Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057687.t1 | XP_003607199.1 | 94.2 | 278 | 3 | 1 | 2 | 266 | 10 | 287 | 1.90E-143 | 518.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057687.t1 | Q42564 | 75.3 | 279 | 55 | 2 | 2 | 266 | 9 | 287 | 7.5e-117 | 421.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057687.t1 | G7JNF5 | 94.2 | 278 | 3 | 1 | 2 | 266 | 10 | 287 | 1.4e-143 | 518.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene057687 | 0.83305 | 6.66E-56 | -1.69E-46 |
| MS.gene049865 | MS.gene057687 | 0.804693 | 1.91E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene057687 | 0.800968 | 1.12E-48 | -1.69E-46 |
| MS.gene050170 | MS.gene057687 | 0.817607 | 3.02E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene057687 | 0.810389 | 1.18E-50 | -1.69E-46 |
| MS.gene050496 | MS.gene057687 | 0.82564 | 4.20E-54 | -1.69E-46 |
| MS.gene050697 | MS.gene057687 | 0.801595 | 8.36E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene057687 | 0.805289 | 1.43E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene057687 | 0.808389 | 3.17E-50 | -1.69E-46 |
| MS.gene050876 | MS.gene057687 | 0.838792 | 2.33E-57 | -1.69E-46 |
| MS.gene050904 | MS.gene057687 | 0.808489 | 3.02E-50 | -1.69E-46 |
| MS.gene051509 | MS.gene057687 | 0.818719 | 1.69E-52 | -1.69E-46 |
| MS.gene052066 | MS.gene057687 | 0.840325 | 9.31E-58 | -1.69E-46 |
| MS.gene053633 | MS.gene057687 | 0.805544 | 1.27E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene057687 | 0.809925 | 1.49E-50 | -1.69E-46 |
| MS.gene055776 | MS.gene057687 | 0.803604 | 3.22E-49 | -1.69E-46 |
| MS.gene055849 | MS.gene057687 | 0.810707 | 1.01E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene057687 | 0.805587 | 1.24E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene057687 | 0.836357 | 9.81E-57 | -1.69E-46 |
| MS.gene056510 | MS.gene057687 | 0.800086 | 1.70E-48 | -1.69E-46 |
| MS.gene056878 | MS.gene057687 | 0.808675 | 2.76E-50 | -1.69E-46 |
| MS.gene057684 | MS.gene057687 | 0.898183 | 6.81E-77 | -1.69E-46 |
| MS.gene057687 | MS.gene057872 | 0.897729 | 1.06E-76 | -1.69E-46 |
| MS.gene057687 | MS.gene059837 | 0.83288 | 7.34E-56 | -1.69E-46 |
| MS.gene057687 | MS.gene059865 | 0.825246 | 5.20E-54 | -1.69E-46 |
| MS.gene057687 | MS.gene060595 | -0.84226 | 2.88E-58 | -1.69E-46 |
| MS.gene057687 | MS.gene060703 | 0.821597 | 3.71E-53 | -1.69E-46 |
| MS.gene057687 | MS.gene060778 | 0.836953 | 6.92E-57 | -1.69E-46 |
| MS.gene057687 | MS.gene060982 | 0.83314 | 6.33E-56 | -1.69E-46 |
| MS.gene057687 | MS.gene061556 | 0.802838 | 4.64E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene061862 | 0.812277 | 4.60E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene061886 | 0.82213 | 2.79E-53 | -1.69E-46 |
| MS.gene057687 | MS.gene061887 | 0.813886 | 2.04E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene062294 | 0.864579 | 1.10E-64 | -1.69E-46 |
| MS.gene057687 | MS.gene062923 | 0.823492 | 1.35E-53 | -1.69E-46 |
| MS.gene057687 | MS.gene062925 | 0.845523 | 3.85E-59 | -1.69E-46 |
| MS.gene057687 | MS.gene063015 | 0.859708 | 3.43E-63 | -1.69E-46 |
| MS.gene057687 | MS.gene063410 | 0.831584 | 1.54E-55 | -1.69E-46 |
| MS.gene057687 | MS.gene06346 | 0.832748 | 7.92E-56 | -1.69E-46 |
| MS.gene057687 | MS.gene063965 | 0.831132 | 1.99E-55 | -1.69E-46 |
| MS.gene057687 | MS.gene064148 | 0.838112 | 3.49E-57 | -1.69E-46 |
| MS.gene057687 | MS.gene064435 | 0.810739 | 9.92E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene064707 | 0.808529 | 2.96E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene064971 | 0.848507 | 5.86E-60 | -1.69E-46 |
