AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene062456


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene062456.t1 MTR_7g024390 98.920 648 7 0 1 648 1 648 0.0 1321
MS.gene062456.t1 MTR_7g099680 93.991 649 38 1 1 648 1 649 0.0 1260
MS.gene062456.t1 MTR_7g024580 92.791 652 40 3 1 648 1 649 0.0 1242
MS.gene062456.t1 MTR_4g063710 92.154 650 48 2 1 648 1 649 0.0 1225
MS.gene062456.t1 MTR_4g063720 92.012 651 47 2 1 648 1 649 0.0 1222
MS.gene062456.t1 MTR_4g130540 86.391 654 82 2 1 648 1 653 0.0 1149
MS.gene062456.t1 MTR_6g033850 67.480 615 199 1 1 615 1 614 0.0 852
MS.gene062456.t1 MTR_6g033760 66.883 616 203 1 1 616 1 615 0.0 841
MS.gene062456.t1 MTR_7g025760 66.023 621 207 3 1 619 1 619 0.0 838
MS.gene062456.t1 MTR_7g026030 65.862 621 207 4 1 619 1 618 0.0 833
MS.gene062456.t1 MTR_2g017730 67.107 605 179 3 9 607 8 598 0.0 827
MS.gene062456.t1 MTR_7g021440 65.528 615 208 3 1 613 1 613 0.0 823
MS.gene062456.t1 MTR_2g038260 66.559 619 200 6 1 615 1 616 0.0 822
MS.gene062456.t1 MTR_5g066800 64.490 628 208 4 1 615 1 626 0.0 822
MS.gene062456.t1 MTR_2g032550 66.069 613 204 3 6 615 7 618 0.0 817
MS.gene062456.t1 MTR_8g032650 65.862 621 207 4 1 619 1 618 0.0 815
MS.gene062456.t1 MTR_7g025820 66.667 597 195 3 1 595 1 595 0.0 812
MS.gene062456.t1 MTR_7g025720 64.734 621 214 4 1 619 1 618 0.0 810
MS.gene062456.t1 MTR_7g451380 64.563 618 215 3 1 615 1 617 0.0 807
MS.gene062456.t1 MTR_7g026110 63.695 617 218 5 1 615 1 613 0.0 804
MS.gene062456.t1 MTR_7g025790 64.563 618 214 4 1 616 1 615 0.0 801
MS.gene062456.t1 MTR_8g099795 65.472 614 206 4 7 618 36 645 0.0 801
MS.gene062456.t1 MTR_8g099945 65.309 614 207 4 7 618 36 645 0.0 801
MS.gene062456.t1 MTR_7g024030 64.812 611 210 4 1 609 1 608 0.0 798
MS.gene062456.t1 MTR_7g025620 64.918 610 209 4 1 608 1 607 0.0 798
MS.gene062456.t1 MTR_7g025630 64.251 621 203 6 1 619 1 604 0.0 791
MS.gene062456.t1 MTR_7g026090 64.390 615 213 3 1 613 1 611 0.0 789
MS.gene062456.t1 MTR_7g078190 64.000 625 216 7 1 619 1 622 0.0 788
MS.gene062456.t1 MTR_6g033870 63.099 626 224 3 2 621 3 627 0.0 786
MS.gene062456.t1 MTR_7g029415 64.332 614 211 7 6 615 13 622 0.0 785
MS.gene062456.t1 MTR_4g079590 63.502 611 218 4 1 608 1 609 0.0 784
MS.gene062456.t1 MTR_2g022050 65.049 618 212 3 1 615 1 617 0.0 784
MS.gene062456.t1 MTR_7g025740 63.328 619 213 6 1 608 1 616 0.0 782
MS.gene062456.t1 MTR_6g033955 62.460 626 229 2 1 621 1 625 0.0 780
MS.gene062456.t1 MTR_7g025770 62.783 618 225 4 1 615 1 616 0.0 780
MS.gene062456.t1 MTR_8g103930 62.124 631 206 7 1 616 1 613 0.0 778
MS.gene062456.t1 MTR_7g011590 64.019 617 205 5 1 615 1 602 0.0 777
MS.gene062456.t1 MTR_2g437440 63.107 618 206 4 1 615 1 599 0.0 777
MS.gene062456.t1 MTR_7g078210 63.782 624 218 6 1 619 1 621 0.0 775
MS.gene062456.t1 MTR_7g026170 63.328 619 220 6 1 615 1 616 0.0 775
MS.gene062456.t1 MTR_6g033820 61.356 634 239 2 1 629 1 633 0.0 775
MS.gene062456.t1 MTR_2g038270 61.146 628 228 7 1 615 1 625 0.0 763
MS.gene062456.t1 MTR_7g074460 62.783 618 208 4 1 616 1 598 0.0 751
MS.gene062456.t1 MTR_7g026130 63.124 621 217 7 1 613 1 617 0.0 750
MS.gene062456.t1 MTR_2g032580 62.197 619 197 6 1 615 1 586 0.0 743
MS.gene062456.t1 MTR_4g027145 59.905 631 234 8 1 615 1 628 0.0 736
MS.gene062456.t1 MTR_7g026140 60.420 619 220 8 1 614 1 599 0.0 731
MS.gene062456.t1 MTR_7g025260 62.478 573 211 3 49 619 21 591 0.0 723
MS.gene062456.t1 MTR_1g017130 59.247 611 204 7 1 608 1 569 0.0 714
MS.gene062456.t1 MTR_7g451360 58.937 621 190 7 1 617 1 560 0.0 702
MS.gene062456.t1 MTR_6g033800 65.209 526 180 2 90 615 1 523 0.0 696
MS.gene062456.t1 MTR_2g040260 83.000 400 66 1 1 400 1030 1427 0.0 690
MS.gene062456.t1 MTR_2g040370 86.632 389 50 1 4 392 1024 1410 0.0 689
MS.gene062456.t1 MTR_2g040370 85.195 385 54 2 4 387 1408 1790 0.0 652
MS.gene062456.t1 MTR_2g040370 87.047 386 48 1 4 389 1024 1407 0.0 689
MS.gene062456.t1 MTR_2g040370 85.233 386 54 2 4 388 1408 1791 0.0 654
MS.gene062456.t1 MTR_2g040160 82.500 400 68 1 1 400 1101 1498 0.0 677
MS.gene062456.t1 MTR_7g007000 56.704 619 217 7 1 614 1 573 0.0 674
MS.gene062456.t1 MTR_7g035155 56.149 618 212 7 1 615 1 562 0.0 662
MS.gene062456.t1 MTR_4g063720 89.589 365 32 3 287 648 217 578 0.0 654
MS.gene062456.t1 MTR_4g063720 91.964 224 18 0 1 224 1 224 1.52e-144 432
MS.gene062456.t1 MTR_2g040220 73.128 454 104 4 1 436 1010 1463 0.0 651
MS.gene062456.t1 MTR_2g040220 56.872 211 34 4 446 648 1397 1558 1.95e-55 204
MS.gene062456.t1 MTR_1g041565 55.700 614 195 10 6 615 2 542 0.0 645
MS.gene062456.t1 MTR_2g040350 79.449 399 76 3 6 400 1035 1431 0.0 644
MS.gene062456.t1 MTR_2g040350 79.449 399 76 3 6 400 817 1213 0.0 644
MS.gene062456.t1 MTR_2g032160 73.333 375 98 1 1 373 1 375 0.0 582
MS.gene062456.t1 MTR_2g032160 42.424 99 56 1 519 616 365 463 2.54e-12 70.1
MS.gene062456.t1 MTR_2g010020 52.249 578 249 10 10 580 58 615 0.0 566
MS.gene062456.t1 MTR_2g010020 52.249 578 249 10 10 580 57 614 0.0 566
MS.gene062456.t1 MTR_4g092920 51.730 578 253 9 10 578 54 614 0.0 558
MS.gene062456.t1 MTR_2g005690 47.649 638 296 12 10 637 72 681 0.0 532
