Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062253.t1 | XP_024636901.1 | 87.5 | 281 | 27 | 3 | 1 | 280 | 1 | 274 | 3.80E-117 | 431.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062253.t1 | A0A396JQ58 | 87.5 | 281 | 27 | 3 | 1 | 280 | 1 | 274 | 2.7e-117 | 431.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050941 | MS.gene062253 | 0.81732 | 3.51E-52 | -1.69E-46 |
| MS.gene051003 | MS.gene062253 | 0.818563 | 1.84E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene062253 | 0.815606 | 8.48E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene062253 | 0.809049 | 2.29E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene062253 | 0.806616 | 7.54E-50 | -1.69E-46 |
| MS.gene052518 | MS.gene062253 | 0.802036 | 6.79E-49 | -1.69E-46 |
| MS.gene053058 | MS.gene062253 | 0.815723 | 7.99E-52 | -1.69E-46 |
| MS.gene055311 | MS.gene062253 | 0.800453 | 1.43E-48 | -1.69E-46 |
| MS.gene055313 | MS.gene062253 | 0.801315 | 9.54E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene062253 | 0.826497 | 2.63E-54 | -1.69E-46 |
| MS.gene056045 | MS.gene062253 | 0.816449 | 5.50E-52 | -1.69E-46 |
| MS.gene056181 | MS.gene062253 | 0.801612 | 8.29E-49 | -1.69E-46 |
| MS.gene056787 | MS.gene062253 | 0.81818 | 2.24E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene062253 | 0.805232 | 1.47E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062253.t1 | MTR_1g076290 | 86.559 | 372 | 14 | 4 | 1 | 343 | 1 | 365 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062253.t1 | AT1G04230 | 58.958 | 307 | 108 | 5 | 1 | 301 | 1 | 295 | 1.05e-95 | 291 |
| MS.gene062253.t1 | AT1G04230 | 58.958 | 307 | 107 | 6 | 1 | 301 | 1 | 294 | 9.50e-94 | 285 |
| MS.gene062253.t1 | AT5G43720 | 60.943 | 297 | 102 | 7 | 1 | 289 | 1 | 291 | 9.12e-89 | 273 |
Find 91 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTCTGTTTAGATGAATTT+TGG | 0.177579 | 1.1:+57160538 | None:intergenic |
| AGGAACATATTTCTCATTCT+TGG | 0.273222 | 1.1:+57162069 | None:intergenic |
| CAGTGAGGATGACGGTCTTC+TGG | 0.295263 | 1.1:-57161001 | MS.gene062253:CDS |
| CTGAGCATTGCTATGGCATT+TGG | 0.302073 | 1.1:-57159317 | MS.gene062253:CDS |
| GAGCAGGCTTCTAGTGCTTC+TGG | 0.304491 | 1.1:-57160793 | MS.gene062253:CDS |
| TGCGTTCGGCGGATCGGATT+TGG | 0.330713 | 1.1:+57163601 | None:intergenic |
| AGAAGCACAGGTGCAGAAAC+TGG | 0.342086 | 1.1:-57163474 | MS.gene062253:CDS |
| CAAACAAGTTGTCAAGGTTT+GGG | 0.346944 | 1.1:-57160569 | MS.gene062253:CDS |
| TCAAACAAGTTGTCAAGGTT+TGG | 0.348252 | 1.1:-57160570 | MS.gene062253:CDS |
| GAGCTGGTCCCTGCTCTTGA+AGG | 0.354743 | 1.1:+57160450 | None:intergenic |
| AAATATGTTCCTTTATTTAG+TGG | 0.364448 | 1.1:-57162058 | MS.gene062253:CDS |
| AGAAACGGGTTTGAATTTCT+TGG | 0.364752 | 1.1:+57163632 | None:intergenic |
| GGAACATATTTCTCATTCTT+GGG | 0.369244 | 1.1:+57162070 | None:intergenic |
| ACAAGATCTTCAATATGTTA+TGG | 0.376759 | 1.1:-57163255 | MS.gene062253:intron |
| GATATAGTTGACAAGCGAAA+TGG | 0.395656 | 1.1:-57162022 | MS.gene062253:CDS |
| GTAAGGGAACCCTCAAGATC+AGG | 0.395899 | 1.1:-57160417 | MS.gene062253:CDS |
| TTATCTGTGGCTGCTGCAAC+TGG | 0.397239 | 1.1:-57161974 | MS.gene062253:CDS |
| AACCTTGACAACTTGTTTGA+AGG | 0.398124 | 1.1:+57160573 | None:intergenic |
| TTCTATTGGTTGCAGAGAGC+AGG | 0.398930 | 1.1:-57160809 | MS.gene062253:intron |
| TCATCAGTTCCACTAAATAA+AGG | 0.410177 | 1.1:+57162049 | None:intergenic |
| TTCTCCACCTGCAGGAATGA+TGG | 0.414705 | 1.1:-57159345 | MS.gene062253:intron |
| AGCTTCTTCGTCGTCTTCTT+CGG | 0.426694 | 1.1:-57163315 | MS.gene062253:CDS |
| TTGTCAAGGTTTGGGTCTGC+AGG | 0.427670 | 1.1:-57160561 | MS.gene062253:CDS |
| TACCTTTCGGAGCATGCGTT+CGG | 0.429821 | 1.1:+57163587 | None:intergenic |
| AGCGCCATGGCTCACGGCGG+CGG | 0.433460 | 1.1:-57163711 | None:intergenic |
| GCTTCATCACTAGAACTTCC+AGG | 0.434881 | 1.1:+57160952 | None:intergenic |
| GCATTTGATGAACAAATAAA+CGG | 0.441612 | 1.1:+57159454 | None:intergenic |
| TTAAGCGAAGCAAGCTGATC+AGG | 0.442319 | 1.1:+57163278 | None:intergenic |
| ACCTTGACAACTTGTTTGAA+GGG | 0.465270 | 1.1:+57160574 | None:intergenic |
| GCAACTGGCAAGGATTTAGA+AGG | 0.471858 | 1.1:-57161959 | MS.gene062253:intron |
| TTGTCTTCAGTAGACTACTT+AGG | 0.475102 | 1.1:-57159479 | MS.gene062253:CDS |
| ATGACTGGTCCCTGATCTTG+AGG | 0.475131 | 1.1:+57160407 | None:intergenic |
| GTAAGGGAACCTTCAAGAGC+AGG | 0.475623 | 1.1:-57160459 | MS.gene062253:CDS |
| AGAAGATTAAGTTCTTTGAG+AGG | 0.482582 | 1.1:-57163382 | MS.gene062253:CDS |
| TTGTTTGAAGGGCGAGGAGG+AGG | 0.487851 | 1.1:+57160585 | None:intergenic |
| TTTGCTGTTTGATGCGTAGC+GGG | 0.489522 | 1.1:+57160500 | None:intergenic |
| TGACTGGTCCCTGATCTTGA+GGG | 0.490656 | 1.1:+57160408 | None:intergenic |
| ATATAGTTGACAAGCGAAAT+GGG | 0.491018 | 1.1:-57162021 | MS.gene062253:CDS |
| AGGAGGAGGCATCAAAGCTC+TGG | 0.493369 | 1.1:+57160599 | None:intergenic |
