Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06293.t1 | XP_003602734.1 | 97.9 | 483 | 10 | 0 | 1 | 483 | 1 | 483 | 1.40E-277 | 964.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06293.t1 | Q9FI43 | 71.1 | 477 | 131 | 3 | 9 | 483 | 16 | 487 | 2.4e-198 | 693.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06293.t1 | G7J2S0 | 97.9 | 483 | 10 | 0 | 1 | 483 | 1 | 483 | 9.9e-278 | 964.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049178 | MS.gene06293 | 0.846792 | 1.74E-59 | -1.69E-46 |
MS.gene052856 | MS.gene06293 | 0.804508 | 2.09E-49 | -1.69E-46 |
MS.gene055313 | MS.gene06293 | 0.803458 | 3.45E-49 | -1.69E-46 |
MS.gene056830 | MS.gene06293 | -0.811199 | 7.89E-51 | -1.69E-46 |
MS.gene057360 | MS.gene06293 | 0.802258 | 6.11E-49 | -1.69E-46 |
MS.gene058852 | MS.gene06293 | 0.804402 | 2.20E-49 | -1.69E-46 |
MS.gene060869 | MS.gene06293 | 0.806487 | 8.03E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene044401 | MS.gene06293 | PPI |
MS.gene58411 | MS.gene06293 | PPI |
MS.gene061737 | MS.gene06293 | PPI |
MS.gene28396 | MS.gene06293 | PPI |
MS.gene57378 | MS.gene06293 | PPI |
MS.gene89800 | MS.gene06293 | PPI |
MS.gene70227 | MS.gene06293 | PPI |
MS.gene033106 | MS.gene06293 | PPI |
MS.gene57380 | MS.gene06293 | PPI |
MS.gene91577 | MS.gene06293 | PPI |
MS.gene75421 | MS.gene06293 | PPI |
MS.gene013810 | MS.gene06293 | PPI |
MS.gene89324 | MS.gene06293 | PPI |
MS.gene06293 | MS.gene055205 | PPI |
MS.gene045060 | MS.gene06293 | PPI |
MS.gene46108 | MS.gene06293 | PPI |
MS.gene030630 | MS.gene06293 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06293.t1 | MTR_3g098460 | 97.930 | 483 | 10 | 0 | 1 | 483 | 1 | 483 | 0.0 | 987 |
MS.gene06293.t1 | MTR_8g096050 | 79.665 | 477 | 97 | 0 | 7 | 483 | 29 | 505 | 0.0 | 804 |
MS.gene06293.t1 | MTR_7g084400 | 68.530 | 483 | 139 | 3 | 9 | 483 | 11 | 488 | 0.0 | 697 |
MS.gene06293.t1 | MTR_7g084400 | 64.286 | 406 | 142 | 2 | 9 | 412 | 11 | 415 | 0.0 | 549 |
MS.gene06293.t1 | MTR_7g084400 | 29.949 | 197 | 123 | 4 | 288 | 478 | 196 | 383 | 6.44e-20 | 92.4 |
MS.gene06293.t1 | MTR_8g027975 | 40.777 | 309 | 154 | 8 | 203 | 483 | 49 | 356 | 1.90e-67 | 221 |
MS.gene06293.t1 | MTR_5g009500 | 42.020 | 307 | 151 | 8 | 203 | 483 | 36 | 341 | 6.65e-66 | 216 |
MS.gene06293.t1 | MTR_3g107510 | 36.331 | 278 | 173 | 3 | 203 | 480 | 120 | 393 | 5.17e-53 | 184 |
MS.gene06293.t1 | MTR_1g012030 | 36.331 | 278 | 173 | 2 | 203 | 480 | 137 | 410 | 3.12e-52 | 182 |
MS.gene06293.t1 | MTR_1g012030 | 30.939 | 181 | 122 | 3 | 202 | 380 | 230 | 409 | 1.88e-17 | 84.7 |
MS.gene06293.t1 | MTR_4g114320 | 36.201 | 279 | 172 | 4 | 203 | 480 | 121 | 394 | 8.59e-50 | 175 |
MS.gene06293.t1 | MTR_6g091800 | 32.432 | 296 | 178 | 6 | 202 | 480 | 16 | 306 | 2.54e-45 | 161 |
MS.gene06293.t1 | MTR_7g064980 | 30.696 | 316 | 192 | 8 | 186 | 481 | 7 | 315 | 2.88e-45 | 161 |
MS.gene06293.t1 | MTR_7g064980 | 29.130 | 230 | 143 | 7 | 165 | 384 | 98 | 317 | 6.59e-22 | 96.7 |
MS.gene06293.t1 | MTR_3g104600 | 30.945 | 307 | 177 | 7 | 203 | 482 | 33 | 331 | 3.36e-44 | 159 |
MS.gene06293.t1 | MTR_3g104600 | 27.184 | 206 | 122 | 5 | 299 | 483 | 35 | 233 | 9.75e-16 | 79.0 |
MS.gene06293.t1 | MTR_6g091800 | 30.312 | 320 | 177 | 7 | 202 | 480 | 16 | 330 | 4.76e-43 | 155 |
MS.gene06293.t1 | MTR_2g436930 | 31.475 | 305 | 169 | 6 | 207 | 474 | 17 | 318 | 2.51e-41 | 150 |
MS.gene06293.t1 | MTR_2g436930 | 29.381 | 194 | 118 | 4 | 301 | 478 | 17 | 207 | 9.63e-20 | 90.5 |
MS.gene06293.t1 | MTR_5g081150 | 33.788 | 293 | 172 | 9 | 205 | 480 | 34 | 321 | 3.92e-41 | 150 |
MS.gene06293.t1 | MTR_5g081150 | 29.958 | 237 | 141 | 7 | 157 | 378 | 92 | 318 | 6.77e-19 | 88.2 |
MS.gene06293.t1 | MTR_5g081150 | 32.663 | 199 | 115 | 5 | 292 | 477 | 27 | 219 | 1.34e-14 | 75.1 |
MS.gene06293.t1 | MTR_7g068340 | 31.502 | 273 | 161 | 7 | 216 | 478 | 98 | 354 | 3.16e-38 | 143 |
MS.gene06293.t1 | MTR_7g068340 | 29.545 | 176 | 111 | 4 | 310 | 480 | 98 | 265 | 2.86e-17 | 84.0 |
MS.gene06293.t1 | MTR_7g068340 | 24.713 | 174 | 124 | 2 | 207 | 380 | 189 | 355 | 3.89e-14 | 74.3 |
MS.gene06293.t1 | MTR_4g119770 | 28.662 | 314 | 182 | 6 | 207 | 481 | 16 | 326 | 2.31e-37 | 140 |
MS.gene06293.t1 | MTR_4g119770 | 23.671 | 207 | 130 | 6 | 198 | 379 | 120 | 323 | 2.11e-11 | 65.5 |
MS.gene06293.t1 | MTR_6g091800 | 29.139 | 302 | 168 | 7 | 202 | 462 | 16 | 312 | 2.77e-36 | 136 |
MS.gene06293.t1 | MTR_7g109135 | 30.928 | 291 | 176 | 7 | 207 | 480 | 24 | 306 | 6.16e-36 | 135 |
MS.gene06293.t1 | MTR_1g087840 | 31.673 | 281 | 167 | 6 | 217 | 480 | 31 | 303 | 3.16e-34 | 131 |
MS.gene06293.t1 | MTR_6g091800 | 29.252 | 294 | 149 | 6 | 202 | 480 | 16 | 265 | 3.55e-34 | 130 |
MS.gene06293.t1 | MTR_6g034145 | 29.921 | 254 | 159 | 4 | 241 | 480 | 4 | 252 | 6.34e-34 | 129 |
MS.gene06293.t1 | MTR_6g034145 | 25.510 | 196 | 119 | 5 | 205 | 379 | 61 | 250 | 4.50e-13 | 69.7 |
MS.gene06293.t1 | MTR_6g091800 | 32.203 | 236 | 140 | 5 | 202 | 422 | 16 | 246 | 1.35e-33 | 128 |
MS.gene06293.t1 | MTR_6g091800 | 33.500 | 200 | 112 | 4 | 296 | 480 | 16 | 209 | 8.35e-26 | 106 |
MS.gene06293.t1 | MTR_3g074490 | 31.908 | 304 | 179 | 8 | 200 | 483 | 111 | 406 | 2.71e-32 | 127 |
MS.gene06293.t1 | MTR_8g090210 | 31.013 | 316 | 184 | 9 | 193 | 483 | 94 | 400 | 3.49e-32 | 127 |
MS.gene06293.t1 | MTR_6g092210 | 29.032 | 248 | 163 | 4 | 241 | 480 | 4 | 246 | 4.19e-32 | 123 |
MS.gene06293.t1 | MTR_6g092210 | 25.789 | 190 | 120 | 5 | 205 | 379 | 61 | 244 | 2.96e-12 | 67.0 |
MS.gene06293.t1 | MTR_6g091800 | 27.358 | 318 | 148 | 7 | 202 | 480 | 16 | 289 | 4.35e-32 | 124 |
MS.gene06293.t1 | MTR_6g091800 | 29.615 | 260 | 139 | 6 | 202 | 422 | 16 | 270 | 1.60e-31 | 123 |
MS.gene06293.t1 | MTR_6g091800 | 30.804 | 224 | 110 | 5 | 296 | 480 | 16 | 233 | 9.38e-23 | 98.6 |
MS.gene06293.t1 | MTR_4g016730 | 29.316 | 307 | 175 | 8 | 185 | 478 | 76 | 353 | 9.51e-31 | 122 |
MS.gene06293.t1 | MTR_7g109135 | 29.553 | 291 | 173 | 8 | 207 | 480 | 24 | 299 | 2.39e-30 | 120 |
MS.gene06293.t1 | MTR_3g104500 | 26.367 | 311 | 193 | 8 | 196 | 482 | 25 | 323 | 9.75e-30 | 119 |
MS.gene06293.t1 | MTR_7g109135 | 31.915 | 235 | 143 | 6 | 255 | 480 | 2 | 228 | 1.59e-29 | 116 |
MS.gene06293.t1 | MTR_4g005330 | 28.571 | 301 | 183 | 8 | 205 | 483 | 66 | 356 | 2.31e-29 | 119 |
MS.gene06293.t1 | MTR_5g055410 | 32.734 | 278 | 168 | 10 | 217 | 480 | 33 | 305 | 4.69e-29 | 117 |
MS.gene06293.t1 | MTR_4g005330 | 28.333 | 300 | 183 | 8 | 206 | 483 | 1 | 290 | 1.81e-28 | 114 |
MS.gene06293.t1 | MTR_2g436930 | 29.825 | 228 | 141 | 4 | 265 | 474 | 2 | 228 | 2.27e-27 | 110 |
MS.gene06293.t1 | MTR_2g436930 | 24.638 | 207 | 128 | 7 | 198 | 379 | 29 | 232 | 7.06e-12 | 65.9 |
MS.gene06293.t1 | MTR_7g109135 | 35.057 | 174 | 99 | 4 | 315 | 480 | 40 | 207 | 1.16e-26 | 107 |
