Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062454.t1 | XP_003621869.1 | 98.8 | 648 | 8 | 0 | 1 | 648 | 1 | 648 | 0.00E+00 | 1218.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062454.t1 | Q9LHA8 | 92.0 | 651 | 48 | 3 | 1 | 648 | 1 | 650 | 0.0e+00 | 1147.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062454.t1 | G7KWU8 | 98.8 | 648 | 8 | 0 | 1 | 648 | 1 | 648 | 0.0e+00 | 1218.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene062454 | MS.gene006231 | PPI |
MS.gene040499 | MS.gene062454 | PPI |
MS.gene02122 | MS.gene062454 | PPI |
MS.gene062454 | MS.gene30654 | PPI |
MS.gene49154 | MS.gene062454 | PPI |
MS.gene061126 | MS.gene062454 | PPI |
MS.gene60613 | MS.gene062454 | PPI |
MS.gene62607 | MS.gene062454 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062454.t1 | MTR_7g024390 | 98.765 | 648 | 8 | 0 | 1 | 648 | 1 | 648 | 0.0 | 1318 |
MS.gene062454.t1 | MTR_7g099680 | 93.837 | 649 | 39 | 1 | 1 | 648 | 1 | 649 | 0.0 | 1256 |
MS.gene062454.t1 | MTR_7g024580 | 92.638 | 652 | 41 | 3 | 1 | 648 | 1 | 649 | 0.0 | 1238 |
MS.gene062454.t1 | MTR_4g063710 | 92.000 | 650 | 49 | 2 | 1 | 648 | 1 | 649 | 0.0 | 1221 |
MS.gene062454.t1 | MTR_4g063720 | 91.859 | 651 | 48 | 2 | 1 | 648 | 1 | 649 | 0.0 | 1220 |
MS.gene062454.t1 | MTR_4g130540 | 86.391 | 654 | 82 | 2 | 1 | 648 | 1 | 653 | 0.0 | 1149 |
MS.gene062454.t1 | MTR_6g033850 | 67.642 | 615 | 198 | 1 | 1 | 615 | 1 | 614 | 0.0 | 855 |
MS.gene062454.t1 | MTR_7g025760 | 66.023 | 621 | 207 | 3 | 1 | 619 | 1 | 619 | 0.0 | 838 |
MS.gene062454.t1 | MTR_6g033760 | 66.721 | 616 | 204 | 1 | 1 | 616 | 1 | 615 | 0.0 | 837 |
MS.gene062454.t1 | MTR_7g026030 | 65.862 | 621 | 207 | 4 | 1 | 619 | 1 | 618 | 0.0 | 833 |
MS.gene062454.t1 | MTR_2g017730 | 67.107 | 605 | 179 | 3 | 9 | 607 | 8 | 598 | 0.0 | 826 |
MS.gene062454.t1 | MTR_7g021440 | 65.528 | 615 | 208 | 3 | 1 | 613 | 1 | 613 | 0.0 | 823 |
MS.gene062454.t1 | MTR_5g066800 | 64.490 | 628 | 208 | 4 | 1 | 615 | 1 | 626 | 0.0 | 822 |
MS.gene062454.t1 | MTR_2g038260 | 66.559 | 619 | 200 | 6 | 1 | 615 | 1 | 616 | 0.0 | 822 |
MS.gene062454.t1 | MTR_2g032550 | 66.069 | 613 | 204 | 3 | 6 | 615 | 7 | 618 | 0.0 | 817 |
MS.gene062454.t1 | MTR_8g032650 | 65.862 | 621 | 207 | 4 | 1 | 619 | 1 | 618 | 0.0 | 815 |
MS.gene062454.t1 | MTR_7g025820 | 66.667 | 597 | 195 | 3 | 1 | 595 | 1 | 595 | 0.0 | 811 |
MS.gene062454.t1 | MTR_7g025720 | 64.734 | 621 | 214 | 4 | 1 | 619 | 1 | 618 | 0.0 | 809 |
MS.gene062454.t1 | MTR_7g451380 | 64.563 | 618 | 215 | 3 | 1 | 615 | 1 | 617 | 0.0 | 808 |
MS.gene062454.t1 | MTR_7g026110 | 63.695 | 617 | 218 | 5 | 1 | 615 | 1 | 613 | 0.0 | 804 |
MS.gene062454.t1 | MTR_7g025790 | 64.563 | 618 | 214 | 4 | 1 | 616 | 1 | 615 | 0.0 | 801 |
MS.gene062454.t1 | MTR_8g099795 | 65.472 | 614 | 206 | 4 | 7 | 618 | 36 | 645 | 0.0 | 801 |
MS.gene062454.t1 | MTR_8g099945 | 65.309 | 614 | 207 | 4 | 7 | 618 | 36 | 645 | 0.0 | 801 |
MS.gene062454.t1 | MTR_7g025620 | 64.918 | 610 | 209 | 4 | 1 | 608 | 1 | 607 | 0.0 | 797 |
MS.gene062454.t1 | MTR_7g024030 | 64.812 | 611 | 210 | 4 | 1 | 609 | 1 | 608 | 0.0 | 797 |
MS.gene062454.t1 | MTR_7g025630 | 64.251 | 621 | 203 | 6 | 1 | 619 | 1 | 604 | 0.0 | 791 |
MS.gene062454.t1 | MTR_7g026090 | 64.390 | 615 | 213 | 3 | 1 | 613 | 1 | 611 | 0.0 | 788 |
MS.gene062454.t1 | MTR_7g078190 | 64.000 | 625 | 216 | 7 | 1 | 619 | 1 | 622 | 0.0 | 787 |
MS.gene062454.t1 | MTR_7g029415 | 64.332 | 614 | 211 | 7 | 6 | 615 | 13 | 622 | 0.0 | 786 |
MS.gene062454.t1 | MTR_6g033870 | 63.242 | 623 | 222 | 3 | 5 | 621 | 6 | 627 | 0.0 | 784 |
MS.gene062454.t1 | MTR_2g022050 | 65.049 | 618 | 212 | 3 | 1 | 615 | 1 | 617 | 0.0 | 783 |
MS.gene062454.t1 | MTR_4g079590 | 63.502 | 611 | 218 | 4 | 1 | 608 | 1 | 609 | 0.0 | 783 |
MS.gene062454.t1 | MTR_7g025740 | 63.328 | 619 | 213 | 6 | 1 | 608 | 1 | 616 | 0.0 | 782 |
MS.gene062454.t1 | MTR_7g025770 | 62.783 | 618 | 225 | 4 | 1 | 615 | 1 | 616 | 0.0 | 779 |
MS.gene062454.t1 | MTR_8g103930 | 62.141 | 626 | 206 | 6 | 4 | 616 | 6 | 613 | 0.0 | 778 |
MS.gene062454.t1 | MTR_7g011590 | 64.019 | 617 | 205 | 5 | 1 | 615 | 1 | 602 | 0.0 | 776 |
MS.gene062454.t1 | MTR_6g033955 | 62.300 | 626 | 230 | 2 | 1 | 621 | 1 | 625 | 0.0 | 776 |
MS.gene062454.t1 | MTR_2g437440 | 63.107 | 618 | 206 | 4 | 1 | 615 | 1 | 599 | 0.0 | 776 |
MS.gene062454.t1 | MTR_7g078210 | 63.782 | 624 | 218 | 6 | 1 | 619 | 1 | 621 | 0.0 | 775 |
MS.gene062454.t1 | MTR_7g026170 | 63.328 | 619 | 220 | 6 | 1 | 615 | 1 | 616 | 0.0 | 775 |
MS.gene062454.t1 | MTR_6g033820 | 61.199 | 634 | 240 | 2 | 1 | 629 | 1 | 633 | 0.0 | 771 |
MS.gene062454.t1 | MTR_2g038270 | 61.146 | 628 | 228 | 7 | 1 | 615 | 1 | 625 | 0.0 | 763 |
MS.gene062454.t1 | MTR_7g074460 | 62.783 | 618 | 208 | 4 | 1 | 616 | 1 | 598 | 0.0 | 750 |
MS.gene062454.t1 | MTR_7g026130 | 63.124 | 621 | 217 | 7 | 1 | 613 | 1 | 617 | 0.0 | 749 |
MS.gene062454.t1 | MTR_2g032580 | 62.197 | 619 | 197 | 6 | 1 | 615 | 1 | 586 | 0.0 | 743 |
MS.gene062454.t1 | MTR_4g027145 | 59.905 | 631 | 234 | 8 | 1 | 615 | 1 | 628 | 0.0 | 736 |
MS.gene062454.t1 | MTR_7g026140 | 60.420 | 619 | 220 | 8 | 1 | 614 | 1 | 599 | 0.0 | 733 |
MS.gene062454.t1 | MTR_7g025260 | 62.478 | 573 | 211 | 3 | 49 | 619 | 21 | 591 | 0.0 | 723 |
MS.gene062454.t1 | MTR_1g017130 | 59.411 | 611 | 203 | 7 | 1 | 608 | 1 | 569 | 0.0 | 717 |
MS.gene062454.t1 | MTR_7g451360 | 58.937 | 621 | 190 | 7 | 1 | 617 | 1 | 560 | 0.0 | 701 |
MS.gene062454.t1 | MTR_6g033800 | 65.209 | 526 | 180 | 2 | 90 | 615 | 1 | 523 | 0.0 | 697 |
