AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063015

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063015.t1 MTR_4g073410 99.652 287 1 0 1 287 1 287 0.0 588
MS.gene063015.t1 MTR_5g022510 71.685 279 74 1 7 285 6 279 3.66e-152 426
MS.gene063015.t1 MTR_5g022510 71.545 246 65 1 40 285 14 254 3.08e-132 375
MS.gene063015.t1 MTR_4g061140 64.050 242 86 1 6 246 7 248 1.07e-110 320
MS.gene063015.t1 MTR_4g061140 63.750 240 86 1 6 244 7 246 3.97e-109 316
MS.gene063015.t1 MTR_4g061140 64.904 208 72 1 40 246 7 214 7.56e-94 276
MS.gene063015.t1 MTR_3g088160 49.237 262 106 6 14 248 100 361 9.55e-78 241
MS.gene063015.t1 MTR_3g088160 49.237 262 106 6 14 248 100 361 2.66e-77 241
MS.gene063015.t1 MTR_5g008440 53.614 166 62 2 80 244 30 181 8.94e-51 166
MS.gene063015.t1 MTR_3g107060 38.017 242 126 7 13 244 87 314 3.03e-43 150
MS.gene063015.t1 MTR_4g122640 29.358 218 107 7 75 249 111 324 5.18e-16 77.4
MS.gene063015.t1 MTR_7g029030 28.226 248 135 8 36 244 60 303 1.97e-15 75.5
MS.gene063015.t1 MTR_4g127670 28.102 274 142 10 32 258 55 320 1.07e-14 73.6
MS.gene063015.t1 MTR_1g077000 29.771 262 130 11 23 243 61 309 1.53e-14 73.2
MS.gene063015.t1 MTR_5g064610 34.911 169 76 5 24 158 109 277 1.57e-14 73.2
MS.gene063015.t1 MTR_4g095450 26.374 273 150 9 32 260 58 323 7.93e-14 70.9
MS.gene063015.t1 MTR_4g029180 27.344 256 126 9 35 243 61 303 2.39e-12 66.6
MS.gene063015.t1 MTR_7g086820 26.316 247 140 9 35 244 54 295 4.14e-12 65.9
MS.gene063015.t1 MTR_2g008160 30.952 168 97 6 9 164 30 190 5.00e-12 65.9
MS.gene063015.t1 MTR_5g074710 27.344 256 128 9 35 243 59 303 6.95e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063015.t1 AT4G35000 78.472 288 60 2 1 287 1 287 2.92e-160 447
MS.gene063015.t1 AT4G35970 66.431 283 89 2 5 287 3 279 1.65e-134 382
MS.gene063015.t1 AT4G35970 70.909 220 63 1 5 224 3 221 5.26e-113 325
MS.gene063015.t1 AT3G09640 62.083 240 91 0 7 246 9 248 5.92e-107 311
MS.gene063015.t1 AT3G09640 62.083 240 91 0 7 246 9 248 5.92e-107 311
MS.gene063015.t1 AT1G07890 60.331 242 95 1 6 246 7 248 5.28e-104 303
MS.gene063015.t1 AT1G07890 60.331 242 95 1 6 246 7 248 5.28e-104 303
MS.gene063015.t1 AT1G07890 60.331 242 95 1 6 246 7 248 5.28e-104 303
MS.gene063015.t1 AT1G07890 60.331 242 95 1 6 246 7 248 5.28e-104 303
MS.gene063015.t1 AT1G07890 60.331 242 95 1 6 246 7 248 5.28e-104 303
MS.gene063015.t1 AT1G07890 60.331 242 95 1 6 246 7 248 5.28e-104 303
MS.gene063015.t1 AT1G07890 60.331 242 95 1 6 246 7 248 5.28e-104 303
MS.gene063015.t1 AT1G07890 59.751 241 96 1 6 245 7 247 5.84e-103 301
MS.gene063015.t1 AT4G08390 48.047 256 108 4 14 244 106 361 2.62e-76 237
MS.gene063015.t1 AT4G08390 48.047 256 108 4 14 244 106 361 2.62e-76 237
MS.gene063015.t1 AT4G08390 48.047 256 108 4 14 244 106 361 2.62e-76 237
MS.gene063015.t1 AT4G08390 48.047 256 108 4 14 244 105 360 3.13e-76 237
MS.gene063015.t1 AT1G77490 48.828 256 106 4 14 244 85 340 1.70e-75 236
MS.gene063015.t1 AT1G77490 48.828 256 106 4 14 244 85 340 1.84e-75 236
MS.gene063015.t1 AT4G08390 44.141 256 92 5 14 244 106 335 2.18e-65 208
MS.gene063015.t1 AT4G32320 39.035 228 118 5 26 244 108 323 1.44e-41 146
MS.gene063015.t1 AT2G24800 32.308 195 90 4 90 244 120 312 7.38e-18 82.4
MS.gene063015.t1 AT4G31760 31.443 194 92 5 90 244 118 309 3.67e-17 80.5
MS.gene063015.t1 AT3G28200 30.890 191 90 4 90 244 115 299 2.15e-16 78.2
MS.gene063015.t1 AT4G30170 27.626 257 136 7 32 244 58 308 1.35e-15 76.3
MS.gene063015.t1 AT4G09010 35.185 162 67 5 33 158 49 208 1.42e-15 75.5
MS.gene063015.t1 AT4G09010 29.412 272 111 10 33 262 114 346 2.91e-15 75.5
MS.gene063015.t1 AT4G09010 29.412 272 111 10 33 262 161 393 5.38e-15 74.7
MS.gene063015.t1 AT5G17820 26.502 283 136 10 11 240 29 292 2.11e-14 72.4
MS.gene063015.t1 AT5G17820 26.280 293 144 10 1 240 72 345 6.96e-14 71.6
MS.gene063015.t1 AT5G14130 26.667 255 141 7 32 244 63 313 8.47e-14 70.9
MS.gene063015.t1 AT5G14130 26.667 255 141 7 32 244 104 354 1.38e-13 70.5
MS.gene063015.t1 AT4G33420 32.124 193 97 8 81 243 119 307 3.35e-13 69.3
MS.gene063015.t1 AT4G33420 32.124 193 97 8 81 243 166 354 3.92e-13 69.3
MS.gene063015.t1 AT4G37530 26.493 268 141 7 33 251 59 319 6.36e-13 68.6
MS.gene063015.t1 AT1G44970 26.562 256 135 9 35 243 79 328 6.92e-13 68.6
MS.gene063015.t1 AT1G14550 26.690 281 160 10 4 243 28 303 9.36e-13 67.8
MS.gene063015.t1 AT4G37520 26.119 268 142 7 33 251 59 319 1.46e-12 67.4
MS.gene063015.t1 AT2G18980 27.692 260 132 9 32 244 56 306 3.80e-12 66.2
MS.gene063015.t1 AT1G14540 25.442 283 160 10 4 243 23 297 1.14e-11 64.7
MS.gene063015.t1 AT4G37530 34.459 148 81 4 33 167 59 203 3.92e-11 62.8

Find 77 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGTTGCAGTTGAGGTTAC+TGG 0.120093 4.2:-35088074 MS.gene063015:CDS
TCCAACAGACAGGGCTTTAT+TGG 0.192934 4.2:-35087257 MS.gene063015:CDS
CCTTTGTGCTTCCAGCTTGC+GGG 0.246744 4.2:-35088098 MS.gene063015:intron
TCCGTTAACAATGGCGTTCC+CGG 0.280549 4.2:-35091093 None:intergenic