MS.gene06293.t1 | MTR_4g012850 | 26.389 | 288 | 201 | 6 | 192 | 474 | 5 | 286 | 1.95e-26 | 109 |
MS.gene06293.t1 | MTR_3g025800 | 28.221 | 326 | 191 | 9 | 192 | 481 | 14 | 332 | 3.49e-26 | 109 |
MS.gene06293.t1 | MTR_6g091910 | 30.808 | 198 | 119 | 4 | 296 | 480 | 16 | 208 | 9.99e-26 | 105 |
MS.gene06293.t1 | MTR_6g091910 | 27.179 | 195 | 121 | 4 | 202 | 379 | 16 | 206 | 6.61e-18 | 82.8 |
MS.gene06293.t1 | MTR_1g095780 | 21.286 | 451 | 326 | 10 | 35 | 481 | 360 | 785 | 4.71e-25 | 109 |
MS.gene06293.t1 | MTR_8g076760 | 29.537 | 281 | 176 | 7 | 221 | 482 | 30 | 307 | 3.31e-24 | 103 |
MS.gene06293.t1 | MTR_8g076760 | 27.326 | 172 | 118 | 4 | 313 | 480 | 28 | 196 | 4.25e-16 | 79.3 |
MS.gene06293.t1 | MTR_8g107270 | 26.596 | 282 | 187 | 6 | 203 | 468 | 16 | 293 | 3.97e-24 | 103 |
MS.gene06293.t1 | MTR_4g119770 | 27.823 | 248 | 146 | 5 | 207 | 424 | 16 | 260 | 1.15e-23 | 100 |
MS.gene06293.t1 | MTR_4g119770 | 29.082 | 196 | 118 | 4 | 301 | 478 | 16 | 208 | 1.02e-20 | 92.0 |
MS.gene06293.t1 | MTR_5g081150 | 32.273 | 220 | 129 | 7 | 205 | 409 | 34 | 248 | 1.25e-22 | 97.4 |
MS.gene06293.t1 | MTR_5g081150 | 32.500 | 200 | 116 | 5 | 292 | 478 | 27 | 220 | 3.79e-15 | 75.9 |
MS.gene06293.t1 | MTR_5g081150 | 32.273 | 220 | 129 | 7 | 205 | 409 | 34 | 248 | 1.60e-22 | 97.1 |
MS.gene06293.t1 | MTR_5g081150 | 32.500 | 200 | 116 | 5 | 292 | 478 | 27 | 220 | 3.21e-15 | 75.9 |
MS.gene06293.t1 | MTR_5g073040 | 27.972 | 286 | 184 | 8 | 203 | 477 | 37 | 311 | 4.28e-22 | 97.4 |
MS.gene06293.t1 | MTR_5g073040 | 28.962 | 183 | 122 | 2 | 299 | 481 | 39 | 213 | 1.32e-19 | 90.1 |
MS.gene06293.t1 | MTR_6g091800 | 33.714 | 175 | 95 | 4 | 296 | 455 | 16 | 184 | 3.95e-20 | 88.6 |
MS.gene06293.t1 | MTR_6g091800 | 38.400 | 125 | 73 | 3 | 202 | 323 | 16 | 139 | 3.39e-19 | 85.9 |
MS.gene06293.t1 | MTR_2g102010 | 26.481 | 287 | 203 | 4 | 200 | 481 | 12 | 295 | 8.00e-20 | 90.1 |
MS.gene06293.t1 | MTR_8g098240 | 26.027 | 292 | 190 | 8 | 201 | 483 | 316 | 590 | 2.25e-19 | 91.7 |
MS.gene06293.t1 | MTR_3g028590 | 27.907 | 301 | 184 | 10 | 192 | 468 | 81 | 372 | 3.28e-19 | 89.7 |
MS.gene06293.t1 | MTR_3g028590 | 27.907 | 301 | 184 | 10 | 192 | 468 | 77 | 368 | 3.38e-19 | 89.7 |
MS.gene06293.t1 | MTR_6g091800 | 38.400 | 125 | 73 | 3 | 202 | 323 | 16 | 139 | 4.97e-19 | 85.9 |
MS.gene06293.t1 | MTR_6g091800 | 30.653 | 199 | 93 | 5 | 296 | 455 | 16 | 208 | 3.54e-17 | 80.5 |
MS.gene06293.t1 | MTR_1g097890 | 26.259 | 278 | 177 | 7 | 206 | 480 | 52 | 304 | 1.79e-18 | 86.7 |
MS.gene06293.t1 | MTR_5g030530 | 27.815 | 302 | 185 | 10 | 202 | 480 | 5 | 296 | 1.86e-18 | 86.3 |
MS.gene06293.t1 | MTR_8g066975 | 26.797 | 306 | 183 | 7 | 202 | 480 | 5 | 296 | 1.98e-18 | 86.3 |
MS.gene06293.t1 | MTR_5g081910 | 26.792 | 265 | 158 | 9 | 245 | 476 | 54 | 315 | 1.02e-17 | 84.7 |
MS.gene06293.t1 | MTR_5g081910 | 29.858 | 211 | 119 | 8 | 292 | 476 | 34 | 241 | 1.43e-17 | 82.8 |
MS.gene06293.t1 | MTR_8g036880 | 26.690 | 281 | 185 | 6 | 205 | 468 | 102 | 378 | 1.60e-17 | 84.7 |
MS.gene06293.t1 | MTR_8g092080 | 26.619 | 278 | 176 | 6 | 206 | 480 | 53 | 305 | 3.96e-17 | 82.8 |
MS.gene06293.t1 | MTR_8g092080 | 30.556 | 180 | 100 | 6 | 299 | 477 | 52 | 207 | 1.88e-14 | 74.7 |
MS.gene06293.t1 | MTR_4g057850 | 24.742 | 291 | 185 | 10 | 206 | 476 | 23 | 299 | 5.66e-17 | 82.0 |
MS.gene06293.t1 | MTR_1g090330 | 28.090 | 178 | 118 | 4 | 288 | 459 | 4 | 177 | 2.32e-16 | 80.1 |
MS.gene06293.t1 | MTR_1g090330 | 23.404 | 282 | 198 | 7 | 210 | 478 | 19 | 295 | 4.18e-16 | 79.3 |
MS.gene06293.t1 | MTR_1g088995 | 25.874 | 286 | 199 | 6 | 204 | 483 | 32 | 310 | 2.48e-16 | 80.1 |
MS.gene06293.t1 | MTR_4g078545 | 28.470 | 281 | 179 | 9 | 205 | 468 | 75 | 350 | 2.94e-16 | 80.9 |
MS.gene06293.t1 | MTR_1g036280 | 27.113 | 284 | 148 | 12 | 253 | 482 | 79 | 357 | 3.46e-16 | 80.5 |
MS.gene06293.t1 | MTR_6g015860 | 24.918 | 305 | 207 | 7 | 192 | 478 | 4 | 304 | 5.18e-16 | 79.3 |
MS.gene06293.t1 | MTR_6g015860 | 24.599 | 187 | 133 | 5 | 299 | 480 | 18 | 201 | 2.94e-11 | 65.1 |
MS.gene06293.t1 | MTR_4g018750 | 26.190 | 294 | 184 | 9 | 205 | 478 | 15 | 295 | 9.00e-16 | 78.2 |
MS.gene06293.t1 | MTR_2g098070 | 28.470 | 281 | 179 | 9 | 205 | 468 | 66 | 341 | 2.18e-15 | 77.8 |
MS.gene06293.t1 | MTR_6g034515 | 24.436 | 266 | 182 | 6 | 221 | 477 | 83 | 338 | 5.13e-15 | 77.0 |
MS.gene06293.t1 | MTR_3g100570 | 24.684 | 316 | 191 | 7 | 203 | 480 | 4 | 310 | 8.13e-15 | 75.5 |
MS.gene06293.t1 | MTR_7g015870 | 25.000 | 308 | 187 | 9 | 200 | 478 | 20 | 312 | 1.18e-14 | 75.1 |
MS.gene06293.t1 | MTR_7g015870 | 28.500 | 200 | 115 | 6 | 206 | 383 | 123 | 316 | 8.65e-12 | 66.6 |
MS.gene06293.t1 | MTR_7g015870 | 25.000 | 308 | 187 | 9 | 200 | 478 | 16 | 308 | 5.81e-14 | 73.2 |
MS.gene06293.t1 | MTR_7g066690 | 24.832 | 298 | 183 | 8 | 205 | 478 | 17 | 297 | 1.19e-13 | 72.0 |
MS.gene06293.t1 | MTR_8g099910 | 26.984 | 252 | 160 | 8 | 207 | 441 | 74 | 318 | 1.45e-13 | 72.4 |
MS.gene06293.t1 | MTR_3g462140 | 25.753 | 299 | 194 | 7 | 198 | 478 | 8 | 296 | 1.63e-13 | 71.6 |
MS.gene06293.t1 | MTR_1g088995 | 26.923 | 156 | 107 | 3 | 303 | 457 | 37 | 186 | 2.12e-13 | 70.1 |
MS.gene06293.t1 | MTR_6g033280 | 26.446 | 242 | 157 | 7 | 206 | 433 | 64 | 298 | 8.79e-13 | 70.1 |
MS.gene06293.t1 | MTR_4g088545 | 27.368 | 190 | 125 | 4 | 300 | 480 | 13 | 198 | 9.18e-13 | 68.6 |
MS.gene06293.t1 | MTR_8g086070 | 22.887 | 284 | 203 | 7 | 203 | 478 | 19 | 294 | 1.43e-12 | 68.9 |
MS.gene06293.t1 | MTR_7g083790 | 29.289 | 239 | 149 | 9 | 207 | 431 | 83 | 315 | 1.69e-12 | 69.3 |
MS.gene06293.t1 | MTR_4g132070 | 29.655 | 145 | 95 | 3 | 19 | 157 | 381 | 524 | 1.84e-12 | 69.7 |
MS.gene06293.t1 | MTR_8g086070 | 30.723 | 166 | 103 | 5 | 302 | 463 | 24 | 181 | 2.58e-12 | 66.6 |
MS.gene06293.t1 | MTR_3g104810 | 23.810 | 336 | 211 | 9 | 184 | 478 | 10 | 341 | 2.68e-12 | 68.6 |
MS.gene06293.t1 | MTR_3g104810 | 33.333 | 156 | 83 | 5 | 249 | 383 | 190 | 345 | 6.62e-12 | 67.4 |
MS.gene06293.t1 | MTR_1g026190 | 30.822 | 146 | 92 | 4 | 19 | 157 | 372 | 515 | 3.09e-12 | 68.9 |
MS.gene06293.t1 | MTR_4g088545 | 27.368 | 190 | 125 | 4 | 300 | 480 | 13 | 198 | 3.24e-12 | 67.4 |
MS.gene06293.t1 | MTR_4g088545 | 27.368 | 190 | 125 | 4 | 300 | 480 | 13 | 198 | 4.28e-12 | 67.4 |
MS.gene06293.t1 | MTR_2g032610 | 23.891 | 293 | 202 | 10 | 200 | 474 | 24 | 313 | 5.77e-12 | 67.0 |
MS.gene06293.t1 | MTR_5g092810 | 30.556 | 144 | 93 | 3 | 20 | 157 | 383 | 525 | 6.49e-12 | 68.2 |
MS.gene06293.t1 | MTR_4g094578 | 22.535 | 284 | 197 | 9 | 205 | 477 | 29 | 300 | 1.03e-11 | 66.2 |
MS.gene06293.t1 | MTR_5g009830 | 29.801 | 151 | 97 | 4 | 12 | 157 | 353 | 499 | 1.50e-11 | 67.0 |
MS.gene06293.t1 | MTR_7g117030 | 22.619 | 252 | 175 | 7 | 247 | 481 | 88 | 336 | 4.24e-11 | 64.7 |
