370771 MS.gene92551:CDS 40.0%
TGTGAATGTAGCTCAAGACA+TGG + chr4.2:82374280-82374299 MS.gene92551:intron 40.0%
TGTGACCTCTCATTTATGAG+AGG + chr4.2:82371631-82371650 MS.gene92551:intron 40.0%
TGTTGAAAGCAGCGCATATT+AGG + chr4.2:82373323-82373342 MS.gene92551:intron 40.0%
TTGGCTATGCAAGGAAGAAA+TGG + chr4.2:82373602-82373621 MS.gene92551:CDS 40.0%
TTGTTGAACACCAATGCTCA+AGG - chr4.2:82370624-82370643 None:intergenic 40.0%
TTTCCTTAACCAATGCTCCA+GGG - chr4.2:82372738-82372757 None:intergenic 40.0%
! AAGAGCATATTCACGAGATC+TGG - chr4.2:82372223-82372242 None:intergenic 40.0%
! AAGGTCTGGAGTTAAAATCC+CGG + chr4.2:82372956-82372975 MS.gene92551:intron 40.0%
! AATTTTGCTTCTGCTGGGAT+TGG + chr4.2:82371069-82371088 MS.gene92551:CDS 40.0%
! AGGCCAACCAAACATTTTGA+TGG - chr4.2:82374128-82374147 None:intergenic 40.0%
! ATTGGGAGCAAGAAGAGTTT+TGG + chr4.2:82373541-82373560 MS.gene92551:CDS 40.0%
! CTCTTTCTGATGGATGAAAG+GGG - chr4.2:82375297-82375316 None:intergenic 40.0%
! CTTCTAACTTGTGCCCTAAT+AGG + chr4.2:82375251-82375270 MS.gene92551:CDS 40.0%
! GCTCTTTCTGATGGATGAAA+GGG - chr4.2:82375298-82375317 None:intergenic 40.0%
! GTGCTAATTTTGCTTCTGCT+GGG + chr4.2:82371064-82371083 MS.gene92551:CDS 40.0%
! TGTGTTACTACTAATGGTCG+TGG - chr4.2:82374588-82374607 None:intergenic 40.0%
! TGTGTTTGGTGATTCTCTTG+TGG + chr4.2:82370664-82370683 MS.gene92551:CDS 40.0%
!! AAGAGTTTTGGTGACAGGAA+CGG + chr4.2:82373553-82373572 MS.gene92551:CDS 40.0%
!! AATTGACTTTTGGGGACCAA+AGG + chr4.2:82374916-82374935 MS.gene92551:intron 40.0%
!! AGTCTATTGGCTCTTTCTGA+TGG - chr4.2:82375307-82375326 None:intergenic 40.0%
!! ATTGACTTTTGGGGACCAAA+GGG + chr4.2:82374917-82374936 MS.gene92551:intron 40.0%
!! ATTTGGTGGTGGACTTTATG+TGG - chr4.2:82373366-82373385 None:intergenic 40.0%
!! CGTGCTGATTCATATCCTTA+TGG + chr4.2:82370722-82370741 MS.gene92551:CDS 40.0%
!! TCAAGCTCTGGACTCAAATA+TGG - chr4.2:82371024-82371043 None:intergenic 40.0%
!! TGTGGGGGAAATTGACTTTT+GGG + chr4.2:82374907-82374926 MS.gene92551:intron 40.0%
!!! TTTTTTTTTTGGTGGTGGCC+GGG - chr4.2:82372977-82372996 None:intergenic 40.0%
AACCTTTCACCATCAAGCTC+TGG - chr4.2:82371036-82371055 None:intergenic 45.0%