TCAACATAACGGCGAAATTC+AGG 0.286433 4.2:+35087229 None:intergenic
TGTCAATATCAGGATACTTT+TGG 0.287568 4.2:-35087308 MS.gene063015:intron
CCCACAGTCAACTTTGTTCC+TGG 0.312965 4.2:-35088047 MS.gene063015:CDS
GTACTGGCACAAAGCGCTTT+TGG 0.320365 4.2:-35086470 MS.gene063015:CDS
TTGTTGCAGTTGAGGTTACT+GGG 0.345113 4.2:-35088073 MS.gene063015:CDS
GGTAAATAATCACCTGATAA+AGG 0.356498 4.2:+35090553 None:intergenic
AGGTCTGCATATGAGATCTT+AGG 0.374897 4.2:+35090573 None:intergenic
GCACAACATACCCTTCTTCC+AGG 0.375359 4.2:+35088029 None:intergenic
AAAGATATTGTTGCACTGTC+TGG 0.377559 4.2:-35087657 MS.gene063015:CDS
CTCATATGCAGACCTTTATC+AGG 0.378885 4.2:-35090565 MS.gene063015:intron
CATAAGAAACTTTCAGAGCT+TGG 0.401756 4.2:-35086536 MS.gene063015:CDS
CCATCAAACCCGGATCTCTC+TGG 0.411433 4.2:+35087530 None:intergenic
ACCATTAGGTCCACCGGTCT+TGG 0.414832 4.2:+35090831 None:intergenic
CCAGAGAGATCCGGGTTTGA+TGG 0.422800 4.2:-35087530 MS.gene063015:CDS
TCGTTCCGAATAGAACCATT+AGG 0.431324 4.2:+35090817 None:intergenic
ATCAGGAAGCCGCCCATCTC+TGG 0.443990 4.2:+35087920 None:intergenic
TCAACTTTGTTCCTGGAAGA+AGG 0.444361 4.2:-35088040 MS.gene063015:CDS
AAGATATTGTTGCACTGTCT+GGG 0.448168 4.2:-35087656 MS.gene063015:CDS
GGAGCAGTTGCCTTTGAGCT+TGG 0.449217 4.2:+35086506 None:intergenic
TGATTCAGGTGGCACGATGC+TGG 0.451069 4.2:-35090871 MS.gene063015:intron
ACCAAGACCGGTGGACCTAA+TGG 0.457462 4.2:-35090832 MS.gene063015:CDS
TCCAATAAAGCCCTGTCTGT+TGG 0.463470 4.2:+35087256 None:intergenic
GATCCGGGTTTGATGGTCCT+TGG 0.463478 4.2:-35087523 MS.gene063015:CDS
GCCAGTACGGTTGCATCCAC+AGG 0.465545 4.2:+35086485 None:intergenic
TACTCTGAGTCTACTACTAC+CGG 0.469129 4.2:+35091074 None:intergenic
AACACACCTTGTTTAGCATC+AGG 0.470481 4.2:+35087903 None:intergenic
TGCTTAAACTTCCAACAGAC+AGG 0.474376 4.2:-35087267 MS.gene063015:CDS
AGAGCACATCCAGAGAGATC+CGG 0.490027 4.2:-35087539 MS.gene063015:CDS
GCCGCTGCAGTGGTGATCCT+CGG 0.490613 4.2:-35086437 MS.gene063015:CDS
TCAAAAGTATGTACCAGAGA+TGG 0.493165 4.2:-35087933 MS.gene063015:CDS
TCCTGTGGATGCAACCGTAC+TGG 0.493313 4.2:-35086486 MS.gene063015:CDS
GTGGACCTAATGGTTCTATT+CGG 0.494846 4.2:-35090822 MS.gene063015:CDS
CTCAAAGGCAACTGCTCCTG+TGG 0.511925 4.2:-35086501 MS.gene063015:CDS
GAGCACATCCAGAGAGATCC+GGG 0.520069 4.2:-35087538 MS.gene063015:CDS
TGCGGGTGTTGTTGCAGTTG+AGG 0.524490 4.2:-35088081 MS.gene063015:CDS
TTGTATGAAACTCACAAAAG+AGG 0.531958 4.2:-35086410 MS.gene063015:CDS
TTCTGTTGGCGATGAGAGCA+CGG 0.540281 4.2:+35091018 None:intergenic
CAACTTTGTTCCTGGAAGAA+GGG 0.545120 4.2:-35088039 MS.gene063015:intron
GTTTGATGGTCCTTGGACAG+AGG 0.549551 4.2:-35087516 MS.gene063015:CDS
CAAAAGTATGTACCAGAGAT+GGG 0.549843 4.2:-35087932 MS.gene063015:CDS
TGTATGAAACTCACAAAAGA+GGG 0.552331 4.2:-35086409 MS.gene063015:CDS
TTCAGAGGGTCCTCTGTCCA+AGG 0.554982 4.2:+35087506 None:intergenic
GAGGGGAGCACAGTTTCTGT+TGG 0.557155 4.2:+35091004 None:intergenic
TATGAGTTATCAAACTTCAG+AGG 0.559558 4.2:+35087491 None:intergenic
TGGCTTTGCACCAAGCTCAA+AGG 0.560692 4.2:-35086516 MS.gene063015:CDS
AAAAGCGCTTTGTGCCAGTA+CGG 0.571570 4.2:+35086472 None:intergenic
CGGCTTCCTGATGCTAAACA+AGG 0.575592 4.2:-35087909 MS.gene063015:intron
TATGATGCAAAGACCAAGAC+CGG 0.589691 4.2:-35090844 MS.gene063015:CDS
AATAGAACCATTAGGTCCAC+CGG 0.593542 4.2:+35090825 None:intergenic
TACGCTAAGCGAAGCATGAG+GGG 0.595394 4.2:+35090987 None:intergenic
ATGAGTTATCAAACTTCAGA+GGG 0.599283 4.2:+35087492 None:intergenic
TTATGTCACAGAGGAAGTGA+AGG 0.604368 4.2:-35090604 MS.gene063015:intron
ACTGTCTGGGGCACATACGC+TGG 0.608033 4.2:-35087643 MS.gene063015:intron
CCATACGATAAAAGATATCA+CGG 0.612766 4.2:+35087691 None:intergenic
TCGCATACAGCTCAACATAA+CGG 0.615688 4.2:+35087218 None:intergenic
AGTAGACTCAGAGTATCTCA+AGG 0.616880 4.2:-35091066 MS.gene063015:CDS
TGTCCAAGGACCATCAAACC+CGG 0.624885 4.2:+35087520 None:intergenic
CCAGGAACAAAGTTGACTGT+GGG 0.625811 4.2:+35088047 None:intergenic
TTACGCTAAGCGAAGCATGA+GGG 0.626450 4.2:+35090986 None:intergenic
ACCGAGGATCACCACTGCAG+CGG 0.626779 4.2:+35086436 None:intergenic
TCCAGGAACAAAGTTGACTG+TGG 0.628167 4.2:+35088046 None:intergenic
AGATATTGTTGCACTGTCTG+GGG 0.639389 4.2:-35087655 MS.gene063015:CDS
TTATGTTGAGCTGTATGCGA+AGG 0.641815 4.2:-35087215 MS.gene063015:intron
TGTTGCAGTTGAGGTTACTG+GGG 0.642422 4.2:-35088072 MS.gene063015:CDS
CTTACGCTAAGCGAAGCATG+AGG 0.649786 4.2:+35090985 None:intergenic
AGTTGTAGCTGCCGCTGCAG+TGG 0.652303 4.2:-35086447 MS.gene063015:CDS
GCTTAAACTTCCAACAGACA+GGG 0.655046 4.2:-35087266 MS.gene063015:CDS
GTTGCAGTTGAGGTTACTGG+GGG 0.656351 4.2:-35088071 MS.gene063015:CDS
ACTCTGAGTCTACTACTACC+GGG 0.677019 4.2:+35091075 None:intergenic
TAATGGTTCTATTCGGAACG+AGG 0.677025 4.2:-35090815 MS.gene063015:CDS
GAGTTTCATACAAGTAACCG+AGG 0.700364 4.2:+35086420 None:intergenic
GATGCAAAGACCAAGACCGG+TGG 0.716515 4.2:-35090841 MS.gene063015:CDS
AAGTATGTACCAGAGATGGG+CGG 0.726843 4.2:-35087929 MS.gene063015:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAAAAATAAAATAT+TGG + chr4.2:35090106-35090125 None:intergenic 0.0%