MS.gene06293.t1 | MTR_1g046950 | 27.206 | 136 | 91 | 1 | 34 | 161 | 5 | 140 | 9.74e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06293.t1 | AT5G51050 | 71.069 | 477 | 131 | 3 | 9 | 483 | 27 | 498 | 0.0 | 709 |
MS.gene06293.t1 | AT5G07320 | 70.737 | 475 | 131 | 2 | 9 | 483 | 13 | 479 | 0.0 | 704 |
MS.gene06293.t1 | AT5G61810 | 67.857 | 476 | 143 | 4 | 9 | 483 | 12 | 478 | 0.0 | 672 |
MS.gene06293.t1 | AT5G61810 | 69.767 | 344 | 94 | 4 | 141 | 483 | 1 | 335 | 1.26e-175 | 496 |
MS.gene06293.t1 | AT4G01100 | 40.952 | 315 | 145 | 8 | 203 | 483 | 40 | 347 | 4.06e-70 | 227 |
MS.gene06293.t1 | AT4G01100 | 39.877 | 326 | 147 | 8 | 203 | 483 | 40 | 361 | 1.18e-68 | 224 |
MS.gene06293.t1 | AT4G01100 | 40.594 | 303 | 139 | 8 | 215 | 483 | 2 | 297 | 5.05e-66 | 215 |
MS.gene06293.t1 | AT4G01100 | 26.857 | 175 | 123 | 1 | 308 | 477 | 1 | 175 | 1.79e-19 | 89.4 |
MS.gene06293.t1 | AT4G01100 | 27.919 | 197 | 119 | 4 | 207 | 380 | 97 | 293 | 3.47e-16 | 79.7 |
MS.gene06293.t1 | AT4G32400 | 37.413 | 286 | 172 | 5 | 197 | 480 | 105 | 385 | 4.94e-54 | 186 |
MS.gene06293.t1 | AT3G53940 | 34.114 | 299 | 179 | 7 | 198 | 481 | 66 | 361 | 4.68e-48 | 169 |
MS.gene06293.t1 | AT3G55640 | 33.444 | 302 | 183 | 7 | 191 | 477 | 24 | 322 | 1.18e-46 | 165 |
MS.gene06293.t1 | AT3G55640 | 33.444 | 302 | 183 | 7 | 191 | 477 | 24 | 322 | 1.18e-46 | 165 |
MS.gene06293.t1 | AT2G37890 | 31.429 | 315 | 186 | 8 | 188 | 480 | 26 | 332 | 1.58e-43 | 157 |
MS.gene06293.t1 | AT2G37890 | 30.603 | 232 | 150 | 5 | 157 | 380 | 103 | 331 | 2.92e-26 | 109 |
MS.gene06293.t1 | AT4G26180 | 30.435 | 299 | 185 | 6 | 202 | 482 | 18 | 311 | 3.05e-43 | 156 |
MS.gene06293.t1 | AT4G26180 | 35.149 | 202 | 112 | 4 | 296 | 483 | 18 | 214 | 6.45e-29 | 117 |
MS.gene06293.t1 | AT1G14560 | 31.010 | 287 | 166 | 8 | 216 | 477 | 38 | 317 | 3.30e-40 | 147 |
MS.gene06293.t1 | AT1G14560 | 29.474 | 190 | 113 | 4 | 310 | 483 | 38 | 222 | 8.49e-20 | 90.9 |
MS.gene06293.t1 | AT4G26180 | 29.749 | 279 | 173 | 6 | 202 | 462 | 18 | 291 | 1.67e-37 | 139 |
MS.gene06293.t1 | AT4G26180 | 35.149 | 202 | 112 | 4 | 296 | 483 | 18 | 214 | 3.13e-29 | 117 |
MS.gene06293.t1 | AT5G01500 | 31.502 | 273 | 161 | 9 | 216 | 478 | 130 | 386 | 2.93e-36 | 139 |
MS.gene06293.t1 | AT5G01500 | 30.114 | 176 | 110 | 4 | 310 | 480 | 130 | 297 | 8.17e-17 | 82.8 |
MS.gene06293.t1 | AT5G01500 | 27.586 | 174 | 119 | 2 | 207 | 380 | 221 | 387 | 4.97e-12 | 68.2 |
MS.gene06293.t1 | AT3G21390 | 29.545 | 308 | 173 | 6 | 207 | 474 | 21 | 324 | 5.61e-36 | 136 |
MS.gene06293.t1 | AT3G21390 | 30.729 | 192 | 116 | 5 | 301 | 478 | 21 | 209 | 3.42e-20 | 92.0 |
MS.gene06293.t1 | AT3G21390 | 29.545 | 308 | 173 | 6 | 207 | 474 | 43 | 346 | 6.27e-36 | 137 |
MS.gene06293.t1 | AT3G21390 | 30.729 | 192 | 116 | 5 | 301 | 478 | 43 | 231 | 4.02e-20 | 92.0 |
MS.gene06293.t1 | AT5G64970 | 31.975 | 319 | 177 | 9 | 191 | 483 | 121 | 425 | 6.23e-35 | 135 |
MS.gene06293.t1 | AT3G51870 | 29.044 | 272 | 169 | 7 | 216 | 478 | 102 | 358 | 9.63e-35 | 134 |
MS.gene06293.t1 | AT3G51870 | 27.807 | 187 | 125 | 3 | 207 | 390 | 193 | 372 | 7.60e-15 | 76.6 |
MS.gene06293.t1 | AT3G51870 | 27.933 | 179 | 116 | 4 | 310 | 483 | 102 | 272 | 3.74e-14 | 74.3 |
MS.gene06293.t1 | AT5G48970 | 28.710 | 310 | 174 | 8 | 207 | 474 | 24 | 328 | 5.83e-34 | 131 |
MS.gene06293.t1 | AT5G48970 | 30.612 | 196 | 113 | 6 | 301 | 478 | 24 | 214 | 6.33e-20 | 91.3 |
MS.gene06293.t1 | AT5G48970 | 22.967 | 209 | 132 | 5 | 198 | 379 | 126 | 332 | 1.57e-11 | 66.2 |
MS.gene06293.t1 | AT1G14560 | 29.779 | 272 | 159 | 8 | 216 | 462 | 38 | 302 | 7.45e-34 | 130 |
MS.gene06293.t1 | AT1G14560 | 29.474 | 190 | 113 | 4 | 310 | 483 | 38 | 222 | 4.89e-20 | 91.3 |
MS.gene06293.t1 | AT5G64970 | 31.908 | 304 | 167 | 9 | 206 | 483 | 12 | 301 | 2.08e-32 | 125 |
MS.gene06293.t1 | AT1G78180 | 31.683 | 303 | 181 | 6 | 200 | 483 | 123 | 418 | 2.18e-30 | 122 |
MS.gene06293.t1 | AT3G55640 | 31.897 | 232 | 142 | 5 | 191 | 409 | 24 | 252 | 2.19e-29 | 116 |
MS.gene06293.t1 | AT3G55640 | 28.571 | 203 | 130 | 4 | 287 | 478 | 26 | 224 | 7.75e-19 | 86.7 |
MS.gene06293.t1 | AT3G55640 | 31.897 | 232 | 142 | 5 | 191 | 409 | 24 | 252 | 2.19e-29 | 116 |
MS.gene06293.t1 | AT3G55640 | 28.571 | 203 | 130 | 4 | 287 | 478 | 26 | 224 | 7.75e-19 | 86.7 |
MS.gene06293.t1 | AT3G53940 | 33.333 | 225 | 134 | 5 | 198 | 409 | 66 | 287 | 8.36e-29 | 115 |
MS.gene06293.t1 | AT3G53940 | 32.367 | 207 | 126 | 5 | 280 | 477 | 57 | 258 | 3.16e-21 | 94.4 |
MS.gene06293.t1 | AT3G20240 | 27.213 | 305 | 190 | 8 | 198 | 480 | 45 | 339 | 2.13e-28 | 115 |
MS.gene06293.t1 | AT5G48970 | 28.295 | 258 | 163 | 5 | 238 | 474 | 1 | 257 | 2.37e-28 | 114 |
MS.gene06293.t1 | AT5G48970 | 31.944 | 144 | 88 | 3 | 340 | 478 | 5 | 143 | 6.14e-16 | 78.2 |
MS.gene06293.t1 | AT5G48970 | 22.967 | 209 | 132 | 5 | 198 | 379 | 55 | 261 | 2.46e-12 | 67.8 |
MS.gene06293.t1 | AT2G47490 | 30.072 | 276 | 177 | 5 | 217 | 480 | 29 | 300 | 2.78e-28 | 114 |
MS.gene06293.t1 | AT1G74240 | 28.852 | 305 | 184 | 6 | 205 | 480 | 36 | 336 | 4.49e-28 | 115 |
MS.gene06293.t1 | AT1G74240 | 29.126 | 206 | 119 | 4 | 299 | 481 | 36 | 237 | 9.45e-20 | 91.3 |
MS.gene06293.t1 | AT1G14560 | 32.663 | 199 | 110 | 5 | 299 | 477 | 25 | 219 | 4.76e-28 | 112 |
MS.gene06293.t1 | AT1G14560 | 27.500 | 200 | 116 | 5 | 205 | 379 | 25 | 220 | 1.07e-14 | 73.9 |
MS.gene06293.t1 | AT1G14560 | 27.273 | 121 | 72 | 2 | 379 | 483 | 4 | 124 | 3.02e-11 | 63.9 |
MS.gene06293.t1 | AT5G66380 | 30.241 | 291 | 184 | 7 | 207 | 480 | 12 | 300 | 6.65e-28 | 113 |
MS.gene06293.t1 | AT5G66380 | 28.571 | 189 | 119 | 4 | 211 | 384 | 116 | 303 | 4.44e-11 | 64.3 |
MS.gene06293.t1 | AT5G56450 | 25.497 | 302 | 195 | 6 | 203 | 481 | 32 | 326 | 9.59e-28 | 113 |
MS.gene06293.t1 | AT2G35800 | 21.978 | 455 | 323 | 12 | 35 | 481 | 380 | 810 | 3.47e-27 | 115 |
MS.gene06293.t1 | AT5G64970 | 30.537 | 298 | 167 | 9 | 191 | 462 | 121 | 404 | 3.96e-27 | 113 |
MS.gene06293.t1 | AT5G64970 | 28.492 | 179 | 120 | 3 | 299 | 477 | 135 | 305 | 1.26e-12 | 70.1 |
MS.gene06293.t1 | AT1G25380 | 28.261 | 276 | 176 | 7 | 217 | 476 | 33 | 302 | 6.82e-27 | 112 |
MS.gene06293.t1 | AT1G25380 | 28.261 | 276 | 176 | 7 | 217 | 476 | 33 | 302 | 6.82e-27 | 112 |
MS.gene06293.t1 | AT1G74240 | 28.028 | 289 | 175 | 6 | 221 | 480 | 4 | 288 | 2.05e-24 | 103 |
MS.gene06293.t1 | AT1G74240 | 28.646 | 192 | 110 | 5 | 313 | 481 | 2 | 189 | 1.96e-16 | 80.5 |
MS.gene06293.t1 | AT4G11440 | 26.733 | 303 | 196 | 8 | 192 | 482 | 317 | 605 | 8.52e-23 | 102 |
MS.gene06293.t1 | AT4G11440 | 26.733 | 303 | 196 | 8 | 192 | 482 | 317 | 605 | 8.52e-23 | 102 |
MS.gene06293.t1 | AT2G30160 | 28.720 | 289 | 182 | 8 | 203 | 477 | 40 | 318 | 1.49e-21 | 95.9 |