MS.gene062456.t1 MTR_6g034005 49.360 547 254 8 80 615 2 536 1.50e-166 493
MS.gene062456.t1 MTR_4g092920 51.710 497 215 8 90 578 1 480 1.34e-163 480
MS.gene062456.t1 MTR_1g077230 74.823 282 69 1 1 280 1 282 1.59e-152 442
MS.gene062456.t1 MTR_4g088515 55.814 430 102 7 9 436 276 619 6.12e-146 437
MS.gene062456.t1 MTR_6g033810 59.337 332 85 3 86 415 8 291 3.70e-126 375
MS.gene062456.t1 MTR_7g026050 51.872 374 151 3 243 615 1 346 1.41e-125 375
MS.gene062456.t1 MTR_7g026080 71.138 246 69 1 1 244 1 246 1.59e-122 364
MS.gene062456.t1 MTR_6g033855 52.493 381 93 5 86 464 8 302 4.56e-120 360
MS.gene062456.t1 MTR_2g040355 47.289 461 82 10 187 646 2 302 1.19e-109 333
MS.gene062456.t1 MTR_2g031670 69.778 225 66 1 21 243 43 267 2.17e-108 331
MS.gene062456.t1 MTR_2g031670 74.627 67 16 1 342 408 275 340 2.54e-21 96.3
MS.gene062456.t1 MTR_5g006180 35.388 503 284 11 9 494 29 507 1.26e-88 287
MS.gene062456.t1 MTR_1g077240 54.209 297 126 4 320 615 1 288 1.83e-87 275
MS.gene062456.t1 MTR_2g102180 34.932 438 269 4 10 434 4 438 3.21e-84 283
MS.gene062456.t1 MTR_4g012050 34.932 438 269 4 10 434 4 438 4.74e-83 279
MS.gene062456.t1 MTR_1207s0010 71.591 176 49 1 106 281 1 175 1.08e-81 256
MS.gene062456.t1 MTR_5g097190 54.545 253 66 4 4 254 153 358 1.30e-79 257
MS.gene062456.t1 MTR_6g478100 60.849 212 69 2 36 247 10 207 9.12e-79 253
MS.gene062456.t1 MTR_6g478100 40.000 95 56 1 515 608 208 302 4.13e-12 68.2
MS.gene062456.t1 MTR_5g092570 34.660 427 270 4 10 430 4 427 1.94e-76 260
MS.gene062456.t1 MTR_3g051300 33.333 420 275 4 10 428 4 419 1.19e-75 258
MS.gene062456.t1 MTR_5g090110 33.874 493 273 13 9 482 28 486 6.69e-74 247
MS.gene062456.t1 MTR_4g115780 34.774 509 306 10 9 496 140 643 7.97e-70 240
MS.gene062456.t1 MTR_5g005870 41.718 326 178 5 265 587 35 351 1.41e-68 229
MS.gene062456.t1 MTR_4g107920 32.143 504 307 14 10 496 21 506 1.43e-67 231
MS.gene062456.t1 MTR_3g081170 27.947 526 334 13 10 498 27 544 1.04e-57 209
MS.gene062456.t1 MTR_6g033910 47.186 231 59 4 72 300 19 188 2.26e-55 187
MS.gene062456.t1 MTR_1g116250 44.000 275 111 5 342 615 56 288 3.78e-54 187
MS.gene062456.t1 MTR_7g074540 48.756 201 102 1 416 616 1 200 3.84e-54 184
MS.gene062456.t1 MTR_7g026180 75.630 119 29 0 74 192 21 139 2.86e-53 186
MS.gene062456.t1 MTR_7g026180 35.023 217 108 4 401 615 144 329 1.29e-27 114
MS.gene062456.t1 MTR_2g017710 43.077 260 63 6 223 480 17 193 5.86e-48 170
MS.gene062456.t1 MTR_7g451390 48.634 183 92 2 436 617 10 191 1.49e-47 166
MS.gene062456.t1 MTR_5g005890 38.326 227 89 4 72 297 5 181 1.33e-42 152
MS.gene062456.t1 MTR_1g068900 51.316 152 66 4 426 573 23 170 3.67e-38 139
MS.gene062456.t1 MTR_6g033805 76.056 71 17 0 1 71 1 71 8.64e-32 118
MS.gene062456.t1 MTR_4g027235 73.333 75 18 1 1 73 1 75 4.36e-30 113
MS.gene062456.t1 MTR_4g027085 73.333 75 18 1 1 73 1 75 4.36e-30 113
MS.gene062456.t1 MTR_7g026190 57.447 94 31 2 286 379 9 93 7.17e-28 112
MS.gene062456.t1 MTR_7g026190 39.496 119 69 2 498 616 94 209 1.67e-15 76.3
MS.gene062456.t1 MTR_2g040375 76.667 60 14 0 398 457 51 110 6.09e-23 94.7
MS.gene062456.t1 MTR_4g115860 46.739 92 49 0 396 487 29 120 2.32e-22 93.2
MS.gene062456.t1 MTR_6g033815 54.930 71 32 0 524 594 1 71 4.29e-20 86.3
MS.gene062456.t1 MTR_7g021430 52.000 75 36 0 213 287 1 75 1.95e-18 84.3
MS.gene062456.t1 MTR_7g026095 45.652 92 50 0 482 573 256 347 5.47e-18 86.3
MS.gene062456.t1 MTR_7g026095 50.000 88 28 2 86 173 189 260 8.38e-17 82.8
MS.gene062456.t1 MTR_7g026160 37.500 120 49 4 296 389 72 191 2.67e-12 67.8
MS.gene062456.t1 MTR_4g115785 44.615 65 36 0 440 504 7 71 9.72e-11 58.9
MS.gene062456.t1 MTR_6g033995 53.226 62 21 2 1 60 1 56 9.83e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene062456.t1 AT5G02500 91.551 651 52 1 1 648 1 651 0.0 1230
MS.gene062456.t1 AT3G12580 93.241 651 40 3 1 648 1 650 0.0 1229
MS.gene062456.t1 AT3G09440 91.834 649 52 1 1 648 1 649 0.0 1226
MS.gene062456.t1 AT3G09440 91.834 649 52 1 1 648 1 649 0.0 1226
MS.gene062456.t1 AT3G09440 91.834 649 52 1 1 648 1 649 0.0 1226
MS.gene062456.t1 AT3G09440 91.834 649 52 1 1 648 1 649 0.0 1226
MS.gene062456.t1 AT5G02490 89.893 653 61 2 1 648 1 653 0.0 1203
MS.gene062456.t1 AT1G56410 87.884 619 73 1 1 619 1 617 0.0 1126
MS.gene062456.t1 AT1G16030 83.231 650 103 3 1 648 1 646 0.0 1118
MS.gene062456.t1 AT5G42020 65.064 624 211 5 7 627 35 654 0.0 830
MS.gene062456.t1 AT5G42020 65.064 624 211 5 7 627 40 659 0.0 829
MS.gene062456.t1 AT5G28540 65.635 614 205 4 7 618 35 644 0.0 827
MS.gene062456.t1 AT1G09080 62.969 613 222 3 7 618 40 648 0.0 786
MS.gene062456.t1 AT1G09080 62.969 613 222 3 7 618 50 658 0.0 785
MS.gene062456.t1 AT5G02500 93.655 394 25 0 1 394 1 394 0.0 777
MS.gene062456.t1 AT5G02500 77.206 136 28 1 516 648 386 521 5.52e-57 201
MS.gene062456.t1 AT5G42020 58.974 624 194 10 7 627 35 599 0.0 700
MS.gene062456.t1 AT5G09590 52.931 580 243 10 10 580 60 618 0.0 560
MS.gene062456.t1 AT4G24280 49.186 614 286 11 10 617 81 674 0.0 539
MS.gene062456.t1 AT5G49910 48.644 627 295 11 10 628 81 688 0.0 538
MS.gene062456.t1 AT4G37910 51.730 578 253 9 10 578 55 615 0.0 531