!! AAAAATAAAAATAAAATATT+GGG + chr4.2:35090105-35090124 None:intergenic 0.0%
!!! TTATTTTTTAATTTTTATTT+TGG - chr4.2:35090117-35090136 MS.gene063015:intron 0.0%
!! AATAATAAAAAGATATAGAA+AGG + chr4.2:35089876-35089895 None:intergenic 10.0%
!! AATTATTATAGTTAATAGTT+CGG + chr4.2:35087361-35087380 None:intergenic 10.0%
!! GAAAATAAAATAAGAATTTA+TGG + chr4.2:35089913-35089932 None:intergenic 10.0%
!! TATTAACTATAATAATTGAA+TGG - chr4.2:35087364-35087383 MS.gene063015:intron 10.0%
!!! AAAAGTAAATTTTGTATATT+TGG - chr4.2:35087878-35087897 MS.gene063015:intron 10.0%
!!! AAATTTAATCTTTAAAAATC+TGG - chr4.2:35087680-35087699 MS.gene063015:CDS 10.0%
!!! AAATTTAATTTTGAAAAATC+TGG + chr4.2:35087983-35088002 None:intergenic 10.0%
!!! AATATTTTTATGATTTTTTG+GGG + chr4.2:35087528-35087547 None:intergenic 10.0%
!!! AGATTTTTTTAAAAAAATTC+TGG + chr4.2:35088010-35088029 None:intergenic 10.0%
!!! AGATTTTTTTTAAATAATTC+TGG - chr4.2:35087653-35087672 MS.gene063015:CDS 10.0%
!!! AGATTTTTTTTTAAAAATTC+TGG - chr4.2:35087725-35087744 MS.gene063015:intron 10.0%
!!! GAATATTTTTATGATTTTTT+GGG + chr4.2:35088163-35088144 None:intergenic 10.0%
!!! GAATATTTTTATGATTTTTT+TGG - chr4.2:35088144-35088163 MS.gene063015:intron 10.0%
!!! TGAATATTTTTATGATTTTT+TGG + chr4.2:35088162-35088143 None:intergenic 10.0%
!!! TTTCGATTTTTTAAATTTTT+TGG - chr4.2:35088112-35088131 MS.gene063015:intron 10.0%
!! TACTATATATGAAAATCAAA+CGG + chr4.2:35089086-35089105 None:intergenic 15.0%
!! TGAATATCATATAATATCAT+TGG - chr4.2:35086831-35086850 MS.gene063015:intron 15.0%
!! TTTCAAAATACAAAAAAATC+TGG - chr4.2:35087818-35087837 MS.gene063015:intron 15.0%
!!! AGATTCATTTAATTTAATGA+TGG + chr4.2:35090841-35090860 None:intergenic 15.0%
!!! CAGATTTTTTTTTTAAATTC+TGG + chr4.2:35088064-35088083 None:intergenic 15.0%
!!! TATATCCAGATTTTAAAAAA+AGG - chr4.2:35087628-35087647 MS.gene063015:intron 15.0%
!!! TGGATACAAATTTTAAAAAA+AGG - chr4.2:35087700-35087719 MS.gene063015:CDS 15.0%
!!! TGGATACAAATTTTAAAAAA+AGG + chr4.2:35087719-35087700 None:intergenic 15.0%
!!! TGGATACAAATTTTAAAAAT+AGG - chr4.2:35087772-35087791 MS.gene063015:intron 15.0%
!!! TGTTATTTTAGTATTCAATT+AGG + chr4.2:35088339-35088358 None:intergenic 15.0%
!!! TTTGTATTCAGATTTTTAAA+AGG + chr4.2:35087916-35087935 None:intergenic 15.0%
!! ACATATAAAGTGATTAAATC+CGG - chr4.2:35089218-35089237 MS.gene063015:intron 20.0%
!! ATAACTAATATTGTAACGAA+AGG + chr4.2:35089487-35089506 None:intergenic 20.0%
!! ATATTGACAAAGATATTTAG+CGG + chr4.2:35090167-35090186 None:intergenic 20.0%
!! ATTATATTATGCCTTGAATT+AGG - chr4.2:35088604-35088623 MS.gene063015:intron 20.0%
!! TAAATATCTTTGTCAATATC+AGG - chr4.2:35090168-35090187 MS.gene063015:intron 20.0%
!! TTTCATAACTATCGAAATTT+AGG + chr4.2:35088951-35088970 None:intergenic 20.0%
!!! ATTTTATTTTCTGTGTTTCA+AGG - chr4.2:35089922-35089941 MS.gene063015:intron 20.0%
!!! TTTTATTTTCTGTGTTTCAA+GGG - chr4.2:35089923-35089942 MS.gene063015:intron 20.0%
!!! TTTTTAGCAAAACAGAAAAT+TGG + chr4.2:35090762-35090781 None:intergenic 20.0%
! AAACAAGAAAACTCTTAGAA+AGG + chr4.2:35086860-35086879 None:intergenic 25.0%
! AATTATTTATCACTCATGCA+GGG - chr4.2:35089270-35089289 MS.gene063015:intron 25.0%
! ACCTTAATAGTTGTAACATA+AGG + chr4.2:35090662-35090681 None:intergenic 25.0%
! AGACACTTACAAAGTAATTA+AGG + chr4.2:35089160-35089179 None:intergenic 25.0%
! ATATTAAGTAAGAAAGCTGT+TGG + chr4.2:35090582-35090601 None:intergenic 25.0%
! ATGGACTTATAAAATGCTAT+TGG + chr4.2:35090382-35090401 None:intergenic 25.0%
! GAAATAAAGAGTTCAGAAAA+TGG + chr4.2:35088698-35088717 None:intergenic 25.0%
! GACACTTACAAAGTAATTAA+GGG + chr4.2:35089159-35089178 None:intergenic 25.0%
! TAATCGAAGAAAATCAATAG+TGG - chr4.2:35090783-35090802 MS.gene063015:CDS 25.0%
! TAGAAGACAATTTCTTAAAG+AGG + chr4.2:35088470-35088489 None:intergenic 25.0%
! TATAAACATGTCAATGCTAT+TGG - chr4.2:35089756-35089775 MS.gene063015:intron 25.0%
! TCCTTATGTTACAACTATTA+AGG - chr4.2:35090658-35090677 MS.gene063015:intron 25.0%
! TGAAACTGAATCTCATTATT+AGG - chr4.2:35087235-35087254 MS.gene063015:CDS 25.0%
! TGAAATAGAACTACATTTCT+TGG - chr4.2:35088889-35088908 MS.gene063015:intron 25.0%
! TGTTCTATTCAATCATTTAC+AGG - chr4.2:35088512-35088531 MS.gene063015:intron 25.0%
! TTACAACAACAAAAAAGTGA+AGG + chr4.2:35086803-35086822 None:intergenic 25.0%
!! AAAATTGGCATGAATGTTTT+GGG + chr4.2:35090747-35090766 None:intergenic 25.0%
!! AAAATTTGTTTAAGGGAACA+AGG + chr4.2:35088789-35088808 None:intergenic 25.0%
!! CTTAATTTTGTTGATGTGTA+GGG + chr4.2:35089703-35089722 None:intergenic 25.0%
!! TATTGGATCAATCTTTTGAT+TGG - chr4.2:35090424-35090443 MS.gene063015:intron 25.0%
!! TCTTAATTTTGTTGATGTGT+AGG + chr4.2:35089704-35089723 None:intergenic 25.0%
!! TGTTTCTAAATTATTGTCAG+TGG - chr4.2:35089602-35089621 MS.gene063015:intron 25.0%
!! TTGTTCCCTTAAACAAATTT+TGG - chr4.2:35088788-35088807 MS.gene063015:intron 25.0%
!!! AAGAAAGCTATTGATTTTTG+CGG - chr4.2:35086726-35086745 MS.gene063015:intron 25.0%
!!! AATTTTTTTGCTTTACTACG+AGG - chr4.2:35090053-35090072 MS.gene063015:intron 25.0%