MS.gene06293.t1 | AT2G30160 | 27.322 | 183 | 123 | 4 | 299 | 480 | 42 | 215 | 1.47e-15 | 78.2 |
MS.gene06293.t1 | AT1G14140 | 24.161 | 298 | 205 | 8 | 195 | 477 | 6 | 297 | 2.03e-20 | 92.0 |
MS.gene06293.t1 | AT1G34065 | 26.689 | 296 | 187 | 8 | 191 | 481 | 59 | 329 | 2.70e-20 | 92.4 |
MS.gene06293.t1 | AT1G34065 | 26.689 | 296 | 187 | 8 | 191 | 481 | 66 | 336 | 3.03e-20 | 92.4 |
MS.gene06293.t1 | AT5G17400 | 25.517 | 290 | 196 | 6 | 195 | 468 | 4 | 289 | 5.74e-20 | 90.9 |
MS.gene06293.t1 | AT4G39460 | 28.520 | 277 | 174 | 6 | 205 | 480 | 58 | 311 | 6.20e-20 | 91.3 |
MS.gene06293.t1 | AT4G39460 | 28.520 | 277 | 174 | 6 | 205 | 480 | 58 | 311 | 6.20e-20 | 91.3 |
MS.gene06293.t1 | AT4G39460 | 28.520 | 277 | 174 | 6 | 205 | 480 | 58 | 311 | 6.20e-20 | 91.3 |
MS.gene06293.t1 | AT1G07030 | 28.421 | 285 | 185 | 8 | 203 | 477 | 38 | 313 | 9.43e-20 | 90.5 |
MS.gene06293.t1 | AT1G07030 | 28.962 | 183 | 120 | 4 | 299 | 480 | 40 | 213 | 6.55e-16 | 79.3 |
MS.gene06293.t1 | AT5G46800 | 26.230 | 305 | 195 | 8 | 199 | 480 | 2 | 299 | 1.13e-18 | 87.0 |
MS.gene06293.t1 | AT5G46800 | 26.230 | 305 | 195 | 8 | 199 | 480 | 2 | 299 | 1.13e-18 | 87.0 |
MS.gene06293.t1 | AT5G46800 | 26.230 | 305 | 195 | 8 | 199 | 480 | 2 | 299 | 1.13e-18 | 87.0 |
MS.gene06293.t1 | AT3G54110 | 27.551 | 294 | 184 | 9 | 203 | 478 | 13 | 295 | 1.97e-18 | 86.3 |
MS.gene06293.t1 | AT5G13490 | 27.273 | 286 | 177 | 7 | 205 | 468 | 88 | 364 | 1.06e-17 | 85.1 |
MS.gene06293.t1 | AT5G13490 | 27.273 | 286 | 177 | 7 | 205 | 468 | 88 | 364 | 1.06e-17 | 85.1 |
MS.gene06293.t1 | AT5G58970 | 26.962 | 293 | 183 | 9 | 205 | 478 | 16 | 296 | 1.09e-17 | 84.0 |
MS.gene06293.t1 | AT4G28390 | 27.758 | 281 | 181 | 9 | 205 | 468 | 83 | 358 | 1.26e-17 | 85.1 |
MS.gene06293.t1 | AT4G28390 | 27.758 | 281 | 181 | 9 | 205 | 468 | 83 | 358 | 1.26e-17 | 85.1 |
MS.gene06293.t1 | AT2G39970 | 27.511 | 229 | 134 | 8 | 280 | 482 | 101 | 323 | 3.71e-16 | 80.1 |
MS.gene06293.t1 | AT5G01340 | 24.390 | 287 | 192 | 10 | 206 | 476 | 18 | 295 | 3.99e-16 | 79.7 |
MS.gene06293.t1 | AT3G08580 | 25.267 | 281 | 189 | 6 | 205 | 468 | 84 | 360 | 7.40e-15 | 76.6 |
MS.gene06293.t1 | AT3G08580 | 25.267 | 281 | 189 | 6 | 205 | 468 | 84 | 360 | 7.40e-15 | 76.6 |
MS.gene06293.t1 | AT1G72820 | 23.676 | 321 | 212 | 7 | 191 | 478 | 16 | 336 | 7.74e-15 | 76.3 |
MS.gene06293.t1 | AT1G72820 | 26.512 | 215 | 122 | 7 | 208 | 388 | 131 | 343 | 5.32e-11 | 64.7 |
MS.gene06293.t1 | AT1G72820 | 23.676 | 321 | 212 | 7 | 191 | 478 | 16 | 336 | 7.74e-15 | 76.3 |
MS.gene06293.t1 | AT1G72820 | 26.512 | 215 | 122 | 7 | 208 | 388 | 131 | 343 | 5.32e-11 | 64.7 |
MS.gene06293.t1 | AT5G15640 | 24.759 | 311 | 206 | 9 | 195 | 483 | 11 | 315 | 8.46e-15 | 75.9 |
MS.gene06293.t1 | AT5G15640 | 30.952 | 210 | 122 | 8 | 190 | 380 | 106 | 311 | 2.84e-14 | 73.9 |
MS.gene06293.t1 | AT5G15640 | 30.952 | 210 | 122 | 8 | 190 | 380 | 113 | 318 | 2.98e-14 | 74.3 |
MS.gene06293.t1 | AT5G15640 | 24.510 | 306 | 203 | 9 | 200 | 483 | 23 | 322 | 4.11e-14 | 73.6 |
MS.gene06293.t1 | AT5G26200 | 24.752 | 303 | 203 | 7 | 200 | 478 | 34 | 335 | 3.97e-14 | 73.9 |
MS.gene06293.t1 | AT1G79900 | 22.593 | 270 | 201 | 2 | 211 | 480 | 22 | 283 | 7.30e-14 | 72.8 |
MS.gene06293.t1 | AT1G79900 | 28.402 | 169 | 117 | 3 | 208 | 375 | 112 | 277 | 8.94e-14 | 72.4 |
MS.gene06293.t1 | AT4G04720 | 31.944 | 144 | 91 | 3 | 20 | 157 | 370 | 512 | 7.99e-14 | 74.3 |
MS.gene06293.t1 | AT4G04720 | 31.944 | 144 | 91 | 3 | 20 | 157 | 370 | 512 | 7.99e-14 | 74.3 |
MS.gene06293.t1 | AT5G14040 | 29.032 | 248 | 158 | 9 | 208 | 441 | 84 | 327 | 4.96e-13 | 70.9 |
MS.gene06293.t1 | AT5G19760 | 23.860 | 285 | 199 | 8 | 203 | 478 | 16 | 291 | 5.85e-13 | 70.1 |
MS.gene06293.t1 | AT2G26360 | 23.571 | 280 | 196 | 6 | 203 | 480 | 113 | 376 | 8.09e-13 | 70.5 |
MS.gene06293.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.83e-12 | 69.7 |
MS.gene06293.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.83e-12 | 69.7 |
MS.gene06293.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.83e-12 | 69.7 |
MS.gene06293.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.83e-12 | 69.7 |
MS.gene06293.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.83e-12 | 69.7 |
MS.gene06293.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.83e-12 | 69.7 |
MS.gene06293.t1 | AT4G21940 | 30.556 | 144 | 93 | 3 | 20 | 157 | 392 | 534 | 2.02e-12 | 69.7 |
MS.gene06293.t1 | AT4G21940 | 30.556 | 144 | 93 | 3 | 20 | 157 | 392 | 534 | 2.03e-12 | 69.7 |
MS.gene06293.t1 | AT4G04695 | 29.730 | 148 | 97 | 3 | 20 | 161 | 322 | 468 | 6.54e-12 | 68.2 |
MS.gene06293.t1 | AT3G48850 | 27.237 | 257 | 162 | 9 | 204 | 441 | 66 | 316 | 1.54e-11 | 66.2 |
MS.gene06293.t1 | AT2G33820 | 23.607 | 305 | 198 | 12 | 203 | 483 | 16 | 309 | 2.27e-11 | 65.5 |
MS.gene06293.t1 | AT4G27940 | 27.727 | 220 | 128 | 8 | 193 | 387 | 195 | 408 | 3.17e-11 | 65.5 |
MS.gene06293.t1 | AT5G42130 | 25.094 | 267 | 180 | 8 | 221 | 477 | 134 | 390 | 6.05e-11 | 64.7 |
MS.gene06293.t1 | AT5G19360 | 31.111 | 135 | 87 | 3 | 28 | 157 | 368 | 501 | 8.38e-11 | 64.7 |
MS.gene06293.t1 | AT3G05290 | 24.662 | 296 | 184 | 12 | 207 | 476 | 13 | 295 | 8.67e-11 | 63.5 |
Find 109 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTAGGATGTGGGACAATTTC+TGG | 0.159419 | 3.1:-78053051 | MS.gene06293:CDS |
TTCTTTGATGGAGGGAATAA+TGG | 0.216426 | 3.1:-78055367 | MS.gene06293:CDS |
TAGAATTTGATTGCACTTTC+CGG | 0.232865 | 3.1:+78053562 | None:intergenic |
GAACAGTTCCGATGCTTATA+AGG | 0.241893 | 3.1:-78052831 | MS.gene06293:CDS |
ATCATGAATAATATATTTCT+TGG | 0.252850 | 3.1:+78053219 | None:intergenic |
GAACCCTCACAAAGAATATA+TGG | 0.303659 | 3.1:-78053351 | MS.gene06293:CDS |
CAATGAGTTTAGGAGATATA+TGG | 0.307264 | 3.1:-78055224 | MS.gene06293:CDS |
GGCACAACTTTGAGTAGATT+TGG | 0.313751 | 3.1:+78052740 | None:intergenic |
AGAGCATCCCAAAGCTCTTC+AGG | 0.318069 | 3.1:+78055133 | None:intergenic |
TTTCAGCATGAAGGCTTTAG+AGG | 0.319780 | 3.1:-78052782 | MS.gene06293:CDS |
CAAGGTAACAATTCGGATAT+TGG | 0.324252 | 3.1:-78053502 | MS.gene06293:CDS |
TATTCTTCCTGAAGAGCTTT+GGG | 0.324433 | 3.1:-78055140 | MS.gene06293:CDS |
TGATCTAGTGAAATGTTTCT+TGG | 0.329861 | 3.1:+78055454 | None:intergenic |
TATGGAAGCAAGATAATATA+CGG | 0.336371 | 3.1:-78053627 | MS.gene06293:CDS |
AGCTGCGAGCATTACTTATA+TGG | 0.341395 | 3.1:-78052717 | MS.gene06293:CDS |
GCGTGCTTGCTAATGTCTTC+AGG | 0.353904 | 3.1:+78053787 | None:intergenic |
GGGTTGATTACAATGAGTTT+AGG | 0.355020 | 3.1:-78055234 | MS.gene06293:CDS |
GGACTTCTTCCGTCTGTGAT+TGG | 0.367551 | 3.1:-78053298 | MS.gene06293:CDS |
GTATTCTTCCTGAAGAGCTT+TGG | 0.373610 | 3.1:-78055141 | MS.gene06293:CDS |
AGCTTTGGGATGCTCTTGAT+AGG | 0.382850 | 3.1:-78055126 | MS.gene06293:CDS |
TTTGTGAGGGTTCCAAGTTT+AGG | 0.385328 | 3.1:+78053361 | None:intergenic |