| MS.gene057687 | MS.gene065323 | 0.858746 | 6.67E-63 | -1.69E-46 |
| MS.gene057687 | MS.gene065360 | 0.815572 | 8.63E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene065502 | 0.863705 | 2.06E-64 | -1.69E-46 |
| MS.gene057687 | MS.gene065658 | 0.821079 | 4.89E-53 | -1.69E-46 |
| MS.gene057687 | MS.gene066003 | 0.826783 | 2.24E-54 | -1.69E-46 |
| MS.gene057687 | MS.gene066054 | 0.802573 | 5.26E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene06750 | 0.823774 | 1.16E-53 | -1.69E-46 |
| MS.gene057687 | MS.gene067954 | 0.804506 | 2.09E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene068071 | 0.812273 | 4.61E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene068194 | 0.805839 | 1.10E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene068771 | 0.832825 | 7.58E-56 | -1.69E-46 |
| MS.gene057687 | MS.gene069355 | 0.802601 | 5.19E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene06986 | 0.807317 | 5.36E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene071003 | 0.80674 | 7.10E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene071900 | 0.854962 | 8.68E-62 | -1.69E-46 |
| MS.gene057687 | MS.gene071901 | 0.83613 | 1.12E-56 | -1.69E-46 |
| MS.gene057687 | MS.gene072303 | 0.831504 | 1.61E-55 | -1.69E-46 |
| MS.gene057687 | MS.gene072496 | 0.80578 | 1.13E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene072871 | 0.835137 | 2.00E-56 | -1.69E-46 |
| MS.gene057687 | MS.gene072875 | 0.815968 | 7.04E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene07348 | 0.805395 | 1.36E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene07349 | 0.86552 | 5.56E-65 | -1.69E-46 |
| MS.gene057687 | MS.gene073565 | 0.822619 | 2.15E-53 | -1.69E-46 |
| MS.gene057687 | MS.gene073608 | 0.828832 | 7.22E-55 | -1.69E-46 |
| MS.gene057687 | MS.gene073640 | 0.821417 | 4.08E-53 | -1.69E-46 |
| MS.gene057687 | MS.gene08550 | 0.807468 | 4.98E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene08766 | 0.814026 | 1.90E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene09797 | 0.810328 | 1.22E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene09865 | 0.80059 | 1.34E-48 | -1.69E-46 |
| MS.gene057687 | MS.gene20892 | 0.835982 | 1.22E-56 | -1.69E-46 |
| MS.gene057687 | MS.gene21150 | 0.86644 | 2.85E-65 | -1.69E-46 |
| MS.gene057687 | MS.gene22903 | 0.805098 | 1.57E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene22911 | 0.804954 | 1.69E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene23115 | 0.813731 | 2.21E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene23350 | 0.824239 | 8.99E-54 | -1.69E-46 |
| MS.gene057687 | MS.gene23352 | 0.843102 | 1.72E-58 | -1.69E-46 |
| MS.gene057687 | MS.gene26384 | 0.806114 | 9.63E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene26385 | 0.821398 | 4.13E-53 | -1.69E-46 |
| MS.gene057687 | MS.gene26532 | -0.807838 | 4.16E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene26574 | 0.845196 | 4.72E-59 | -1.69E-46 |
| MS.gene057687 | MS.gene26662 | 0.808575 | 2.90E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene27893 | 0.808856 | 2.52E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene28021 | 0.809424 | 1.91E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene28105 | 0.824031 | 1.01E-53 | -1.69E-46 |
| MS.gene057687 | MS.gene30149 | 0.806352 | 8.58E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene31105 | 0.873739 | 1.16E-67 | -1.69E-46 |
| MS.gene057687 | MS.gene31106 | 0.84896 | 4.39E-60 | -1.69E-46 |