MS.gene062454.t1 | MTR_2g040260 | 83.000 | 400 | 66 | 1 | 1 | 400 | 1030 | 1427 | 0.0 | 689 |
MS.gene062454.t1 | MTR_2g040370 | 87.047 | 386 | 48 | 1 | 4 | 389 | 1024 | 1407 | 0.0 | 689 |
MS.gene062454.t1 | MTR_2g040370 | 85.195 | 385 | 54 | 2 | 4 | 387 | 1408 | 1790 | 0.0 | 652 |
MS.gene062454.t1 | MTR_2g040370 | 87.047 | 386 | 48 | 1 | 4 | 389 | 1024 | 1407 | 0.0 | 689 |
MS.gene062454.t1 | MTR_2g040370 | 85.233 | 386 | 54 | 2 | 4 | 388 | 1408 | 1791 | 0.0 | 654 |
MS.gene062454.t1 | MTR_2g040160 | 82.500 | 400 | 68 | 1 | 1 | 400 | 1101 | 1498 | 0.0 | 677 |
MS.gene062454.t1 | MTR_7g007000 | 56.704 | 619 | 217 | 7 | 1 | 614 | 1 | 573 | 0.0 | 676 |
MS.gene062454.t1 | MTR_7g035155 | 56.149 | 618 | 212 | 7 | 1 | 615 | 1 | 562 | 0.0 | 662 |
MS.gene062454.t1 | MTR_4g063720 | 90.411 | 365 | 29 | 3 | 287 | 648 | 217 | 578 | 0.0 | 654 |
MS.gene062454.t1 | MTR_4g063720 | 91.518 | 224 | 19 | 0 | 1 | 224 | 1 | 224 | 3.55e-143 | 429 |
MS.gene062454.t1 | MTR_2g040220 | 73.128 | 454 | 104 | 4 | 1 | 436 | 1010 | 1463 | 0.0 | 651 |
MS.gene062454.t1 | MTR_2g040220 | 56.872 | 211 | 34 | 4 | 446 | 648 | 1397 | 1558 | 1.76e-55 | 205 |
MS.gene062454.t1 | MTR_2g040350 | 79.449 | 399 | 76 | 3 | 6 | 400 | 1035 | 1431 | 0.0 | 645 |
MS.gene062454.t1 | MTR_1g041565 | 55.700 | 614 | 195 | 10 | 6 | 615 | 2 | 542 | 0.0 | 645 |
MS.gene062454.t1 | MTR_2g040350 | 79.449 | 399 | 76 | 3 | 6 | 400 | 817 | 1213 | 0.0 | 644 |
MS.gene062454.t1 | MTR_2g032160 | 73.333 | 375 | 98 | 1 | 1 | 373 | 1 | 375 | 0.0 | 582 |
MS.gene062454.t1 | MTR_2g032160 | 42.424 | 99 | 56 | 1 | 519 | 616 | 365 | 463 | 2.66e-12 | 69.7 |
MS.gene062454.t1 | MTR_2g010020 | 52.249 | 578 | 249 | 10 | 10 | 580 | 58 | 615 | 0.0 | 566 |
MS.gene062454.t1 | MTR_2g010020 | 52.249 | 578 | 249 | 10 | 10 | 580 | 57 | 614 | 0.0 | 566 |
MS.gene062454.t1 | MTR_4g092920 | 51.730 | 578 | 253 | 9 | 10 | 578 | 54 | 614 | 0.0 | 558 |
MS.gene062454.t1 | MTR_2g005690 | 47.649 | 638 | 296 | 12 | 10 | 637 | 72 | 681 | 0.0 | 533 |
MS.gene062454.t1 | MTR_6g034005 | 49.360 | 547 | 254 | 8 | 80 | 615 | 2 | 536 | 1.25e-166 | 493 |
MS.gene062454.t1 | MTR_4g092920 | 51.710 | 497 | 215 | 8 | 90 | 578 | 1 | 480 | 2.43e-163 | 479 |
MS.gene062454.t1 | MTR_1g077230 | 74.823 | 282 | 69 | 1 | 1 | 280 | 1 | 282 | 2.80e-152 | 441 |
MS.gene062454.t1 | MTR_4g088515 | 55.814 | 430 | 102 | 7 | 9 | 436 | 276 | 619 | 9.62e-146 | 437 |
MS.gene062454.t1 | MTR_6g033810 | 59.337 | 332 | 85 | 3 | 86 | 415 | 8 | 291 | 3.66e-126 | 375 |
MS.gene062454.t1 | MTR_7g026050 | 51.872 | 374 | 151 | 3 | 243 | 615 | 1 | 346 | 1.35e-125 | 375 |
MS.gene062454.t1 | MTR_7g026080 | 71.138 | 246 | 69 | 1 | 1 | 244 | 1 | 246 | 1.67e-122 | 364 |
MS.gene062454.t1 | MTR_6g033855 | 52.493 | 381 | 93 | 5 | 86 | 464 | 8 | 302 | 4.19e-120 | 360 |
MS.gene062454.t1 | MTR_2g040355 | 47.289 | 461 | 82 | 10 | 187 | 646 | 2 | 302 | 7.30e-110 | 333 |
MS.gene062454.t1 | MTR_2g031670 | 69.778 | 225 | 66 | 1 | 21 | 243 | 43 | 267 | 2.49e-108 | 331 |
MS.gene062454.t1 | MTR_2g031670 | 74.627 | 67 | 16 | 1 | 342 | 408 | 275 | 340 | 2.59e-21 | 96.3 |
MS.gene062454.t1 | MTR_5g006180 | 35.388 | 503 | 284 | 11 | 9 | 494 | 29 | 507 | 9.02e-89 | 287 |
MS.gene062454.t1 | MTR_1g077240 | 54.209 | 297 | 126 | 4 | 320 | 615 | 1 | 288 | 1.59e-87 | 275 |
MS.gene062454.t1 | MTR_2g102180 | 34.932 | 438 | 269 | 4 | 10 | 434 | 4 | 438 | 2.75e-84 | 283 |
MS.gene062454.t1 | MTR_4g012050 | 34.932 | 438 | 269 | 4 | 10 | 434 | 4 | 438 | 4.99e-83 | 279 |
MS.gene062454.t1 | MTR_1207s0010 | 71.591 | 176 | 49 | 1 | 106 | 281 | 1 | 175 | 1.00e-81 | 256 |
MS.gene062454.t1 | MTR_5g097190 | 54.545 | 253 | 66 | 4 | 4 | 254 | 153 | 358 | 1.32e-79 | 257 |
MS.gene062454.t1 | MTR_6g478100 | 60.849 | 212 | 69 | 2 | 36 | 247 | 10 | 207 | 9.72e-79 | 253 |
MS.gene062454.t1 | MTR_6g478100 | 40.000 | 95 | 56 | 1 | 515 | 608 | 208 | 302 | 4.17e-12 | 68.2 |
MS.gene062454.t1 | MTR_5g092570 | 34.660 | 427 | 270 | 4 | 10 | 430 | 4 | 427 | 1.96e-76 | 260 |
MS.gene062454.t1 | MTR_3g051300 | 33.333 | 420 | 275 | 4 | 10 | 428 | 4 | 419 | 1.13e-75 | 258 |
MS.gene062454.t1 | MTR_5g090110 | 33.874 | 493 | 273 | 13 | 9 | 482 | 28 | 486 | 5.37e-74 | 247 |
MS.gene062454.t1 | MTR_4g115780 | 34.774 | 509 | 306 | 10 | 9 | 496 | 140 | 643 | 7.73e-70 | 240 |
MS.gene062454.t1 | MTR_5g005870 | 41.718 | 326 | 178 | 5 | 265 | 587 | 35 | 351 | 1.30e-68 | 229 |
MS.gene062454.t1 | MTR_4g107920 | 32.143 | 504 | 307 | 14 | 10 | 496 | 21 | 506 | 1.20e-67 | 231 |
MS.gene062454.t1 | MTR_3g081170 | 27.947 | 526 | 334 | 13 | 10 | 498 | 27 | 544 | 1.08e-57 | 209 |
MS.gene062454.t1 | MTR_6g033910 | 47.186 | 231 | 59 | 4 | 72 | 300 | 19 | 188 | 2.36e-55 | 187 |
MS.gene062454.t1 | MTR_7g074540 | 48.756 | 201 | 102 | 1 | 416 | 616 | 1 | 200 | 3.96e-54 | 184 |
MS.gene062454.t1 | MTR_1g116250 | 44.000 | 275 | 111 | 5 | 342 | 615 | 56 | 288 | 4.23e-54 | 187 |
MS.gene062454.t1 | MTR_7g026180 | 75.630 | 119 | 29 | 0 | 74 | 192 | 21 | 139 | 2.89e-53 | 186 |
MS.gene062454.t1 | MTR_7g026180 | 35.023 | 217 | 108 | 4 | 401 | 615 | 144 | 329 | 1.45e-27 | 114 |
MS.gene062454.t1 | MTR_2g017710 | 43.077 | 260 | 63 | 6 | 223 | 480 | 17 | 193 | 5.24e-48 | 170 |
MS.gene062454.t1 | MTR_7g451390 | 48.634 | 183 | 92 | 2 | 436 | 617 | 10 | 191 | 1.49e-47 | 166 |
MS.gene062454.t1 | MTR_5g005890 | 38.326 | 227 | 89 | 4 | 72 | 297 | 5 | 181 | 1.20e-42 | 152 |
MS.gene062454.t1 | MTR_1g068900 | 51.316 | 152 | 66 | 4 | 426 | 573 | 23 | 170 | 4.14e-38 | 139 |