!!! TCTGACCTTTTTTTAAAATC+TGG + chr4.2:35087636-35087655 None:intergenic 25.0%
!!! TGCATATCTTGTTTTATACA+AGG + chr4.2:35089300-35089319 None:intergenic 25.0%
AACTGAATCTCATTATTAGG+TGG - chr4.2:35087238-35087257 MS.gene063015:CDS 30.0%
AATTAGAGAATGACAAGTTC+AGG + chr4.2:35089515-35089534 None:intergenic 30.0%
ACAAACAATGTAGCAGAAAT+AGG + chr4.2:35087121-35087140 None:intergenic 30.0%
ACATATTGAAATAGAGAGGA+AGG - chr4.2:35089242-35089261 MS.gene063015:intron 30.0%
AGAAAAGAAAATCCTTTCAC+AGG + chr4.2:35089673-35089692 None:intergenic 30.0%
ATGAGTTATCAAACTTCAGA+GGG + chr4.2:35089997-35090016 None:intergenic 30.0%
ATTTCCTACATGTGCTAATT+GGG - chr4.2:35090548-35090567 MS.gene063015:intron 30.0%
CCATACGATAAAAGATATCA+CGG + chr4.2:35089798-35089817 None:intergenic 30.0%
CGTACAATTGGCAAAATATA+GGG - chr4.2:35088235-35088254 MS.gene063015:intron 30.0%
CTCTCTATTTCAATATGTAC+CGG + chr4.2:35089240-35089259 None:intergenic 30.0%
CTCTTGTTGCATTTGTTTAT+TGG - chr4.2:35090407-35090426 MS.gene063015:intron 30.0%
CTTCTACCCAAAGAAAAAAA+GGG - chr4.2:35088484-35088503 MS.gene063015:intron 30.0%
GAATTATTTATCACTCATGC+AGG - chr4.2:35089269-35089288 MS.gene063015:intron 30.0%
GCACTTGAACACAAAATTAT+TGG + chr4.2:35086992-35087011 None:intergenic 30.0%
GGTAAATAATCACCTGATAA+AGG + chr4.2:35086936-35086955 None:intergenic 30.0%
TATGAGTTATCAAACTTCAG+AGG + chr4.2:35089998-35090017 None:intergenic 30.0%
TATGCCTTGAATTAGGATAA+GGG - chr4.2:35088611-35088630 MS.gene063015:intron 30.0%
TATTCAATCATTTACAGGCT+TGG - chr4.2:35088517-35088536 MS.gene063015:intron 30.0%
TCGTACAATTGGCAAAATAT+AGG - chr4.2:35088234-35088253 MS.gene063015:intron 30.0%
TCTGTGATAAACCATTTGAA+GGG - chr4.2:35088640-35088659 MS.gene063015:intron 30.0%
TCTTACGTTCGTTAATTTCA+CGG - chr4.2:35086568-35086587 MS.gene063015:CDS 30.0%
TCTTCTACCCAAAGAAAAAA+AGG - chr4.2:35088483-35088502 MS.gene063015:intron 30.0%
TGTATGAAACTCACAAAAGA+GGG - chr4.2:35091077-35091096 MS.gene063015:CDS 30.0%
TTACATGTATCCAAACTTAG+TGG - chr4.2:35089033-35089052 MS.gene063015:intron 30.0%
TTATGCCTTGAATTAGGATA+AGG - chr4.2:35088610-35088629 MS.gene063015:intron 30.0%
TTCTGTGATAAACCATTTGA+AGG - chr4.2:35088639-35088658 MS.gene063015:intron 30.0%
TTGTATGAAACTCACAAAAG+AGG - chr4.2:35091076-35091095 MS.gene063015:CDS 30.0%
TTTACATAACAAGTGAGTGA+AGG + chr4.2:35086957-35086976 None:intergenic 30.0%
TTTGCTAGAAGTTGTAGAAT+GGG - chr4.2:35087013-35087032 MS.gene063015:intron 30.0%
! ACACAAAGTATTACAGCATT+AGG + chr4.2:35088551-35088570 None:intergenic 30.0%
! ACGTTGCCAAAATTTGTTTA+AGG + chr4.2:35088797-35088816 None:intergenic 30.0%
! ATAAAGTGTTCTGCCAAATA+TGG - chr4.2:35090352-35090371 MS.gene063015:intron 30.0%
! CGATTTTGTTAATCTGATTC+AGG - chr4.2:35086601-35086620 MS.gene063015:intron 30.0%
! CGTGATATCTTTTATCGTAT+GGG - chr4.2:35089796-35089815 MS.gene063015:intron 30.0%
! CGTTGCCAAAATTTGTTTAA+GGG + chr4.2:35088796-35088815 None:intergenic 30.0%
! GAAAATTGGCATGAATGTTT+TGG + chr4.2:35090748-35090767 None:intergenic 30.0%
! TAAAGTGTTCTGCCAAATAT+GGG - chr4.2:35090353-35090372 MS.gene063015:intron 30.0%
! TATGAAATCAGTTTTCAGCA+GGG + chr4.2:35090335-35090354 None:intergenic 30.0%
! TCTAATTTTCTGTGTCATGT+AGG - chr4.2:35089528-35089547 MS.gene063015:intron 30.0%
! TGTCAATATCAGGATACTTT+TGG - chr4.2:35090178-35090197 MS.gene063015:intron 30.0%
! TTATGAAATCAGTTTTCAGC+AGG + chr4.2:35090336-35090355 None:intergenic 30.0%
! TTTTGCTAGAAGTTGTAGAA+TGG - chr4.2:35087012-35087031 MS.gene063015:intron 30.0%
! TTTTGTTAATCTGATTCAGG+TGG - chr4.2:35086604-35086623 MS.gene063015:intron 30.0%
!! CATTAAGTAGGTTGATTAGT+AGG - chr4.2:35090456-35090475 MS.gene063015:intron 30.0%
!! TTTATTATTTGCTGTGATCG+CGG - chr4.2:35089887-35089906 MS.gene063015:intron 30.0%
!! TTTTCTCATGGTGCTAATAA+TGG - chr4.2:35086699-35086718 MS.gene063015:intron 30.0%
!!! AACCATCCCTTTTTTTCTTT+GGG + chr4.2:35088493-35088512 None:intergenic 30.0%
AAAGATATTGTTGCACTGTC+TGG - chr4.2:35089829-35089848 MS.gene063015:intron 35.0%
AACATGTCAATGCTATTGGT+AGG - chr4.2:35089760-35089779 MS.gene063015:intron 35.0%
AAGATATTGTTGCACTGTCT+GGG - chr4.2:35089830-35089849 MS.gene063015:intron 35.0%
AATCAGAAAGGGGAAAACTA+TGG - chr4.2:35088173-35088192 MS.gene063015:intron 35.0%
AATCCCCTTATCCTAATTCA+AGG + chr4.2:35088618-35088637 None:intergenic 35.0%
AGACCAACGTATTAAGTAGT+TGG + chr4.2:35090633-35090652 None:intergenic 35.0%
ATACTTTGTGTGAGGTTTCA+AGG - chr4.2:35088560-35088579 MS.gene063015:intron 35.0%
ATCAGAAAGGGGAAAACTAT+GGG - chr4.2:35088174-35088193 MS.gene063015:intron 35.0%
ATCAGAATCAAGACAGTGAT+CGG - chr4.2:35089180-35089199 MS.gene063015:intron 35.0%
ATGCCTTGAATTAGGATAAG+GGG - chr4.2:35088612-35088631 MS.gene063015:intron 35.0%
ATGCTGTAATACTTTGTGTG+AGG - chr4.2:35088552-35088571 MS.gene063015:intron 35.0%
CACAATTGGCAAAATATAGG+GGG - chr4.2:35088297-35088316 MS.gene063015:intron 35.0%
CATAAGAAACTTTCAGAGCT+TGG - chr4.2:35090950-35090969 MS.gene063015:intron 35.0%
CGCACAATTGGCAAAATATA+GGG - chr4.2:35088295-35088314 MS.gene063015:intron 35.0%