| GACACCGCCGCCGTGAGCCA+TGG | 0.496302 | 1.1:+57163707 | None:intergenic |
| GCAGCTCGGACTTCAGAGTA+AGG | 0.498509 | 1.1:-57160476 | MS.gene062253:CDS |
| CCAGCTCAGACTTTAGAGTA+AGG | 0.498575 | 1.1:-57160434 | MS.gene062253:CDS |
| GGGTTTGAATTTCTTGGCGG+TGG | 0.503574 | 1.1:+57163638 | None:intergenic |
| GCTTCTGGAAAAGCTGTGTC+TGG | 0.504121 | 1.1:-57160778 | MS.gene062253:CDS |
| AGCGGAGGTTAGAGAAGCAC+AGG | 0.504954 | 1.1:-57163486 | MS.gene062253:CDS |
| AAAAGTAACTCTACAACAGA+TGG | 0.517629 | 1.1:+57159500 | None:intergenic |
| CACAAGCCTCGGACAGGTCA+TGG | 0.529184 | 1.1:-57160354 | MS.gene062253:CDS |
| AACGGGTTTGAATTTCTTGG+CGG | 0.531837 | 1.1:+57163635 | None:intergenic |
| GATGCTCACAAGCCTCGGAC+AGG | 0.531903 | 1.1:-57160360 | MS.gene062253:CDS |
| GGAGCATGCGTTCGGCGGAT+CGG | 0.538352 | 1.1:+57163595 | None:intergenic |
| ACTCTGATGCTCACAAGCCT+CGG | 0.541640 | 1.1:-57160314 | MS.gene062253:CDS |
| ACTCTGATGCTCACAAGCCT+CGG | 0.546671 | 1.1:-57160365 | MS.gene062253:CDS |
| GCCCTTCAAACAAGTTGTCA+AGG | 0.549834 | 1.1:-57160575 | MS.gene062253:CDS |
| CCTTACTCTAAAGTCTGAGC+TGG | 0.551248 | 1.1:+57160434 | None:intergenic |
| GAAAACAGCGCCATGGCTCA+CGG | 0.561570 | 1.1:-57163717 | None:intergenic |
| GACAACTTGTTTGAAGGGCG+AGG | 0.563882 | 1.1:+57160579 | None:intergenic |
| TGTGCTTCTCTAACCTCCGC+TGG | 0.571924 | 1.1:+57163488 | None:intergenic |
| CGCCGAACGCATGCTCCGAA+AGG | 0.581830 | 1.1:-57163589 | MS.gene062253:intron |
| CTTTCGGAGCATGCGTTCGG+CGG | 0.585097 | 1.1:+57163590 | None:intergenic |
| AGGCTTGTGAGCATCAGAGT+TGG | 0.585984 | 1.1:+57160317 | None:intergenic |
| AGGCTTGTGAGCATCAGAGT+TGG | 0.585984 | 1.1:+57160368 | None:intergenic |
| TCAAGATCAGGGACCAGTCA+TGG | 0.587180 | 1.1:-57160405 | MS.gene062253:CDS |
| TAAGGGAACCCTCAAGATCA+GGG | 0.588906 | 1.1:-57160416 | MS.gene062253:CDS |
| TGTGGCTGCTGCAACTGGCA+AGG | 0.589859 | 1.1:-57161969 | MS.gene062253:CDS |
| ATCAAACAGCAAAAGCAGCT+CGG | 0.590417 | 1.1:-57160490 | MS.gene062253:CDS |
| CGGCGGGGTTGACCCTCTCG+CGG | 0.596977 | 1.1:+57163676 | None:intergenic |
| TGTCAACAAGCGCCGCGAGA+GGG | 0.597156 | 1.1:-57163688 | MS.gene062253:CDS |
| GGAAGCATTGAAGAAACAGC+AGG | 0.598422 | 1.1:-57163453 | MS.gene062253:CDS |
| TAAGGGAACCTTCAAGAGCA+GGG | 0.607477 | 1.1:-57160458 | MS.gene062253:CDS |
| GCTTAGACTACTACCATGAC+TGG | 0.607754 | 1.1:+57160392 | None:intergenic |
| GTGTCAACAAGCGCCGCGAG+AGG | 0.608335 | 1.1:-57163689 | MS.gene062253:CDS |
| ACACTCGCCTCGCTGTGGAA+CGG | 0.610400 | 1.1:-57163424 | MS.gene062253:CDS |
| ATTTAGTGGAACTGATGATG+CGG | 0.615716 | 1.1:-57162044 | MS.gene062253:CDS |
| GGATAAACTGAGCATTGCTA+TGG | 0.619853 | 1.1:-57159324 | MS.gene062253:CDS |
| CAGCTCAGACTTTAGAGTAA+GGG | 0.622748 | 1.1:-57160433 | MS.gene062253:CDS |
| CAGCTCGGACTTCAGAGTAA+GGG | 0.634433 | 1.1:-57160475 | MS.gene062253:CDS |
| TATTCACACTCGCCTCGCTG+TGG | 0.635745 | 1.1:-57163429 | MS.gene062253:CDS |
| AACTTGTTTGAAGGGCGAGG+AGG | 0.639014 | 1.1:+57160582 | None:intergenic |
| ATTGCAGAATTTACCAGCGG+AGG | 0.639111 | 1.1:-57163501 | MS.gene062253:intron |
| TATTATGTATCAAACAGCGT+GGG | 0.644024 | 1.1:-57159555 | MS.gene062253:CDS |
| TTAGGTCTTCTCTTTCTCCG+AGG | 0.650734 | 1.1:+57160297 | None:intergenic |
| AATTGACAGACAAAAGTACC+AGG | 0.657399 | 1.1:-57160915 | MS.gene062253:intron |
| GAGACTGGCAGTGAGGATGA+CGG | 0.672293 | 1.1:-57161009 | MS.gene062253:CDS |
| GATTGAAGAGAGGTTATCTG+TGG | 0.682349 | 1.1:-57161987 | MS.gene062253:CDS |
| ATATCTTCCGTTCCACAGCG+AGG | 0.684811 | 1.1:+57163417 | None:intergenic |
| AACAGCGCCATGGCTCACGG+CGG | 0.693190 | 1.1:-57163714 | None:intergenic |
| CTACTGCCATGACCTGTCCG+AGG | 0.693261 | 1.1:+57160348 | None:intergenic |
| GTATTATGTATCAAACAGCG+TGG | 0.694143 | 1.1:-57159556 | MS.gene062253:CDS |
| TGAATTGCAGAATTTACCAG+CGG | 0.705694 | 1.1:-57163504 | MS.gene062253:intron |
| TGCGCAAGCAGATTGAAGAG+AGG | 0.706610 | 1.1:-57161997 | MS.gene062253:CDS |
| TGTTACAGAGACTGGCAGTG+AGG | 0.712205 | 1.1:-57161016 | MS.gene062253:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTGAATTTATTTATAAAT+AGG | + | chr1.1:57162956-57162975 | None:intergenic | 10.0% |
| !! | ACTTAAATATTAAATAAAAC+AGG | - | chr1.1:57163385-57163404 | MS.gene062253:CDS | 10.0% |
| !! | AGATAGATTATAAAAAAAAA+AGG | - | chr1.1:57159928-57159947 | MS.gene062253:intron | 10.0% |
| !! | GATAGATTATAAAAAAAAAA+GGG | - | chr1.1:57159929-57159948 | MS.gene062253:intron | 10.0% |
| !! | AGCAAGTATAAATAAATATA+AGG | + | chr1.1:57160197-57160216 | None:intergenic | 15.0% |
| !! | TAAAGAAAGATGAAAAATTA+GGG | + | chr1.1:57161554-57161573 | None:intergenic | 15.0% |
| !!! | TCAAAATTAAAAGCTTTTAA+TGG | + | chr1.1:57162861-57162880 | None:intergenic | 15.0% |
| !!! | TTCTTTGTAAAATTATTTTG+TGG | - | chr1.1:57161577-57161596 | MS.gene062253:intron | 15.0% |