MS.gene062456.t1 AT4G37910 51.730 578 253 9 10 578 55 615 0.0 531
MS.gene062456.t1 AT1G79930 29.468 733 416 14 10 648 4 729 4.96e-91 300
MS.gene062456.t1 AT2G32120 34.961 512 305 9 9 508 30 525 2.21e-90 291
MS.gene062456.t1 AT2G32120 34.961 512 305 9 9 508 30 525 2.21e-90 291
MS.gene062456.t1 AT1G79930 29.059 733 419 15 10 648 4 729 1.17e-88 293
MS.gene062456.t1 AT1G79920 35.845 438 265 4 10 434 4 438 1.25e-86 286
MS.gene062456.t1 AT1G79920 35.845 438 265 4 10 434 4 438 1.80e-86 286
MS.gene062456.t1 AT1G79920 35.845 438 265 4 10 434 4 438 1.80e-86 286
MS.gene062456.t1 AT1G79920 35.845 438 265 4 10 434 4 438 1.80e-86 286
MS.gene062456.t1 AT1G11660 27.111 675 405 11 10 619 4 656 3.46e-83 278
MS.gene062456.t1 AT1G11660 27.111 675 405 11 10 619 4 656 3.46e-83 278
MS.gene062456.t1 AT1G11660 27.111 675 405 11 10 619 4 656 3.46e-83 278
MS.gene062456.t1 AT1G11660 27.187 640 379 11 45 619 2 619 5.02e-75 255
MS.gene062456.t1 AT4G16660 25.734 715 419 18 5 612 46 755 3.67e-61 219
MS.gene062456.t1 AT4G16660 25.734 715 419 18 5 612 22 731 1.36e-60 218

Find 157 sgRNAs with CRISPR-Local

Find 194 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGGTAAATTCGAGCTTTC+CGG 0.198417 7.3:-75624423 MS.gene062456:CDS
GGTTCAAGATTTGTTGCTTT+TGG 0.209433 7.3:-75624628 MS.gene062456:CDS
TAATCGACTTCTTCAATCTT+AGG 0.232445 7.3:+75623883 None:intergenic
TCTTAAACTCTTGAACAAAA+TGG 0.275265 7.3:+75625072 None:intergenic
AGAGAAAACTTGCTCCTTCT+TGG 0.282443 7.3:+75624524 None:intergenic
CTCTTTCACCTTCATAAACT+TGG 0.296140 7.3:+75624469 None:intergenic
CAAAGTTCAGCAACTGTTGC+AGG 0.296484 7.3:-75624757 MS.gene062456:CDS
GTTCATGATGTTGTTCTTGT+TGG 0.297305 7.3:-75624798 MS.gene062456:CDS
TTACCGAAAACGGTGTTAAC+AGG 0.308664 7.3:+75626280 None:intergenic
CCAGATGAGGCTGTTGCTTA+TGG 0.314371 7.3:-75624696 MS.gene062456:CDS
TGCTGAAGAAATTTCATCTA+TGG 0.318039 7.3:-75625450 MS.gene062456:CDS
GGACCAGCAGTAACCTTAAA+AGG 0.319176 7.3:+75625527 None:intergenic
TGATACATCTTAGCAATGAT+TGG 0.323430 7.3:+75623976 None:intergenic
TGCAACAGTTGCTGAACTTT+GGG 0.329904 7.3:+75624759 None:intergenic
CTGCAACAGTTGCTGAACTT+TGG 0.331445 7.3:+75624758 None:intergenic
CATACTCGTGTGTTGGAGTA+TGG 0.336614 7.3:-75626426 MS.gene062456:CDS
CCATAAGCAACAGCCTCATC+TGG 0.337884 7.3:+75624696 None:intergenic
CCCAGATCTATTCCGATTGC+AGG 0.350491 7.3:+75626454 None:intergenic
CATCCTTTGTGGCTTGACGC+TGG 0.360560 7.3:+75625336 None:intergenic
AAGGATGCCGGTGTTATTGC+TGG 0.363539 7.3:-75625320 MS.gene062456:CDS
GTTGGAATTGTTGTGTTCCT+TGG 0.367995 7.3:+75624546 None:intergenic
CTGTTGCAGGATTTCTTCAA+TGG 0.372622 7.3:-75624744 MS.gene062456:CDS
TCCTGCAATCGGAATAGATC+TGG 0.379604 7.3:-75626455 MS.gene062456:CDS
ACAGATGCTAAACGTTTGAT+TGG 0.381796 7.3:-75625596 MS.gene062456:intron
ATCCTTTGTGGCTTGACGCT+GGG 0.389762 7.3:+75625337 None:intergenic
GGTACGGTTTCCTTGATCAT+TGG 0.389831 7.3:+75626378 None:intergenic
CCTCCAGCAGCAGGTGGTGC+TGG 0.395029 7.3:-75623907 MS.gene062456:CDS
GATGTGACTCCATTGTCTCT+TGG 0.395356 7.3:-75624606 MS.gene062456:CDS
TGCGTATGGTCTTGACAAAA+AGG 0.402154 7.3:-75625252 MS.gene062456:CDS
TCCATACCACCAGCCATATC+AGG 0.402194 7.3:+75623940 None:intergenic
TGAGATTGATTCTTTGTTTG+AGG 0.412145 7.3:-75624943 MS.gene062456:CDS
AGGTGGAGGTGCTCCTGATA+TGG 0.414427 7.3:-75623953 MS.gene062456:CDS
CGACAAAGGAAGGTTGTCTA+AGG 0.418046 7.3:-75624274 MS.gene062456:CDS
TCTGCTGAGGACAAAACAAC+TGG 0.419349 7.3:-75624324 MS.gene062456:CDS
TCCTGATATGGCTGGTGGTA+TGG 0.425793 7.3:-75623941 MS.gene062456:CDS
CGGTGATGCTGCTAAGAATC+AGG 0.426722 7.3:-75626314 MS.gene062456:CDS
TACCCAACAAGTTGTTATCT+CGG 0.430539 7.3:+75624439 None:intergenic
ACAATTAAAGACGAGAAGAT+TGG 0.430790 7.3:-75624135 MS.gene062456:CDS
CTTGTAGTTAACACCAATCA+TGG 0.433031 7.3:+75625493 None:intergenic
CATGATGTTGTTCTTGTTGG+TGG 0.435475 7.3:-75624795 MS.gene062456:CDS
GAGATTGCCGAAGCTTATCT+TGG 0.435979 7.3:-75625410 MS.gene062456:CDS
TCTCTCAAACACTTCTCAAC+AGG 0.442304 7.3:+75624843 None:intergenic
TTTAAGGTTACTGCTGGTCC+TGG 0.442913 7.3:-75625524 MS.gene062456:CDS
GATACATCTTAGCAATGATT+GGG 0.442977 7.3:+75623977 None:intergenic
GGTAGATGCAAAGAATGCTT+TGG 0.445600 7.3:-75624184 MS.gene062456:CDS
ACCCAACAAGTTGTTATCTC+GGG 0.447081 7.3:+75624440 None:intergenic
AATAACACCGGCATCCTTTG+TGG 0.457869 7.3:+75625325 None:intergenic
AAAACTTGCTCCTTCTTGGT+TGG 0.457926 7.3:+75624528 None:intergenic
CTCAATCTCCGAAGTGCTCT+AGG 0.460918 7.3:+75625020 None:intergenic
CCATCAACAATGGCCGGAAA+AGG 0.462382 7.3:-75626484 None:intergenic
TAAGGAAGAAATTGAGAAGA+TGG 0.466344 7.3:-75624256 MS.gene062456:CDS
ACTCATCAGCCTCTGCCAAC+TGG 0.471841 7.3:+75624037 None:intergenic
GGACCAGCACCACCTGCTGC+TGG 0.476038 7.3:+75623904 None:intergenic
CAAAATCTTCGCCACCAAGA+TGG 0.476601 7.3:+75625111 None:intergenic
GGATCTGTTTAGAAAGTGTA+TGG 0.478651 7.3:-75624868 MS.gene062456:CDS
ACTGCTGGTGATACCCATCT+TGG 0.479477 7.3:-75625125 MS.gene062456:CDS
GAGATTGATTCTTTGTTTGA+GGG 0.481259 7.3:-75624942 MS.gene062456:CDS
AACCCGAGATAACAACTTGT+TGG 0.482428 7.3:-75624442 MS.gene062456:CDS