MS.gene062454.t1 | MTR_6g033805 | 77.465 | 71 | 16 | 0 | 1 | 71 | 1 | 71 | 8.53e-33 | 121 |
MS.gene062454.t1 | MTR_4g027235 | 73.333 | 75 | 18 | 1 | 1 | 73 | 1 | 75 | 5.46e-30 | 113 |
MS.gene062454.t1 | MTR_4g027085 | 73.333 | 75 | 18 | 1 | 1 | 73 | 1 | 75 | 5.46e-30 | 113 |
MS.gene062454.t1 | MTR_7g026190 | 57.447 | 94 | 31 | 2 | 286 | 379 | 9 | 93 | 8.06e-28 | 111 |
MS.gene062454.t1 | MTR_7g026190 | 39.496 | 119 | 69 | 2 | 498 | 616 | 94 | 209 | 1.70e-15 | 76.3 |
MS.gene062454.t1 | MTR_2g040375 | 76.667 | 60 | 14 | 0 | 398 | 457 | 51 | 110 | 6.09e-23 | 94.7 |
MS.gene062454.t1 | MTR_4g115860 | 46.739 | 92 | 49 | 0 | 396 | 487 | 29 | 120 | 2.25e-22 | 93.2 |
MS.gene062454.t1 | MTR_6g033815 | 54.930 | 71 | 32 | 0 | 524 | 594 | 1 | 71 | 4.05e-20 | 86.3 |
MS.gene062454.t1 | MTR_7g021430 | 52.000 | 75 | 36 | 0 | 213 | 287 | 1 | 75 | 2.04e-18 | 84.3 |
MS.gene062454.t1 | MTR_7g026095 | 45.652 | 92 | 50 | 0 | 482 | 573 | 256 | 347 | 5.52e-18 | 86.3 |
MS.gene062454.t1 | MTR_7g026095 | 50.000 | 88 | 28 | 2 | 86 | 173 | 189 | 260 | 8.70e-17 | 82.8 |
MS.gene062454.t1 | MTR_7g026160 | 37.500 | 120 | 49 | 4 | 296 | 389 | 72 | 191 | 2.69e-12 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062454.t1 | AT3G12580 | 93.088 | 651 | 41 | 3 | 1 | 648 | 1 | 650 | 0.0 | 1226 |
MS.gene062454.t1 | AT5G02500 | 91.398 | 651 | 53 | 1 | 1 | 648 | 1 | 651 | 0.0 | 1225 |
MS.gene062454.t1 | AT3G09440 | 91.680 | 649 | 53 | 1 | 1 | 648 | 1 | 649 | 0.0 | 1223 |
MS.gene062454.t1 | AT3G09440 | 91.680 | 649 | 53 | 1 | 1 | 648 | 1 | 649 | 0.0 | 1223 |
MS.gene062454.t1 | AT3G09440 | 91.680 | 649 | 53 | 1 | 1 | 648 | 1 | 649 | 0.0 | 1223 |
MS.gene062454.t1 | AT3G09440 | 91.680 | 649 | 53 | 1 | 1 | 648 | 1 | 649 | 0.0 | 1223 |
MS.gene062454.t1 | AT5G02490 | 89.740 | 653 | 62 | 2 | 1 | 648 | 1 | 653 | 0.0 | 1200 |
MS.gene062454.t1 | AT1G56410 | 87.722 | 619 | 74 | 1 | 1 | 619 | 1 | 617 | 0.0 | 1122 |
MS.gene062454.t1 | AT1G16030 | 83.231 | 650 | 103 | 3 | 1 | 648 | 1 | 646 | 0.0 | 1118 |
MS.gene062454.t1 | AT5G42020 | 65.064 | 624 | 211 | 5 | 7 | 627 | 35 | 654 | 0.0 | 830 |
MS.gene062454.t1 | AT5G42020 | 65.064 | 624 | 211 | 5 | 7 | 627 | 40 | 659 | 0.0 | 830 |
MS.gene062454.t1 | AT5G28540 | 65.635 | 614 | 205 | 4 | 7 | 618 | 35 | 644 | 0.0 | 827 |
MS.gene062454.t1 | AT1G09080 | 62.440 | 623 | 225 | 4 | 1 | 618 | 40 | 658 | 0.0 | 788 |
MS.gene062454.t1 | AT1G09080 | 62.440 | 623 | 225 | 4 | 1 | 618 | 30 | 648 | 0.0 | 788 |
MS.gene062454.t1 | AT5G02500 | 93.401 | 394 | 26 | 0 | 1 | 394 | 1 | 394 | 0.0 | 773 |
MS.gene062454.t1 | AT5G02500 | 77.206 | 136 | 28 | 1 | 516 | 648 | 386 | 521 | 5.63e-57 | 201 |
MS.gene062454.t1 | AT5G42020 | 58.974 | 624 | 194 | 10 | 7 | 627 | 35 | 599 | 0.0 | 701 |
MS.gene062454.t1 | AT5G09590 | 52.931 | 580 | 243 | 10 | 10 | 580 | 60 | 618 | 0.0 | 560 |
MS.gene062454.t1 | AT4G24280 | 49.186 | 614 | 286 | 11 | 10 | 617 | 81 | 674 | 0.0 | 539 |
MS.gene062454.t1 | AT5G49910 | 48.644 | 627 | 295 | 11 | 10 | 628 | 81 | 688 | 0.0 | 538 |
MS.gene062454.t1 | AT4G37910 | 51.730 | 578 | 253 | 9 | 10 | 578 | 55 | 615 | 0.0 | 531 |
MS.gene062454.t1 | AT4G37910 | 51.730 | 578 | 253 | 9 | 10 | 578 | 55 | 615 | 0.0 | 531 |
MS.gene062454.t1 | AT1G79930 | 29.468 | 733 | 416 | 14 | 10 | 648 | 4 | 729 | 6.36e-91 | 300 |
MS.gene062454.t1 | AT2G32120 | 34.961 | 512 | 305 | 9 | 9 | 508 | 30 | 525 | 3.75e-90 | 291 |
MS.gene062454.t1 | AT2G32120 | 34.961 | 512 | 305 | 9 | 9 | 508 | 30 | 525 | 3.75e-90 | 291 |
MS.gene062454.t1 | AT1G79930 | 29.059 | 733 | 419 | 15 | 10 | 648 | 4 | 729 | 1.09e-88 | 293 |
MS.gene062454.t1 | AT1G79920 | 35.845 | 438 | 265 | 4 | 10 | 434 | 4 | 438 | 1.20e-86 | 286 |
MS.gene062454.t1 | AT1G79920 | 35.845 | 438 | 265 | 4 | 10 | 434 | 4 | 438 | 1.80e-86 | 286 |
MS.gene062454.t1 | AT1G79920 | 35.845 | 438 | 265 | 4 | 10 | 434 | 4 | 438 | 1.80e-86 | 286 |
MS.gene062454.t1 | AT1G79920 | 35.845 | 438 | 265 | 4 | 10 | 434 | 4 | 438 | 1.80e-86 | 286 |
MS.gene062454.t1 | AT1G11660 | 27.111 | 675 | 405 | 11 | 10 | 619 | 4 | 656 | 3.16e-83 | 278 |
MS.gene062454.t1 | AT1G11660 | 27.111 | 675 | 405 | 11 | 10 | 619 | 4 | 656 | 3.16e-83 | 278 |
MS.gene062454.t1 | AT1G11660 | 27.111 | 675 | 405 | 11 | 10 | 619 | 4 | 656 | 3.16e-83 | 278 |
MS.gene062454.t1 | AT1G11660 | 27.187 | 640 | 379 | 11 | 45 | 619 | 2 | 619 | 4.22e-75 | 255 |
MS.gene062454.t1 | AT4G16660 | 25.802 | 717 | 420 | 18 | 3 | 612 | 44 | 755 | 1.37e-61 | 221 |
MS.gene062454.t1 | AT4G16660 | 25.941 | 717 | 419 | 18 | 3 | 612 | 20 | 731 | 5.48e-61 | 219 |
Find 147 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGGGAAAATTCGAGCTTTC+CGG | 0.198288 | 7.3:-75614188 | MS.gene062454:CDS |
GGTTCAAGATTTGTTGCTTT+TGG | 0.218491 | 7.3:-75614393 | MS.gene062454:CDS |
TAATCGACTTCTTCAATCTT+AGG | 0.232445 | 7.3:+75613648 | None:intergenic |
TCTTAAACTCTTGAACAAAA+TGG | 0.275265 | 7.3:+75614837 | None:intergenic |
AGAGAAAACTTGCTCCTTCT+TGG | 0.282443 | 7.3:+75614289 | None:intergenic |
GTTCATGATGTTGTTCTTGT+TGG | 0.297305 | 7.3:-75614563 | MS.gene062454:CDS |
TTACCGAAAACGGTGTTAAC+AGG | 0.308664 | 7.3:+75616067 | None:intergenic |
CGTTCGGTTTCCTTGATCAT+TGG | 0.309046 | 7.3:+75616165 | None:intergenic |
CGTATTCGTGTGTTGGAGTA+TGG | 0.309119 | 7.3:-75616213 | MS.gene062454:CDS |
CAAAGTTCAGCAACTGTTGC+AGG | 0.317428 | 7.3:-75614522 | MS.gene062454:CDS |
TGCTGAAGAAATTTCATCTA+TGG | 0.318039 | 7.3:-75615215 | MS.gene062454:CDS |
GGACCAGCAGTAACCTTAAA+AGG | 0.319176 | 7.3:+75615292 | None:intergenic |