| MS.gene057687 | MS.gene32026 | 0.814554 | 1.45E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene32652 | 0.816197 | 6.26E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene32656 | 0.806986 | 6.30E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene32996 | 0.810624 | 1.05E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene33603 | 0.841452 | 4.71E-58 | -1.69E-46 |
| MS.gene057687 | MS.gene34025 | 0.832666 | 8.30E-56 | -1.69E-46 |
| MS.gene057687 | MS.gene34168 | 0.801459 | 8.91E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene34171 | 0.833632 | 4.77E-56 | -1.69E-46 |
| MS.gene057687 | MS.gene34383 | 0.834288 | 3.27E-56 | -1.69E-46 |
| MS.gene057687 | MS.gene34554 | 0.835106 | 2.04E-56 | -1.69E-46 |
| MS.gene057687 | MS.gene38046 | 0.82747 | 1.54E-54 | -1.69E-46 |
| MS.gene057687 | MS.gene38214 | 0.822851 | 1.90E-53 | -1.69E-46 |
| MS.gene057687 | MS.gene38328 | 0.840077 | 1.08E-57 | -1.69E-46 |
| MS.gene057687 | MS.gene39025 | 0.809297 | 2.03E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene39520 | 0.80729 | 5.43E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene40101 | 0.81516 | 1.07E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene40110 | 0.800263 | 1.56E-48 | -1.69E-46 |
| MS.gene057687 | MS.gene40943 | 0.818978 | 1.48E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene42171 | 0.800383 | 1.48E-48 | -1.69E-46 |
| MS.gene057687 | MS.gene42301 | 0.807816 | 4.20E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene42674 | 0.822238 | 2.64E-53 | -1.69E-46 |
| MS.gene057687 | MS.gene44108 | 0.805384 | 1.37E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene44543 | 0.82617 | 3.14E-54 | -1.69E-46 |
| MS.gene057687 | MS.gene45736 | 0.804454 | 2.14E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene47475 | 0.818714 | 1.70E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene47524 | 0.807342 | 5.30E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene47951 | 0.802244 | 6.15E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene47989 | 0.805447 | 1.33E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene48012 | 0.819216 | 1.30E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene48646 | 0.801294 | 9.63E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene50709 | 0.843943 | 1.03E-58 | -1.69E-46 |
| MS.gene057687 | MS.gene50712 | 0.814633 | 1.39E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene52766 | 0.807215 | 5.64E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene53614 | 0.845892 | 3.06E-59 | -1.69E-46 |
| MS.gene057687 | MS.gene54068 | 0.847645 | 1.01E-59 | -1.69E-46 |
| MS.gene057687 | MS.gene54413 | 0.807091 | 5.99E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene54415 | 0.800016 | 1.76E-48 | -1.69E-46 |
| MS.gene057687 | MS.gene55803 | 0.817282 | 3.58E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene56598 | 0.811073 | 8.40E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene56878 | 0.808163 | 3.55E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene57998 | 0.804693 | 1.91E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene58416 | 0.817464 | 3.25E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene59603 | 0.800503 | 1.40E-48 | -1.69E-46 |
| MS.gene057687 | MS.gene60360 | 0.81678 | 4.63E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene62198 | 0.838827 | 2.28E-57 | -1.69E-46 |
| MS.gene057687 | MS.gene62307 | -0.837811 | 4.17E-57 | -1.69E-46 |
| MS.gene057687 | MS.gene63020 | 0.819719 | 1.00E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene63367 | -0.847299 | 1.26E-59 | -1.69E-46 |