| !!! | TTGTATTGATTTTAGAATTA+GGG | - | chr1.1:57161187-57161206 | MS.gene062253:intron | 15.0% |
| !!! | TTTGTATTGATTTTAGAATT+AGG | - | chr1.1:57161186-57161205 | MS.gene062253:intron | 15.0% |
| !!! | TTTTGTCTTTTAAGTTTTTA+AGG | - | chr1.1:57160438-57160457 | MS.gene062253:CDS | 15.0% |
| !! | AAAGAAAGATGAAAAATTAG+GGG | + | chr1.1:57161553-57161572 | None:intergenic | 20.0% |
| !! | AACTTATAACTTATATGATG+AGG | - | chr1.1:57160773-57160792 | MS.gene062253:CDS | 20.0% |
| !! | AATAAGCTGAAAATAGTTTA+TGG | + | chr1.1:57161308-57161327 | None:intergenic | 20.0% |
| !! | ACAACAATAAATTGGAAATA+AGG | + | chr1.1:57163274-57163293 | None:intergenic | 20.0% |
| !! | ACTTATAACTTATATGATGA+GGG | - | chr1.1:57160774-57160793 | MS.gene062253:CDS | 20.0% |
| !! | ATAAATGTGCATTACAATTA+AGG | + | chr1.1:57163612-57163631 | None:intergenic | 20.0% |
| !! | ATGTATAATCTATCTTCTAA+GGG | + | chr1.1:57160125-57160144 | None:intergenic | 20.0% |
| !! | CACATTCAAATAGTTATTAT+AGG | + | chr1.1:57163116-57163135 | None:intergenic | 20.0% |
| !! | CTATAATAACTATTTGAATG+TGG | - | chr1.1:57163114-57163133 | MS.gene062253:intron | 20.0% |
| !! | GTAAAGAAAGATGAAAAATT+AGG | + | chr1.1:57161555-57161574 | None:intergenic | 20.0% |
| !! | TAAACTAAAAGATATGAGAA+AGG | + | chr1.1:57163004-57163023 | None:intergenic | 20.0% |
| !!! | AAAATAGCTTATAGCTTTTA+TGG | - | chr1.1:57160471-57160490 | MS.gene062253:CDS | 20.0% |
| !!! | AAAGCAAACTATTTTCATAT+AGG | + | chr1.1:57159887-57159906 | None:intergenic | 20.0% |
| !!! | AAATATGTTCCTTTATTTAG+TGG | - | chr1.1:57160918-57160937 | MS.gene062253:CDS | 20.0% |
| !!! | AGTGGATAAATTTTTTCTAT+TGG | - | chr1.1:57162153-57162172 | MS.gene062253:intron | 20.0% |
| !!! | ATTATGTTGTTTATGTAAAC+AGG | - | chr1.1:57161476-57161495 | MS.gene062253:intron | 20.0% |
| !!! | CTATTTGACTTTACAATTTT+TGG | - | chr1.1:57161631-57161650 | MS.gene062253:intron | 20.0% |
| !!! | GTTTTTGACAAATTATATCT+AGG | - | chr1.1:57160605-57160624 | MS.gene062253:CDS | 20.0% |
| !!! | TATTTTCAGCTTATTTTCAT+AGG | - | chr1.1:57161313-57161332 | MS.gene062253:intron | 20.0% |
| !!! | TTATGTTGTTTATGTAAACA+GGG | - | chr1.1:57161477-57161496 | MS.gene062253:intron | 20.0% |
| !!! | TTTATCACTTTCTTTTATCT+TGG | - | chr1.1:57161717-57161736 | MS.gene062253:intron | 20.0% |
| !!! | TTTCAATTTTGCATTTAAAG+TGG | - | chr1.1:57163030-57163049 | MS.gene062253:intron | 20.0% |
| ! | AAAAGATATGAGAAAGGTAA+GGG | + | chr1.1:57162998-57163017 | None:intergenic | 25.0% |
| ! | AAATCATACCTATGCTTATT+TGG | - | chr1.1:57159772-57159791 | MS.gene062253:intron | 25.0% |
| ! | AAATTATATCTAGGTCTGTT+TGG | - | chr1.1:57160614-57160633 | MS.gene062253:CDS | 25.0% |
| ! | AATAGAAACATTATATGCAG+GGG | + | chr1.1:57161778-57161797 | None:intergenic | 25.0% |
| ! | AATTAGTTGAAAACAGCTTA+TGG | + | chr1.1:57160721-57160740 | None:intergenic | 25.0% |
| ! | ACAAGATCTTCAATATGTTA+TGG | - | chr1.1:57159721-57159740 | MS.gene062253:intron | 25.0% |
| ! | AGGTGACAAAAAATATGTTT+AGG | - | chr1.1:57160311-57160330 | MS.gene062253:CDS | 25.0% |
| ! | ATAAATATAAGGCTTTGCTT+TGG | + | chr1.1:57160186-57160205 | None:intergenic | 25.0% |
| ! | ATAATGTGTGACTATCTATT+CGG | + | chr1.1:57162308-57162327 | None:intergenic | 25.0% |
| ! | ATTAAGCTGTTTATCTAAAC+AGG | - | chr1.1:57160807-57160826 | MS.gene062253:intron | 25.0% |
| ! | ATTAGTTGAAAACAGCTTAT+GGG | + | chr1.1:57160720-57160739 | None:intergenic | 25.0% |
| ! | ATTATATCGATGAAAAGTAG+TGG | - | chr1.1:57162135-57162154 | MS.gene062253:intron | 25.0% |
| ! | CAATAGAAACATTATATGCA+GGG | + | chr1.1:57161779-57161798 | None:intergenic | 25.0% |
| ! | CATGTATAATCTATCTTCTA+AGG | + | chr1.1:57160126-57160145 | None:intergenic | 25.0% |
| ! | CTAAAATCAATACAAAGCAA+TGG | + | chr1.1:57161182-57161201 | None:intergenic | 25.0% |
| ! | GCATTTGATGAACAAATAAA+CGG | + | chr1.1:57163525-57163544 | None:intergenic | 25.0% |
| ! | GTGATAAACACAGAATATTA+AGG | + | chr1.1:57161705-57161724 | None:intergenic | 25.0% |
| ! | TAAAAGATATGAGAAAGGTA+AGG | + | chr1.1:57162999-57163018 | None:intergenic | 25.0% |
| ! | TAAACACAGAATATTAAGGA+AGG | + | chr1.1:57161701-57161720 | None:intergenic | 25.0% |
| ! | TAATTACCTTTCATTCTAAC+TGG | - | chr1.1:57162769-57162788 | MS.gene062253:intron | 25.0% |
| ! | TCACTTATGATTGTATGATA+AGG | - | chr1.1:57162885-57162904 | MS.gene062253:intron | 25.0% |
| ! | TGTATAATCTATCTTCTAAG+GGG | + | chr1.1:57160124-57160143 | None:intergenic | 25.0% |
| ! | TTAAGCTGTTTATCTAAACA+GGG | - | chr1.1:57160808-57160827 | MS.gene062253:intron | 25.0% |
| ! | TTATTATAGGCATTTACACA+TGG | + | chr1.1:57163103-57163122 | None:intergenic | 25.0% |
| !! | AAAATATGTTTAGGTTCTGT+CGG | - | chr1.1:57160320-57160339 | MS.gene062253:CDS | 25.0% |
| !! | AATATGTCTTTCAGTGTTTT+AGG | - | chr1.1:57160291-57160310 | MS.gene062253:CDS | 25.0% |