ACCCGAGATAACAACTTGTT+GGG 0.483163 7.3:-75624441 MS.gene062456:CDS
AGCTGAACCAAGATAAGCTT+CGG 0.483247 7.3:+75625403 None:intergenic
AAGAACAAGAAGGATATTAG+TGG 0.486274 7.3:-75625047 MS.gene062456:CDS
TTGCTGGTTTGAATGTTATG+AGG 0.486524 7.3:-75625304 MS.gene062456:CDS
CCTTCCTTTGTCGTTGGTGA+TGG 0.494022 7.3:+75624284 None:intergenic
AAAATCTTCGCCACCAAGAT+GGG 0.495980 7.3:+75625112 None:intergenic
TTTGAAGTTAAGGCCACTGC+TGG 0.497920 7.3:-75625140 MS.gene062456:CDS
GAGATCATCGCCAATGATCA+AGG 0.498452 7.3:-75626388 MS.gene062456:CDS
GGAGGTGCTCCTGATATGGC+TGG 0.498862 7.3:-75623949 MS.gene062456:CDS
TCAAAGCAAACTGTGATTTG+AGG 0.500560 7.3:+75624375 None:intergenic
ACGGGGAGCTGGAGGAATGC+CGG 0.501984 7.3:+75624404 None:intergenic
TGAGGAACACCACGGGGAGC+TGG 0.503287 7.3:+75624393 None:intergenic
AGAAATTGAGAAGATGGTTG+AGG 0.504892 7.3:-75624250 MS.gene062456:CDS
AATCACCCGTGCTAGGTTTG+AGG 0.506158 7.3:-75624901 MS.gene062456:CDS
AAAGGAGAAGGTCCTGCAAT+CGG 0.506751 7.3:-75626466 MS.gene062456:CDS
ATCATTGCTAAGATGTATCA+AGG 0.508198 7.3:-75623973 MS.gene062456:CDS
ATGCTAAACGTTTGATTGGA+AGG 0.508528 7.3:-75625592 MS.gene062456:CDS
AATCGAAATCTTACCGAAAA+CGG 0.511172 7.3:+75626270 None:intergenic
ACTGGTTACTGTCCAACCAC+TGG 0.512422 7.3:+75624055 None:intergenic
GATGAAGTTCCTCCAGCAGC+AGG 0.518012 7.3:-75623916 MS.gene062456:CDS
GTGTTTGAGAGATGCTAAGA+TGG 0.518945 7.3:-75624832 MS.gene062456:CDS
GAGTGGTGAAGGAAACGAAA+AGG 0.521854 7.3:-75624649 MS.gene062456:CDS
AAACAAAGAATCAATCTCAA+TGG 0.529138 7.3:+75624947 None:intergenic
CATGATTGGTGTTAACTACA+AGG 0.531338 7.3:-75625492 MS.gene062456:CDS
GTCTTGATCCAAGTTTATGA+AGG 0.535124 7.3:-75624477 MS.gene062456:CDS
TTGAATCCATCAACAATGGC+CGG 0.536348 7.3:-75626490 None:intergenic
TGAGTTTGAAGATAAGATGA+AGG 0.542099 7.3:-75624019 MS.gene062456:CDS
CACCACTCAATATAGCTGCT+TGG 0.544220 7.3:+75624664 None:intergenic
CGTCAAGCCACAAAGGATGC+CGG 0.544853 7.3:-75625332 MS.gene062456:CDS
ACACCACAATCACCCGTGCT+AGG 0.544924 7.3:-75624908 MS.gene062456:CDS
AGACAACCTTCCTTTGTCGT+TGG 0.545078 7.3:+75624278 None:intergenic
CCTGGTGAAAAGCCCATGAT+TGG 0.545365 7.3:-75625506 MS.gene062456:CDS
ACTGATAGTGAACGATTGAT+CGG 0.545823 7.3:-75626334 MS.gene062456:CDS
GCAGGATTTCTTCAATGGCA+AGG 0.546221 7.3:-75624739 MS.gene062456:CDS
TCTCTTGGTCTAGAAACTGC+TGG 0.546967 7.3:-75624591 MS.gene062456:CDS
GAAATACAAGGCAGAAGATG+AGG 0.548776 7.3:-75624220 MS.gene062456:CDS
TGCTTTGACATTGATGCCAA+CGG 0.551213 7.3:-75624360 MS.gene062456:CDS
TGACGCCGCAATCCAGTGGT+TGG 0.555140 7.3:-75624067 MS.gene062456:CDS
AAACCTAGCACGGGTGATTG+TGG 0.557012 7.3:+75624905 None:intergenic
TGGGAGTCGTTGAAGTAAGC+TGG 0.557282 7.3:+75625356 None:intergenic
TAGCAATGATTGGGTTGCAA+AGG 0.559904 7.3:+75623986 None:intergenic
GCTGGTGATACCCATCTTGG+TGG 0.562989 7.3:-75625122 MS.gene062456:CDS
GTCTCTTCTTACTATTGAAG+AGG 0.563002 7.3:-75625168 MS.gene062456:CDS
TCAGTAAAAGCAACGTAAGA+CGG 0.567446 7.3:+75626352 None:intergenic
GTTTAAGAGGAAGAACAAGA+AGG 0.567567 7.3:-75625057 MS.gene062456:CDS
ACTGCAGCAGCTATTGCGTA+TGG 0.568324 7.3:-75625266 MS.gene062456:CDS
GTTTCTAGACCAAGAGACAA+TGG 0.570014 7.3:+75624597 None:intergenic
TCATGACAGTTCTCATTCCA+AGG 0.575999 7.3:-75624563 MS.gene062456:CDS
CATAAGCAACAGCCTCATCT+GGG 0.576751 7.3:+75624697 None:intergenic
CACAACAATTCCAACCAAGA+AGG 0.576868 7.3:-75624538 MS.gene062456:CDS
CAACGTAAGACGGCGTGGTA+CGG 0.577487 7.3:+75626362 None:intergenic
GCAGCTATATTGAGTGGTGA+AGG 0.578070 7.3:-75624660 MS.gene062456:CDS
TCAATCTCCGAAGTGCTCTA+GGG 0.579128 7.3:+75625021 None:intergenic
GGACAGTAACCAGTTGGCAG+AGG 0.580101 7.3:-75624046 MS.gene062456:CDS
CCTGCAATCGGAATAGATCT+GGG 0.580300 7.3:-75626454 MS.gene062456:CDS
ATAAACTTGGATCAAGACAC+CGG 0.583394 7.3:+75624482 None:intergenic
TAAGTTCCTCAAACCTAGCA+CGG 0.587266 7.3:+75624895 None:intergenic
TCTCTTCTTACTATTGAAGA+GGG 0.590747 7.3:-75625167 MS.gene062456:CDS
GGAACAACATACTCGTGTGT+TGG 0.592871 7.3:-75626433 MS.gene062456:CDS
CCAGCACCACCTGCTGCTGG+AGG 0.596593 7.3:+75623907 None:intergenic
ACAATGGCCGGAAAAGGAGA+AGG 0.599156 7.3:-75626478 MS.gene062456:CDS
CCATCACCAACGACAAAGGA+AGG 0.602128 7.3:-75624284 MS.gene062456:CDS
GCTAAGATGTATCAAGGTGG+AGG 0.602520 7.3:-75623967 MS.gene062456:CDS
AAAACTATGCTTACAACATG+AGG 0.603991 7.3:-75624161 MS.gene062456:CDS
AAGTTCCTCAAACCTAGCAC+GGG 0.609404 7.3:+75624896 None:intergenic
TTGTAGTTAACACCAATCAT+GGG 0.609538 7.3:+75625494 None:intergenic
TGTGATTTGAGGAACACCAC+GGG 0.611264 7.3:+75624386 None:intergenic
ACATACTCAGACAACCAACC+CGG 0.611760 7.3:-75624501 MS.gene062456:CDS
TACCGAAAACGGTGTTAACA+GGG 0.612530 7.3:+75626281 None:intergenic
ATTACCATCACCAACGACAA+AGG 0.613058 7.3:-75624288 MS.gene062456:CDS
CTCCCAGCGTCAAGCCACAA+AGG 0.614910 7.3:-75625339 MS.gene062456:CDS
TTCAGAGTGACATGAAGTTG+TGG 0.623777 7.3:-75625550 MS.gene062456:CDS
CAATTGACGCCGCAATCCAG+TGG 0.626912 7.3:-75624071 MS.gene062456:CDS
TAGGTTTGAGGAACTTAACA+TGG 0.627754 7.3:-75624889 MS.gene062456:CDS
CAAGAGTATCAACCCAGATG+AGG 0.630768 7.3:-75624709 MS.gene062456:CDS
GGAACACCACGGGGAGCTGG+AGG 0.631612 7.3:+75624396 None:intergenic
GTGGTTGGACAGTAACCAGT+TGG 0.633145 7.3:-75624052 MS.gene062456:CDS