TTTCTTGGACATATCTTTCA+AGG | 0.392181 | 3.1:+78053234 | None:intergenic |
AACAGTTCCGATGCTTATAA+GGG | 0.400067 | 3.1:-78052830 | MS.gene06293:CDS |
TTTCTGCTGTGACGACAATA+TGG | 0.402693 | 3.1:-78053645 | MS.gene06293:CDS |
TCTTTGATGGAGGGAATAAT+GGG | 0.407756 | 3.1:-78055366 | MS.gene06293:CDS |
AATTCGGATATTGGTGCTGC+TGG | 0.411872 | 3.1:-78053493 | MS.gene06293:CDS |
GATCACGTGCTTGAGGCATT+AGG | 0.419468 | 3.1:-78055436 | MS.gene06293:CDS |
ATATATGGATGATAAGGAAT+TGG | 0.420302 | 3.1:-78055209 | MS.gene06293:CDS |
CAATGCTGCAGGAATAGAAA+TGG | 0.442718 | 3.1:-78053986 | MS.gene06293:intron |
GATCTAGTGAAATGTTTCTT+GGG | 0.443011 | 3.1:+78055455 | None:intergenic |
ACATTAGCAAGCACGCTAAC+CGG | 0.449483 | 3.1:-78053780 | MS.gene06293:CDS |
GGTGGAAGGGCTCCTAAACT+TGG | 0.458284 | 3.1:-78053373 | MS.gene06293:CDS |
TGGGATGCTCTTGATAGGGC+TGG | 0.459417 | 3.1:-78055121 | MS.gene06293:intron |
TAGGAGATATATGGATGATA+AGG | 0.460917 | 3.1:-78055215 | MS.gene06293:CDS |
CTTGCATATTTATACTCCGC+TGG | 0.463043 | 3.1:+78055295 | None:intergenic |
GATTATGTTCAGATAGAGAA+AGG | 0.470841 | 3.1:-78055337 | MS.gene06293:CDS |
CACGTTGACAAGGACAATAA+TGG | 0.472418 | 3.1:-78053934 | MS.gene06293:CDS |
TTGAAAATATATATCACCAT+TGG | 0.474683 | 3.1:-78053852 | MS.gene06293:CDS |
CTCCATCAAAGAAATTGAAA+AGG | 0.478589 | 3.1:+78055377 | None:intergenic |
GCGAGATCAATGCCAGCATA+AGG | 0.481632 | 3.1:+78053268 | None:intergenic |
TGAAAATATATATCACCATT+GGG | 0.482057 | 3.1:-78053851 | MS.gene06293:CDS |
TAGGTGAATCAAAAGAAGAA+AGG | 0.482226 | 3.1:-78055417 | MS.gene06293:CDS |
AAATATATTATTCATGATAG+TGG | 0.486766 | 3.1:-78053214 | MS.gene06293:intron |
AGAGGAGCTTGCTCGCTTTG+TGG | 0.489148 | 3.1:-78053959 | MS.gene06293:CDS |
GGGACAATTTCTGGAACCCT+TGG | 0.491674 | 3.1:-78053042 | MS.gene06293:CDS |
CTATGGATCTTATCAAAACT+AGG | 0.493639 | 3.1:-78053417 | MS.gene06293:CDS |
TCCTAGTTGTACTAGAGGAC+CGG | 0.496637 | 3.1:+78053068 | None:intergenic |
CAGCGATAAAATATTTGCTC+CGG | 0.498497 | 3.1:+78053761 | None:intergenic |
AGGTGAATCAAAAGAAGAAA+GGG | 0.504788 | 3.1:-78055416 | MS.gene06293:CDS |
TTTATCGCTGGAGGAATAGC+AGG | 0.510692 | 3.1:-78053748 | MS.gene06293:CDS |
CACTGCAGGTTATTCGTACT+AGG | 0.514009 | 3.1:-78053002 | MS.gene06293:intron |
CTTGGTCTCCAATGTCTACA+TGG | 0.514430 | 3.1:+78053818 | None:intergenic |
ATTATGTTCAGATAGAGAAA+GGG | 0.519083 | 3.1:-78055336 | MS.gene06293:CDS |
AATCCATATATTCTTTGTGA+GGG | 0.521242 | 3.1:+78053348 | None:intergenic |
ATTGGCATGATTCCTTATGC+TGG | 0.525188 | 3.1:-78053280 | MS.gene06293:CDS |
TACATGTGTCTATCCACTGC+AGG | 0.526699 | 3.1:-78053016 | MS.gene06293:CDS |
GTGATGCTAATAGTGATGGT+AGG | 0.526788 | 3.1:-78055255 | MS.gene06293:CDS |
AGATGCTCAAGGTAACAATT+CGG | 0.534432 | 3.1:-78053509 | MS.gene06293:CDS |
TGTCTTCAGGAATGACAGCT+TGG | 0.536068 | 3.1:+78053800 | None:intergenic |
CCTCTAGTACAACTAGGATG+TGG | 0.540484 | 3.1:-78053063 | MS.gene06293:CDS |
GCAGACCGCAATCTATCCTA+TGG | 0.541450 | 3.1:-78053434 | MS.gene06293:CDS |
GCTATTGATGTTGAACATAG+TGG | 0.542144 | 3.1:-78055166 | MS.gene06293:CDS |
AGGAGCCCTTCCACCTTCAG+AGG | 0.542507 | 3.1:+78053381 | None:intergenic |
ATATAAGTAATGCTCGCAGC+TGG | 0.542695 | 3.1:+78052719 | None:intergenic |
ATGGAAGCAAGATAATATAC+GGG | 0.544706 | 3.1:-78053626 | MS.gene06293:CDS |
GCTTTGGGATGCTCTTGATA+GGG | 0.545989 | 3.1:-78055125 | MS.gene06293:CDS |
GGCTTTAGAGGTTTCTACAA+AGG | 0.549054 | 3.1:-78052770 | MS.gene06293:CDS |
AGGAATAGAAATGGATGAAG+AGG | 0.553086 | 3.1:-78053977 | MS.gene06293:CDS |
CAACTTTGAGTAGATTTGGA+AGG | 0.557888 | 3.1:+78052744 | None:intergenic |
TGCACCTCTCGATCGTCTGA+AGG | 0.558903 | 3.1:-78053704 | MS.gene06293:CDS |
CTTGTGCCTCTGAAGGTGGA+AGG | 0.560242 | 3.1:-78053387 | MS.gene06293:CDS |
CCTAGTTGTACTAGAGGACC+GGG | 0.564027 | 3.1:+78053069 | None:intergenic |
CAGACTTGTGCCTCTGAAGG+TGG | 0.565219 | 3.1:-78053391 | MS.gene06293:CDS |
CTACAGACTTGTGCCTCTGA+AGG | 0.568315 | 3.1:-78053394 | MS.gene06293:CDS |
TGATGCTAATAGTGATGGTA+GGG | 0.568836 | 3.1:-78055254 | MS.gene06293:CDS |
TTAGCAGGTGGCGTGGCTGG+TGG | 0.570129 | 3.1:-78053463 | MS.gene06293:CDS |
TTGTGCCTCTGAAGGTGGAA+GGG | 0.574169 | 3.1:-78053386 | MS.gene06293:CDS |
CCCGGTCCTCTAGTACAACT+AGG | 0.575820 | 3.1:-78053069 | MS.gene06293:CDS |
CTAGTACGAATAACCTGCAG+TGG | 0.576215 | 3.1:+78053003 | None:intergenic |
TTCACTAGATCACGTGCTTG+AGG | 0.578433 | 3.1:-78055443 | MS.gene06293:CDS |
ATTCGGATATTGGTGCTGCT+GGG | 0.584583 | 3.1:-78053492 | MS.gene06293:CDS |
AAACATTCCCTTATAAGCAT+CGG | 0.584700 | 3.1:+78052823 | None:intergenic |
GAATCCATATATTCTTTGTG+AGG | 0.586586 | 3.1:+78053347 | None:intergenic |
AAGAATATATGGATTCAAGA+AGG | 0.587277 | 3.1:-78053340 | MS.gene06293:CDS |
GAATGTTGTGAAGGTAGCAC+CGG | 0.587546 | 3.1:-78053581 | MS.gene06293:CDS |
CTTTGTGGAGCACGTTGACA+AGG | 0.587754 | 3.1:-78053944 | MS.gene06293:CDS |
CAAATCAACACAATGGGTGG+TGG | 0.594305 | 3.1:-78055496 | None:intergenic |
TTTCAATAGTTGCTTCATGA+GGG | 0.596353 | 3.1:+78053869 | None:intergenic |
GATAGACACATGTAGCTCCA+AGG | 0.598066 | 3.1:+78053025 | None:intergenic |
CTCTAGTACAACTAGGATGT+GGG | 0.600264 | 3.1:-78053062 | MS.gene06293:CDS |
CGGATATTGGTGCTGCTGGG+AGG | 0.600630 | 3.1:-78053489 | MS.gene06293:CDS |
AAAGTAATTGGAGATGCTCA+AGG | 0.602778 | 3.1:-78053520 | MS.gene06293:CDS |
AGAGTGTACCATGTAGACAT+TGG | 0.605955 | 3.1:-78053826 | MS.gene06293:CDS |
AACCAAATCAACACAATGGG+TGG | 0.607177 | 3.1:-78055499 | None:intergenic |
TAATGGATTGAATGTTGTGA+AGG | 0.610631 | 3.1:-78053590 | MS.gene06293:CDS |
CAACATTCAATCCATTACCT+CGG | 0.611488 | 3.1:+78053596 | None:intergenic |
ATCTGCATTGCAAATTCCAG+CGG | 0.612606 | 3.1:-78055311 | MS.gene06293:CDS |
CCACATCCTAGTTGTACTAG+AGG | 0.616859 | 3.1:+78053063 | None:intergenic |
CATGGTACACTCTCTCCCAA+TGG | 0.626001 | 3.1:+78053836 | None:intergenic |
GGAATCATGCCAATCACAGA+CGG | 0.632261 | 3.1:+78053289 | None:intergenic |
ATAGACACATGTAGCTCCAA+GGG | 0.639088 | 3.1:+78053026 | None:intergenic |
TCACAGACGGAAGAAGTCCT+CGG | 0.639212 | 3.1:+78053302 | None:intergenic |
GTTTGTGATGCTAATAGTGA+TGG | 0.652225 | 3.1:-78055259 | MS.gene06293:CDS |
ACGATCGAGAGGTGCAGTCG+CGG | 0.656594 | 3.1:+78053711 | None:intergenic |
ATCACCTTCAGACGATCGAG+AGG | 0.659545 | 3.1:+78053700 | None:intergenic |
GGACCTCGAGCTTTCTACCG+AGG | 0.662290 | 3.1:-78053319 | MS.gene06293:CDS |
AAGATCCATAGGATAGATTG+CGG | 0.679419 | 3.1:+78053429 | None:intergenic |
AGTCCTCGGTAGAAAGCTCG+AGG | 0.680432 | 3.1:+78053316 | None:intergenic |
TGGAAGCAAGATAATATACG+GGG | 0.738439 | 3.1:-78053625 | MS.gene06293:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTTATACATAATAAATATA+GGG | + | chr3.1:78053509-78053528 | None:intergenic | 10.0% |
!! | ATTTATTATGTATAAGTATA+GGG | - | chr3.1:78053512-78053531 | MS.gene06293:CDS | 10.0% |