| !! | ATCTCTGTTTAGATGAATTT+TGG | + | chr1.1:57162441-57162460 | None:intergenic | 25.0% |
| !! | TATTTATTTATACTTGCTGC+TGG | - | chr1.1:57160199-57160218 | MS.gene062253:intron | 25.0% |
| !! | TTGTTGACATTTTATCAAAC+AGG | + | chr1.1:57161927-57161946 | None:intergenic | 25.0% |
| !! | TTGTTGTTGATGTATTATGT+TGG | - | chr1.1:57161083-57161102 | MS.gene062253:intron | 25.0% |
| !! | TTTCCAATTTATTGTTGTTG+TGG | - | chr1.1:57163276-57163295 | MS.gene062253:CDS | 25.0% |
| !!! | AAAGTTGAGACTTTTTTAAG+TGG | - | chr1.1:57162819-57162838 | MS.gene062253:intron | 25.0% |
| !!! | AGTTATCTCAACAAGTTTTT+TGG | - | chr1.1:57162111-57162130 | MS.gene062253:intron | 25.0% |
| !!! | TAAAGTCAAACTGTTTTTGT+AGG | + | chr1.1:57161354-57161373 | None:intergenic | 25.0% |
| !!! | TTTTAGAATTAGGGTTTGTT+TGG | - | chr1.1:57161196-57161215 | MS.gene062253:intron | 25.0% |
| AAAACCAAGCACTTGAAATA+AGG | + | chr1.1:57161810-57161829 | None:intergenic | 30.0% | |
| AAAAGTAACTCTACAACAGA+TGG | + | chr1.1:57163479-57163498 | None:intergenic | 30.0% | |
| AAACCAAGCACTTGAAATAA+GGG | + | chr1.1:57161809-57161828 | None:intergenic | 30.0% | |
| AAATAGGAATGCATTTCAAG+AGG | + | chr1.1:57162940-57162959 | None:intergenic | 30.0% | |
| AAATCTGCCTCTACAAAAAT+GGG | + | chr1.1:57162354-57162373 | None:intergenic | 30.0% | |
| AAGTTTCCAGTTAGAATGAA+AGG | + | chr1.1:57162778-57162797 | None:intergenic | 30.0% | |
| AATAGGAATGCATTTCAAGA+GGG | + | chr1.1:57162939-57162958 | None:intergenic | 30.0% | |
| AATCATGAGAATATGATGAC+AGG | - | chr1.1:57163200-57163219 | MS.gene062253:intron | 30.0% | |
| AGAAGATTAAGTTCTTTGAG+AGG | - | chr1.1:57159594-57159613 | MS.gene062253:intron | 30.0% | |
| AGAGAATAAATAACCGAATC+AGG | + | chr1.1:57159446-57159465 | None:intergenic | 30.0% | |
| AGGAACATATTTCTCATTCT+TGG | + | chr1.1:57160910-57160929 | None:intergenic | 30.0% | |
| ATAAAAAAAAAAGGGCAACC+CGG | - | chr1.1:57159937-57159956 | MS.gene062253:intron | 30.0% | |
| ATACCTATGCTTATTTGGAT+TGG | - | chr1.1:57159777-57159796 | MS.gene062253:intron | 30.0% | |
| ATATAGTTGACAAGCGAAAT+GGG | - | chr1.1:57160955-57160974 | MS.gene062253:CDS | 30.0% | |
| ATTGCTAGTTGTTACTCTTA+CGG | + | chr1.1:57162254-57162273 | None:intergenic | 30.0% | |
| GAGAATAAATAACCGAATCA+GGG | + | chr1.1:57159445-57159464 | None:intergenic | 30.0% | |
| GATAGTTACTGTGTTCAATA+TGG | + | chr1.1:57163331-57163350 | None:intergenic | 30.0% | |
| GCAATAGAAACATTATATGC+AGG | + | chr1.1:57161780-57161799 | None:intergenic | 30.0% | |
| GCTTATTCGAGCTTATTTAT+TGG | - | chr1.1:57159799-57159818 | MS.gene062253:intron | 30.0% | |
| GGAACATATTTCTCATTCTT+GGG | + | chr1.1:57160909-57160928 | None:intergenic | 30.0% | |
| GTTTATGGACATATCATAAG+AGG | + | chr1.1:57161293-57161312 | None:intergenic | 30.0% | |
| TAAGCTGTTTATCTAAACAG+GGG | - | chr1.1:57160809-57160828 | MS.gene062253:intron | 30.0% | |
| TAAGGATTTACTCTTATCAC+TGG | - | chr1.1:57162903-57162922 | MS.gene062253:intron | 30.0% | |
| TATTATGTATCAAACAGCGT+GGG | - | chr1.1:57163421-57163440 | MS.gene062253:CDS | 30.0% | |
| TCATCAGTTCCACTAAATAA+AGG | + | chr1.1:57160930-57160949 | None:intergenic | 30.0% | |
| TTGAGAGGAGAAAAATTGAA+CGG | - | chr1.1:57159609-57159628 | MS.gene062253:intron | 30.0% | |
| TTGCCACAACAACAATAAAT+TGG | + | chr1.1:57163282-57163301 | None:intergenic | 30.0% | |
| TTGTTGATGTATTATGTTGG+TGG | - | chr1.1:57161086-57161105 | MS.gene062253:intron | 30.0% | |
| ! | ATCAATTGATTGAAAGTGCA+GGG | + | chr1.1:57161669-57161688 | None:intergenic | 30.0% |
| ! | CACTTTCTTTTATCTTGGTT+TGG | - | chr1.1:57161722-57161741 | MS.gene062253:intron | 30.0% |
| ! | TGACATTTTATCAAACAGGA+AGG | + | chr1.1:57161923-57161942 | None:intergenic | 30.0% |
| !! | CAATTTTGCATTTAAAGTGG+TGG | - | chr1.1:57163033-57163052 | MS.gene062253:intron | 30.0% |
| !!! | AGCAAAGATGTTTTAGTACT+TGG | - | chr1.1:57162086-57162105 | MS.gene062253:intron | 30.0% |
| !!! | ATTTGGTTTTTGAGAGAAAC+GGG | + | chr1.1:57159361-57159380 | None:intergenic | 30.0% |
| !!! | CACTTATGTTTTTTGTGTTC+AGG | - | chr1.1:57162971-57162990 | MS.gene062253:intron | 30.0% |
| !!! | GATGATGATTTTTTTCTTCC+TGG | - | chr1.1:57162006-57162025 | MS.gene062253:CDS | 30.0% |
| !!! | GATTTGGTTTTTGAGAGAAA+CGG | + | chr1.1:57159362-57159381 | None:intergenic | 30.0% |
| !!! | GCAAAGATGTTTTAGTACTT+GGG | - | chr1.1:57162087-57162106 | MS.gene062253:intron | 30.0% |
| AAGCCAATCCAAATAAGCAT+AGG | + | chr1.1:57159783-57159802 | None:intergenic | 35.0% | |
| AAGTGCTTGGGAAATTGTTT+GGG | - | chr1.1:57160373-57160392 | MS.gene062253:CDS | 35.0% | |
| ACCTAAGAAGAAAAAGAAGC+AGG | - | chr1.1:57162696-57162715 | MS.gene062253:intron | 35.0% | |
| ACTGTCTTCCTTGAAAGAAA+GGG | - | chr1.1:57163162-57163181 | MS.gene062253:intron | 35.0% | |
| ATCAGGAGTAGAGACAATTA+AGG | + | chr1.1:57163587-57163606 | None:intergenic | 35.0% | |