CGCACAATTGGCAAAATATA+GGG + chr4.2:35088314-35088295 None:intergenic 35.0%
CGGTACATATTGAAATAGAG+AGG - chr4.2:35089238-35089257 MS.gene063015:intron 35.0%
CTGTGATAAACCATTTGAAG+GGG - chr4.2:35088641-35088660 MS.gene063015:intron 35.0%
GAGATATTAGCCACTAAGTT+TGG + chr4.2:35089046-35089065 None:intergenic 35.0%
GATTTCCTACATGTGCTAAT+TGG - chr4.2:35090547-35090566 MS.gene063015:intron 35.0%
GCACAATTGGCAAAATATAG+GGG - chr4.2:35088296-35088315 MS.gene063015:intron 35.0%
TACAACAGTTTCGTTCACTT+GGG - chr4.2:35089625-35089644 MS.gene063015:intron 35.0%
TACCCAAAGAAAAAAAGGGA+TGG - chr4.2:35088488-35088507 MS.gene063015:intron 35.0%
TATTGAAATAGAGAGGAAGG+AGG - chr4.2:35089245-35089264 MS.gene063015:intron 35.0%
TCGCACAATTGGCAAAATAT+AGG - chr4.2:35088294-35088313 MS.gene063015:intron 35.0%
TCGCACAATTGGCAAAATAT+AGG + chr4.2:35088313-35088294 None:intergenic 35.0%
TCTAATTCTAATTCTCCCTC+TGG - chr4.2:35090888-35090907 MS.gene063015:intron 35.0%
TGCTATTGGAAACCCATATT+TGG + chr4.2:35090368-35090387 None:intergenic 35.0%
TGGAACTCATTGCATTAAGT+AGG - chr4.2:35090444-35090463 MS.gene063015:intron 35.0%
TGTGATAAACCATTTGAAGG+GGG - chr4.2:35088642-35088661 MS.gene063015:intron 35.0%
TTGCTAGAAGTTGTAGAATG+GGG - chr4.2:35087014-35087033 MS.gene063015:intron 35.0%
TTTGGGTGCAAAATCAGAAA+GGG - chr4.2:35088162-35088181 MS.gene063015:intron 35.0%
! AAATCGCTCGTTTGAAACAA+TGG - chr4.2:35088202-35088221 MS.gene063015:intron 35.0%
! AAATCGCTCGTTTGAAACAA+TGG + chr4.2:35088221-35088202 None:intergenic 35.0%
! AATCGCTCGTTTGAAACAAT+GGG - chr4.2:35088203-35088222 MS.gene063015:intron 35.0%
! AATCGCTCGTTTGAAACAAT+GGG + chr4.2:35088222-35088203 None:intergenic 35.0%
! ATCACGTTTTTGCCTAAGAA+AGG + chr4.2:35088870-35088889 None:intergenic 35.0%
! CAAAAGTATGTACCAGAGAT+GGG - chr4.2:35089554-35089573 MS.gene063015:intron 35.0%
! CAGTGTCATTGAAATGATTG+AGG + chr4.2:35088824-35088843 None:intergenic 35.0%
! CCGTGATATCTTTTATCGTA+TGG - chr4.2:35089795-35089814 MS.gene063015:intron 35.0%
! GGTTTTTGACAAAGTTGTCA+AGG - chr4.2:35088581-35088600 MS.gene063015:intron 35.0%
! TCAAAAGTATGTACCAGAGA+TGG - chr4.2:35089553-35089572 MS.gene063015:intron 35.0%
!! CTTGGTAGCTTTATGAAATC+TGG - chr4.2:35088907-35088926 MS.gene063015:intron 35.0%
!! CTTGTTTTCTTATGTCACAG+AGG - chr4.2:35086873-35086892 MS.gene063015:intron 35.0%
!! TTTTGGGTGCAAAATCAGAA+AGG - chr4.2:35088161-35088180 MS.gene063015:intron 35.0%
!!! ATTAGTTTTCCCCCTTCAAA+TGG + chr4.2:35088654-35088673 None:intergenic 35.0%
!!! CAACCATCCCTTTTTTTCTT+TGG + chr4.2:35088494-35088513 None:intergenic 35.0%
!!! TGTTTTTTTTCCCTTGTGCT+TGG - chr4.2:35088441-35088460 MS.gene063015:intron 35.0%
AAAGAGGTAACCAAGCACAA+GGG + chr4.2:35088454-35088473 None:intergenic 40.0%
AACATCGTGATAATCGCAGA+TGG + chr4.2:35090521-35090540 None:intergenic 40.0%
AACGTATTAAGTAGTTGGCC+AGG + chr4.2:35090628-35090647 None:intergenic 40.0%
AATAGAACCATTAGGTCCAC+CGG + chr4.2:35086664-35086683 None:intergenic 40.0%
ACTACCAACAAGCCTTTCTT+AGG - chr4.2:35088855-35088874 MS.gene063015:intron 40.0%
ACTCTGGACACTCAAAACTT+TGG - chr4.2:35087142-35087161 MS.gene063015:intron 40.0%
AGATATGAGCTCTTTCTACC+TGG - chr4.2:35090607-35090626 MS.gene063015:intron 40.0%
AGATATTGTTGCACTGTCTG+GGG - chr4.2:35089831-35089850 MS.gene063015:intron 40.0%
AGCTGTATGCGAAGGTAATT+GGG - chr4.2:35090279-35090298 MS.gene063015:intron 40.0%
AGGTCTGCATATGAGATCTT+AGG + chr4.2:35086916-35086935 None:intergenic 40.0%
ATCAGAATGGGGGAAAACTA+TGG + chr4.2:35087499-35087518 None:intergenic 40.0%
CAACTTTGTTCCTGGAAGAA+GGG - chr4.2:35089447-35089466 MS.gene063015:intron 40.0%
CATTTCCTTCCTTCCGATTT+CGG - chr4.2:35086543-35086562 MS.gene063015:CDS 40.0%
CGAACGTAAGAAACCGAAAT+CGG + chr4.2:35086559-35086578 None:intergenic 40.0%
CTCATATGCAGACCTTTATC+AGG - chr4.2:35086921-35086940 MS.gene063015:intron 40.0%
CTCTGGACACTCAAAACTTT+GGG - chr4.2:35087143-35087162 MS.gene063015:intron 40.0%
GAAAGAGCTTGTGTGTAAGA+GGG + chr4.2:35087317-35087336 None:intergenic 40.0%
GAGTTTCATACAAGTAACCG+AGG + chr4.2:35091069-35091088 None:intergenic 40.0%
GCTTAAACTTCCAACAGACA+GGG - chr4.2:35090220-35090239 MS.gene063015:intron 40.0%
GTACAACAGTTTCGTTCACT+TGG - chr4.2:35089624-35089643 MS.gene063015:intron 40.0%
GTCATTGAAATGATTGAGGC+AGG + chr4.2:35088820-35088839 None:intergenic 40.0%
TAAAGAGGTAACCAAGCACA+AGG + chr4.2:35088455-35088474 None:intergenic 40.0%
TACTCTGAGTCTACTACTAC+CGG + chr4.2:35086415-35086434 None:intergenic 40.0%
TATGATGCAAAGACCAAGAC+CGG - chr4.2:35086642-35086661 MS.gene063015:intron 40.0%
TCAACATAACGGCGAAATTC+AGG + chr4.2:35090260-35090279 None:intergenic 40.0%
TCAACTTTGTTCCTGGAAGA+AGG - chr4.2:35089446-35089465 MS.gene063015:intron 40.0%
TCAGAAAGGGGAAAACTATG+GGG - chr4.2:35088175-35088194 MS.gene063015:intron 40.0%
TCAGAATGGGGGAAAACTAT+GGG + chr4.2:35087498-35087517 None:intergenic 40.0%
TCCAAAGCACAATGCTTACT+GGG + chr4.2:35090487-35090506 None:intergenic 40.0%
TCGCATACAGCTCAACATAA+CGG + chr4.2:35090271-35090290 None:intergenic 40.0%