CGATCAACAATGGCCGTAAA+AGG | 0.321693 | 7.3:-75616271 | None:intergenic |
TGCAACAGTTGCTGAACTTT+GGG | 0.329904 | 7.3:+75614524 | None:intergenic |
TGATACATCTTAGCAATGAT+TGG | 0.339938 | 7.3:+75613741 | None:intergenic |
TCCCAACAAGTTGTTGTCTC+TGG | 0.342182 | 7.3:+75614205 | None:intergenic |
CTCTCTCACCTTCATAAACT+TGG | 0.342869 | 7.3:+75614234 | None:intergenic |
CTGCAACAGTTGCTGAACTT+TGG | 0.347466 | 7.3:+75614523 | None:intergenic |
GATGTCACTCCATTGTCTCT+TGG | 0.351591 | 7.3:-75614371 | MS.gene062454:CDS |
CTCCTTCTTGGTTGGAATTG+TGG | 0.361148 | 7.3:+75614301 | None:intergenic |
CCATATGCAACAGCCTCGTC+TGG | 0.361349 | 7.3:+75614461 | None:intergenic |
AAGGATGCCGGTGTTATTGC+TGG | 0.363539 | 7.3:-75615085 | MS.gene062454:CDS |
AACTTAACATGGATCTGTTC+AGG | 0.378060 | 7.3:-75614643 | MS.gene062454:CDS |
ACAGATGCTAAACGTTTGAT+TGG | 0.381796 | 7.3:-75615361 | MS.gene062454:intron |
CCTCCAGCAGCAGGTGGTGC+TGG | 0.395029 | 7.3:-75613672 | MS.gene062454:CDS |
TGCGTATGGTCTTGACAAAA+AGG | 0.402154 | 7.3:-75615017 | MS.gene062454:CDS |
TCCATACCACCAGCCATATC+AGG | 0.402194 | 7.3:+75613705 | None:intergenic |
GTTGGAATTGTGGTGTTCCT+TGG | 0.407304 | 7.3:+75614311 | None:intergenic |
GGTTGATGCAAAGAATGCTT+TGG | 0.410300 | 7.3:-75613949 | MS.gene062454:CDS |
TGAGATTGATTCTTTGTTTG+AGG | 0.412145 | 7.3:-75614708 | MS.gene062454:CDS |
TCCTGCGATTGGAATAGATC+TGG | 0.413134 | 7.3:-75616242 | MS.gene062454:CDS |
AGGTGGAGGTGCTCCTGATA+TGG | 0.414427 | 7.3:-75613718 | MS.gene062454:CDS |
CGACAAAGGAAGGTTGTCTA+AGG | 0.418046 | 7.3:-75614039 | MS.gene062454:CDS |
TCTGCTGAGGACAAAACAAC+TGG | 0.419349 | 7.3:-75614089 | MS.gene062454:CDS |
TCCTGATATGGCTGGTGGTA+TGG | 0.425793 | 7.3:-75613706 | MS.gene062454:CDS |
CTTGTAGTTAACACCAATCA+TGG | 0.433031 | 7.3:+75615258 | None:intergenic |
CATGATGTTGTTCTTGTTGG+TGG | 0.435475 | 7.3:-75614560 | MS.gene062454:CDS |
GAGATTGCCGAAGCTTATCT+TGG | 0.435979 | 7.3:-75615175 | MS.gene062454:CDS |
TCTCTCAAACACTTCTCAAC+AGG | 0.442304 | 7.3:+75614608 | None:intergenic |
TTTAAGGTTACTGCTGGTCC+TGG | 0.442913 | 7.3:-75615289 | MS.gene062454:CDS |
AATAACACCGGCATCCTTTG+TGG | 0.457869 | 7.3:+75615090 | None:intergenic |
AAAACTTGCTCCTTCTTGGT+TGG | 0.457926 | 7.3:+75614293 | None:intergenic |
CTCAATCTCCGAAGTGCTCT+AGG | 0.460918 | 7.3:+75614785 | None:intergenic |
ACGATTAAAGACGAGAAGAT+TGG | 0.464209 | 7.3:-75613900 | MS.gene062454:CDS |
TAAGGAAGAAATTGAGAAGA+TGG | 0.466344 | 7.3:-75614021 | MS.gene062454:CDS |
CCAGACGAGGCTGTTGCATA+TGG | 0.468251 | 7.3:-75614461 | MS.gene062454:CDS |
AACCAGAGACAACAACTTGT+TGG | 0.470053 | 7.3:-75614207 | MS.gene062454:CDS |
ACTCATCAGCCTCTGCCAAC+TGG | 0.471841 | 7.3:+75613802 | None:intergenic |
CGGTGATGCTGCTAAGAATC+AGG | 0.474840 | 7.3:-75616101 | MS.gene062454:CDS |
GGACCAGCACCACCTGCTGC+TGG | 0.476038 | 7.3:+75613669 | None:intergenic |
CAAAATCTTCGCCACCAAGA+TGG | 0.476601 | 7.3:+75614876 | None:intergenic |
GTGTTTGAGAGATGCTAAGA+TGG | 0.478571 | 7.3:-75614597 | MS.gene062454:CDS |
ACTGCTGGTGATACCCATCT+TGG | 0.479477 | 7.3:-75614890 | MS.gene062454:CDS |
GAGATTGATTCTTTGTTTGA+GGG | 0.481259 | 7.3:-75614707 | MS.gene062454:CDS |
AGCTGAACCAAGATAAGCTT+CGG | 0.483247 | 7.3:+75615168 | None:intergenic |
AAGAACAAGAAGGATATTAG+TGG | 0.486274 | 7.3:-75614812 | MS.gene062454:CDS |
TTGCTGGTTTGAATGTTATG+AGG | 0.486524 | 7.3:-75615069 | MS.gene062454:CDS |
ACCAGAGACAACAACTTGTT+GGG | 0.487350 | 7.3:-75614206 | MS.gene062454:CDS |
CTGTTGCAGGACTTCTTCAA+TGG | 0.487768 | 7.3:-75614509 | MS.gene062454:CDS |
GAGATCATCGCCAATGATCA+AGG | 0.487997 | 7.3:-75616175 | MS.gene062454:CDS |
CAACGTAAGACGGCGTCGTT+CGG | 0.492610 | 7.3:+75616149 | None:intergenic |
CCTTCCTTTGTCGTTGGTGA+TGG | 0.494022 | 7.3:+75614049 | None:intergenic |
AAAATCTTCGCCACCAAGAT+GGG | 0.495980 | 7.3:+75614877 | None:intergenic |
GGATCTGTTCAGGAAGTGTA+TGG | 0.496195 | 7.3:-75614633 | MS.gene062454:CDS |
TTTGAAGTTAAGGCCACTGC+TGG | 0.497920 | 7.3:-75614905 | MS.gene062454:CDS |
GGAGGTGCTCCTGATATGGC+TGG | 0.498862 | 7.3:-75613714 | MS.gene062454:CDS |
ACGGGGAGCTGGAGGAATGC+CGG | 0.501984 | 7.3:+75614169 | None:intergenic |
TGAGGAACACCACGGGGAGC+TGG | 0.503287 | 7.3:+75614158 | None:intergenic |
AGAAATTGAGAAGATGGTTG+AGG | 0.504892 | 7.3:-75614015 | MS.gene062454:CDS |
AATCACCCGTGCTAGGTTTG+AGG | 0.506158 | 7.3:-75614666 | MS.gene062454:CDS |
AAAGGAGAAGGTCCTGCGAT+TGG | 0.507290 | 7.3:-75616253 | MS.gene062454:CDS |
TGACGCTGCAATTCAGTGGT+TGG | 0.507402 | 7.3:-75613832 | MS.gene062454:CDS |
ATCATTGCTAAGATGTATCA+AGG | 0.508198 | 7.3:-75613738 | MS.gene062454:CDS |
ATGCTAAACGTTTGATTGGA+AGG | 0.508528 | 7.3:-75615357 | MS.gene062454:CDS |
TCGAAGCAAACTGTGATTTG+AGG | 0.510318 | 7.3:+75614140 | None:intergenic |
AATCGAAATCTTACCGAAAA+CGG | 0.511172 | 7.3:+75616057 | None:intergenic |
GCAGGACTTCTTCAATGGTA+AGG | 0.512874 | 7.3:-75614504 | MS.gene062454:CDS |
GATGAAGTTCCTCCAGCAGC+AGG | 0.518012 | 7.3:-75613681 | MS.gene062454:CDS |
AAACAAAGAATCAATCTCAA+TGG | 0.529138 | 7.3:+75614712 | None:intergenic |
CATGATTGGTGTTAACTACA+AGG | 0.531338 | 7.3:-75615257 | MS.gene062454:CDS |
TGCTTCGACATTGATGCCAA+TGG | 0.532548 | 7.3:-75614125 | MS.gene062454:CDS |
CCCAGATCTATTCCAATCGC+AGG | 0.533456 | 7.3:+75616241 | None:intergenic |
GAGTGGTGAAGGAAATGAGA+AGG | 0.541225 | 7.3:-75614414 | MS.gene062454:CDS |
TGAGTTTGAAGATAAGATGA+AGG | 0.542099 | 7.3:-75613784 | MS.gene062454:CDS |
CGTCAAGCCACAAAGGATGC+CGG | 0.544853 | 7.3:-75615097 | MS.gene062454:CDS |
ACACCACAATCACCCGTGCT+AGG | 0.544924 | 7.3:-75614673 | MS.gene062454:CDS |