!! | TACTTATACATAATAAATAT+AGG | + | chr3.1:78053510-78053529 | None:intergenic | 10.0% |
!! | TATTTATTATGTATAAGTAT+AGG | - | chr3.1:78053511-78053530 | MS.gene06293:CDS | 10.0% |
!! | AAATATATTATTCATGATAG+TGG | - | chr3.1:78054949-78054968 | MS.gene06293:intron | 15.0% |
!! | ATCATGAATAATATATTTCT+TGG | + | chr3.1:78054947-78054966 | None:intergenic | 15.0% |
!! | CTTATACATAATAAATATAG+GGG | + | chr3.1:78053508-78053527 | None:intergenic | 15.0% |
!! | GTATTTATTCAAAAATAGAA+AGG | - | chr3.1:78053599-78053618 | MS.gene06293:CDS | 15.0% |
!! | TAGAAATAATTACTTTATGT+AGG | - | chr3.1:78053142-78053161 | MS.gene06293:intron | 15.0% |
!! | TTATACATAATAAATATAGG+GGG | + | chr3.1:78053507-78053526 | None:intergenic | 15.0% |
!! | TTTATTATGTATAAGTATAG+GGG | - | chr3.1:78053513-78053532 | MS.gene06293:CDS | 15.0% |
!!! | AGTATTTAATGATTTTTAAG+AGG | - | chr3.1:78053387-78053406 | MS.gene06293:CDS | 15.0% |
!!! | GTTTTGTATTTGTTATTTTA+GGG | - | chr3.1:78055253-78055272 | MS.gene06293:CDS | 15.0% |
!! | ACAATAAAACTTTCACAAAA+AGG | + | chr3.1:78054117-78054136 | None:intergenic | 20.0% |
!! | GAAATGTTGAAAAAAGTAAT+TGG | - | chr3.1:78054631-78054650 | MS.gene06293:intron | 20.0% |
!! | TAAAATCAAGCTTGTAATAT+TGG | - | chr3.1:78053809-78053828 | MS.gene06293:CDS | 20.0% |
!! | TGAAAATATATATCACCATT+GGG | - | chr3.1:78054312-78054331 | MS.gene06293:intron | 20.0% |
!! | TTGAAAATATATATCACCAT+TGG | - | chr3.1:78054311-78054330 | MS.gene06293:intron | 20.0% |
!!! | GGTTTTGTATTTGTTATTTT+AGG | - | chr3.1:78055252-78055271 | MS.gene06293:CDS | 20.0% |
!!! | TGGTTATTTCTTACTATTTT+TGG | - | chr3.1:78053108-78053127 | MS.gene06293:intron | 20.0% |
!!! | TTACATTTTAATCCTTTTTC+AGG | - | chr3.1:78055292-78055311 | MS.gene06293:CDS | 20.0% |
! | AACACAATATAGAATGGAAA+AGG | + | chr3.1:78054006-78054025 | None:intergenic | 25.0% |
! | AAGAATATATGGATTCAAGA+AGG | - | chr3.1:78054823-78054842 | MS.gene06293:intron | 25.0% |
! | AATCCATATATTCTTTGTGA+GGG | + | chr3.1:78054818-78054837 | None:intergenic | 25.0% |
! | ACCAAAAAAGATTAAACTAG+AGG | + | chr3.1:78053092-78053111 | None:intergenic | 25.0% |
! | ATATATGGATGATAAGGAAT+TGG | - | chr3.1:78052954-78052973 | MS.gene06293:intron | 25.0% |
! | ATGATTCTGATCATTTCATT+TGG | + | chr3.1:78055215-78055234 | None:intergenic | 25.0% |
! | ATTATGTTCAGATAGAGAAA+GGG | - | chr3.1:78052827-78052846 | MS.gene06293:CDS | 25.0% |
! | GTAACAAACACAATATAGAA+TGG | + | chr3.1:78054012-78054031 | None:intergenic | 25.0% |
! | TATGGAAGCAAGATAATATA+CGG | - | chr3.1:78054536-78054555 | MS.gene06293:intron | 25.0% |
! | TCTCAACAAATAACTATGAT+GGG | - | chr3.1:78053577-78053596 | MS.gene06293:CDS | 25.0% |
! | TGCTTATGATAAATACTATC+AGG | + | chr3.1:78054147-78054166 | None:intergenic | 25.0% |
! | TTCTCAACAAATAACTATGA+TGG | - | chr3.1:78053576-78053595 | MS.gene06293:CDS | 25.0% |
!! | AATGGAAAAGGTATAAACTT+GGG | + | chr3.1:78053994-78054013 | None:intergenic | 25.0% |
!! | AGTTTAGGATAAATGGAAAT+TGG | - | chr3.1:78053847-78053866 | MS.gene06293:CDS | 25.0% |
!! | CTTATGTAGTTTAGGATAAA+TGG | - | chr3.1:78053840-78053859 | MS.gene06293:CDS | 25.0% |
!! | CTTTTAGACTTATGTAGTTT+AGG | - | chr3.1:78053832-78053851 | MS.gene06293:CDS | 25.0% |
!! | TATATGCTTTGCCTTTTTAA+CGG | - | chr3.1:78053899-78053918 | MS.gene06293:CDS | 25.0% |
!! | TTGTTACATCTTTGTTTGTT+TGG | - | chr3.1:78054025-78054044 | MS.gene06293:intron | 25.0% |
!! | TTTTCAATTTCTTTGATGGA+GGG | - | chr3.1:78052788-78052807 | MS.gene06293:CDS | 25.0% |
!!! | GAAATAGTTTCACTTTTCAA+AGG | + | chr3.1:78055046-78055065 | None:intergenic | 25.0% |
!!! | TAACTTTTCTACTTTAAGAC+TGG | + | chr3.1:78053228-78053247 | None:intergenic | 25.0% |
!!! | TAATGATTTTTAAGAGGAGA+TGG | - | chr3.1:78053393-78053412 | MS.gene06293:CDS | 25.0% |
!!! | TATTATTCATGATAGTGGTA+TGG | - | chr3.1:78054954-78054973 | MS.gene06293:intron | 25.0% |
!!! | TGTAGGTTGAGTTTTTTATT+AGG | - | chr3.1:78053159-78053178 | MS.gene06293:intron | 25.0% |
AAACATTCCCTTATAAGCAT+CGG | + | chr3.1:78055343-78055362 | None:intergenic | 30.0% | |
AAACTAGAGGCAAAACAAAA+AGG | + | chr3.1:78053079-78053098 | None:intergenic | 30.0% | |
ACATAATAAATATAGGGGGA+GGG | + | chr3.1:78053503-78053522 | None:intergenic | 30.0% | |
AGGTATGTTTAAATAGCACA+TGG | + | chr3.1:78053625-78053644 | None:intergenic | 30.0% | |
AGGTGAATCAAAAGAAGAAA+GGG | - | chr3.1:78052747-78052766 | MS.gene06293:CDS | 30.0% | |
ATGGAAGCAAGATAATATAC+GGG | - | chr3.1:78054537-78054556 | MS.gene06293:intron | 30.0% | |
ATTGAAACATAATTGCAAGG+AGG | - | chr3.1:78053542-78053561 | MS.gene06293:CDS | 30.0% | |
CAATGAGTTTAGGAGATATA+TGG | - | chr3.1:78052939-78052958 | MS.gene06293:intron | 30.0% | |
CTATGGATCTTATCAAAACT+AGG | - | chr3.1:78054746-78054765 | MS.gene06293:intron | 30.0% | |
CTCCATCAAAGAAATTGAAA+AGG | + | chr3.1:78052789-78052808 | None:intergenic | 30.0% | |
CTGATCATTTCATTTGGATA+AGG | + | chr3.1:78055209-78055228 | None:intergenic | 30.0% | |
GAAAAGCCAAAGTTTGAATT+CGG | - | chr3.1:78053290-78053309 | MS.gene06293:CDS | 30.0% | |
GAATCCATATATTCTTTGTG+AGG | + | chr3.1:78054819-78054838 | None:intergenic | 30.0% | |
GATAAATGGAAATTGGATTG+TGG | - | chr3.1:78053854-78053873 | MS.gene06293:CDS | 30.0% | |
GATCTAGTGAAATGTTTCTT+GGG | + | chr3.1:78052711-78052730 | None:intergenic | 30.0% | |
GATTATGTTCAGATAGAGAA+AGG | - | chr3.1:78052826-78052845 | MS.gene06293:CDS | 30.0% | |
GTGGATTCTATTATTGTGAA+GGG | - | chr3.1:78053873-78053892 | MS.gene06293:CDS | 30.0% | |
GTTAAAATGTCCCGTTAAAA+AGG | + | chr3.1:78053913-78053932 | None:intergenic | 30.0% | |
GTTATTGTGGATATTGAAGA+TGG | - | chr3.1:78054087-78054106 | MS.gene06293:intron | 30.0% | |
TACATAATAAATATAGGGGG+AGG | + | chr3.1:78053504-78053523 | None:intergenic | 30.0% | |
TAGAATTTGATTGCACTTTC+CGG | + | chr3.1:78054604-78054623 | None:intergenic | 30.0% | |
TAGGAGATATATGGATGATA+AGG | - | chr3.1:78052948-78052967 | MS.gene06293:intron | 30.0% | |
TAGGTGAATCAAAAGAAGAA+AGG | - | chr3.1:78052746-78052765 | MS.gene06293:CDS | 30.0% | |
TCCTTGCAATTATGTTTCAA+TGG | + | chr3.1:78053543-78053562 | None:intergenic | 30.0% | |
TGATCTAGTGAAATGTTTCT+TGG | + | chr3.1:78052712-78052731 | None:intergenic | 30.0% | |
TGTCTTACACAGAATAGTAT+GGG | + | chr3.1:78053457-78053476 | None:intergenic | 30.0% | |
TGTGGATTCTATTATTGTGA+AGG | - | chr3.1:78053872-78053891 | MS.gene06293:CDS | 30.0% | |
TTGTCTTACACAGAATAGTA+TGG | + | chr3.1:78053458-78053477 | None:intergenic | 30.0% | |
TTTCAATAGTTGCTTCATGA+GGG | + | chr3.1:78054297-78054316 | None:intergenic | 30.0% | |
TTTCTTGGACATATCTTTCA+AGG | + | chr3.1:78054932-78054951 | None:intergenic | 30.0% | |
! | AGCCTTTTCAATTTCTTTGA+TGG | - | chr3.1:78052784-78052803 | MS.gene06293:CDS | 30.0% |