| CAAACAAGTTGTCAAGGTTT+GGG | - | chr1.1:57162407-57162426 | MS.gene062253:intron | 35.0% | |
| GAAATCTGCCTCTACAAAAA+TGG | + | chr1.1:57162355-57162374 | None:intergenic | 35.0% | |
| GATATAGTTGACAAGCGAAA+TGG | - | chr1.1:57160954-57160973 | MS.gene062253:CDS | 35.0% | |
| GCATTACAATTAAGGACATC+AGG | + | chr1.1:57163604-57163623 | None:intergenic | 35.0% | |
| GGAAGTAATAGACTTGTGTA+TGG | - | chr1.1:57160231-57160250 | MS.gene062253:intron | 35.0% | |
| GTATTATGTATCAAACAGCG+TGG | - | chr1.1:57163420-57163439 | MS.gene062253:CDS | 35.0% | |
| TAAACACTTACGAGACAGTT+TGG | - | chr1.1:57159824-57159843 | MS.gene062253:intron | 35.0% | |
| TAACTCAAGTGGTTGATCTA+GGG | + | chr1.1:57161124-57161143 | None:intergenic | 35.0% | |
| TACTGTCTTCCTTGAAAGAA+AGG | - | chr1.1:57163161-57163180 | MS.gene062253:intron | 35.0% | |
| TAGAGACAATTAAGGACATC+AGG | + | chr1.1:57163579-57163598 | None:intergenic | 35.0% | |
| TATCCAAAGTGTAACTCAAG+TGG | + | chr1.1:57161135-57161154 | None:intergenic | 35.0% | |
| TCAAACAAGTTGTCAAGGTT+TGG | - | chr1.1:57162406-57162425 | MS.gene062253:intron | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr1.1:57160029-57160048 | None:intergenic | 35.0% | |
| TGAAAAATTAGGGGTTGCAT+TGG | + | chr1.1:57161544-57161563 | None:intergenic | 35.0% | |
| TGAATTGCAGAATTTACCAG+CGG | - | chr1.1:57159472-57159491 | MS.gene062253:CDS | 35.0% | |
| TTCATATCCCCTTTCTTTCA+AGG | + | chr1.1:57163173-57163192 | None:intergenic | 35.0% | |
| TTGTCTTCAGTAGACTACTT+AGG | - | chr1.1:57163497-57163516 | MS.gene062253:CDS | 35.0% | |
| ! | AAAGTGCTTGGGAAATTGTT+TGG | - | chr1.1:57160372-57160391 | MS.gene062253:CDS | 35.0% |
| ! | AACCTTGACAACTTGTTTGA+AGG | + | chr1.1:57162406-57162425 | None:intergenic | 35.0% |
| ! | AATTTCCCAAGCACTTTTGT+CGG | + | chr1.1:57160369-57160388 | None:intergenic | 35.0% |
| ! | ACCTGCTTCTTTTTCTTCTT+AGG | + | chr1.1:57162700-57162719 | None:intergenic | 35.0% |
| ! | ACCTTGACAACTTGTTTGAA+GGG | + | chr1.1:57162405-57162424 | None:intergenic | 35.0% |
| ! | ACTTGCTGCTGGAAATAAAT+AGG | - | chr1.1:57160210-57160229 | MS.gene062253:intron | 35.0% |
| ! | AGAAACGGGTTTGAATTTCT+TGG | + | chr1.1:57159347-57159366 | None:intergenic | 35.0% |
| ! | ATTAAGGGGGTTTTACCTTT+CGG | + | chr1.1:57159405-57159424 | None:intergenic | 35.0% |
| ! | ATTTAGTGGAACTGATGATG+CGG | - | chr1.1:57160932-57160951 | MS.gene062253:CDS | 35.0% |
| ! | CATTTTATCAAACAGGAAGG+AGG | + | chr1.1:57161920-57161939 | None:intergenic | 35.0% |
| ! | GATCAATTGATTGAAAGTGC+AGG | + | chr1.1:57161670-57161689 | None:intergenic | 35.0% |
| ! | TCTGTTTGAAATTGGTGACT+GGG | - | chr1.1:57161848-57161867 | MS.gene062253:intron | 35.0% |
| ! | TTACCCTTATTTCAAGTGCT+TGG | - | chr1.1:57161803-57161822 | MS.gene062253:intron | 35.0% |
| !! | AATTGACAGACAAAAGTACC+AGG | - | chr1.1:57162061-57162080 | MS.gene062253:CDS | 35.0% |
| !! | ATCTTAGCCCATTTTTGTAG+AGG | - | chr1.1:57162344-57162363 | MS.gene062253:intron | 35.0% |
| !! | TGTTTTTGTAGGAACTATCC+TGG | + | chr1.1:57161343-57161362 | None:intergenic | 35.0% |
| !!! | AACCTGATTTTTTTCATCGC+TGG | + | chr1.1:57162229-57162248 | None:intergenic | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr1.1:57160028-57160047 | MS.gene062253:intron | 35.0% |
| !!! | TTCAAGTGCTTGGTTTTAGT+TGG | - | chr1.1:57161813-57161832 | MS.gene062253:intron | 35.0% |
| AAATTGTTTGGGAGAGCTAG+TGG | - | chr1.1:57160384-57160403 | MS.gene062253:CDS | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr1.1:57160035-57160054 | None:intergenic | 40.0% | |
| AGAAACATTATATGCAGGGG+CGG | + | chr1.1:57161775-57161794 | None:intergenic | 40.0% | |
| AGACAGTTTGGTTGAGCTTA+TGG | - | chr1.1:57159836-57159855 | MS.gene062253:intron | 40.0% | |
| AGTGTAAGGGTTGGGATTAA+GGG | + | chr1.1:57159420-57159439 | None:intergenic | 40.0% | |
| AGTTAGCTCAAGCTTTACTG+TGG | - | chr1.1:57163359-57163378 | MS.gene062253:CDS | 40.0% | |
| AGTTTATCCATCATTCCTGC+AGG | + | chr1.1:57163641-57163660 | None:intergenic | 40.0% | |
| ATCAAACAGCAAAAGCAGCT+CGG | - | chr1.1:57162486-57162505 | MS.gene062253:intron | 40.0% | |
| CAACCACTTGAGTTACACTT+TGG | - | chr1.1:57161129-57161148 | MS.gene062253:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr1.1:57160034-57160053 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr1.1:57160003-57160022 | None:intergenic | 40.0% | |
| CTAAAACATCTTTGCTCACC+TGG | + | chr1.1:57162082-57162101 | None:intergenic | 40.0% | |
| CTGTCTTCCTTGAAAGAAAG+GGG | - | chr1.1:57163163-57163182 | MS.gene062253:intron | 40.0% | |
| GATTGAAGAGAGGTTATCTG+TGG | - | chr1.1:57160989-57161008 | MS.gene062253:CDS | 40.0% | |
| GTAACTCAAGTGGTTGATCT+AGG | + | chr1.1:57161125-57161144 | None:intergenic | 40.0% | |
| GTCCAGCGATGAAAAAAATC+AGG | - | chr1.1:57162224-57162243 | MS.gene062253:intron | 40.0% | |
| GTTTGGTTGAGCTTATGGAA+CGG | - | chr1.1:57159841-57159860 | MS.gene062253:intron | 40.0% | |