AGACAACCTTCCTTTGTCGT+TGG | 0.545078 | 7.3:+75614043 | None:intergenic |
CCTGGTGAAAAGCCCATGAT+TGG | 0.545365 | 7.3:-75615271 | MS.gene062454:CDS |
ACTGATAGTGAACGATTGAT+CGG | 0.545823 | 7.3:-75616121 | MS.gene062454:CDS |
TCTCTTGGTCTAGAAACTGC+TGG | 0.546967 | 7.3:-75614356 | MS.gene062454:CDS |
CCTGCGATTGGAATAGATCT+GGG | 0.553696 | 7.3:-75616241 | MS.gene062454:CDS |
TCATGACTGTATTGATTCCA+AGG | 0.554072 | 7.3:-75614328 | MS.gene062454:CDS |
AAACCTAGCACGGGTGATTG+TGG | 0.557012 | 7.3:+75614670 | None:intergenic |
TGAGAGTCGTTGAAGTAAGC+TGG | 0.557282 | 7.3:+75615121 | None:intergenic |
GAAATACAAGGCTGAAGATG+AGG | 0.560874 | 7.3:-75613985 | MS.gene062454:CDS |
GCTGGTGATACCCATCTTGG+TGG | 0.562989 | 7.3:-75614887 | MS.gene062454:CDS |
GTCTCTTCTTACTATTGAAG+AGG | 0.563002 | 7.3:-75614933 | MS.gene062454:CDS |
TCAGTAAAAGCAACGTAAGA+CGG | 0.567446 | 7.3:+75616139 | None:intergenic |
GTTTAAGAGGAAGAACAAGA+AGG | 0.567567 | 7.3:-75614822 | MS.gene062454:CDS |
ACTGCAGCAGCTATTGCGTA+TGG | 0.568324 | 7.3:-75615031 | MS.gene062454:CDS |
GTTTCTAGACCAAGAGACAA+TGG | 0.570014 | 7.3:+75614362 | None:intergenic |
GGAACAACGTATTCGTGTGT+TGG | 0.576773 | 7.3:-75616220 | MS.gene062454:CDS |
TCAATCTCCGAAGTGCTCTA+GGG | 0.579128 | 7.3:+75614786 | None:intergenic |
GGACAGTAACCAGTTGGCAG+AGG | 0.580101 | 7.3:-75613811 | MS.gene062454:CDS |
TAGCAATGATTGGATTGCAA+AGG | 0.581264 | 7.3:+75613751 | None:intergenic |
CACCACAATTCCAACCAAGA+AGG | 0.583129 | 7.3:-75614303 | MS.gene062454:CDS |
TAAGTTCCTCAAACCTAGCA+CGG | 0.587266 | 7.3:+75614660 | None:intergenic |
TCTCTTCTTACTATTGAAGA+GGG | 0.590747 | 7.3:-75614932 | MS.gene062454:CDS |
CATATGCAACAGCCTCGTCT+GGG | 0.593425 | 7.3:+75614462 | None:intergenic |
CCAGCACCACCTGCTGCTGG+AGG | 0.596593 | 7.3:+75613672 | None:intergenic |
GTGTTGATCCAAGTTTATGA+AGG | 0.601048 | 7.3:-75614242 | MS.gene062454:CDS |
AGAGACATTCAAGATACCAT+TGG | 0.601087 | 7.3:+75614109 | None:intergenic |
CCATCACCAACGACAAAGGA+AGG | 0.602128 | 7.3:-75614049 | MS.gene062454:CDS |
GCTAAGATGTATCAAGGTGG+AGG | 0.602520 | 7.3:-75613732 | MS.gene062454:CDS |
CTCTCAGCGTCAAGCCACAA+AGG | 0.604101 | 7.3:-75615104 | MS.gene062454:CDS |
CAAAATCGCTGCTTGTACAG+CGG | 0.607717 | 7.3:+75614436 | None:intergenic |
GTGGTTGGACAGTAACCAGT+TGG | 0.608307 | 7.3:-75613817 | MS.gene062454:CDS |
AAGTTCCTCAAACCTAGCAC+GGG | 0.609404 | 7.3:+75614661 | None:intergenic |
TTGTAGTTAACACCAATCAT+GGG | 0.609538 | 7.3:+75615259 | None:intergenic |
TGTGATTTGAGGAACACCAC+GGG | 0.611264 | 7.3:+75614151 | None:intergenic |
TACCGAAAACGGTGTTAACA+GGG | 0.612530 | 7.3:+75616068 | None:intergenic |
ATTACCATCACCAACGACAA+AGG | 0.613058 | 7.3:-75614053 | MS.gene062454:CDS |
ACAATGGCCGTAAAAGGAGA+AGG | 0.621518 | 7.3:-75616265 | MS.gene062454:CDS |
TTCAGAGTGACATGAAGTTG+TGG | 0.623777 | 7.3:-75615315 | MS.gene062454:CDS |
AAAACTACGCTTACAACATG+AGG | 0.626171 | 7.3:-75613926 | MS.gene062454:CDS |
TAGGTTTGAGGAACTTAACA+TGG | 0.627754 | 7.3:-75614654 | MS.gene062454:CDS |
GGAACACCACGGGGAGCTGG+AGG | 0.631612 | 7.3:+75614161 | None:intergenic |
TGGTGTTAACTACAAGGGTG+AGG | 0.634934 | 7.3:-75615251 | MS.gene062454:CDS |
CTGCTGAGGACAAAACAACT+GGG | 0.640141 | 7.3:-75614088 | MS.gene062454:CDS |
GTGGTAACCCTAGAGCACTT+CGG | 0.640725 | 7.3:-75614793 | MS.gene062454:CDS |
GGTGCTCCTGATATGGCTGG+TGG | 0.645251 | 7.3:-75613711 | MS.gene062454:CDS |
TAAACTTGGATCAACACACC+TGG | 0.648087 | 7.3:+75614248 | None:intergenic |
CAAGAGTATCAACCCAGACG+AGG | 0.648278 | 7.3:-75614474 | MS.gene062454:CDS |
GAAGTTCCTCCAGCAGCAGG+TGG | 0.652201 | 7.3:-75613678 | MS.gene062454:CDS |
CAATTGACGCTGCAATTCAG+TGG | 0.657113 | 7.3:-75613836 | MS.gene062454:CDS |
ACATACTCAGACAATCAACC+AGG | 0.659466 | 7.3:-75614266 | MS.gene062454:CDS |
AAGATGGGTATCACCAGCAG+TGG | 0.661313 | 7.3:+75614892 | None:intergenic |
ATGATTGGTGTTAACTACAA+GGG | 0.664773 | 7.3:-75615256 | MS.gene062454:CDS |
TGAGGAAGCAGAGAAATACA+AGG | 0.667993 | 7.3:-75613997 | MS.gene062454:CDS |
CTGTGATTTGAGGAACACCA+CGG | 0.668774 | 7.3:+75614150 | None:intergenic |
CTTGGTCTAGAAACTGCTGG+TGG | 0.672600 | 7.3:-75614353 | MS.gene062454:CDS |
TACGCAATAGCTGCTGCAGT+AGG | 0.675334 | 7.3:+75615034 | None:intergenic |
ATTCAAACCAGCAATAACAC+CGG | 0.680140 | 7.3:+75615078 | None:intergenic |
GGCATTCCTCCAGCTCCCCG+TGG | 0.680342 | 7.3:-75614167 | MS.gene062454:CDS |
TATCTTGAATGTCTCTGCTG+AGG | 0.697510 | 7.3:-75614102 | MS.gene062454:CDS |
ATTGCTAAGATGTATCAAGG+TGG | 0.733799 | 7.3:-75613735 | MS.gene062454:CDS |
GTGATTTGAGGAACACCACG+GGG | 0.760451 | 7.3:+75614152 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAAAATAAATAATTAATCTA+GGG | - | chr7.3:75613992-75614011 | MS.gene062454:CDS | 10.0% |
!! | TGAAAATAAATAATTAATCT+AGG | - | chr7.3:75613991-75614010 | MS.gene062454:CDS | 10.0% |
!! | TTTATAATGATAGAACATTA+TGG | - | chr7.3:75614299-75614318 | MS.gene062454:CDS | 15.0% |
!!! | AATGTGTTGATTTTTGATTT+GGG | - | chr7.3:75614935-75614954 | MS.gene062454:CDS | 20.0% |
!!! | ACTTTTATTCTTATTGAATG+AGG | - | chr7.3:75614182-75614201 | MS.gene062454:CDS | 20.0% |
!!! | ATTTGTTTGTTTTTTTGAGT+TGG | - | chr7.3:75614264-75614283 | MS.gene062454:CDS | 20.0% |
! | AAACAAAGAATCAATCTCAA+TGG | + | chr7.3:75615200-75615219 | None:intergenic | 25.0% |
! | ATTAGATCCCTTATATTGAA+CGG | - | chr7.3:75614214-75614233 | MS.gene062454:CDS | 25.0% |
! | TCTTAAACTCTTGAACAAAA+TGG | + | chr7.3:75615075-75615094 | None:intergenic | 25.0% |
!! | ATTTTGTTCAAGAGTTTAAG+AGG | - | chr7.3:75615074-75615093 | MS.gene062454:CDS | 25.0% |