ACATAAGGCCATTGCTCTAG+TGG - chr4.2:82374759-82374778 None:intergenic 45.0%
CAAGGAAGAAATGGAGAGTG+TGG + chr4.2:82373611-82373630 MS.gene92551:CDS 45.0%
CAAGGACCATACAATGGAGT+TGG + chr4.2:82375214-82375233 MS.gene92551:CDS 45.0%
CGCACTAATTGGAGAAAGTG+AGG + chr4.2:82372110-82372129 MS.gene92551:CDS 45.0%
CTAACTAACATGACTAGGGC+CGG - chr4.2:82373946-82373965 None:intergenic 45.0%
CTCCTAAGATCTTGGGATAG+TGG + chr4.2:82374071-82374090 MS.gene92551:intron 45.0%
GTTTCCTTAACCAATGCTCC+AGG - chr4.2:82372739-82372758 None:intergenic 45.0%
TAAGATGGCCACTAGAGCAA+TGG + chr4.2:82374748-82374767 MS.gene92551:intron 45.0%
TGTGGTCAAGGACCATACAA+TGG + chr4.2:82375208-82375227 MS.gene92551:CDS 45.0%
TTAGGGCACAAGTTAGAAGC+TGG - chr4.2:82375250-82375269 None:intergenic 45.0%
TTCCTTAACCAATGCTCCAG+GGG - chr4.2:82372737-82372756 None:intergenic 45.0%
! GGCTCTTTCTGATGGATGAA+AGG - chr4.2:82375299-82375318 None:intergenic 45.0%
! GGTGCTAATTTTGCTTCTGC+TGG + chr4.2:82371063-82371082 MS.gene92551:CDS 45.0%
! GTGTTGATCACCTTGAGCAT+TGG + chr4.2:82370611-82370630 MS.gene92551:CDS 45.0%
!! AGAGTTTTGGTGACAGGAAC+GGG + chr4.2:82373554-82373573 MS.gene92551:CDS 45.0%
!! ATGTTTAGCTCTTGGTGGCT+AGG + chr4.2:82374033-82374052 MS.gene92551:intron 45.0%
!! GCAAGAAGAGTTTTGGTGAC+AGG + chr4.2:82373548-82373567 MS.gene92551:CDS 45.0%
!! GTGGGGGAAATTGACTTTTG+GGG + chr4.2:82374908-82374927 MS.gene92551:intron 45.0%
!! GTGTGGGGGAAATTGACTTT+TGG + chr4.2:82374906-82374925 MS.gene92551:intron 45.0%
!!! CTTTTTCAATGGTCTCACGG+TGG - chr4.2:82374728-82374747 None:intergenic 45.0%
!!! TAATTTAAAATTTTCTTTTT+TGG - chr4.2:82372761-82372780 None:intergenic 5.0%
AGGTTGTGTGCCAGCAGAAT+TGG + chr4.2:82373583-82373602 MS.gene92551:CDS 50.0%
CCAACTGAGCTAAGCTCACA+AGG - chr4.2:82372914-82372933 None:intergenic 50.0%
CCAGCAGAATTGGCTATGCA+AGG + chr4.2:82373593-82373612 MS.gene92551:CDS 50.0%
CCTTGCATAGCCAATTCTGC+TGG - chr4.2:82373596-82373615 None:intergenic 50.0%
CCTTGTGAGCTTAGCTCAGT+TGG + chr4.2:82372911-82372930 MS.gene92551:intron 50.0%
GCTCGACTGACACACACATA+AGG - chr4.2:82374774-82374793 None:intergenic 50.0%
GCTTCTGGTCGTTTCTCCAA+TGG + chr4.2:82370767-82370786 MS.gene92551:CDS 50.0%