TCGGAATTGTCATGCATCAT+GGG + chr4.2:35087342-35087361 None:intergenic 40.0%
TCGTTCCGAATAGAACCATT+AGG + chr4.2:35086672-35086691 None:intergenic 40.0%
TGCTACATTGTTTGTGACTC+TGG - chr4.2:35087126-35087145 MS.gene063015:intron 40.0%
TGCTTAAACTTCCAACAGAC+AGG - chr4.2:35090219-35090238 MS.gene063015:intron 40.0%
TGGCCAACTACTTAATACGT+TGG - chr4.2:35090627-35090646 MS.gene063015:intron 40.0%
TTATGTCACAGAGGAAGTGA+AGG - chr4.2:35086882-35086901 MS.gene063015:intron 40.0%
TTATGTTGAGCTGTATGCGA+AGG - chr4.2:35090271-35090290 MS.gene063015:intron 40.0%
TTCGGAATTGTCATGCATCA+TGG + chr4.2:35087343-35087362 None:intergenic 40.0%
TTGGGGTGCAAAATCAGAAT+GGG + chr4.2:35087511-35087530 None:intergenic 40.0%
TTGGGTGCAAAATCAGAAAG+GGG - chr4.2:35088163-35088182 MS.gene063015:intron 40.0%
TTGTTGCAGTTGAGGTTACT+GGG - chr4.2:35089413-35089432 MS.gene063015:intron 40.0%
TTTGCCTAAGAAAGGCTTGT+TGG + chr4.2:35088862-35088881 None:intergenic 40.0%
! AACACACCTTGTTTAGCATC+AGG + chr4.2:35089586-35089605 None:intergenic 40.0%
! AACGAGGAAGAGTTTTCTCA+TGG - chr4.2:35086687-35086706 MS.gene063015:intron 40.0%
! AGGGCACTAATCTAAGCAAA+GGG + chr4.2:35087298-35087317 None:intergenic 40.0%
! AGTAGACTCAGAGTATCTCA+AGG - chr4.2:35086420-35086439 MS.gene063015:CDS 40.0%
! ATCGCTCGTTTGAAACAATG+GGG - chr4.2:35088204-35088223 MS.gene063015:intron 40.0%
! ATCGCTCGTTTGAAACAATG+GGG + chr4.2:35088223-35088204 None:intergenic 40.0%
! GTGGACCTAATGGTTCTATT+CGG - chr4.2:35086664-35086683 MS.gene063015:intron 40.0%
! TAATGGTTCTATTCGGAACG+AGG - chr4.2:35086671-35086690 MS.gene063015:intron 40.0%
! TTTGGGGTGCAAAATCAGAA+TGG + chr4.2:35087512-35087531 None:intergenic 40.0%
!! TTGGCATGAATGTTTTGGGT+AGG + chr4.2:35090743-35090762 None:intergenic 40.0%
AAGCACAATGCTTACTGGGA+AGG + chr4.2:35090483-35090502 None:intergenic 45.0%
AAGTATGTACCAGAGATGGG+CGG - chr4.2:35089557-35089576 MS.gene063015:intron 45.0%
ACTCTGAGTCTACTACTACC+GGG + chr4.2:35086414-35086433 None:intergenic 45.0%
AGAAACCGAAATCGGAAGGA+AGG + chr4.2:35086551-35086570 None:intergenic 45.0%
ATTCTAATTCTCCCTCTGGC+AGG - chr4.2:35090892-35090911 MS.gene063015:intron 45.0%
CAGAATGGGGGAAAACTATG+GGG + chr4.2:35087497-35087516 None:intergenic 45.0%
CATGTAATCTATGACGCAGC+TGG + chr4.2:35089343-35089362 None:intergenic 45.0%
CCAGGAACAAAGTTGACTGT+GGG + chr4.2:35089442-35089461 None:intergenic 45.0%
CGTAAGAAACCGAAATCGGA+AGG + chr4.2:35086555-35086574 None:intergenic 45.0%
CTCCAAAGCACAATGCTTAC+TGG + chr4.2:35090488-35090507 None:intergenic 45.0%
GAAAATCCTTTCACAGGCAG+TGG + chr4.2:35089667-35089686 None:intergenic 45.0%
GAATTGTCATGCATCATGGG+AGG + chr4.2:35087339-35087358 None:intergenic 45.0%
GAGCTGTATGCGAAGGTAAT+TGG - chr4.2:35090278-35090297 MS.gene063015:intron 45.0%
GGAAAGAGCTTGTGTGTAAG+AGG + chr4.2:35087318-35087337 None:intergenic 45.0%
GGGGTACAAAATCGCACAAT+TGG + chr4.2:35087478-35087497 None:intergenic 45.0%
GGGGTGCAAAATCGTACAAT+TGG - chr4.2:35088223-35088242 MS.gene063015:intron 45.0%
GTTGTTGCAGTTGAGGTTAC+TGG - chr4.2:35089412-35089431 MS.gene063015:intron 45.0%
TCATGCTTCGCTTAGCGTAA+GGG - chr4.2:35086503-35086522 MS.gene063015:CDS 45.0%
TCCAATAAAGCCCTGTCTGT+TGG + chr4.2:35090233-35090252 None:intergenic 45.0%
TCCACCCAATTAGCACATGT+AGG + chr4.2:35090555-35090574 None:intergenic 45.0%
TCCAGGAACAAAGTTGACTG+TGG + chr4.2:35089443-35089462 None:intergenic 45.0%
TCCTACATGTGCTAATTGGG+TGG - chr4.2:35090551-35090570 MS.gene063015:intron 45.0%
TGGGGTGCAAAATCAGAATG+GGG + chr4.2:35087510-35087529 None:intergenic 45.0%
TGTTGCAGTTGAGGTTACTG+GGG - chr4.2:35089414-35089433 MS.gene063015:intron 45.0%
TTACGCTAAGCGAAGCATGA+GGG + chr4.2:35086503-35086522 None:intergenic 45.0%
! GTTTTTCGTGCAGTGTTAGC+TGG - chr4.2:35087182-35087201 MS.gene063015:intron 45.0%
! TCCAACAGACAGGGCTTTAT+TGG - chr4.2:35090229-35090248 MS.gene063015:intron 45.0%
! TCCCAGTAAGCATTGTGCTT+TGG - chr4.2:35090483-35090502 MS.gene063015:intron 45.0%
!! AAAAGCGCTTTGTGCCAGTA+CGG + chr4.2:35091017-35091036 None:intergenic 45.0%
!! GAGGGCACTAATCTAAGCAA+AGG + chr4.2:35087299-35087318 None:intergenic 45.0%
!! GCTTGTTGGTAGTATGAAGC+AGG + chr4.2:35088848-35088867 None:intergenic 45.0%
!!! AAATTTAATTTTTAAAAATC+TGG - chr4.2:35087752-35087771 MS.gene063015:intron 5.0%
!!! AATATTTTTATGATTTTTTT+GGG - chr4.2:35088145-35088164 MS.gene063015:intron 5.0%
!!! ATTTTCAAAATTTTAAAAAA+AGG + chr4.2:35088035-35088054 None:intergenic 5.0%
!!! TTCTAATTTTTTAAATTTTT+TGG + chr4.2:35087561-35087580 None:intergenic 5.0%
AGAGCACATCCAGAGAGATC+CGG - chr4.2:35089947-35089966 MS.gene063015:intron 50.0%
AGCTTACCACTGCCTGTGAA+AGG - chr4.2:35089658-35089677 MS.gene063015:intron 50.0%
CAGTTTCGTTCACTTGGGCA+TGG - chr4.2:35089630-35089649 MS.gene063015:intron 50.0%
CCCACAGTCAACTTTGTTCC+TGG - chr4.2:35089439-35089458 MS.gene063015:intron 50.0%
CGGCTTCCTGATGCTAAACA+AGG - chr4.2:35089577-35089596 MS.gene063015:intron 50.0%
CTCATGCTTCGCTTAGCGTA+AGG - chr4.2:35086502-35086521 MS.gene063015:CDS 50.0%