!!! | AATTAATCTAGGGTTTTATC+TGG | - | chr7.3:75614002-75614021 | MS.gene062454:CDS | 25.0% |
!!! | GAATGTGTTGATTTTTGATT+TGG | - | chr7.3:75614934-75614953 | MS.gene062454:CDS | 25.0% |
!!! | TTTGTTTTTTTGAGTTGGAT+TGG | - | chr7.3:75614269-75614288 | MS.gene062454:CDS | 25.0% |
AAGAACAAGAAGGATATTAG+TGG | - | chr7.3:75615097-75615116 | MS.gene062454:CDS | 30.0% | |
AATCGAAATCTTACCGAAAA+CGG | + | chr7.3:75613855-75613874 | None:intergenic | 30.0% | |
ATCATTGCTAAGATGTATCA+AGG | - | chr7.3:75616171-75616190 | MS.gene062454:CDS | 30.0% | |
GAATTCACCGTTCAATATAA+GGG | + | chr7.3:75614224-75614243 | None:intergenic | 30.0% | |
TAAGGAAGAAATTGAGAAGA+TGG | - | chr7.3:75615888-75615907 | MS.gene062454:intron | 30.0% | |
TCTCTTCTTACTATTGAAGA+GGG | - | chr7.3:75614977-75614996 | MS.gene062454:CDS | 30.0% | |
TGAGTTTGAAGATAAGATGA+AGG | - | chr7.3:75616125-75616144 | MS.gene062454:CDS | 30.0% | |
TGATACATCTTAGCAATGAT+TGG | + | chr7.3:75616171-75616190 | None:intergenic | 30.0% | |
TGCTGAAGAAATTTCATCTA+TGG | - | chr7.3:75614694-75614713 | MS.gene062454:CDS | 30.0% | |
TTGTAGTTAACACCAATCAT+GGG | + | chr7.3:75614653-75614672 | None:intergenic | 30.0% | |
! | AATCTTCTTTTTGTCATCAG+GGG | + | chr7.3:75616046-75616065 | None:intergenic | 30.0% |
! | CAATCTTCTTTTTGTCATCA+GGG | + | chr7.3:75616047-75616066 | None:intergenic | 30.0% |
! | GAGATTGATTCTTTGTTTGA+GGG | - | chr7.3:75615202-75615221 | MS.gene062454:CDS | 30.0% |
! | TAATCGACTTCTTCAATCTT+AGG | + | chr7.3:75616264-75616283 | None:intergenic | 30.0% |
! | TCAATCTTCTTTTTGTCATC+AGG | + | chr7.3:75616048-75616067 | None:intergenic | 30.0% |
! | TGAGATTGATTCTTTGTTTG+AGG | - | chr7.3:75615201-75615220 | MS.gene062454:CDS | 30.0% |
! | TTAGAAGTTTGTTTGCTCAT+TGG | - | chr7.3:75614503-75614522 | MS.gene062454:CDS | 30.0% |
! | TTGTTTGCTCATTGGTTATT+TGG | - | chr7.3:75614511-75614530 | MS.gene062454:CDS | 30.0% |
!! | ATGATTGGTGTTAACTACAA+GGG | - | chr7.3:75614653-75614672 | MS.gene062454:CDS | 30.0% |
!! | CGAAGATTTTGATAACAGAA+TGG | - | chr7.3:75615045-75615064 | MS.gene062454:CDS | 30.0% |
!!! | AGAGGGTATTTTTGAAGTTA+AGG | - | chr7.3:75614994-75615013 | MS.gene062454:CDS | 30.0% |
!!! | TTTTGAGTTGGATTGGAATA+TGG | - | chr7.3:75614276-75614295 | MS.gene062454:CDS | 30.0% |
AAAACTACGCTTACAACATG+AGG | - | chr7.3:75615983-75616002 | MS.gene062454:intron | 35.0% | |
AACTTAACATGGATCTGTTC+AGG | - | chr7.3:75615266-75615285 | MS.gene062454:CDS | 35.0% | |
ACAGATGCTAAACGTTTGAT+TGG | - | chr7.3:75614548-75614567 | MS.gene062454:CDS | 35.0% | |
ACGATTAAAGACGAGAAGAT+TGG | - | chr7.3:75616009-75616028 | MS.gene062454:intron | 35.0% | |
AGAAATTGAGAAGATGGTTG+AGG | - | chr7.3:75615894-75615913 | MS.gene062454:intron | 35.0% | |
AGAGACATTCAAGATACCAT+TGG | + | chr7.3:75615803-75615822 | None:intergenic | 35.0% | |
AGATGAGGAACACAAAAAGA+AGG | - | chr7.3:75615939-75615958 | MS.gene062454:intron | 35.0% | |
ATGCTAAACGTTTGATTGGA+AGG | - | chr7.3:75614552-75614571 | MS.gene062454:CDS | 35.0% | |
ATTCAAACCAGCAATAACAC+CGG | + | chr7.3:75614834-75614853 | None:intergenic | 35.0% | |
ATTGCTAAGATGTATCAAGG+TGG | - | chr7.3:75616174-75616193 | MS.gene062454:CDS | 35.0% | |
CGAATTCACCGTTCAATATA+AGG | + | chr7.3:75614225-75614244 | None:intergenic | 35.0% | |
CTTGTAGTTAACACCAATCA+TGG | + | chr7.3:75614654-75614673 | None:intergenic | 35.0% | |
GTCTCTTCTTACTATTGAAG+AGG | - | chr7.3:75614976-75614995 | MS.gene062454:CDS | 35.0% | |
GTTCATGATGTTGTTCTTGT+TGG | - | chr7.3:75615346-75615365 | MS.gene062454:CDS | 35.0% | |
GTTTAAGAGGAAGAACAAGA+AGG | - | chr7.3:75615087-75615106 | MS.gene062454:CDS | 35.0% | |
TAGCAATGATTGGATTGCAA+AGG | + | chr7.3:75616161-75616180 | None:intergenic | 35.0% | |
TAGGTTTGAGGAACTTAACA+TGG | - | chr7.3:75615255-75615274 | MS.gene062454:CDS | 35.0% | |
TCAGTAAAAGCAACGTAAGA+CGG | + | chr7.3:75613773-75613792 | None:intergenic | 35.0% | |
! | ACTGATAGTGAACGATTGAT+CGG | - | chr7.3:75613788-75613807 | MS.gene062454:CDS | 35.0% |
! | GTGTTGATCCAAGTTTATGA+AGG | - | chr7.3:75615667-75615686 | MS.gene062454:intron | 35.0% |
!! | CATGATTGGTGTTAACTACA+AGG | - | chr7.3:75614652-75614671 | MS.gene062454:CDS | 35.0% |
!! | TCATGACTGTATTGATTCCA+AGG | - | chr7.3:75615581-75615600 | MS.gene062454:intron | 35.0% |
!! | TTGCTGGTTTGAATGTTATG+AGG | - | chr7.3:75614840-75614859 | MS.gene062454:CDS | 35.0% |
!!! | GGTTCAAGATTTGTTGCTTT+TGG | - | chr7.3:75615516-75615535 | MS.gene062454:intron | 35.0% |
!!! | GTGTTGATTTTTGATTTGGG+AGG | - | chr7.3:75614938-75614957 | MS.gene062454:CDS | 35.0% |
!!! | TTGATTTTTGATTTGGGAGG+TGG | - | chr7.3:75614941-75614960 | MS.gene062454:CDS | 35.0% |
AAAATCTTCGCCACCAAGAT+GGG | + | chr7.3:75615035-75615054 | None:intergenic | 40.0% | |
AAACCTTACCCCACTCAATT+GGG | + | chr7.3:75614347-75614366 | None:intergenic | 40.0% | |
AACCAGAGACAACAACTTGT+TGG | - | chr7.3:75615702-75615721 | MS.gene062454:intron | 40.0% | |
ACATACTCAGACAATCAACC+AGG | - | chr7.3:75615643-75615662 | MS.gene062454:intron | 40.0% | |
AGCTGAACCAAGATAAGCTT+CGG | + | chr7.3:75614744-75614763 | None:intergenic | 40.0% | |
ATTACCATCACCAACGACAA+AGG | - | chr7.3:75615856-75615875 | MS.gene062454:intron | 40.0% | |
CATGATGTTGTTCTTGTTGG+TGG | - | chr7.3:75615349-75615368 | MS.gene062454:CDS | 40.0% | |
CTCTCTCACCTTCATAAACT+TGG | + | chr7.3:75615678-75615697 | None:intergenic | 40.0% | |
GAAATACAAGGCTGAAGATG+AGG | - | chr7.3:75615924-75615943 | MS.gene062454:intron | 40.0% | |