GTGGATAGGTTTGGGTCAAG+TGG - chr4.2:82374467-82374486 None:intergenic 50.0%
TCACGAGATCTGGCTGAGTA+GGG - chr4.2:82372213-82372232 None:intergenic 50.0%
TCCTGTGGTTACCGTGTGAA+AGG - chr4.2:82371184-82371203 None:intergenic 50.0%
TCCTTTCACACGGTAACCAC+AGG + chr4.2:82371180-82371199 MS.gene92551:intron 50.0%
TGTGTGTCAGTCGAGCTCAT+GGG + chr4.2:82374778-82374797 MS.gene92551:intron 50.0%
TTCACGAGATCTGGCTGAGT+AGG - chr4.2:82372214-82372233 None:intergenic 50.0%
! CAGAGGGTTAGCGCACTAAT+TGG + chr4.2:82372099-82372118 MS.gene92551:CDS 50.0%
!! GTCCAGAGCTTGATGGTGAA+AGG + chr4.2:82371031-82371050 MS.gene92551:CDS 50.0%
AATGTTAACCGGTGCCCCTG+AGG - chr4.2:82372866-82372885 None:intergenic 55.0%
CAGCACGAGCAGTAGTAGCT+AGG - chr4.2:82370709-82370728 None:intergenic 55.0%
GTCAGGCATGTTGAGGCCAT+TGG - chr4.2:82370786-82370805 None:intergenic 55.0%
GTCAGTCGAGCTCATGGGTT+GGG + chr4.2:82374783-82374802 MS.gene92551:intron 55.0%
GTGTGTGTCAGTCGAGCTCA+TGG + chr4.2:82374777-82374796 MS.gene92551:intron 55.0%
GTTATGTTAACCGGTGCCCC+TGG + chr4.2:82372718-82372737 MS.gene92551:intron 55.0%
TCTGCTGGCACACAACCTAG+TGG - chr4.2:82373581-82373600 None:intergenic 55.0%
TGTCAGTCGAGCTCATGGGT+TGG + chr4.2:82374782-82374801 MS.gene92551:intron 55.0%
TTAGTGCGCTAACCCTCTGC+TGG - chr4.2:82372098-82372117 None:intergenic 55.0%
! TCAGTCGAGCTCATGGGTTG+GGG + chr4.2:82374784-82374803 MS.gene92551:intron 55.0%
!! CTCATGGGTTGGGGCCTATA+TGG + chr4.2:82374793-82374812 MS.gene92551:intron 55.0%
!! TGCCCCTGGAGCATTGGTTA+AGG + chr4.2:82372732-82372751 MS.gene92551:intron 55.0%
CTTCCGTAACCGGTGCCTCA+GGG + chr4.2:82372848-82372867 MS.gene92551:intron 60.0%
GTGACAGGAACGGGACCACT+AGG + chr4.2:82373563-82373582 MS.gene92551:CDS 60.0%
TTCCGTAACCGGTGCCTCAG+GGG + chr4.2:82372849-82372868 MS.gene92551:intron 60.0%
! AACCAATGCTCCAGGGGCAC+CGG - chr4.2:82372731-82372750 None:intergenic 60.0%
AACCGGTGCCCCTGGAGCAT+TGG + chr4.2:82372726-82372745 MS.gene92551:intron 65.0%
GCTTCCGTAACCGGTGCCTC+AGG + chr4.2:82372847-82372866 MS.gene92551:intron 65.0%
!! TGCCCCTGAGGCACCGGTTA+CGG - chr4.2:82372854-82372873 None:intergenic 65.0%
AACCGGTGCCCCTGAGGCAC+CGG - chr4.2:82372860-82372879 None:intergenic 70.0%