CTTACGCTAAGCGAAGCATG+AGG + chr4.2:35086504-35086523 None:intergenic 50.0%
GCACAACATACCCTTCTTCC+AGG + chr4.2:35089460-35089479 None:intergenic 50.0%
GGGGTGCAAAATCAGAATGG+GGG + chr4.2:35087509-35087528 None:intergenic 50.0%
GGGGTGCAAAATCGCACAAT+TGG - chr4.2:35088283-35088302 MS.gene063015:intron 50.0%
GTTGCAGTTGAGGTTACTGG+GGG - chr4.2:35089415-35089434 MS.gene063015:intron 50.0%
TACGCTAAGCGAAGCATGAG+GGG + chr4.2:35086502-35086521 None:intergenic 50.0%
TCCTTTGTGCTTCCAGCTTG+CGG - chr4.2:35089387-35089406 MS.gene063015:intron 50.0%
TGTCCAAGGACCATCAAACC+CGG + chr4.2:35089969-35089988 None:intergenic 50.0%
TTCTGTTGGCGATGAGAGCA+CGG + chr4.2:35086471-35086490 None:intergenic 50.0%
! CAAGCTGGAAGCACAAAGGA+AGG + chr4.2:35089387-35089406 None:intergenic 50.0%
! GTTTGATGGTCCTTGGACAG+AGG - chr4.2:35089970-35089989 MS.gene063015:intron 50.0%
! TGGCTTTGCACCAAGCTCAA+AGG - chr4.2:35090970-35090989 MS.gene063015:intron 50.0%
!! GTACTGGCACAAAGCGCTTT+TGG - chr4.2:35091016-35091035 MS.gene063015:CDS 50.0%
ACCAAGACCGGTGGACCTAA+TGG - chr4.2:35086654-35086673 MS.gene063015:intron 55.0%
ACCATTAGGTCCACCGGTCT+TGG + chr4.2:35086658-35086677 None:intergenic 55.0%
ATGCATCCTCATCCTGCCAG+AGG + chr4.2:35090907-35090926 None:intergenic 55.0%
ATTCTCCCTCTGGCAGGATG+AGG - chr4.2:35090898-35090917 MS.gene063015:intron 55.0%
CCAGAGAGATCCGGGTTTGA+TGG - chr4.2:35089956-35089975 MS.gene063015:intron 55.0%
CCATCAAACCCGGATCTCTC+TGG + chr4.2:35089959-35089978 None:intergenic 55.0%
CCTTTGTGCTTCCAGCTTGC+GGG - chr4.2:35089388-35089407 MS.gene063015:intron 55.0%
CTCAAAGGCAACTGCTCCTG+TGG - chr4.2:35090985-35091004 MS.gene063015:intron 55.0%
GAGCACATCCAGAGAGATCC+GGG - chr4.2:35089948-35089967 MS.gene063015:intron 55.0%
GATGCAAAGACCAAGACCGG+TGG - chr4.2:35086645-35086664 MS.gene063015:intron 55.0%
GGAGCAGTTGCCTTTGAGCT+TGG + chr4.2:35090983-35091002 None:intergenic 55.0%
TCCTGTGGATGCAACCGTAC+TGG - chr4.2:35091000-35091019 MS.gene063015:CDS 55.0%
TGATTCAGGTGGCACGATGC+TGG - chr4.2:35086615-35086634 MS.gene063015:intron 55.0%
TGCATCCTCATCCTGCCAGA+GGG + chr4.2:35090906-35090925 None:intergenic 55.0%
TTCAGAGGGTCCTCTGTCCA+AGG + chr4.2:35089983-35090002 None:intergenic 55.0%
! GAGGGGAGCACAGTTTCTGT+TGG + chr4.2:35086485-35086504 None:intergenic 55.0%
! GATCCGGGTTTGATGGTCCT+TGG - chr4.2:35089963-35089982 MS.gene063015:intron 55.0%
!! TGCGGGTGTTGTTGCAGTTG+AGG - chr4.2:35089405-35089424 MS.gene063015:intron 55.0%
ACCGAGGATCACCACTGCAG+CGG + chr4.2:35091053-35091072 None:intergenic 60.0%
AGTTGTAGCTGCCGCTGCAG+TGG - chr4.2:35091039-35091058 MS.gene063015:CDS 60.0%
ATCAGGAAGCCGCCCATCTC+TGG + chr4.2:35089569-35089588 None:intergenic 60.0%
CTGCAACAACACCCGCAAGC+TGG + chr4.2:35089402-35089421 None:intergenic 60.0%
GCCAGTACGGTTGCATCCAC+AGG + chr4.2:35091004-35091023 None:intergenic 60.0%
! ACTGTCTGGGGCACATACGC+TGG - chr4.2:35089843-35089862 MS.gene063015:intron 60.0%
! CCCGCAAGCTGGAAGCACAA+AGG + chr4.2:35089391-35089410 None:intergenic 60.0%
GCCGCTGCAGTGGTGATCCT+CGG - chr4.2:35091049-35091068 MS.gene063015:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 35086403 35091105 35086403 ID=MS.gene063015
chr4.2 mRNA 35086403 35091105 35086403 ID=MS.gene063015.t1;Parent=MS.gene063015
chr4.2 exon 35090990 35091105 35090990 ID=MS.gene063015.t1.exon1;Parent=MS.gene063015.t1
chr4.2 CDS 35090990 35091105 35090990 ID=cds.MS.gene063015.t1;Parent=MS.gene063015.t1
chr4.2 exon 35090761 35090885 35090761 ID=MS.gene063015.t1.exon2;Parent=MS.gene063015.t1
chr4.2 CDS 35090761 35090885 35090761 ID=cds.MS.gene063015.t1;Parent=MS.gene063015.t1
chr4.2 exon 35090566 35090615 35090566 ID=MS.gene063015.t1.exon3;Parent=MS.gene063015.t1
chr4.2 CDS 35090566 35090615 35090566 ID=cds.MS.gene063015.t1;Parent=MS.gene063015.t1
chr4.2 exon 35088040 35088105 35088040 ID=MS.gene063015.t1.exon4;Parent=MS.gene063015.t1
chr4.2 CDS 35088040 35088105 35088040 ID=cds.MS.gene063015.t1;Parent=MS.gene063015.t1
chr4.2 exon 35087910 35087958 35087910 ID=MS.gene063015.t1.exon5;Parent=MS.gene063015.t1
chr4.2 CDS 35087910 35087958 35087910 ID=cds.MS.gene063015.t1;Parent=MS.gene063015.t1
chr4.2 exon 35087644 35087726 35087644 ID=MS.gene063015.t1.exon6;Parent=MS.gene063015.t1
chr4.2 CDS 35087644 35087726 35087644 ID=cds.MS.gene063015.t1;Parent=MS.gene063015.t1
chr4.2 exon 35087485 35087564 35087485 ID=MS.gene063015.t1.exon7;Parent=MS.gene063015.t1
chr4.2 CDS 35087485 35087564 35087485 ID=cds.MS.gene063015.t1;Parent=MS.gene063015.t1
chr4.2 exon 35087216 35087318 35087216 ID=MS.gene063015.t1.exon8;Parent=MS.gene063015.t1
chr4.2 CDS 35087216 35087318 35087216 ID=cds.MS.gene063015.t1;Parent=MS.gene063015.t1
chr4.2 exon 35086403 35086594 35086403 ID=MS.gene063015.t1.exon9;Parent=MS.gene063015.t1
chr4.2 CDS 35086403 35086594 35086403 ID=cds.MS.gene063015.t1;Parent=MS.gene063015.t1
Gene Sequence

>MS.gene063015