GTGTTTGAGAGATGCTAAGA+TGG | - | chr7.3:75615312-75615331 | MS.gene062454:CDS | 40.0% | |
TAAACTTGGATCAACACACC+TGG | + | chr7.3:75615664-75615683 | None:intergenic | 40.0% | |
TAAGTTCCTCAAACCTAGCA+CGG | + | chr7.3:75615252-75615271 | None:intergenic | 40.0% | |
TATCTTGAATGTCTCTGCTG+AGG | - | chr7.3:75615807-75615826 | MS.gene062454:intron | 40.0% | |
TCGAAGCAAACTGTGATTTG+AGG | + | chr7.3:75615772-75615791 | None:intergenic | 40.0% | |
TCTCTCAAACACTTCTCAAC+AGG | + | chr7.3:75615304-75615323 | None:intergenic | 40.0% | |
TGAGGAAGCAGAGAAATACA+AGG | - | chr7.3:75615912-75615931 | MS.gene062454:intron | 40.0% | |
TGCAACAGTTGCTGAACTTT+GGG | + | chr7.3:75615388-75615407 | None:intergenic | 40.0% | |
TTCAGAGTGACATGAAGTTG+TGG | - | chr7.3:75614594-75614613 | MS.gene062454:CDS | 40.0% | |
TTGGGAAAATTCGAGCTTTC+CGG | - | chr7.3:75615721-75615740 | MS.gene062454:intron | 40.0% | |
! | AAAACTTGCTCCTTCTTGGT+TGG | + | chr7.3:75615619-75615638 | None:intergenic | 40.0% |
! | AACCCTGTTAACACCGTTTT+CGG | - | chr7.3:75613839-75613858 | MS.gene062454:CDS | 40.0% |
! | ACCAGAGACAACAACTTGTT+GGG | - | chr7.3:75615703-75615722 | MS.gene062454:intron | 40.0% |
! | AGAGAAAACTTGCTCCTTCT+TGG | + | chr7.3:75615623-75615642 | None:intergenic | 40.0% |
! | CATGAAGTTGTGGCCTTTTA+AGG | - | chr7.3:75614604-75614623 | MS.gene062454:CDS | 40.0% |
! | GGTTGATGCAAAGAATGCTT+TGG | - | chr7.3:75615960-75615979 | MS.gene062454:intron | 40.0% |
! | GTTTCTAGACCAAGAGACAA+TGG | + | chr7.3:75615550-75615569 | None:intergenic | 40.0% |
! | TACCGAAAACGGTGTTAACA+GGG | + | chr7.3:75613844-75613863 | None:intergenic | 40.0% |
! | TGCGTATGGTCTTGACAAAA+AGG | - | chr7.3:75614892-75614911 | MS.gene062454:CDS | 40.0% |
! | TTACCGAAAACGGTGTTAAC+AGG | + | chr7.3:75613845-75613864 | None:intergenic | 40.0% |
AAGTTCCTCAAACCTAGCAC+GGG | + | chr7.3:75615251-75615270 | None:intergenic | 45.0% | |
AATAACACCGGCATCCTTTG+TGG | + | chr7.3:75614822-75614841 | None:intergenic | 45.0% | |
AGACAACCTTCCTTTGTCGT+TGG | + | chr7.3:75615869-75615888 | None:intergenic | 45.0% | |
CAAAATCGCTGCTTGTACAG+CGG | + | chr7.3:75615476-75615495 | None:intergenic | 45.0% | |
CAAAATCTTCGCCACCAAGA+TGG | + | chr7.3:75615036-75615055 | None:intergenic | 45.0% | |
CAAACCTTACCCCACTCAAT+TGG | + | chr7.3:75614348-75614367 | None:intergenic | 45.0% | |
CAAAGTTCAGCAACTGTTGC+AGG | - | chr7.3:75615387-75615406 | MS.gene062454:intron | 45.0% | |
CAATTGACGCTGCAATTCAG+TGG | - | chr7.3:75616073-75616092 | MS.gene062454:CDS | 45.0% | |
CAATTGAGTGGGGTAAGGTT+TGG | - | chr7.3:75614346-75614365 | MS.gene062454:CDS | 45.0% | |
CACCACAATTCCAACCAAGA+AGG | - | chr7.3:75615606-75615625 | MS.gene062454:intron | 45.0% | |
CCTGCGATTGGAATAGATCT+GGG | - | chr7.3:75613668-75613687 | MS.gene062454:CDS | 45.0% | |
CGACAAAGGAAGGTTGTCTA+AGG | - | chr7.3:75615870-75615889 | MS.gene062454:intron | 45.0% | |
CGTATTCGTGTGTTGGAGTA+TGG | - | chr7.3:75613696-75613715 | MS.gene062454:CDS | 45.0% | |
CGTTCGGTTTCCTTGATCAT+TGG | + | chr7.3:75613747-75613766 | None:intergenic | 45.0% | |
CTCCTTCTTGGTTGGAATTG+TGG | + | chr7.3:75615611-75615630 | None:intergenic | 45.0% | |
CTGCAACAGTTGCTGAACTT+TGG | + | chr7.3:75615389-75615408 | None:intergenic | 45.0% | |
CTGCTGAGGACAAAACAACT+GGG | - | chr7.3:75615821-75615840 | MS.gene062454:intron | 45.0% | |
CTGTGATTTGAGGAACACCA+CGG | + | chr7.3:75615762-75615781 | None:intergenic | 45.0% | |
CTGTTGCAGGACTTCTTCAA+TGG | - | chr7.3:75615400-75615419 | MS.gene062454:intron | 45.0% | |
GACAAAAAGGCGACAAGTGT+TGG | - | chr7.3:75614905-75614924 | MS.gene062454:CDS | 45.0% | |
GAGATCATCGCCAATGATCA+AGG | - | chr7.3:75613734-75613753 | MS.gene062454:CDS | 45.0% | |
GAGATTGCCGAAGCTTATCT+TGG | - | chr7.3:75614734-75614753 | MS.gene062454:CDS | 45.0% | |
GAGTGGTGAAGGAAATGAGA+AGG | - | chr7.3:75615495-75615514 | MS.gene062454:intron | 45.0% | |
GATGTCACTCCATTGTCTCT+TGG | - | chr7.3:75615538-75615557 | MS.gene062454:intron | 45.0% | |
GCAGGACTTCTTCAATGGTA+AGG | - | chr7.3:75615405-75615424 | MS.gene062454:intron | 45.0% | |
GCTAAGATGTATCAAGGTGG+AGG | - | chr7.3:75616177-75616196 | MS.gene062454:CDS | 45.0% | |
GGAACAACGTATTCGTGTGT+TGG | - | chr7.3:75613689-75613708 | MS.gene062454:CDS | 45.0% | |
GGACCAGCAGTAACCTTAAA+AGG | + | chr7.3:75614620-75614639 | None:intergenic | 45.0% | |
GTTGGAATTGTGGTGTTCCT+TGG | + | chr7.3:75615601-75615620 | None:intergenic | 45.0% | |
TCCCAACAAGTTGTTGTCTC+TGG | + | chr7.3:75615707-75615726 | None:intergenic | 45.0% | |
TCCTGCGATTGGAATAGATC+TGG | - | chr7.3:75613667-75613686 | MS.gene062454:CDS | 45.0% | |
TCTCTTGGTCTAGAAACTGC+TGG | - | chr7.3:75615553-75615572 | MS.gene062454:intron | 45.0% | |
TCTGCTGAGGACAAAACAAC+TGG | - | chr7.3:75615820-75615839 | MS.gene062454:intron | 45.0% | |
TGAGAGTCGTTGAAGTAAGC+TGG | + | chr7.3:75614791-75614810 | None:intergenic | 45.0% | |
TGCTTCGACATTGATGCCAA+TGG | - | chr7.3:75615784-75615803 | MS.gene062454:intron | 45.0% | |
TGTGATTTGAGGAACACCAC+GGG | + | chr7.3:75615761-75615780 | None:intergenic | 45.0% | |
! | GGATCTGTTCAGGAAGTGTA+TGG | - | chr7.3:75615276-75615295 | MS.gene062454:CDS | 45.0% |
! | GTACAAGCAGCGATTTTGAG+TGG | - | chr7.3:75615478-75615497 | MS.gene062454:intron | 45.0% |
! | TCAATCTCCGAAGTGCTCTA+GGG | + | chr7.3:75615126-75615145 | None:intergenic | 45.0% |
! | TGGTGTTAACTACAAGGGTG+AGG | - | chr7.3:75614658-75614677 | MS.gene062454:CDS | 45.0% |
! | TTTAAGGTTACTGCTGGTCC+TGG | - | chr7.3:75614620-75614639 | MS.gene062454:CDS | 45.0% |
! | TTTGAAGTTAAGGCCACTGC+TGG | - | chr7.3:75615004-75615023 | MS.gene062454:CDS | 45.0% |