TGGTGTTAACTACAAGGGTG+AGG 0.634934 7.3:-75625486 MS.gene062456:CDS
AGAGACATTCAAGATACCGT+TGG 0.636371 7.3:+75624344 None:intergenic
CTGCTGAGGACAAAACAACT+GGG 0.640141 7.3:-75624323 MS.gene062456:CDS
TGAGGAAGCAGAGAAATACA+AGG 0.640542 7.3:-75624232 MS.gene062456:CDS
GTGGTAACCCTAGAGCACTT+CGG 0.640725 7.3:-75625028 MS.gene062456:CDS
GGTGCTCCTGATATGGCTGG+TGG 0.645251 7.3:-75623946 MS.gene062456:CDS
CTTGGATCAAGACACCGGGT+TGG 0.647537 7.3:+75624487 None:intergenic
GAAGTTCCTCCAGCAGCAGG+TGG 0.652201 7.3:-75623913 MS.gene062456:CDS
TATCTTGAATGTCTCTGCTG+AGG 0.656403 7.3:-75624337 MS.gene062456:CDS
AAGATGGGTATCACCAGCAG+TGG 0.661313 7.3:+75625127 None:intergenic
ATGATTGGTGTTAACTACAA+GGG 0.664773 7.3:-75625491 MS.gene062456:CDS
ACTGTCCAACCACTGGATTG+CGG 0.668548 7.3:+75624062 None:intergenic
CTGTGATTTGAGGAACACCA+CGG 0.668774 7.3:+75624385 None:intergenic
TAAACTTGGATCAAGACACC+GGG 0.670800 7.3:+75624483 None:intergenic
CTTGGTCTAGAAACTGCTGG+TGG 0.672600 7.3:-75624588 MS.gene062456:CDS
TACGCAATAGCTGCTGCAGT+AGG 0.675334 7.3:+75625269 None:intergenic
AAAAGCAACGTAAGACGGCG+TGG 0.680008 7.3:+75626357 None:intergenic
ATTCAAACCAGCAATAACAC+CGG 0.680140 7.3:+75625313 None:intergenic
GGCATTCCTCCAGCTCCCCG+TGG 0.680342 7.3:-75624402 MS.gene062456:CDS
GTCCAAGCAGCTATATTGAG+TGG 0.720745 7.3:-75624666 MS.gene062456:CDS
ATTGCTAAGATGTATCAAGG+TGG 0.733799 7.3:-75623970 MS.gene062456:CDS
GTGATTTGAGGAACACCACG+GGG 0.760451 7.3:+75624387 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAATAAATAATTAATCTA+GGG - chr7.3:75624227-75624246 MS.gene062456:CDS 10.0%
!! TGAAAATAAATAATTAATCT+AGG - chr7.3:75624226-75624245 MS.gene062456:CDS 10.0%
!! TTTATAATGATAGAACATTA+TGG - chr7.3:75624515-75624534 MS.gene062456:CDS 15.0%
!! GATACTATTTAATTAAGACA+CGG + chr7.3:75624610-75624629 None:intergenic 20.0%
!!! AATGTGTTGATTTTTGATTT+GGG - chr7.3:75625148-75625167 MS.gene062456:CDS 20.0%
!!! ATTTGTTTGATTTTTTGAGT+TGG - chr7.3:75624480-75624499 MS.gene062456:CDS 20.0%
!!! TTTATTCTTGTTGATTAATG+AGG - chr7.3:75624398-75624417 MS.gene062456:CDS 20.0%
! AAACAAAGAATCAATCTCAA+TGG + chr7.3:75625413-75625432 None:intergenic 25.0%
! ATTATATCCCTTACATTGAA+CGG - chr7.3:75624430-75624449 MS.gene062456:CDS 25.0%
! TCTTAAACTCTTGAACAAAA+TGG + chr7.3:75625288-75625307 None:intergenic 25.0%
!! ATTTTGTTCAAGAGTTTAAG+AGG - chr7.3:75625287-75625306 MS.gene062456:CDS 25.0%
!!! AATTAATCTAGGGTTTTATC+TGG - chr7.3:75624237-75624256 MS.gene062456:CDS 25.0%
!!! GAATGTGTTGATTTTTGATT+TGG - chr7.3:75625147-75625166 MS.gene062456:CDS 25.0%
!!! TTTGATTTTTTGAGTTGGAT+TGG - chr7.3:75624485-75624504 MS.gene062456:CDS 25.0%
AAAACTATGCTTACAACATG+AGG - chr7.3:75626196-75626215 MS.gene062456:intron 30.0%
AAATTCACCGTTCAATGTAA+GGG + chr7.3:75624440-75624459 None:intergenic 30.0%
AAGAACAAGAAGGATATTAG+TGG - chr7.3:75625310-75625329 MS.gene062456:CDS 30.0%
AATCGAAATCTTACCGAAAA+CGG + chr7.3:75624090-75624109 None:intergenic 30.0%
ACAATTAAAGACGAGAAGAT+TGG - chr7.3:75626222-75626241 MS.gene062456:intron 30.0%
ATCATTGCTAAGATGTATCA+AGG - chr7.3:75626384-75626403 MS.gene062456:CDS 30.0%
GATACATCTTAGCAATGATT+GGG + chr7.3:75626383-75626402 None:intergenic 30.0%
TAAGGAAGAAATTGAGAAGA+TGG - chr7.3:75626101-75626120 MS.gene062456:intron 30.0%
TCTCTTCTTACTATTGAAGA+GGG - chr7.3:75625190-75625209 MS.gene062456:CDS 30.0%
TGAGTTTGAAGATAAGATGA+AGG - chr7.3:75626338-75626357 MS.gene062456:CDS 30.0%
TGATACATCTTAGCAATGAT+TGG + chr7.3:75626384-75626403 None:intergenic 30.0%
TGCTGAAGAAATTTCATCTA+TGG - chr7.3:75624907-75624926 MS.gene062456:CDS 30.0%
TTGTAGTTAACACCAATCAT+GGG + chr7.3:75624866-75624885 None:intergenic 30.0%
! AATCTTCTTTTTGTCATCAG+GGG + chr7.3:75626259-75626278 None:intergenic 30.0%
! CAATCTTCTTTTTGTCATCA+GGG + chr7.3:75626260-75626279 None:intergenic 30.0%
! GAGATTGATTCTTTGTTTGA+GGG - chr7.3:75625415-75625434 MS.gene062456:CDS 30.0%
! TAATCGACTTCTTCAATCTT+AGG + chr7.3:75626477-75626496 None:intergenic 30.0%
! TCAATCTTCTTTTTGTCATC+AGG + chr7.3:75626261-75626280 None:intergenic 30.0%
! TGAGATTGATTCTTTGTTTG+AGG - chr7.3:75625414-75625433 MS.gene062456:CDS 30.0%
! TTAGAAGTTTGTTTGCTCAT+TGG - chr7.3:75624716-75624735 MS.gene062456:CDS 30.0%
! TTGTTTGCTCATTGGTTATT+TGG - chr7.3:75624724-75624743 MS.gene062456:CDS 30.0%
!! ATGATTGGTGTTAACTACAA+GGG - chr7.3:75624866-75624885 MS.gene062456:CDS 30.0%
!! CGAAGATTTTGATAACAGAA+TGG - chr7.3:75625258-75625277 MS.gene062456:CDS 30.0%
!!! AGAGGGTATTTTTGAAGTTA+AGG - chr7.3:75625207-75625226 MS.gene062456:CDS 30.0%
!!! TTTTGAGTTGGATTGGAATA+TGG - chr7.3:75624492-75624511 MS.gene062456:CDS 30.0%
ACAGATGCTAAACGTTTGAT+TGG - chr7.3:75624761-75624780 MS.gene062456:CDS 35.0%
AGAAATTGAGAAGATGGTTG+AGG - chr7.3:75626107-75626126 MS.gene062456:intron 35.0%
AGATGAGGAACACAAAAAGA+AGG - chr7.3:75626152-75626171 MS.gene062456:intron 35.0%
ATAAACTTGGATCAAGACAC+CGG + chr7.3:75625878-75625897 None:intergenic 35.0%
ATGCTAAACGTTTGATTGGA+AGG - chr7.3:75624765-75624784 MS.gene062456:CDS 35.0%
ATTCAAACCAGCAATAACAC+CGG + chr7.3:75625047-75625066 None:intergenic 35.0%
ATTGCTAAGATGTATCAAGG+TGG - chr7.3:75626387-75626406 MS.gene062456:CDS 35.0%