! AACCGGTGCCTCAGGGGCAC+CGG + chr4.2:82372855-82372874 MS.gene92551:intron 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 82370581 82375414 82370581 ID=MS.gene92551
chr4.2 mRNA 82370581 82375414 82370581 ID=MS.gene92551.t1;Parent=MS.gene92551
chr4.2 exon 82370581 82370812 82370581 ID=MS.gene92551.t1.exon1;Parent=MS.gene92551.t1
chr4.2 CDS 82370581 82370812 82370581 ID=cds.MS.gene92551.t1;Parent=MS.gene92551.t1
chr4.2 exon 82370992 82371119 82370992 ID=MS.gene92551.t1.exon2;Parent=MS.gene92551.t1
chr4.2 CDS 82370992 82371119 82370992 ID=cds.MS.gene92551.t1;Parent=MS.gene92551.t1
chr4.2 exon 82372048 82372290 82372048 ID=MS.gene92551.t1.exon3;Parent=MS.gene92551.t1
chr4.2 CDS 82372048 82372290 82372048 ID=cds.MS.gene92551.t1;Parent=MS.gene92551.t1
chr4.2 exon 82373530 82373788 82373530 ID=MS.gene92551.t1.exon4;Parent=MS.gene92551.t1
chr4.2 CDS 82373530 82373788 82373530 ID=cds.MS.gene92551.t1;Parent=MS.gene92551.t1
chr4.2 exon 82375182 82375414 82375182 ID=MS.gene92551.t1.exon5;Parent=MS.gene92551.t1
chr4.2 CDS 82375182 82375414 82375182 ID=cds.MS.gene92551.t1;Parent=MS.gene92551.t1
Gene Sequence

>MS.gene92551

ATGAATATTATTCCTTCAATATTTCTTTGTGTGTTGATCACCTTGAGCATTGGTGTTCAACAAATTGAAGCAAGAGCATTTTTTGTGTTTGGTGATTCTCTTGTGGATAATGGAAATAATAACTTCCTAGCTACTACTGCTCGTGCTGATTCATATCCTTATGGAATTGATTCTCAAACTCATAGAGCTTCTGGTCGTTTCTCCAATGGCCTCAACATGCCTGACCTTATTAGTTGAGTGCTCATTTTTTATATTTTTTTTTTATTTATGATTATAATTTTCAATTATATATAGTTTCCCTAGCTTTCATCTACTATTTTGTTTTAGGGCATACTTCAAAAAAAAAAAAAATCTAATATTTTGTTTTAGGGCATGTTTTAACTAAGTAGCTATAAATTATGAATGTGATAGGTGAAAAAATTGGGTCAGAGCCTACATTACCATATTTGAGTCCAGAGCTTGATGGTGAAAGGTTGCTTAATGGTGCTAATTTTGCTTCTGCTGGGATTGGAATTCTCAATGACACTGGAGTTCAGTTTGTAAGTTGCATATAATTTATAAATAATTACTTTTTTTTAACACACAAAAAAGTAGAATTTTCCTTTCACACGGTAACCACAGGAATTAATTTTCTCATGTTCATGTTTTTTAACCTAAACTCCATATATTATACTATTGGTACATTTGTTCCTAAATATATATGATTTCTTCCTTAAAAAAATGATTTTCTTGAAATCACTTGAATTAAAAAGTTTTTTTCTCTGACAAGTTGAATTAAGAAACTTAGAAGTAGTATTAAATTTGTTGATAAATTATATTTTTTTTCAAGATTAATGATAGAAAGTTAATTTAATAACTTATTTTTTCAGATTAATTGTATATATTGTTGTAAAAAAAAAATTAGAGATATTGTAGTAAGAAAAATATTAATACCACTAAAAATTTGAAAATCAATATCATATAAGACATGAAAATTAATTTTTGGATCATACATGTAGGGAGAGTGTGTTCAAAATTGAATGTGAAGAATTGAATGATATAGATTGAAAATGTGACCTCTCATTTATGAGAGGATCTACTCTCACTTATGCCCATGTGTGCTAAATGTAATTGCTTTAACATGAAAAGAAGTTAAGTTCAATATTCCGTACGTGTACAAAACTTTGAGAACAACAACAAATTGAAAGTGATTAGATATTGATTTCTTAATTACTCATTCTTATCTTAAATGAAAGTTTGTTCGATAAAAATCGATGTATTTAATCCAAAATTTTATCTGAAATTTGGATCAAATACATCAATAAAAATTTACGACTTTGGTATAAAATGAAAAGAGGTACTACTACATAATGATGGTATAATGCAAAGAAACCCTAAATTTACCTGTGTAATGAAAGAAATCAATATTGTGACACTGAACTACTACTATTCCTATTTGTATCTAATTATCTAAATATAATTTTGCAGATTAATATAATCCGAATTACTGCCCAATTAGCATACTTTAAACAGTACCAGCAGAGGGTTAGCGCACTAATTGGAGAAAGTGAGGCACAAAAATTAGTGAATCAAGCATTAACCCTAATAACTTTAGGTGGGAATGATTTTGTGAACAACTATTATTTGGTTCCCTACTCAGCCAGATCTCGTGAATATGCTCTTCCTGATTATGTTGTCTTCCTCATTTCTGAGTATCGCAAAATTCTTATGGTATGTTCCTATCCTTATGTACTTCCCTTTGTTTAATTTTCATCATTTATTTTGTTCTTAAATTTTTTCATTATTATATTGTTTTTTTTGTGCAAATCTATTGTTGTTTTTTATTTGTAGTTTATTTATTCTTTGACAAATTATTTGAGATTTATTACGTTGTTACATCACACTTTTTGGGTCATAATATAGGCTGCTCCTAAGCCCTAATATATTTGGTCAAAGTCACCATATATATAAAAACAGTTGAATGGTAAGAACACATTCAAAGTTGGTTTAAGAGTTAATGAGACCTATAGTATTTTCCTTATAAAAAAACCTACTAATATTTATTTTTTTTGTTTGAGTAAAGAACCTTTAAATTGGGCTTTGATACAAGTAGTAGAGATATTTTGTTTAAAATATTAGCTATATAGTTAATAAAAGGGTTATGTTAACCGGTGCCCCTGGAGCATTGGTTAAGGAAACCAAAAAAGAAAATTTTAAATTAAAAGAAATACTTTTTAGACTTTTAATTAGTTGATTGCACAAGTTCCAATGTGATGTTACTATATTTGCTTCCGTAACCGGTGCCTCAGGGGCACCGGTTAACATTACTCTTAATATAAAAGCTTCTTTGTCCTTGTGAGCTTAGCTCAGTTGGCATAACAATGCATAATATATGCAAGGTCTGGAGTTAAAATCCCGGCCACCACCAAAAAAAAAAAAAAAGCTTCTTTTTAGTAAAAAAAAATAAAAATAAGCTTCTTTTTTCACCCAACATTTCAAAAAAAAAAGATTATTTTTTCACCCAACATTTCTAAAGATAATGTTAGAAGAAGATCTATTTTATTTCAATATGTGGTTGTGTTTTATCACTTCCCTAAAAGCTACACAAACTAGTGTAGCAGTTGAATTCATAAATGATAATTTAGCATAAATATGAAATATTTTTTTTTATGAGGGTTAATTAGGAATTAAATGTGTTTTTTTTGGTATAGTAGATGAGTTAATTAATGTTTGGCAAGCATGTAACGGTAAGATTCAATTGGTTGTTGAAAGCAGCGCATATTAGGCCGATTAATATTAAAATCCACATAAAGTCCACCACCAAATATAACCATATAGTAAAAATGTTGAATTAATGCTCTTACATATCCCTCTATTTTTTCCAATCCGTACATCAATTATTATATTATTTCAAAATCTAGCCAACAATTCATACCAATTGTGTTATAACATTGAATTAAATGCATACAGAATCTATATGAATTGGGAGCAAGAAGAGTTTTGGTGACAGGAACGGGACCACTAGGTTGTGTGCCAGCAGAATTGGCTATGCAAGGAAGAAATGGAGAGTGTGGTGTTCCTCTTCAAACAGCTACTAACTTGTTCAATCCTCAACTTGTTCAATTGATTAATCAACTCAATGCTGAAATTGGTGGTCCTAATCATGTCTTCATCTATGCAAATGCCTTTGCTATGCATTTGGATTTCGTTTCTAATCCACAAGCATACGGTATATTTCCAATCTTAATTTGGTTAAACTTTTGCAGCTTTAATAATAATCATAGTAGTAATAATTTAAAATACAAATATTCATCTATTCGTTCAACATATGTTTTTTCTTATGTACTATATATTGTTCATATGCTAGATTTAAATTGTTAGGTCCGGCCCTAGTCATGTTAGTTAGAAGCATAGATTCACTATAGCCAAAAATTTGTTACCTACCTAGAGTTGGTCTTTTAAGTCTAATTAATATGTTTAGCTCTTGGTGGCTAGGAACATTAATTTGGTTCTCCTAAGATCTTGGGATAGTGGATGAGATTTGACTAAGTATAGCTTTTAGGATCCATCAAAATGTTTGGTTGGCCTTTTTTCATAGTATTTGAATCAACCTAGACAAACCCTATATACTTTTATTTGAGTATTAAGTTTATGATGATTTCAACTCCATAAATTCAACTCATTGTGACACAAATTATGGATTTCTTGGATTTGTTATTTTGTGAATGTAGCTCAAGACATGGATTTAAGTGTGTAATTTAAGTGTTGAATCCGAAGACTACTTCACTTTAGTTCAAGTGTCATAATTTAAAGTTATACCAACATTTTATATTAAGTGAGACTTTTCCTGAAATAAAATGTTATTAAGTTACTTTTTTATTGAAAAATTTAAAAGTTGTTTATGCCACTTGACCCAAACCTATCCACGTAATATCTTGGATTTGACAAAAAAAAAATTGTAGTTTTTTAACCCAACTGATTCAGGGTAATATAGTTAATTCTATATTCAACCCTGTCAGTGTAGACCACGACCATTAGTAGTAACACAGTGAATTTGCCGTAATTATGGTGGTTCATCGAAGATTTGACAAAATCTACTCAAATACCATATACGTATTATATAGATTTTACAAATTCACGATGACTTAGGTTAATTTCGACAAATCCACCGTGAGACCATTGAAAAAGTAAGATGGCCACTAGAGCAATGGCCTTATGTGTGTGTCAGTCGAGCTCATGGGTTGGGGCCTATATGGTTCAATATATAGTAAGAAGATATTTATGAATAACTAACTGTTTTAACCACACCACTATTCAAATGGATTATGCTGCAATCATGTTAAATGGTGTGGGGGAAATTGACTTTTGGGGACCAAAGGGACCATTCCTAATATGTAGTAGTAATATAGTATCAATTACAGTCAAGATTGCACTGGACCATGCTCATTGAAAAAACATTTATTCTATTCACCTAAACATCTAAGAAAATATGTCATTTTTTCCCACAAACTTTTGTTGGTATAATAAATGAAAAAATGCATGCTTGGTGAAACAATTTCTATGCAATATAATTATCCAATTTGAAAGTATTTATCACCATTTTTTGTTTTTTATATATGCAGGATTTGAAACATCAAAACATGCATGTTGTGGTCAAGGACCATACAATGGAGTTGGACTATGTACACCAGCTTCTAACTTGTGCCCTAATAGGGATCTTTATGCATTTTGGGACCCCTTTCATCCATCAGAAAGAGCCAATAGACTAATCGTTGATAAATTTATGACTGGAACTGCCGATTACATGCACCCATATAATCTTAGTACACTTATTGCTATGGATTCTATGACCTAA

Protein sequence

>MS.gene92551.t1

MNIIPSIFLCVLITLSIGVQQIEARAFFVFGDSLVDNGNNNFLATTARADSYPYGIDSQTHRASGRFSNGLNMPDLISEKIGSEPTLPYLSPELDGERLLNGANFASAGIGILNDTGVQFINIIRITAQLAYFKQYQQRVSALIGESEAQKLVNQALTLITLGGNDFVNNYYLVPYSARSREYALPDYVVFLISEYRKILMNLYELGARRVLVTGTGPLGCVPAELAMQGRNGECGVPLQTATNLFNPQLVQLINQLNAEIGGPNHVFIYANAFAMHLDFVSNPQAYGFETSKHACCGQGPYNGVGLCTPASNLCPNRDLYAFWDPFHPSERANRLIVDKFMTGTADYMHPYNLSTLIAMDSMT