! | ATATGCTTTGCCTTTTTAAC+GGG | - | chr3.1:78053900-78053919 | MS.gene06293:CDS | 30.0% |
! | CTTTTCAATTTCTTTGATGG+AGG | - | chr3.1:78052787-78052806 | MS.gene06293:CDS | 30.0% |
! | GAATGGAAAAGGTATAAACT+TGG | + | chr3.1:78053995-78054014 | None:intergenic | 30.0% |
! | TTTTCAATAGTTGCTTCATG+AGG | + | chr3.1:78054298-78054317 | None:intergenic | 30.0% |
!! | GAACTATCACTTTTGAAGAA+TGG | - | chr3.1:78054251-78054270 | MS.gene06293:intron | 30.0% |
!! | TAATGGATTGAATGTTGTGA+AGG | - | chr3.1:78054573-78054592 | MS.gene06293:intron | 30.0% |
!! | TCATTTGTGTTTTTCAGAAC+TGG | - | chr3.1:78055231-78055250 | MS.gene06293:CDS | 30.0% |
!!! | CTAGTTTTGATAAGATCCAT+AGG | + | chr3.1:78054748-78054767 | None:intergenic | 30.0% |
!!! | GCCTCTAGTTTAATCTTTTT+TGG | - | chr3.1:78053088-78053107 | MS.gene06293:intron | 30.0% |
AAAGTAATTGGAGATGCTCA+AGG | - | chr3.1:78054643-78054662 | MS.gene06293:intron | 35.0% | |
AACAGTTCCGATGCTTATAA+GGG | - | chr3.1:78055333-78055352 | MS.gene06293:CDS | 35.0% | |
AAGATCCATAGGATAGATTG+CGG | + | chr3.1:78054737-78054756 | None:intergenic | 35.0% | |
AATATCCACAATAACTGCAG+TGG | + | chr3.1:78054082-78054101 | None:intergenic | 35.0% | |
AGATGCTCAAGGTAACAATT+CGG | - | chr3.1:78054654-78054673 | MS.gene06293:intron | 35.0% | |
AGGAATAGAAATGGATGAAG+AGG | - | chr3.1:78054186-78054205 | MS.gene06293:intron | 35.0% | |
ATTTAAGCACACCTCAAGAA+AGG | + | chr3.1:78053425-78053444 | None:intergenic | 35.0% | |
CAACATTCAATCCATTACCT+CGG | + | chr3.1:78054570-78054589 | None:intergenic | 35.0% | |
CAACTTTGAGTAGATTTGGA+AGG | + | chr3.1:78055422-78055441 | None:intergenic | 35.0% | |
CAAGGTAACAATTCGGATAT+TGG | - | chr3.1:78054661-78054680 | MS.gene06293:intron | 35.0% | |
CAGCGATAAAATATTTGCTC+CGG | + | chr3.1:78054405-78054424 | None:intergenic | 35.0% | |
CAGTTAGTCAACATTCTTCA+CGG | + | chr3.1:78053952-78053971 | None:intergenic | 35.0% | |
CATAATAAATATAGGGGGAG+GGG | + | chr3.1:78053502-78053521 | None:intergenic | 35.0% | |
GAACCCTCACAAAGAATATA+TGG | - | chr3.1:78054812-78054831 | MS.gene06293:intron | 35.0% | |
GAATTGAAGAGTGAAGACAT+CGG | + | chr3.1:78053727-78053746 | None:intergenic | 35.0% | |
GCCATTGAAACATAATTGCA+AGG | - | chr3.1:78053539-78053558 | MS.gene06293:CDS | 35.0% | |
GCTATTGATGTTGAACATAG+TGG | - | chr3.1:78052997-78053016 | MS.gene06293:intron | 35.0% | |
GTTTGTGATGCTAATAGTGA+TGG | - | chr3.1:78052904-78052923 | MS.gene06293:intron | 35.0% | |
TAAACATACCTTCTCACTAG+AGG | - | chr3.1:78053634-78053653 | MS.gene06293:CDS | 35.0% | |
TATTCTTCCTGAAGAGCTTT+GGG | - | chr3.1:78053023-78053042 | MS.gene06293:CDS | 35.0% | |
TCACGGATAAATGTTACAAC+TGG | + | chr3.1:78053935-78053954 | None:intergenic | 35.0% | |
TCTTTGATGGAGGGAATAAT+GGG | - | chr3.1:78052797-78052816 | MS.gene06293:CDS | 35.0% | |
TGATGCTAATAGTGATGGTA+GGG | - | chr3.1:78052909-78052928 | MS.gene06293:intron | 35.0% | |
TGGAAGCAAGATAATATACG+GGG | - | chr3.1:78054538-78054557 | MS.gene06293:intron | 35.0% | |
TTCTTTGATGGAGGGAATAA+TGG | - | chr3.1:78052796-78052815 | MS.gene06293:CDS | 35.0% | |
! | AGCAAATATTTTATCGCTGG+AGG | - | chr3.1:78054406-78054425 | MS.gene06293:intron | 35.0% |
! | ATATGCAAGAGAGCTTTTCA+TGG | - | chr3.1:78052882-78052901 | MS.gene06293:intron | 35.0% |
! | GAAAAGGTATAAACTTGGGA+AGG | + | chr3.1:78053990-78054009 | None:intergenic | 35.0% |
! | GGGTTGATTACAATGAGTTT+AGG | - | chr3.1:78052929-78052948 | MS.gene06293:intron | 35.0% |
! | TGTAGAACTTTTCAGCATGA+AGG | - | chr3.1:78055372-78055391 | MS.gene06293:CDS | 35.0% |
!!! | TTAATCCTTTTTCAGGCTTC+AGG | - | chr3.1:78055299-78055318 | MS.gene06293:CDS | 35.0% |
!!! | TTACCCAAGTGTTTTTTCCA+CGG | + | chr3.1:78053364-78053383 | None:intergenic | 35.0% |
AACCAGCCGAATTCAAACTT+TGG | + | chr3.1:78053299-78053318 | None:intergenic | 40.0% | |
AGAGTGTACCATGTAGACAT+TGG | - | chr3.1:78054337-78054356 | MS.gene06293:intron | 40.0% | |
AGCTGCGAGCATTACTTATA+TGG | - | chr3.1:78055446-78055465 | MS.gene06293:CDS | 40.0% | |
ATAGACACATGTAGCTCCAA+GGG | + | chr3.1:78055140-78055159 | None:intergenic | 40.0% | |
ATATAAGTAATGCTCGCAGC+TGG | + | chr3.1:78055447-78055466 | None:intergenic | 40.0% | |
ATCTGCATTGCAAATTCCAG+CGG | - | chr3.1:78052852-78052871 | MS.gene06293:CDS | 40.0% | |
ATTGGCATGATTCCTTATGC+TGG | - | chr3.1:78054883-78054902 | MS.gene06293:intron | 40.0% | |
CAATGCTGCAGGAATAGAAA+TGG | - | chr3.1:78054177-78054196 | MS.gene06293:intron | 40.0% | |
CACGTTGACAAGGACAATAA+TGG | - | chr3.1:78054229-78054248 | MS.gene06293:intron | 40.0% | |
CACTCTTCAATTCACTGATC+AGG | - | chr3.1:78053734-78053753 | MS.gene06293:CDS | 40.0% | |
CTCTAGTACAACTAGGATGT+GGG | - | chr3.1:78055101-78055120 | MS.gene06293:intron | 40.0% | |
CTTGCATATTTATACTCCGC+TGG | + | chr3.1:78052871-78052890 | None:intergenic | 40.0% | |
GAACAGTTCCGATGCTTATA+AGG | - | chr3.1:78055332-78055351 | MS.gene06293:CDS | 40.0% | |
GGCACAACTTTGAGTAGATT+TGG | + | chr3.1:78055426-78055445 | None:intergenic | 40.0% | |
GTATTCTTCCTGAAGAGCTT+TGG | - | chr3.1:78053022-78053041 | MS.gene06293:CDS | 40.0% | |
GTGATGCTAATAGTGATGGT+AGG | - | chr3.1:78052908-78052927 | MS.gene06293:intron | 40.0% | |
TTCGTGTCAGACACTAAATG+TGG | + | chr3.1:78053329-78053348 | None:intergenic | 40.0% | |
TTTAGTGTCTGACACGAACA+AGG | - | chr3.1:78053331-78053350 | MS.gene06293:CDS | 40.0% | |
TTTCTGCTGTGACGACAATA+TGG | - | chr3.1:78054518-78054537 | MS.gene06293:intron | 40.0% | |
TTTGTGAGGGTTCCAAGTTT+AGG | + | chr3.1:78054805-78054824 | None:intergenic | 40.0% | |
! | AATATACGGGGATTTTTCCG+AGG | - | chr3.1:78054550-78054569 | MS.gene06293:intron | 40.0% |
! | CGGAGCAAATATTTTATCGC+TGG | - | chr3.1:78054403-78054422 | MS.gene06293:intron | 40.0% |
! | TTTCAGCATGAAGGCTTTAG+AGG | - | chr3.1:78055381-78055400 | MS.gene06293:CDS | 40.0% |
!! | GGCTTTAGAGGTTTCTACAA+AGG | - | chr3.1:78055393-78055412 | MS.gene06293:CDS | 40.0% |
!!! | TACCCAAGTGTTTTTTCCAC+GGG | + | chr3.1:78053363-78053382 | None:intergenic | 40.0% |
AATAAATATAGGGGGAGGGG+AGG | + | chr3.1:78053499-78053518 | None:intergenic | 45.0% | |
ACATTAGCAAGCACGCTAAC+CGG | - | chr3.1:78054383-78054402 | MS.gene06293:intron | 45.0% | |
AGCCAAAGTTTGAATTCGGC+TGG | - | chr3.1:78053294-78053313 | MS.gene06293:CDS | 45.0% | |
ATAAATATAGGGGGAGGGGA+GGG | + | chr3.1:78053498-78053517 | None:intergenic | 45.0% | |
ATGAGCAGTTTCAATGCTGC+AGG | - | chr3.1:78054166-78054185 | MS.gene06293:intron | 45.0% | |
CACTGCAGGTTATTCGTACT+AGG | - | chr3.1:78055161-78055180 | MS.gene06293:CDS | 45.0% | |
CCACATCCTAGTTGTACTAG+AGG | + | chr3.1:78055103-78055122 | None:intergenic | 45.0% | |
CCTCTAGTACAACTAGGATG+TGG | - | chr3.1:78055100-78055119 | MS.gene06293:intron | 45.0% | |
CTAGGATGTGGGACAATTTC+TGG | - | chr3.1:78055112-78055131 | MS.gene06293:intron | 45.0% | |