CAAATTCACCGTTCAATGTA+AGG + chr7.3:75624441-75624460 None:intergenic 35.0%
CTCTTTCACCTTCATAAACT+TGG + chr7.3:75625891-75625910 None:intergenic 35.0%
CTTGTAGTTAACACCAATCA+TGG + chr7.3:75624867-75624886 None:intergenic 35.0%
GTCTCTTCTTACTATTGAAG+AGG - chr7.3:75625189-75625208 MS.gene062456:CDS 35.0%
GTCTTGATCCAAGTTTATGA+AGG - chr7.3:75625880-75625899 MS.gene062456:intron 35.0%
GTTCATGATGTTGTTCTTGT+TGG - chr7.3:75625559-75625578 MS.gene062456:CDS 35.0%
GTTTAAGAGGAAGAACAAGA+AGG - chr7.3:75625300-75625319 MS.gene062456:CDS 35.0%
TACCCAACAAGTTGTTATCT+CGG + chr7.3:75625921-75625940 None:intergenic 35.0%
TAGGTTTGAGGAACTTAACA+TGG - chr7.3:75625468-75625487 MS.gene062456:CDS 35.0%
TCAAAGCAAACTGTGATTTG+AGG + chr7.3:75625985-75626004 None:intergenic 35.0%
TCAGTAAAAGCAACGTAAGA+CGG + chr7.3:75624008-75624027 None:intergenic 35.0%
! ACTGATAGTGAACGATTGAT+CGG - chr7.3:75624023-75624042 MS.gene062456:CDS 35.0%
! GGATCTGTTTAGAAAGTGTA+TGG - chr7.3:75625489-75625508 MS.gene062456:CDS 35.0%
!! CATGATTGGTGTTAACTACA+AGG - chr7.3:75624865-75624884 MS.gene062456:CDS 35.0%
!! TTGCTGGTTTGAATGTTATG+AGG - chr7.3:75625053-75625072 MS.gene062456:CDS 35.0%
!!! GGTTCAAGATTTGTTGCTTT+TGG - chr7.3:75625729-75625748 MS.gene062456:intron 35.0%
!!! GTGTTGATTTTTGATTTGGG+AGG - chr7.3:75625151-75625170 MS.gene062456:CDS 35.0%
!!! TTGATTTTTGATTTGGGAGG+TGG - chr7.3:75625154-75625173 MS.gene062456:CDS 35.0%
AAAATCTTCGCCACCAAGAT+GGG + chr7.3:75625248-75625267 None:intergenic 40.0%
AAACCTTACCCCACTCAATT+GGG + chr7.3:75624563-75624582 None:intergenic 40.0%
AACCCGAGATAACAACTTGT+TGG - chr7.3:75625915-75625934 MS.gene062456:intron 40.0%
ACCCAACAAGTTGTTATCTC+GGG + chr7.3:75625920-75625939 None:intergenic 40.0%
AGAGACATTCAAGATACCGT+TGG + chr7.3:75626016-75626035 None:intergenic 40.0%
AGCTGAACCAAGATAAGCTT+CGG + chr7.3:75624957-75624976 None:intergenic 40.0%
ATTACCATCACCAACGACAA+AGG - chr7.3:75626069-75626088 MS.gene062456:intron 40.0%
CACAACAATTCCAACCAAGA+AGG - chr7.3:75625819-75625838 MS.gene062456:intron 40.0%
CATGATGTTGTTCTTGTTGG+TGG - chr7.3:75625562-75625581 MS.gene062456:CDS 40.0%
CTGTTGCAGGATTTCTTCAA+TGG - chr7.3:75625613-75625632 MS.gene062456:intron 40.0%
GAAATACAAGGCAGAAGATG+AGG - chr7.3:75626137-75626156 MS.gene062456:intron 40.0%
GGTAGATGCAAAGAATGCTT+TGG - chr7.3:75626173-75626192 MS.gene062456:intron 40.0%
GTGTTTGAGAGATGCTAAGA+TGG - chr7.3:75625525-75625544 MS.gene062456:CDS 40.0%
GTTGGAATTGTTGTGTTCCT+TGG + chr7.3:75625814-75625833 None:intergenic 40.0%
TAAACTTGGATCAAGACACC+GGG + chr7.3:75625877-75625896 None:intergenic 40.0%
TAAGTTCCTCAAACCTAGCA+CGG + chr7.3:75625465-75625484 None:intergenic 40.0%
TATCTTGAATGTCTCTGCTG+AGG - chr7.3:75626020-75626039 MS.gene062456:intron 40.0%
TCATGACAGTTCTCATTCCA+AGG - chr7.3:75625794-75625813 MS.gene062456:intron 40.0%
TCTCTCAAACACTTCTCAAC+AGG + chr7.3:75625517-75625536 None:intergenic 40.0%
TGAGGAAGCAGAGAAATACA+AGG - chr7.3:75626125-75626144 MS.gene062456:intron 40.0%
TGCAACAGTTGCTGAACTTT+GGG + chr7.3:75625601-75625620 None:intergenic 40.0%
TGCTTTGACATTGATGCCAA+CGG - chr7.3:75625997-75626016 MS.gene062456:intron 40.0%
TTCAGAGTGACATGAAGTTG+TGG - chr7.3:75624807-75624826 MS.gene062456:CDS 40.0%
TTGGGTAAATTCGAGCTTTC+CGG - chr7.3:75625934-75625953 MS.gene062456:intron 40.0%
! AAAACTTGCTCCTTCTTGGT+TGG + chr7.3:75625832-75625851 None:intergenic 40.0%
! AACCCTGTTAACACCGTTTT+CGG - chr7.3:75624074-75624093 MS.gene062456:CDS 40.0%
! ACCCGAGATAACAACTTGTT+GGG - chr7.3:75625916-75625935 MS.gene062456:intron 40.0%
! AGAGAAAACTTGCTCCTTCT+TGG + chr7.3:75625836-75625855 None:intergenic 40.0%
! CATGAAGTTGTGGCCTTTTA+AGG - chr7.3:75624817-75624836 MS.gene062456:CDS 40.0%
! GTTTCTAGACCAAGAGACAA+TGG + chr7.3:75625763-75625782 None:intergenic 40.0%
! TACCGAAAACGGTGTTAACA+GGG + chr7.3:75624079-75624098 None:intergenic 40.0%
! TAGCAATGATTGGGTTGCAA+AGG + chr7.3:75626374-75626393 None:intergenic 40.0%
! TGCGTATGGTCTTGACAAAA+AGG - chr7.3:75625105-75625124 MS.gene062456:CDS 40.0%
! TTACCGAAAACGGTGTTAAC+AGG + chr7.3:75624080-75624099 None:intergenic 40.0%
AAAGGAGAAGGTCCTGCAAT+CGG - chr7.3:75623891-75623910 MS.gene062456:CDS 45.0%
AAGTTCCTCAAACCTAGCAC+GGG + chr7.3:75625464-75625483 None:intergenic 45.0%
AATAACACCGGCATCCTTTG+TGG + chr7.3:75625035-75625054 None:intergenic 45.0%
ACATACTCAGACAACCAACC+CGG - chr7.3:75625856-75625875 MS.gene062456:intron 45.0%
AGACAACCTTCCTTTGTCGT+TGG + chr7.3:75626082-75626101 None:intergenic 45.0%
ATGTAGCCAACCCAATTGAG+TGG - chr7.3:75624550-75624569 MS.gene062456:CDS 45.0%
CAAAATCTTCGCCACCAAGA+TGG + chr7.3:75625249-75625268 None:intergenic 45.0%
CAAACCTTACCCCACTCAAT+TGG + chr7.3:75624564-75624583 None:intergenic 45.0%
CAAAGTTCAGCAACTGTTGC+AGG - chr7.3:75625600-75625619 MS.gene062456:intron 45.0%
CAATTGAGTGGGGTAAGGTT+TGG - chr7.3:75624562-75624581 MS.gene062456:CDS 45.0%
CACCACTCAATATAGCTGCT+TGG + chr7.3:75625696-75625715 None:intergenic 45.0%
CATAAGCAACAGCCTCATCT+GGG + chr7.3:75625663-75625682 None:intergenic 45.0%
CATACTCGTGTGTTGGAGTA+TGG - chr7.3:75623931-75623950 MS.gene062456:CDS 45.0%