ATGGCGTTCCCGGTAGTAGTAGACTCAGAGTATCTCAAGGAAATCGAAAAAGCTCGTCGCGATCTCCGTGCTCTCATCGCCAACAGAAACTGTGCTCCCCTCATGCTTCGCTTAGCGTAAGGGATTTCTCTTCATCTTCACATTTCCTTCCTTCCGATTTCGGTTTCTTACGTTCGTTAATTTCACGGTCAACGCTTTCGATTTTGTTAATCTGATTCAGGTGGCACGATGCTGGAACTTATGATGCAAAGACCAAGACCGGTGGACCTAATGGTTCTATTCGGAACGAGGAAGAGTTTTCTCATGGTGCTAATAATGGATTGAAGAAAGCTATTGATTTTTGCGGTATATATATTATTACTATTCTATTCTATTCTATTCAATTTAATCAATTTCACCTTCACTTTTTTGTTGTTGTAAAACTAGTATGAATATCATATAATATCATTGGTTTCCTTTCTAAGAGTTTTCTTGTTTTCTTATGTCACAGAGGAAGTGAAGGCAAAACATCCTAAGATCTCATATGCAGACCTTTATCAGGTGATTATTTACCTTCACTCACTTGTTATGTAAATCTGCAATAAATCCAATAATTTTGTGTTCAAGTGCTTTTGCTAGAAGTTGTAGAATGGGGTCAATGACTTTCAATTTTGTCTCGAGTGTGTGCAACATGATTTTGATTCTTTATGTTATGTCTATCGCGATTCGCTACACTCCTATTTCTGCTACATTGTTTGTGACTCTGGACACTCAAAACTTTGGGATTGCTGCTTTGCTTAGTTTTTCGTGCAGTGTTAGCTGGTATTAGTTTACGCAGTTCTTGTTTCTATTTTGAAACTGAATCTCATTATTAGGTGGTTTGTATGAATCTTGAAGTTACATACATAGCATGCCCTTTGCTTAGATTAGTGCCCTCTTACACACAAGCTCTTTCCTCCCATGATGCATGACAATTCCGAACTATTAACTATAATAATTGAATGGCTTAATTGCACTTTTGCACCCCATTGTTTCAAACGAGCGATTTTGCACCCCATTGTTTCAAACGAGCGATTTTGCACCCTATATTTTGCCAATTGTGCGATTTTGTACCCCATAGTTTTCCCCCATTCTGATTTTGCACCCCAAAAAATCATAAAAATATTCAGTTTTTTTCCAAAAAATTTAAAAAATTAGAAAAAAATCAGAAAATATAGTAATTGTTTTTAAAATCAGAAAAAAATCATATATCCAGATTTTAAAAAAAGGTCAGATTTTTTTTAAATAATTCTGGAAAAAAATTTAATCTTTAAAAATCTGGATACAAATTTTAAAAAAAGGACAGATTTTTTTTTAAAAATTCTGGAAAAAAATTTAATTTTTAAAAATCTGGATACAAATTTTAAAAATAGGTCAGATTTTTTTTAAAATTTAATTTTCAAAATACAAAAAAATCTGGATTTTTAAAAATTAAATTTAAAATTTGTAAATTTTCAAAAAGTAAATTTTGTATATTTGGAAAAAAATCTGACCTTTTAAAAATCTGAATACAAAAAAGTAAATTTTAAAAAAATCTGACCTTTTTTTAAAATTTGTATCCAGATTTTTCAAAATTAAATTTTTTTCCAGAATTTTTTTAAAAAAATCTGACCTTTTTTTAAAATTTTGAAAATTAAATTCCAGAATTTAAAAAAAAAATCTGATTATATTTTCTGATTTTTTAAATTTTTTTTCGATTTTTTAAATTTTTTGGAAAAAAACTGAATATTTTTATGATTTTTTTGGGTGCAAAATCAGAAAGGGGAAAACTATGGGGTGCAAAATCGCTCGTTTGAAACAATGGGGTGCAAAATCGTACAATTGGCAAAATATAGGGTGCAAAATCGCTCGTTTGAAACAATGGGGTGCAAAATCGCACAATTGGCAAAATATAGGGGGTAAAAGTGCAATTAAGCCTAATTGAATACTAAAATAACAAAGAGATTGACTTGCTTTGCTTAGTTAATCATCTCACTGTGTTGTTCTGTTTGTTTTTTTTATTCTTTTTATGATTATGTGTTGTTTTTTTTCCCTTGTGCTTGGTTACCTCTTTAAGAAATTGTCTTCTACCCAAAGAAAAAAAGGGATGGTTGTTCTATTCAATCATTTACAGGCTTGGTTATCTTGCCTAATGCTGTAATACTTTGTGTGAGGTTTCAAGGTTTTTGACAAAGTTGTCAAGGATTATATTATGCCTTGAATTAGGATAAGGGGATTATTCTGTGATAAACCATTTGAAGGGGGAAAACTAATTTGTTTGCTCTTTACAAACTTCCATTTTCTGAACTCTTTATTTCATTAGTTCAGTTGTTTTATGTCATTTTGAGAGAATATGCATTTGTAATATATGAAGATTACAACAGCACCTTGTTCCCTTAAACAAATTTTGGCAACGTCCTGCCTCAATCATTTCAATGACACTGACCTGCTTCATACTACCAACAAGCCTTTCTTAGGCAAAAACGTGATGAAATAGAACTACATTTCTTGGTAGCTTTATGAAATCTGGAGTAATTACAGAAGTACACCTAAATTTCGATAGTTATGAAATGTATATAAGTGAAGCTCAAGTTCTTGTGTTGAGTTTCAAGTTTTCTTTTGTTAATAGTAATTTACATGTATCCAAACTTAGTGGCTAATATCTCTACAATGAAGTTGAATGCCGTTTGATTTTCATATATAGTAATTTTAAAAATTTGTAAGTGTTTCAAATTTACTTTTGAAAATCGAAGATTCCCTTAATTACTTTGTAAGTGTCTATCAGAATCAAGACAGTGATCGGAGTTTCTTGCATATCACATATAAAGTGATTAAATCCGGTACATATTGAAATAGAGAGGAAGGAGGAGAATTATTTATCACTCATGCAGGGCATGCCTTGTATAAAACAAGATATGCACTTGTTAGTGAAGAACTAAACCAGCTGCGTCATAGATTACATGAATATGAAATAACAATTATTTCCTTCCTTTGTGCTTCCAGCTTGCGGGTGTTGTTGCAGTTGAGGTTACTGGGGGTCCCACAGTCAACTTTGTTCCTGGAAGAAGGGTATGTTGTGCAATACCTTTCGTTACAATATTAGTTATGAAATCCTGAACTTGTCATTCTCTAATTTTCTGTGTCATGTAGGATTCAAAAGTATGTACCAGAGATGGGCGGCTTCCTGATGCTAAACAAGGTGTGTTTCTAAATTATTGTCAGTGGTACAACAGTTTCGTTCACTTGGGCATGGTAAATAGCTTACCACTGCCTGTGAAAGGATTTTCTTTTCTCTGAATTCCCTACACATCAACAAAATTAAGAAATAATAAGATTAAGACTGTTATATGAAAGCATATAAACATGTCAATGCTATTGGTAGGTGTGTCGCATCTCCGTGATATCTTTTATCGTATGGGCTTGACTGACAAAGATATTGTTGCACTGTCTGGGGCACATACGCTGGTGATTCTCCTTTCTATATCTTTTTATTATTTGCTGTGATCGCGGCCATAAATTCTTATTTTATTTTCTGTGTTTCAAGGGAAGAGCACATCCAGAGAGATCCGGGTTTGATGGTCCTTGGACAGAGGACCCTCTGAAGTTTGATAACTCATATTTTCAGTAAGACTTACGTTGTGTGCATTATCATCAATTTTTTTGCTTTACTACGAGGACATTTGTAGATTTTCAGTTTTGCATCCCAATATTTTATTTTTATTTTTTAATTTTTATTTTGGATAAAGAGCTTGATTTTTTATTTACCGCTAAATATCTTTGTCAATATCAGGATACTTTTGGAAGAAGATTCTGCAGCTCTGCTTAAACTTCCAACAGACAGGGCTTTATTGGATGATCCTGAATTTCGCCGTTATGTTGAGCTGTATGCGAAGGTAATTGGGATTGTTTAATTAAAATAACATATACATAATCCCTGCTGAAAACTGATTTCATAAAGTGTTCTGCCAAATATGGGTTTCCAATAGCATTTTATAAGTCCATTTGTACTCTTGTTGCATTTGTTTATTGGATCAATCTTTTGATTGGAACTCATTGCATTAAGTAGGTTGATTAGTAGGTCCTTCCCAGTAAGCATTGTGCTTTGGAGTTTACTAATGCCATCTGCGATTATCACGATGTTTCATAAGATTTCCTACATGTGCTAATTGGGTGGAAAAACCAACAGCTTTCTTACTTAATATGTGATAGATATGAGCTCTTTCTACCTGGCCAACTACTTAATACGTTGGTCTTGTTTTCCTTATGTTACAACTATTAAGGTTGAAGATCTACATTTAAACTAAATAACGTACTTATTAGATCATTTATATGTAGACTAACCTACCCAAAACATTCATGCCAATTTTCTGTTTTGCTAAAAAATAATCGAAGAAAATCAATAGTGGTTATTTGCGTCAAAGTTCTGAATTCTGTTGATCCATCATTAAATTAAATGAATCTGTCTGCTGTTTCATGTTTTTTCTTTCTTCTAATTCTAATTCTCCCTCTGGCAGGATGAGGATGCATTTTTTCGAGATTATGCTGAATCACATAAGAAACTTTCAGAGCTTGGCTTTGCACCAAGCTCAAAGGCAACTGCTCCTGTGGATGCAACCGTACTGGCACAAAGCGCTTTTGGAGTTGTAGCTGCCGCTGCAGTGGTGATCCTCGGTTACTTGTATGAAACTCACAAAAGAGGGAAGTAG
Protein sequence

>MS.gene063015.t1

MAFPVVVDSEYLKEIEKARRDLRALIANRNCAPLMLRLAWHDAGTYDAKTKTGGPNGSIRNEEEFSHGANNGLKKAIDFCEEVKAKHPKISYADLYQLAGVVAVEVTGGPTVNFVPGRRDSKVCTRDGRLPDAKQGVSHLRDIFYRMGLTDKDIVALSGAHTLGRAHPERSGFDGPWTEDPLKFDNSYFQILLEEDSAALLKLPTDRALLDDPEFRRYVELYAKDEDAFFRDYAESHKKLSELGFAPSSKATAPVDATVLAQSAFGVVAAAAVVILGYLYETHKRGK