| TAGTGTAAGGGTTGGGATTA+AGG | + | chr1.1:57159421-57159440 | None:intergenic | 40.0% | |
| ! | AACGGGTTTGAATTTCTTGG+CGG | + | chr1.1:57159344-57159363 | None:intergenic | 40.0% |
| ! | AGACTACTTTAGGGAGCTTA+AGG | - | chr1.1:57161264-57161283 | MS.gene062253:intron | 40.0% |
| ! | AGCTGAGCTCTGTTTGAAAT+TGG | - | chr1.1:57161840-57161859 | MS.gene062253:intron | 40.0% |
| ! | CTAATTTTCGCAAGCTGTCT+AGG | - | chr1.1:57160735-57160754 | MS.gene062253:intron | 40.0% |
| ! | CTCTGTTTGAAATTGGTGAC+TGG | - | chr1.1:57161847-57161866 | MS.gene062253:intron | 40.0% |
| ! | GGAAGGAGGCATAAATACAA+AGG | + | chr1.1:57161906-57161925 | None:intergenic | 40.0% |
| ! | GGATAAACTGAGCATTGCTA+TGG | - | chr1.1:57163652-57163671 | MS.gene062253:CDS | 40.0% |
| ! | TATCTTCTAAGGGGTAACCT+TGG | + | chr1.1:57160115-57160134 | None:intergenic | 40.0% |
| !! | ATCTACCGACAAAAGTGCTT+GGG | - | chr1.1:57160361-57160380 | MS.gene062253:CDS | 40.0% |
| !! | CAGCTCAGACTTTAGAGTAA+GGG | - | chr1.1:57162543-57162562 | MS.gene062253:intron | 40.0% |
| !! | CTTATTTTCATAGGCTCTCC+AGG | - | chr1.1:57161322-57161341 | MS.gene062253:intron | 40.0% |
| !! | TATCTACCGACAAAAGTGCT+TGG | - | chr1.1:57160360-57160379 | MS.gene062253:CDS | 40.0% |
| !!! | TTTTGCTGTTTGATGCGTAG+CGG | + | chr1.1:57162480-57162499 | None:intergenic | 40.0% |
| ACTGACATAAGCACTTGCGA+GGG | - | chr1.1:57161241-57161260 | MS.gene062253:intron | 45.0% | |
| ACTGGCAAGGATTTAGAAGG+TGG | - | chr1.1:57161020-57161039 | MS.gene062253:intron | 45.0% | |
| AGCTTCTTCGTCGTCTTCTT+CGG | - | chr1.1:57159661-57159680 | MS.gene062253:intron | 45.0% | |
| ATTGCAGAATTTACCAGCGG+AGG | - | chr1.1:57159475-57159494 | MS.gene062253:CDS | 45.0% | |
| CACATTTATTCTCCACCTGC+AGG | - | chr1.1:57163623-57163642 | MS.gene062253:CDS | 45.0% | |
| CCCTTACACTAACCCTGATT+CGG | - | chr1.1:57159430-57159449 | MS.gene062253:intron | 45.0% | |
| GCAACTGGCAAGGATTTAGA+AGG | - | chr1.1:57161017-57161036 | MS.gene062253:intron | 45.0% | |
| GCCCTTCAAACAAGTTGTCA+AGG | - | chr1.1:57162401-57162420 | MS.gene062253:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr1.1:57160004-57160023 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr1.1:57160007-57160026 | None:intergenic | 45.0% | |
| GCTTAGACTACTACCATGAC+TGG | + | chr1.1:57162587-57162606 | None:intergenic | 45.0% | |
| GCTTCATCACTAGAACTTCC+AGG | + | chr1.1:57162027-57162046 | None:intergenic | 45.0% | |
| GGCGGATGGAAAAATTATCC+AGG | + | chr1.1:57161757-57161776 | None:intergenic | 45.0% | |
| GTGTAAGGGTTGGGATTAAG+GGG | + | chr1.1:57159419-57159438 | None:intergenic | 45.0% | |
| GTTGTTGTCATGTGACCGTA+AGG | + | chr1.1:57160079-57160098 | None:intergenic | 45.0% | |
| GTTGTTGTGGCAACTACGTT+TGG | - | chr1.1:57163289-57163308 | MS.gene062253:CDS | 45.0% | |
| TAAACAGGGCCATAGAACCA+GGG | - | chr1.1:57161491-57161510 | MS.gene062253:intron | 45.0% | |
| TAAGGGAACCCTCAAGATCA+GGG | - | chr1.1:57162560-57162579 | MS.gene062253:intron | 45.0% | |
| TAAGGGAACCTTCAAGAGCA+GGG | - | chr1.1:57162518-57162537 | MS.gene062253:intron | 45.0% | |
| TACTGACATAAGCACTTGCG+AGG | - | chr1.1:57161240-57161259 | MS.gene062253:intron | 45.0% | |
| TCAGCACTTGTGAGACAGTT+TGG | - | chr1.1:57160666-57160685 | MS.gene062253:intron | 45.0% | |
| TGTAAGGGTTGGGATTAAGG+GGG | + | chr1.1:57159418-57159437 | None:intergenic | 45.0% | |
| TTAAGCGAAGCAAGCTGATC+AGG | + | chr1.1:57159701-57159720 | None:intergenic | 45.0% | |
| TTAGGTCTTCTCTTTCTCCG+AGG | + | chr1.1:57162682-57162701 | None:intergenic | 45.0% | |
| TTATCCATCATTCCTGCAGG+TGG | + | chr1.1:57163638-57163657 | None:intergenic | 45.0% | |
| TTGCGAGGGAGACTACTTTA+GGG | - | chr1.1:57161255-57161274 | MS.gene062253:intron | 45.0% | |
| ! | ACCGAATCAGGGTTAGTGTA+AGG | + | chr1.1:57159434-57159453 | None:intergenic | 45.0% |
| ! | ATCAGGGTTAGTGTAAGGGT+TGG | + | chr1.1:57159429-57159448 | None:intergenic | 45.0% |
| ! | CCGAATCAGGGTTAGTGTAA+GGG | + | chr1.1:57159433-57159452 | None:intergenic | 45.0% |
| ! | CTGAGCATTGCTATGGCATT+TGG | - | chr1.1:57163659-57163678 | MS.gene062253:CDS | 45.0% |
| ! | GGTGGTTTTTCTACGGTTTG+CGG | + | chr1.1:57159323-57159342 | None:intergenic | 45.0% |
| ! | TCAGGGTTAGTGTAAGGGTT+GGG | + | chr1.1:57159428-57159447 | None:intergenic | 45.0% |
| ! | TCTTGGCGGTGGTTTTTCTA+CGG | + | chr1.1:57159330-57159349 | None:intergenic | 45.0% |
| ! | TGTGCTACTGTTACAGAGAC+TGG | - | chr1.1:57161952-57161971 | MS.gene062253:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr1.1:57160039-57160058 | MS.gene062253:intron | 45.0% |
| ! | TTCTATTGGTTGCAGAGAGC+AGG | - | chr1.1:57162167-57162186 | MS.gene062253:intron | 45.0% |
| !! | CCAGCTCAGACTTTAGAGTA+AGG | - | chr1.1:57162542-57162561 | MS.gene062253:intron | 45.0% |
| !! | CCTTACTCTAAAGTCTGAGC+TGG | + | chr1.1:57162545-57162564 | None:intergenic | 45.0% |