CTAGTACGAATAACCTGCAG+TGG | + | chr3.1:78055163-78055182 | None:intergenic | 45.0% | |
CTCCCGTGGAAAAAACACTT+GGG | - | chr3.1:78053358-78053377 | MS.gene06293:CDS | 45.0% | |
CTTGGTCTCCAATGTCTACA+TGG | + | chr3.1:78054348-78054367 | None:intergenic | 45.0% | |
GAATGTTGTGAAGGTAGCAC+CGG | - | chr3.1:78054582-78054601 | MS.gene06293:intron | 45.0% | |
GATAGACACATGTAGCTCCA+AGG | + | chr3.1:78055141-78055160 | None:intergenic | 45.0% | |
GGAATCATGCCAATCACAGA+CGG | + | chr3.1:78054877-78054896 | None:intergenic | 45.0% | |
TACATGTGTCTATCCACTGC+AGG | - | chr3.1:78055147-78055166 | MS.gene06293:CDS | 45.0% | |
TCCTAGTTGTACTAGAGGAC+CGG | + | chr3.1:78055098-78055117 | None:intergenic | 45.0% | |
TCTGACCACTGCAGTTATTG+TGG | - | chr3.1:78054074-78054093 | MS.gene06293:intron | 45.0% | |
TGTCTTCAGGAATGACAGCT+TGG | + | chr3.1:78054366-78054385 | None:intergenic | 45.0% | |
TTCACTAGATCACGTGCTTG+AGG | - | chr3.1:78052720-78052739 | MS.gene06293:CDS | 45.0% | |
TTGTGCCTGAAGCCTGAAAA+AGG | + | chr3.1:78055307-78055326 | None:intergenic | 45.0% | |
TTTATCGCTGGAGGAATAGC+AGG | - | chr3.1:78054415-78054434 | MS.gene06293:intron | 45.0% | |
TTTCCCTCCTTCATAGATCC+CGG | - | chr3.1:78055076-78055095 | MS.gene06293:intron | 45.0% | |
! | AGTTTGAATTCGGCTGGTTG+AGG | - | chr3.1:78053300-78053319 | MS.gene06293:CDS | 45.0% |
!! | AATTCGGATATTGGTGCTGC+TGG | - | chr3.1:78054670-78054689 | MS.gene06293:intron | 45.0% |
!! | AGCTTTGGGATGCTCTTGAT+AGG | - | chr3.1:78053037-78053056 | MS.gene06293:CDS | 45.0% |
!! | ATTCGGATATTGGTGCTGCT+GGG | - | chr3.1:78054671-78054690 | MS.gene06293:intron | 45.0% |
!! | GATGGTTCTGACCTTTCTTG+AGG | - | chr3.1:78053411-78053430 | MS.gene06293:CDS | 45.0% |
!! | GCTTTGGGATGCTCTTGATA+GGG | - | chr3.1:78053038-78053057 | MS.gene06293:CDS | 45.0% |
!! | TAATAACTTTAAATTAAAAA+GGG | + | chr3.1:78053672-78053691 | None:intergenic | 5.0% |
!! | TTAATAACTTTAAATTAAAA+AGG | + | chr3.1:78053673-78053692 | None:intergenic | 5.0% |
ATCACCTTCAGACGATCGAG+AGG | + | chr3.1:78054466-78054485 | None:intergenic | 50.0% | |
CATGGTACACTCTCTCCCAA+TGG | + | chr3.1:78054330-78054349 | None:intergenic | 50.0% | |
CCTAGTTGTACTAGAGGACC+GGG | + | chr3.1:78055097-78055116 | None:intergenic | 50.0% | |
CCTCCCGTGGAAAAAACACT+TGG | - | chr3.1:78053357-78053376 | MS.gene06293:CDS | 50.0% | |
CGCATACACCTCTAGTGAGA+AGG | + | chr3.1:78053645-78053664 | None:intergenic | 50.0% | |
CTACAGACTTGTGCCTCTGA+AGG | - | chr3.1:78054769-78054788 | MS.gene06293:intron | 50.0% | |
CTTTGTGGAGCACGTTGACA+AGG | - | chr3.1:78054219-78054238 | MS.gene06293:intron | 50.0% | |
GCAGACCGCAATCTATCCTA+TGG | - | chr3.1:78054729-78054748 | MS.gene06293:intron | 50.0% | |
GCGAGATCAATGCCAGCATA+AGG | + | chr3.1:78054898-78054917 | None:intergenic | 50.0% | |
GGACTTCTTCCGTCTGTGAT+TGG | - | chr3.1:78054865-78054884 | MS.gene06293:intron | 50.0% | |
TAGAGGACCGGGATCTATGA+AGG | + | chr3.1:78055086-78055105 | None:intergenic | 50.0% | |
TCACAGACGGAAGAAGTCCT+CGG | + | chr3.1:78054864-78054883 | None:intergenic | 50.0% | |
! | AGAGCATCCCAAAGCTCTTC+AGG | + | chr3.1:78053033-78053052 | None:intergenic | 50.0% |
! | CGGGGATTTTTCCGAGGTAA+TGG | - | chr3.1:78054556-78054575 | MS.gene06293:intron | 50.0% |
! | GATCACGTGCTTGAGGCATT+AGG | - | chr3.1:78052727-78052746 | MS.gene06293:CDS | 50.0% |
! | GCGTGCTTGCTAATGTCTTC+AGG | + | chr3.1:78054379-78054398 | None:intergenic | 50.0% |
! | TTGTGCCTCTGAAGGTGGAA+GGG | - | chr3.1:78054777-78054796 | MS.gene06293:intron | 50.0% |
!! | GGGACAATTTCTGGAACCCT+TGG | - | chr3.1:78055121-78055140 | MS.gene06293:intron | 50.0% |
!!! | CCAAGTGTTTTTTCCACGGG+AGG | + | chr3.1:78053360-78053379 | None:intergenic | 50.0% |
ACGAACAAGGTTACCTCCCG+TGG | - | chr3.1:78053344-78053363 | MS.gene06293:CDS | 55.0% | |
AGGACCGGGATCTATGAAGG+AGG | + | chr3.1:78055083-78055102 | None:intergenic | 55.0% | |
AGTCCTCGGTAGAAAGCTCG+AGG | + | chr3.1:78054850-78054869 | None:intergenic | 55.0% | |
CCCGGTCCTCTAGTACAACT+AGG | - | chr3.1:78055094-78055113 | MS.gene06293:intron | 55.0% | |
GGACCGGGATCTATGAAGGA+GGG | + | chr3.1:78055082-78055101 | None:intergenic | 55.0% | |
GGTGGAAGGGCTCCTAAACT+TGG | - | chr3.1:78054790-78054809 | MS.gene06293:intron | 55.0% | |
TGCACCTCTCGATCGTCTGA+AGG | - | chr3.1:78054459-78054478 | MS.gene06293:intron | 55.0% | |
TGGGATGCTCTTGATAGGGC+TGG | - | chr3.1:78053042-78053061 | MS.gene06293:CDS | 55.0% | |
! | AGAGGAGCTTGCTCGCTTTG+TGG | - | chr3.1:78054204-78054223 | MS.gene06293:intron | 55.0% |
! | CAGACTTGTGCCTCTGAAGG+TGG | - | chr3.1:78054772-78054791 | MS.gene06293:intron | 55.0% |
! | CTTGTGCCTCTGAAGGTGGA+AGG | - | chr3.1:78054776-78054795 | MS.gene06293:intron | 55.0% |
AGGAGCCCTTCCACCTTCAG+AGG | + | chr3.1:78054785-78054804 | None:intergenic | 60.0% | |
GGACCTCGAGCTTTCTACCG+AGG | - | chr3.1:78054844-78054863 | MS.gene06293:intron | 60.0% | |
GGGAGGGGAGGGAAATTGAG+GGG | + | chr3.1:78053487-78053506 | None:intergenic | 60.0% | |
GGGGAGGGGAGGGAAATTGA+GGG | + | chr3.1:78053488-78053507 | None:intergenic | 60.0% | |
! | ACGATCGAGAGGTGCAGTCG+CGG | + | chr3.1:78054455-78054474 | None:intergenic | 60.0% |
! | CTTTTAGCAGGTGGCGTGGC+TGG | - | chr3.1:78054697-78054716 | MS.gene06293:intron | 60.0% |
! | GAGGCTTTTAGCAGGTGGCG+TGG | - | chr3.1:78054693-78054712 | MS.gene06293:intron | 60.0% |
! | GCTGCTGGGAGGCTTTTAGC+AGG | - | chr3.1:78054685-78054704 | MS.gene06293:intron | 60.0% |
! | GCTGGGAGGCTTTTAGCAGG+TGG | - | chr3.1:78054688-78054707 | MS.gene06293:intron | 60.0% |
!! | CGGATATTGGTGCTGCTGGG+AGG | - | chr3.1:78054674-78054693 | MS.gene06293:intron | 60.0% |
GGGGGAGGGGAGGGAAATTG+AGG | + | chr3.1:78053489-78053508 | None:intergenic | 65.0% | |
TTAGCAGGTGGCGTGGCTGG+TGG | - | chr3.1:78054700-78054719 | MS.gene06293:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 78052679 | 78055506 | 78052679 | ID=MS.gene06293 |
chr3.1 | mRNA | 78052679 | 78055506 | 78052679 | ID=MS.gene06293.t1;Parent=MS.gene06293 |
chr3.1 | exon | 78055122 | 78055506 | 78055122 | ID=MS.gene06293.t1.exon1;Parent=MS.gene06293.t1 |
chr3.1 | CDS | 78055122 | 78055506 | 78055122 | ID=cds.MS.gene06293.t1;Parent=MS.gene06293.t1 |
chr3.1 | exon | 78053215 | 78053997 | 78053215 | ID=MS.gene06293.t1.exon2;Parent=MS.gene06293.t1 |
chr3.1 | CDS | 78053215 | 78053997 | 78053215 | ID=cds.MS.gene06293.t1;Parent=MS.gene06293.t1 |
chr3.1 | exon | 78053003 | 78053093 | 78053003 | ID=MS.gene06293.t1.exon3;Parent=MS.gene06293.t1 |
chr3.1 | CDS | 78053003 | 78053093 | 78053003 | ID=cds.MS.gene06293.t1;Parent=MS.gene06293.t1 |
chr3.1 | exon | 78052679 | 78052871 | 78052679 | ID=MS.gene06293.t1.exon4;Parent=MS.gene06293.t1 |
chr3.1 | CDS | 78052679 | 78052871 | 78052679 | ID=cds.MS.gene06293.t1;Parent=MS.gene06293.t1 |
Gene Sequence |
Protein sequence |