CCTGCAATCGGAATAGATCT+GGG - chr7.3:75623903-75623922 MS.gene062456:CDS 45.0%
CGACAAAGGAAGGTTGTCTA+AGG - chr7.3:75626083-75626102 MS.gene062456:intron 45.0%
CTGCAACAGTTGCTGAACTT+TGG + chr7.3:75625602-75625621 None:intergenic 45.0%
CTGCTGAGGACAAAACAACT+GGG - chr7.3:75626034-75626053 MS.gene062456:intron 45.0%
CTGTGATTTGAGGAACACCA+CGG + chr7.3:75625975-75625994 None:intergenic 45.0%
GACAAAAAGGCGACAAGTGT+TGG - chr7.3:75625118-75625137 MS.gene062456:CDS 45.0%
GAGATCATCGCCAATGATCA+AGG - chr7.3:75623969-75623988 MS.gene062456:CDS 45.0%
GAGATTGCCGAAGCTTATCT+TGG - chr7.3:75624947-75624966 MS.gene062456:CDS 45.0%
GAGTGGTGAAGGAAACGAAA+AGG - chr7.3:75625708-75625727 MS.gene062456:intron 45.0%
GATGTGACTCCATTGTCTCT+TGG - chr7.3:75625751-75625770 MS.gene062456:intron 45.0%
GCAGCTATATTGAGTGGTGA+AGG - chr7.3:75625697-75625716 MS.gene062456:intron 45.0%
GCAGGATTTCTTCAATGGCA+AGG - chr7.3:75625618-75625637 MS.gene062456:intron 45.0%
GCTAAGATGTATCAAGGTGG+AGG - chr7.3:75626390-75626409 MS.gene062456:CDS 45.0%
GGAACAACATACTCGTGTGT+TGG - chr7.3:75623924-75623943 MS.gene062456:CDS 45.0%
GGACCAGCAGTAACCTTAAA+AGG + chr7.3:75624833-75624852 None:intergenic 45.0%
GGTACGGTTTCCTTGATCAT+TGG + chr7.3:75623982-75624001 None:intergenic 45.0%
GTCCAAGCAGCTATATTGAG+TGG - chr7.3:75625691-75625710 MS.gene062456:intron 45.0%
TCCTGCAATCGGAATAGATC+TGG - chr7.3:75623902-75623921 MS.gene062456:CDS 45.0%
TCTCTTGGTCTAGAAACTGC+TGG - chr7.3:75625766-75625785 MS.gene062456:intron 45.0%
TCTGCTGAGGACAAAACAAC+TGG - chr7.3:75626033-75626052 MS.gene062456:intron 45.0%
TGTAGCCAACCCAATTGAGT+GGG - chr7.3:75624551-75624570 MS.gene062456:CDS 45.0%
TGTGATTTGAGGAACACCAC+GGG + chr7.3:75625974-75625993 None:intergenic 45.0%
! TCAATCTCCGAAGTGCTCTA+GGG + chr7.3:75625339-75625358 None:intergenic 45.0%
! TGGTGTTAACTACAAGGGTG+AGG - chr7.3:75624871-75624890 MS.gene062456:CDS 45.0%
! TTTAAGGTTACTGCTGGTCC+TGG - chr7.3:75624833-75624852 MS.gene062456:CDS 45.0%
! TTTGAAGTTAAGGCCACTGC+TGG - chr7.3:75625217-75625236 MS.gene062456:CDS 45.0%
!! CAAGAGTATCAACCCAGATG+AGG - chr7.3:75625648-75625667 MS.gene062456:intron 45.0%
!!! TGGCCTTTTAAGGTTACTGC+TGG - chr7.3:75624827-75624846 MS.gene062456:CDS 45.0%
!!! TTTTTATATTGAAATTTAAT+TGG - chr7.3:75624688-75624707 MS.gene062456:CDS 5.0%
AAAAGCAACGTAAGACGGCG+TGG + chr7.3:75624003-75624022 None:intergenic 50.0%
AAACCTAGCACGGGTGATTG+TGG + chr7.3:75625455-75625474 None:intergenic 50.0%
AAGATGGGTATCACCAGCAG+TGG + chr7.3:75625233-75625252 None:intergenic 50.0%
AATCACCCGTGCTAGGTTTG+AGG - chr7.3:75625456-75625475 MS.gene062456:CDS 50.0%
ACTGCAGCAGCTATTGCGTA+TGG - chr7.3:75625091-75625110 MS.gene062456:CDS 50.0%
ACTGCTGGTGATACCCATCT+TGG - chr7.3:75625232-75625251 MS.gene062456:CDS 50.0%
ACTGGTTACTGTCCAACCAC+TGG + chr7.3:75626305-75626324 None:intergenic 50.0%
ACTGTCCAACCACTGGATTG+CGG + chr7.3:75626298-75626317 None:intergenic 50.0%
ATCCTTTGTGGCTTGACGCT+GGG + chr7.3:75625023-75625042 None:intergenic 50.0%
CAACCCAATTGAGTGGGGTA+AGG - chr7.3:75624557-75624576 MS.gene062456:CDS 50.0%
CCATAAGCAACAGCCTCATC+TGG + chr7.3:75625664-75625683 None:intergenic 50.0%
CCATCACCAACGACAAAGGA+AGG - chr7.3:75626073-75626092 MS.gene062456:intron 50.0%
CCCAGATCTATTCCGATTGC+AGG + chr7.3:75623906-75623925 None:intergenic 50.0%
CCTGGTGAAAAGCCCATGAT+TGG - chr7.3:75624851-75624870 MS.gene062456:CDS 50.0%
CGGTGATGCTGCTAAGAATC+AGG - chr7.3:75624043-75624062 MS.gene062456:CDS 50.0%
CTTACCCCACTCAATTGGGT+TGG + chr7.3:75624559-75624578 None:intergenic 50.0%
CTTGGTCTAGAAACTGCTGG+TGG - chr7.3:75625769-75625788 MS.gene062456:intron 50.0%
GTAGCCAACCCAATTGAGTG+GGG - chr7.3:75624552-75624571 MS.gene062456:CDS 50.0%
GTGATTTGAGGAACACCACG+GGG + chr7.3:75625973-75625992 None:intergenic 50.0%
GTGGTTGGACAGTAACCAGT+TGG - chr7.3:75626305-75626324 MS.gene062456:CDS 50.0%
TACGCAATAGCTGCTGCAGT+AGG + chr7.3:75625091-75625110 None:intergenic 50.0%
TCCATACCACCAGCCATATC+AGG + chr7.3:75626420-75626439 None:intergenic 50.0%
TCCTGATATGGCTGGTGGTA+TGG - chr7.3:75626416-75626435 MS.gene062456:CDS 50.0%
TGGGAGTCGTTGAAGTAAGC+TGG + chr7.3:75625004-75625023 None:intergenic 50.0%
! CCAATCATGGGCTTTTCACC+AGG + chr7.3:75624854-75624873 None:intergenic 50.0%
! CCAGATGAGGCTGTTGCTTA+TGG - chr7.3:75625661-75625680 MS.gene062456:intron 50.0%
! CCTTCCTTTGTCGTTGGTGA+TGG + chr7.3:75626076-75626095 None:intergenic 50.0%
! CTCAATCTCCGAAGTGCTCT+AGG + chr7.3:75625340-75625359 None:intergenic 50.0%
! GTGGTAACCCTAGAGCACTT+CGG - chr7.3:75625329-75625348 MS.gene062456:CDS 50.0%
! TGCAGGACCTTCTCCTTTTC+CGG + chr7.3:75623889-75623908 None:intergenic 50.0%
!! AAGGATGCCGGTGTTATTGC+TGG - chr7.3:75625037-75625056 MS.gene062456:CDS 50.0%
ACACCACAATCACCCGTGCT+AGG - chr7.3:75625449-75625468 MS.gene062456:CDS 55.0%
ACTCATCAGCCTCTGCCAAC+TGG + chr7.3:75626323-75626342 None:intergenic 55.0%
CAACGTAAGACGGCGTGGTA+CGG + chr7.3:75623998-75624017 None:intergenic 55.0%
CAATTGACGCCGCAATCCAG+TGG - chr7.3:75626286-75626305 MS.gene062456:CDS 55.0%
CATCCTTTGTGGCTTGACGC+TGG + chr7.3:75625024-75625043 None:intergenic 55.0%