| !! | GGAAGCATTGAAGAAACAGC+AGG | - | chr1.1:57159523-57159542 | MS.gene062253:CDS | 45.0% |
| !! | TCTTGCGAAAGTACTGCACA+TGG | + | chr1.1:57160265-57160284 | None:intergenic | 45.0% |
| !! | TTTGCTGTTTGATGCGTAGC+GGG | + | chr1.1:57162479-57162498 | None:intergenic | 45.0% |
| !!! | TTAATTTTTTGTTATAAAAA+TGG | - | chr1.1:57160510-57160529 | MS.gene062253:CDS | 5.0% |
| AAACAGGGCCATAGAACCAG+GGG | - | chr1.1:57161492-57161511 | MS.gene062253:intron | 50.0% | |
| ACATTATATGCAGGGGCGGA+TGG | + | chr1.1:57161771-57161790 | None:intergenic | 50.0% | |
| ACTCTGATGCTCACAAGCCT+CGG | - | chr1.1:57162611-57162630 | MS.gene062253:intron | 50.0% | |
| AGGCTTGTGAGCATCAGAGT+TGG | + | chr1.1:57162611-57162630 | None:intergenic | 50.0% | |
| ATATCTTCCGTTCCACAGCG+AGG | + | chr1.1:57159562-57159581 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr1.1:57160095-57160114 | MS.gene062253:intron | 50.0% | |
| CAGCTCGGACTTCAGAGTAA+GGG | - | chr1.1:57162501-57162520 | MS.gene062253:intron | 50.0% | |
| CTTGCGAGGGAGACTACTTT+AGG | - | chr1.1:57161254-57161273 | MS.gene062253:intron | 50.0% | |
| GACTTGAACCCGTGACCTTA+CGG | - | chr1.1:57160061-57160080 | MS.gene062253:intron | 50.0% | |
| GGGTTTGAATTTCTTGGCGG+TGG | + | chr1.1:57159341-57159360 | None:intergenic | 50.0% | |
| GTAAACAGGGCCATAGAACC+AGG | - | chr1.1:57161490-57161509 | MS.gene062253:intron | 50.0% | |
| GTAAGGGAACCCTCAAGATC+AGG | - | chr1.1:57162559-57162578 | MS.gene062253:intron | 50.0% | |
| GTAAGGGAACCTTCAAGAGC+AGG | - | chr1.1:57162517-57162536 | MS.gene062253:intron | 50.0% | |
| GTCATGTGACCGTAAGGTCA+CGG | + | chr1.1:57160073-57160092 | None:intergenic | 50.0% | |
| TACCTTTCGGAGCATGCGTT+CGG | + | chr1.1:57159392-57159411 | None:intergenic | 50.0% | |
| TCAAGATCAGGGACCAGTCA+TGG | - | chr1.1:57162571-57162590 | MS.gene062253:intron | 50.0% | |
| TCATGTGACCGTAAGGTCAC+GGG | + | chr1.1:57160072-57160091 | None:intergenic | 50.0% | |
| TGCGCAAGCAGATTGAAGAG+AGG | - | chr1.1:57160979-57160998 | MS.gene062253:CDS | 50.0% | |
| TGTTACAGAGACTGGCAGTG+AGG | - | chr1.1:57161960-57161979 | MS.gene062253:CDS | 50.0% | |
| TTATCTGTGGCTGCTGCAAC+TGG | - | chr1.1:57161002-57161021 | MS.gene062253:CDS | 50.0% | |
| TTCTCCACCTGCAGGAATGA+TGG | - | chr1.1:57163631-57163650 | MS.gene062253:CDS | 50.0% | |
| TTGTCAAGGTTTGGGTCTGC+AGG | - | chr1.1:57162415-57162434 | MS.gene062253:intron | 50.0% | |
| ! | AACTTGTTTGAAGGGCGAGG+AGG | + | chr1.1:57162397-57162416 | None:intergenic | 50.0% |
| ! | AGAAGCACAGGTGCAGAAAC+TGG | - | chr1.1:57159502-57159521 | MS.gene062253:CDS | 50.0% |
| ! | AGGGGTCTTATACTTGCTGC+TGG | - | chr1.1:57160827-57160846 | MS.gene062253:intron | 50.0% |
| ! | ATGACTGGTCCCTGATCTTG+AGG | + | chr1.1:57162572-57162591 | None:intergenic | 50.0% |
| ! | GACAACTTGTTTGAAGGGCG+AGG | + | chr1.1:57162400-57162419 | None:intergenic | 50.0% |
| ! | GCTTCTGGAAAAGCTGTGTC+TGG | - | chr1.1:57162198-57162217 | MS.gene062253:intron | 50.0% |
| ! | GGTTTTTCTACGGTTTGCGG+CGG | + | chr1.1:57159320-57159339 | None:intergenic | 50.0% |
| ! | GTTTTTCTACGGTTTGCGGC+GGG | + | chr1.1:57159319-57159338 | None:intergenic | 50.0% |
| ! | TGACTGGTCCCTGATCTTGA+GGG | + | chr1.1:57162571-57162590 | None:intergenic | 50.0% |
| ! | TTTTTCTACGGTTTGCGGCG+GGG | + | chr1.1:57159318-57159337 | None:intergenic | 50.0% |
| !! | TTGGTTTGGTTGTGCACTCC+TGG | - | chr1.1:57161736-57161755 | MS.gene062253:intron | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr1.1:57160060-57160079 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATATGC+AGG | - | chr1.1:57159963-57159982 | MS.gene062253:intron | 55.0% | |
| AGCCAAGGGATGGCCTATGT+TGG | - | chr1.1:57161518-57161537 | MS.gene062253:intron | 55.0% | |
| CTGAAGCTCCCGCATATGCA+GGG | - | chr1.1:57159964-57159983 | MS.gene062253:intron | 55.0% | |
| GAGACTGGCAGTGAGGATGA+CGG | - | chr1.1:57161967-57161986 | MS.gene062253:CDS | 55.0% | |
| GAGCAGGCTTCTAGTGCTTC+TGG | - | chr1.1:57162183-57162202 | MS.gene062253:intron | 55.0% | |
| GCAGCTCGGACTTCAGAGTA+AGG | - | chr1.1:57162500-57162519 | MS.gene062253:intron | 55.0% | |
| TATTCACACTCGCCTCGCTG+TGG | - | chr1.1:57159547-57159566 | MS.gene062253:CDS | 55.0% | |
| TGTGCTTCTCTAACCTCCGC+TGG | + | chr1.1:57159491-57159510 | None:intergenic | 55.0% | |
| TTGGGAGAGCTAGTGGAGAC+AGG | - | chr1.1:57160391-57160410 | MS.gene062253:CDS | 55.0% | |
| TTGTTTGAAGGGCGAGGAGG+AGG | + | chr1.1:57162394-57162413 | None:intergenic | 55.0% | |
| ! | AGCGGAGGTTAGAGAAGCAC+AGG | - | chr1.1:57159490-57159509 | MS.gene062253:CDS | 55.0% |
| ! | CAGTGAGGATGACGGTCTTC+TGG | - | chr1.1:57161975-57161994 | MS.gene062253:CDS | 55.0% |
| ! | GGGGTTGCATTGGCCAACAT+AGG | + | chr1.1:57161534-57161553 | None:intergenic | 55.0% |
| !! | AGGAGGAGGCATCAAAGCTC+TGG | + | chr1.1:57162380-57162399 | None:intergenic | 55.0% |