!!! | TGGCCTTTTAAGGTTACTGC+TGG | - | chr7.3:75614614-75614633 | MS.gene062454:CDS | 45.0% |
!!! | TTTTTATATTGAAATTTAAT+TGG | - | chr7.3:75614475-75614494 | MS.gene062454:CDS | 5.0% |
AAACCTAGCACGGGTGATTG+TGG | + | chr7.3:75615242-75615261 | None:intergenic | 50.0% | |
AAAGGAGAAGGTCCTGCGAT+TGG | - | chr7.3:75613656-75613675 | MS.gene062454:CDS | 50.0% | |
AAGATGGGTATCACCAGCAG+TGG | + | chr7.3:75615020-75615039 | None:intergenic | 50.0% | |
AATCACCCGTGCTAGGTTTG+AGG | - | chr7.3:75615243-75615262 | MS.gene062454:CDS | 50.0% | |
ACTGCAGCAGCTATTGCGTA+TGG | - | chr7.3:75614878-75614897 | MS.gene062454:CDS | 50.0% | |
ACTGCTGGTGATACCCATCT+TGG | - | chr7.3:75615019-75615038 | MS.gene062454:CDS | 50.0% | |
ATGTAGCCGACCCAATTGAG+TGG | - | chr7.3:75614334-75614353 | MS.gene062454:CDS | 50.0% | |
CATATGCAACAGCCTCGTCT+GGG | + | chr7.3:75615450-75615469 | None:intergenic | 50.0% | |
CCATCACCAACGACAAAGGA+AGG | - | chr7.3:75615860-75615879 | MS.gene062454:intron | 50.0% | |
CCCAGATCTATTCCAATCGC+AGG | + | chr7.3:75613671-75613690 | None:intergenic | 50.0% | |
CCTGGTGAAAAGCCCATGAT+TGG | - | chr7.3:75614638-75614657 | MS.gene062454:CDS | 50.0% | |
CGGTGATGCTGCTAAGAATC+AGG | - | chr7.3:75613808-75613827 | MS.gene062454:CDS | 50.0% | |
CTTACCCCACTCAATTGGGT+CGG | + | chr7.3:75614343-75614362 | None:intergenic | 50.0% | |
CTTGGTCTAGAAACTGCTGG+TGG | - | chr7.3:75615556-75615575 | MS.gene062454:intron | 50.0% | |
GTGATTTGAGGAACACCACG+GGG | + | chr7.3:75615760-75615779 | None:intergenic | 50.0% | |
GTGGTTGGACAGTAACCAGT+TGG | - | chr7.3:75616092-75616111 | MS.gene062454:CDS | 50.0% | |
TACGCAATAGCTGCTGCAGT+AGG | + | chr7.3:75614878-75614897 | None:intergenic | 50.0% | |
TCCATACCACCAGCCATATC+AGG | + | chr7.3:75616207-75616226 | None:intergenic | 50.0% | |
TCCTGATATGGCTGGTGGTA+TGG | - | chr7.3:75616203-75616222 | MS.gene062454:CDS | 50.0% | |
TGACGCTGCAATTCAGTGGT+TGG | - | chr7.3:75616077-75616096 | MS.gene062454:CDS | 50.0% | |
TGTAGCCGACCCAATTGAGT+GGG | - | chr7.3:75614335-75614354 | MS.gene062454:CDS | 50.0% | |
! | CCAATCATGGGCTTTTCACC+AGG | + | chr7.3:75614641-75614660 | None:intergenic | 50.0% |
! | CCTTCCTTTGTCGTTGGTGA+TGG | + | chr7.3:75615863-75615882 | None:intergenic | 50.0% |
! | CGCAGGACCTTCTCCTTTTA+CGG | + | chr7.3:75613654-75613673 | None:intergenic | 50.0% |
! | CTCAATCTCCGAAGTGCTCT+AGG | + | chr7.3:75615127-75615146 | None:intergenic | 50.0% |
! | GTGGTAACCCTAGAGCACTT+CGG | - | chr7.3:75615116-75615135 | MS.gene062454:CDS | 50.0% |
!! | AAGGATGCCGGTGTTATTGC+TGG | - | chr7.3:75614824-75614843 | MS.gene062454:CDS | 50.0% |
!! | CAAGAGTATCAACCCAGACG+AGG | - | chr7.3:75615435-75615454 | MS.gene062454:intron | 50.0% |
!! | GCAGCGATTTTGAGTGGTGA+AGG | - | chr7.3:75615484-75615503 | MS.gene062454:intron | 50.0% |
ACACCACAATCACCCGTGCT+AGG | - | chr7.3:75615236-75615255 | MS.gene062454:CDS | 55.0% | |
ACTCATCAGCCTCTGCCAAC+TGG | + | chr7.3:75616110-75616129 | None:intergenic | 55.0% | |
CAACGTAAGACGGCGTCGTT+CGG | + | chr7.3:75613763-75613782 | None:intergenic | 55.0% | |
CCAGACGAGGCTGTTGCATA+TGG | - | chr7.3:75615448-75615467 | MS.gene062454:intron | 55.0% | |
CCATATGCAACAGCCTCGTC+TGG | + | chr7.3:75615451-75615470 | None:intergenic | 55.0% | |
CGACCCAATTGAGTGGGGTA+AGG | - | chr7.3:75614341-75614360 | MS.gene062454:CDS | 55.0% | |
CGTCAAGCCACAAAGGATGC+CGG | - | chr7.3:75614812-75614831 | MS.gene062454:CDS | 55.0% | |
CTCTCAGCGTCAAGCCACAA+AGG | - | chr7.3:75614805-75614824 | MS.gene062454:CDS | 55.0% | |
GATGAAGTTCCTCCAGCAGC+AGG | - | chr7.3:75616228-75616247 | MS.gene062454:CDS | 55.0% | |
GCTGGTGATACCCATCTTGG+TGG | - | chr7.3:75615022-75615041 | MS.gene062454:CDS | 55.0% | |
GGACAGTAACCAGTTGGCAG+AGG | - | chr7.3:75616098-75616117 | MS.gene062454:CDS | 55.0% | |
GTAGCCGACCCAATTGAGTG+GGG | - | chr7.3:75614336-75614355 | MS.gene062454:CDS | 55.0% | |
!! | AGGTGGAGGTGCTCCTGATA+TGG | - | chr7.3:75616191-75616210 | MS.gene062454:CDS | 55.0% |
GAAGTTCCTCCAGCAGCAGG+TGG | - | chr7.3:75616231-75616250 | MS.gene062454:CDS | 60.0% | |
GGTGCTCCTGATATGGCTGG+TGG | - | chr7.3:75616198-75616217 | MS.gene062454:CDS | 60.0% | |
!! | GGAGGTGCTCCTGATATGGC+TGG | - | chr7.3:75616195-75616214 | MS.gene062454:CDS | 60.0% |
ACGGGGAGCTGGAGGAATGC+CGG | + | chr7.3:75615743-75615762 | None:intergenic | 65.0% | |
TGAGGAACACCACGGGGAGC+TGG | + | chr7.3:75615754-75615773 | None:intergenic | 65.0% | |
CCAGCACCACCTGCTGCTGG+AGG | + | chr7.3:75616240-75616259 | None:intergenic | 70.0% | |
CCTCCAGCAGCAGGTGGTGC+TGG | - | chr7.3:75616237-75616256 | MS.gene062454:CDS | 70.0% | |
GGAACACCACGGGGAGCTGG+AGG | + | chr7.3:75615751-75615770 | None:intergenic | 70.0% | |
GGACCAGCACCACCTGCTGC+TGG | + | chr7.3:75616243-75616262 | None:intergenic | 70.0% | |
GGCATTCCTCCAGCTCCCCG+TGG | - | chr7.3:75615742-75615761 | MS.gene062454:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 75613647 | 75616284 | 75613647 | ID=MS.gene062454 |
chr7.3 | mRNA | 75613647 | 75616284 | 75613647 | ID=MS.gene062454.t1;Parent=MS.gene062454 |
chr7.3 | exon | 75616071 | 75616284 | 75616071 | ID=MS.gene062454.t1.exon1;Parent=MS.gene062454.t1 |
chr7.3 | CDS | 75616071 | 75616284 | 75616071 | ID=cds.MS.gene062454.t1;Parent=MS.gene062454.t1 |
chr7.3 | exon | 75613647 | 75615379 | 75613647 | ID=MS.gene062454.t1.exon2;Parent=MS.gene062454.t1 |
chr7.3 | CDS | 75613647 | 75615379 | 75613647 | ID=cds.MS.gene062454.t1;Parent=MS.gene062454.t1 |
Gene Sequence |
Protein sequence |