CGTCAAGCCACAAAGGATGC+CGG - chr7.3:75625025-75625044 MS.gene062456:CDS 55.0%
CTTGGATCAAGACACCGGGT+TGG + chr7.3:75625873-75625892 None:intergenic 55.0%
GATGAAGTTCCTCCAGCAGC+AGG - chr7.3:75626441-75626460 MS.gene062456:CDS 55.0%
GCTGGTGATACCCATCTTGG+TGG - chr7.3:75625235-75625254 MS.gene062456:CDS 55.0%
GGACAGTAACCAGTTGGCAG+AGG - chr7.3:75626311-75626330 MS.gene062456:CDS 55.0%
!! AGGTGGAGGTGCTCCTGATA+TGG - chr7.3:75626404-75626423 MS.gene062456:CDS 55.0%
CTCCCAGCGTCAAGCCACAA+AGG - chr7.3:75625018-75625037 MS.gene062456:CDS 60.0%
GAAGTTCCTCCAGCAGCAGG+TGG - chr7.3:75626444-75626463 MS.gene062456:CDS 60.0%
GGTGCTCCTGATATGGCTGG+TGG - chr7.3:75626411-75626430 MS.gene062456:CDS 60.0%
TGACGCCGCAATCCAGTGGT+TGG - chr7.3:75626290-75626309 MS.gene062456:CDS 60.0%
!! GGAGGTGCTCCTGATATGGC+TGG - chr7.3:75626408-75626427 MS.gene062456:CDS 60.0%
ACGGGGAGCTGGAGGAATGC+CGG + chr7.3:75625956-75625975 None:intergenic 65.0%
TGAGGAACACCACGGGGAGC+TGG + chr7.3:75625967-75625986 None:intergenic 65.0%
CCAGCACCACCTGCTGCTGG+AGG + chr7.3:75626453-75626472 None:intergenic 70.0%
CCTCCAGCAGCAGGTGGTGC+TGG - chr7.3:75626450-75626469 MS.gene062456:CDS 70.0%
GGAACACCACGGGGAGCTGG+AGG + chr7.3:75625964-75625983 None:intergenic 70.0%
GGACCAGCACCACCTGCTGC+TGG + chr7.3:75626456-75626475 None:intergenic 70.0%
GGCATTCCTCCAGCTCCCCG+TGG - chr7.3:75625955-75625974 MS.gene062456:intron 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 75623882 75626497 75623882 ID=MS.gene062456
chr7.3 mRNA 75623882 75626497 75623882 ID=MS.gene062456.t1;Parent=MS.gene062456
chr7.3 exon 75626284 75626497 75626284 ID=MS.gene062456.t1.exon1;Parent=MS.gene062456.t1
chr7.3 CDS 75626284 75626497 75626284 ID=cds.MS.gene062456.t1;Parent=MS.gene062456.t1
chr7.3 exon 75623882 75625614 75623882 ID=MS.gene062456.t1.exon2;Parent=MS.gene062456.t1
chr7.3 CDS 75623882 75625614 75623882 ID=cds.MS.gene062456.t1;Parent=MS.gene062456.t1
Gene Sequence

>MS.gene062456

ATGGCCGGAAAAGGAGAAGGTCCTGCAATCGGAATAGATCTGGGAACAACATACTCGTGTGTTGGAGTATGGCAACACGATCGTGTCGAGATCATCGCCAATGATCAAGGAAACCGTACCACGCCGTCTTACGTTGCTTTTACTGATAGTGAACGATTGATCGGTGATGCTGCTAAGAATCAGGTCGCGATGAACCCTGTTAACACCGTTTTCGGTAAGATTTCGATTCTGAACATTCACATTATTAAAGTTTTGATTTTGATATGCAGATTGTGATTTCATTGTTATATGTACAGCATTGTCGTTATTACGTTATATATGTACATTGTAATTTTTTTTATTGTTGAAAATAAATAATTAATCTAGGGTTTTATCTGGTTAATATTCAATTATTTTTGTTGTGATTTGAAGCTTGTGAGTTCTTTAATGTATATGATGTTTGTTAAATTAAATAATTAATTATGAGATATGAAGATATGAACATTATATATGCTGTTATGTTATATTATATTTACTTTTATTCTTGTTGATTAATGAGGTTTAGAATAATTATATCCCTTACATTGAACGGTGAATTTGCAGTCATTTACTGAGTGTAATTTGTTTGATTTTTTGAGTTGGATTGGAATATGGTTTATAATGATAGAACATTATGGTGTAATTTGATCATGTAGCCAACCCAATTGAGTGGGGTAAGGTTTGGTTGTTGTTGATGATGAATGAGTCCGTGTCTTAATTAAATAGTATCATGCAAAAGATTGATTTAATATGATGATATTTGATAAGCTTGATTGTTATTTATTTATTTTTTATATTGAAATTTAATTGGTTTATTTAGAAGTTTGTTTGCTCATTGGTTATTTGGATGTGTATGATAAAACAGATGCTAAACGTTTGATTGGAAGGAGAGTTTCTGATGCATCTGTTCAGAGTGACATGAAGTTGTGGCCTTTTAAGGTTACTGCTGGTCCTGGTGAAAAGCCCATGATTGGTGTTAACTACAAGGGTGAGGACAAGCAATTTGCTGCTGAAGAAATTTCATCTATGGTGCTCATGAAGATGCGTGAGATTGCCGAAGCTTATCTTGGTTCAGCTGTGAAGAATGCTGTTGTTACAGTTCCAGCTTACTTCAACGACTCCCAGCGTCAAGCCACAAAGGATGCCGGTGTTATTGCTGGTTTGAATGTTATGAGGATTATCAATGAGCCTACTGCAGCAGCTATTGCGTATGGTCTTGACAAAAAGGCGACAAGTGTTGGCGAGAAGAATGTGTTGATTTTTGATTTGGGAGGTGGTACTTTTGATGTGTCTCTTCTTACTATTGAAGAGGGTATTTTTGAAGTTAAGGCCACTGCTGGTGATACCCATCTTGGTGGCGAAGATTTTGATAACAGAATGGTTAACCATTTTGTTCAAGAGTTTAAGAGGAAGAACAAGAAGGATATTAGTGGTAACCCTAGAGCACTTCGGAGATTGAGAACTGCTTGTGAGAGAGCGAAGAGAACTCTCTCATCTACTGCACAAACTACCATTGAGATTGATTCTTTGTTTGAGGGTGTTGATTTTTACACCACAATCACCCGTGCTAGGTTTGAGGAACTTAACATGGATCTGTTTAGAAAGTGTATGGAGCCTGTTGAGAAGTGTTTGAGAGATGCTAAGATGGACAAGAACTCTGTTCATGATGTTGTTCTTGTTGGTGGTTCAACTAGAATTCCCAAAGTTCAGCAACTGTTGCAGGATTTCTTCAATGGCAAGGAGCTTTGCAAGAGTATCAACCCAGATGAGGCTGTTGCTTATGGAGCTGCTGTCCAAGCAGCTATATTGAGTGGTGAAGGAAACGAAAAGGTTCAAGATTTGTTGCTTTTGGATGTGACTCCATTGTCTCTTGGTCTAGAAACTGCTGGTGGTGTCATGACAGTTCTCATTCCAAGGAACACAACAATTCCAACCAAGAAGGAGCAAGTTTTCTCTACATACTCAGACAACCAACCCGGTGTCTTGATCCAAGTTTATGAAGGTGAAAGAGCAAGAACCCGAGATAACAACTTGTTGGGTAAATTCGAGCTTTCCGGCATTCCTCCAGCTCCCCGTGGTGTTCCTCAAATCACAGTTTGCTTTGACATTGATGCCAACGGTATCTTGAATGTCTCTGCTGAGGACAAAACAACTGGGCAGAAGAACAAGATTACCATCACCAACGACAAAGGAAGGTTGTCTAAGGAAGAAATTGAGAAGATGGTTGAGGAAGCAGAGAAATACAAGGCAGAAGATGAGGAACACAAAAAGAAGGTAGATGCAAAGAATGCTTTGGAAAACTATGCTTACAACATGAGGAACACAATTAAAGACGAGAAGATTGGATCAAAGCTTTCCCCTGATGACAAAAAGAAGATTGATGATGCAATTGACGCCGCAATCCAGTGGTTGGACAGTAACCAGTTGGCAGAGGCTGATGAGTTTGAAGATAAGATGAAGGAACTTGAGAGCCTTTGCAACCCAATCATTGCTAAGATGTATCAAGGTGGAGGTGCTCCTGATATGGCTGGTGGTATGGATGATGAAGTTCCTCCAGCAGCAGGTGGTGCTGGTCCTAAGATTGAAGAAGTCGATTAA

Protein sequence

>MS.gene062456.t1

MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRVSDASVQSDMKLWPFKVTAGPGEKPMIGVNYKGEDKQFAAEEISSMVLMKMREIAEAYLGSAVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGVDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKNSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVEEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDEKIGSKLSPDDKKKIDDAIDAAIQWLDSNQLAEADEFEDKMKELESLCNPIIAKMYQGGGAPDMAGGMDDEVPPAAGGAGPKIEEVD