| ACACTCGCCTCGCTGTGGAA+CGG | - | chr1.1:57159552-57159571 | MS.gene062253:CDS | 60.0% | |
| AGAACCAGGGGTGGAGCCAA+GGG | - | chr1.1:57161504-57161523 | MS.gene062253:intron | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr1.1:57160106-57160125 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr1.1:57159959-57159978 | None:intergenic | 60.0% | |
| CACAAGCCTCGGACAGGTCA+TGG | - | chr1.1:57162622-57162641 | MS.gene062253:intron | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr1.1:57159976-57159995 | MS.gene062253:intron | 60.0% | |
| CTACTGCCATGACCTGTCCG+AGG | + | chr1.1:57162631-57162650 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr1.1:57159976-57159995 | None:intergenic | 60.0% | |
| CTTTCGGAGCATGCGTTCGG+CGG | + | chr1.1:57159389-57159408 | None:intergenic | 60.0% | |
| GAGCTGGTCCCTGCTCTTGA+AGG | + | chr1.1:57162529-57162548 | None:intergenic | 60.0% | |
| GATGCTCACAAGCCTCGGAC+AGG | - | chr1.1:57162616-57162635 | MS.gene062253:intron | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr1.1:57159975-57159994 | MS.gene062253:intron | 60.0% | |
| GGCCAACATAGGCCATCCCT+TGG | + | chr1.1:57161523-57161542 | None:intergenic | 60.0% | |
| TAGAACCAGGGGTGGAGCCA+AGG | - | chr1.1:57161503-57161522 | MS.gene062253:intron | 60.0% | |
| TGCGTTCGGCGGATCGGATT+TGG | + | chr1.1:57159378-57159397 | None:intergenic | 60.0% | |
| TGTGGCTGCTGCAACTGGCA+AGG | - | chr1.1:57161007-57161026 | MS.gene062253:CDS | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr1.1:57159975-57159994 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr1.1:57159991-57160010 | None:intergenic | 60.0% |
| ! | TGTCAACAAGCGCCGCGAGA+GGG | - | chr1.1:57159288-57159307 | MS.gene062253:CDS | 60.0% |
| !! | TGGCTCCACCCCTGGTTCTA+TGG | + | chr1.1:57161503-57161522 | None:intergenic | 60.0% |
| CAGGGCCATAGAACCAGGGG+TGG | - | chr1.1:57161495-57161514 | MS.gene062253:intron | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr1.1:57159974-57159993 | MS.gene062253:intron | 65.0% | |
| CGCCGAACGCATGCTCCGAA+AGG | - | chr1.1:57159387-57159406 | MS.gene062253:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr1.1:57159989-57160008 | MS.gene062253:intron | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr1.1:57159970-57159989 | MS.gene062253:intron | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr1.1:57159969-57159988 | MS.gene062253:intron | 65.0% | |
| GGAGCATGCGTTCGGCGGAT+CGG | + | chr1.1:57159384-57159403 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr1.1:57159958-57159977 | None:intergenic | 65.0% | |
| ! | GTGTCAACAAGCGCCGCGAG+AGG | - | chr1.1:57159287-57159306 | MS.gene062253:CDS | 65.0% |
| CCAGGGGTGGAGCCAAGGGA+TGG | - | chr1.1:57161508-57161527 | MS.gene062253:intron | 70.0% | |
| CCATCCCTTGGCTCCACCCC+TGG | + | chr1.1:57161511-57161530 | None:intergenic | 70.0% | |
| CGGCGGGGTTGACCCTCTCG+CGG | + | chr1.1:57159303-57159322 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 57159271 | 57163727 | 57159271 | ID=MS.gene062253 |
| chr1.1 | mRNA | 57159271 | 57163727 | 57159271 | ID=MS.gene062253.t1;Parent=MS.gene062253 |
| chr1.1 | exon | 57163590 | 57163727 | 57163590 | ID=MS.gene062253.t1.exon1;Parent=MS.gene062253.t1 |
| chr1.1 | CDS | 57163590 | 57163727 | 57163590 | ID=cds.MS.gene062253.t1;Parent=MS.gene062253.t1 |
| chr1.1 | exon | 57163256 | 57163516 | 57163256 | ID=MS.gene062253.t1.exon2;Parent=MS.gene062253.t1 |
| chr1.1 | CDS | 57163256 | 57163516 | 57163256 | ID=cds.MS.gene062253.t1;Parent=MS.gene062253.t1 |
| chr1.1 | exon | 57161960 | 57162098 | 57161960 | ID=MS.gene062253.t1.exon3;Parent=MS.gene062253.t1 |
| chr1.1 | CDS | 57161960 | 57162098 | 57161960 | ID=cds.MS.gene062253.t1;Parent=MS.gene062253.t1 |
| chr1.1 | exon | 57160916 | 57161030 | 57160916 | ID=MS.gene062253.t1.exon4;Parent=MS.gene062253.t1 |
| chr1.1 | CDS | 57160916 | 57161030 | 57160916 | ID=cds.MS.gene062253.t1;Parent=MS.gene062253.t1 |
| chr1.1 | exon | 57160753 | 57160816 | 57160753 | ID=MS.gene062253.t1.exon5;Parent=MS.gene062253.t1 |
| chr1.1 | CDS | 57160753 | 57160816 | 57160753 | ID=cds.MS.gene062253.t1;Parent=MS.gene062253.t1 |
| chr1.1 | exon | 57160281 | 57160634 | 57160281 | ID=MS.gene062253.t1.exon6;Parent=MS.gene062253.t1 |
| chr1.1 | CDS | 57160281 | 57160634 | 57160281 | ID=cds.MS.gene062253.t1;Parent=MS.gene062253.t1 |
| chr1.1 | exon | 57159444 | 57159591 | 57159444 | ID=MS.gene062253.t1.exon7;Parent=MS.gene062253.t1 |
| chr1.1 | CDS | 57159444 | 57159591 | 57159444 | ID=cds.MS.gene062253.t1;Parent=MS.gene062253.t1 |
| chr1.1 | exon | 57159271 | 57159353 | 57159271 | ID=MS.gene062253.t1.exon8;Parent=MS.gene062253.t1 |
| chr1.1 | CDS | 57159271 | 57159353 | 57159271 | ID=cds.MS.gene062253.t1;Parent=MS.gene062253.t1 |
| Gene Sequence |
| Protein sequence |