| MS.gene057687 | MS.gene63951 | 0.824895 | 6.30E-54 | -1.69E-46 |
| MS.gene057687 | MS.gene64286 | 0.846761 | 1.77E-59 | -1.69E-46 |
| MS.gene057687 | MS.gene66774 | 0.801469 | 8.87E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene68126 | 0.810395 | 1.18E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene68529 | 0.825484 | 4.57E-54 | -1.69E-46 |
| MS.gene057687 | MS.gene68625 | 0.834442 | 2.99E-56 | -1.69E-46 |
| MS.gene057687 | MS.gene68980 | 0.832617 | 8.54E-56 | -1.69E-46 |
| MS.gene057687 | MS.gene69259 | 0.800566 | 1.36E-48 | -1.69E-46 |
| MS.gene057687 | MS.gene69325 | 0.80812 | 3.62E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene69332 | 0.832543 | 8.91E-56 | -1.69E-46 |
| MS.gene057687 | MS.gene69450 | 0.814958 | 1.18E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene69456 | 0.8044 | 2.20E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene70069 | 0.802574 | 5.26E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene70359 | 0.811081 | 8.37E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene71267 | 0.837452 | 5.16E-57 | -1.69E-46 |
| MS.gene057687 | MS.gene71268 | 0.809518 | 1.82E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene71651 | 0.84946 | 3.19E-60 | -1.69E-46 |
| MS.gene057687 | MS.gene71710 | 0.816191 | 6.28E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene71742 | 0.827968 | 1.17E-54 | -1.69E-46 |
| MS.gene057687 | MS.gene72108 | 0.800005 | 1.77E-48 | -1.69E-46 |
| MS.gene057687 | MS.gene72999 | 0.807508 | 4.88E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene73461 | 0.829957 | 3.85E-55 | -1.69E-46 |
| MS.gene057687 | MS.gene73910 | 0.814974 | 1.17E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene74217 | 0.813497 | 2.48E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene74228 | 0.810606 | 1.06E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene76840 | 0.829401 | 5.26E-55 | -1.69E-46 |
| MS.gene057687 | MS.gene78396 | 0.850534 | 1.60E-60 | -1.69E-46 |
| MS.gene057687 | MS.gene80234 | 0.834121 | 3.60E-56 | -1.69E-46 |
| MS.gene057687 | MS.gene80239 | 0.826964 | 2.03E-54 | -1.69E-46 |
| MS.gene057687 | MS.gene81067 | 0.810797 | 9.64E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene81230 | 0.819315 | 1.24E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene81988 | 0.810326 | 1.22E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene82707 | 0.81982 | 9.50E-53 | -1.69E-46 |
| MS.gene057687 | MS.gene82916 | 0.802768 | 4.80E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene82917 | 0.828317 | 9.61E-55 | -1.69E-46 |
| MS.gene057687 | MS.gene84011 | 0.818536 | 1.86E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene84043 | 0.814753 | 1.31E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene86071 | 0.801642 | 8.18E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene86206 | 0.813037 | 3.13E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene86293 | 0.829646 | 4.58E-55 | -1.69E-46 |
| MS.gene057687 | MS.gene87054 | 0.802272 | 6.07E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene89091 | 0.828328 | 9.55E-55 | -1.69E-46 |
| MS.gene057687 | MS.gene89722 | 0.802707 | 4.94E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene90269 | 0.810958 | 8.90E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene90796 | 0.818036 | 2.42E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene92042 | 0.81153 | 6.69E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene92147 | 0.801602 | 8.33E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene92618 | 0.862074 | 6.55E-64 | -1.69E-46 |
| MS.gene057687 | MS.gene92976 | 0.812818 | 3.50E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene93192 | 0.83283 | 7.56E-56 | -1.69E-46 |
| MS.gene057687 | MS.gene93734 | 0.833703 | 4.58E-56 | -1.69E-46 |
| MS.gene057687 | MS.gene94356 | 0.823223 | 1.56E-53 | -1.69E-46 |
| MS.gene057687 | MS.gene94986 | 0.837927 | 3.89E-57 | -1.69E-46 |
| MS.gene057687 | MS.gene94987 | 0.82755 | 1.47E-54 | -1.69E-46 |
| MS.gene057687 | MS.gene95715 | 0.815631 | 8.38E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene96524 | 0.808129 | 3.60E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene97656 | 0.806524 | 7.89E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene98166 | 0.812143 | 4.92E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057687.t1 | MTR_4g073410 | 94.245 | 278 | 3 | 1 | 2 | 266 | 10 | 287 | 0.0 | 529 |
| MS.gene057687.t1 | MTR_5g022510 | 68.841 | 276 | 68 | 2 | 2 | 264 | 9 | 279 | 6.05e-140 | 395 |
| MS.gene057687.t1 | MTR_5g022510 | 68.293 | 246 | 60 | 2 | 32 | 264 | 14 | 254 | 9.58e-122 | 348 |
| MS.gene057687.t1 | MTR_4g061140 | 61.345 | 238 | 78 | 2 | 2 | 225 | 11 | 248 | 8.74e-101 | 294 |
| MS.gene057687.t1 | MTR_4g061140 | 61.017 | 236 | 78 | 2 | 2 | 223 | 11 | 246 | 5.07e-99 | 290 |
| MS.gene057687.t1 | MTR_4g061140 | 59.346 | 214 | 73 | 2 | 26 | 225 | 1 | 214 | 6.51e-85 | 253 |
| MS.gene057687.t1 | MTR_3g088160 | 46.565 | 262 | 100 | 7 | 6 | 227 | 100 | 361 | 1.02e-69 | 220 |
| MS.gene057687.t1 | MTR_3g088160 | 46.565 | 262 | 100 | 7 | 6 | 227 | 100 | 361 | 4.03e-69 | 220 |
| MS.gene057687.t1 | MTR_5g008440 | 53.333 | 165 | 62 | 2 | 60 | 223 | 31 | 181 | 1.39e-50 | 165 |
| MS.gene057687.t1 | MTR_3g107060 | 36.250 | 240 | 120 | 6 | 5 | 223 | 87 | 314 | 2.01e-39 | 139 |
| MS.gene057687.t1 | MTR_4g122640 | 29.231 | 260 | 125 | 10 | 24 | 228 | 69 | 324 | 1.27e-17 | 81.6 |
| MS.gene057687.t1 | MTR_3g072190 | 32.258 | 186 | 90 | 5 | 69 | 222 | 52 | 233 | 1.11e-15 | 74.7 |
| MS.gene057687.t1 | MTR_3g072190 | 28.745 | 247 | 119 | 8 | 27 | 222 | 60 | 300 | 1.74e-15 | 75.1 |
| MS.gene057687.t1 | MTR_1g077000 | 29.020 | 255 | 128 | 10 | 15 | 222 | 61 | 309 | 4.84e-15 | 73.9 |
| MS.gene057687.t1 | MTR_4g127670 | 27.778 | 270 | 135 | 8 | 24 | 237 | 55 | 320 | 9.90e-15 | 73.2 |
| MS.gene057687.t1 | MTR_4g095450 | 26.374 | 273 | 137 | 9 | 24 | 239 | 58 | 323 | 1.36e-13 | 69.7 |
| MS.gene057687.t1 | MTR_3g094670 | 26.857 | 175 | 90 | 5 | 82 | 222 | 134 | 304 | 1.10e-12 | 67.4 |
| MS.gene057687.t1 | MTR_2g008160 | 30.769 | 156 | 90 | 5 | 6 | 143 | 35 | 190 | 1.87e-12 | 66.6 |
| MS.gene057687.t1 | MTR_5g074710 | 29.482 | 251 | 116 | 12 | 27 | 222 | 59 | 303 | 3.27e-12 | 65.9 |
| MS.gene057687.t1 | MTR_7g086820 | 25.725 | 276 | 145 | 12 | 3 | 223 | 25 | 295 | 4.61e-12 | 65.5 |
| MS.gene057687.t1 | MTR_5g074740 | 29.719 | 249 | 118 | 11 | 27 | 222 | 59 | 303 | 3.79e-11 | 62.8 |
| MS.gene057687.t1 | MTR_2g008160 | 26.104 | 249 | 151 | 9 | 6 | 228 | 35 | 276 | 4.39e-11 | 62.4 |
| MS.gene057687.t1 | MTR_5g074760 | 28.685 | 251 | 118 | 11 | 27 | 222 | 59 | 303 | 4.79e-11 | 62.4 |
| MS.gene057687.t1 | MTR_2g008160 | 28.931 | 159 | 95 | 5 | 6 | 146 | 35 | 193 | 5.52e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057687.t1 | AT4G35000 | 75.269 | 279 | 55 | 2 | 2 | 266 | 9 | 287 | 4.40e-145 | 408 |
| MS.gene057687.t1 | AT4G35970 | 63.309 | 278 | 83 | 3 | 2 | 266 | 8 | 279 | 2.19e-122 | 350 |
| MS.gene057687.t1 | AT4G35970 | 66.977 | 215 | 57 | 2 | 2 | 203 | 8 | 221 | 1.22e-100 | 293 |
| MS.gene057687.t1 | AT3G09640 | 59.494 | 237 | 83 | 1 | 2 | 225 | 12 | 248 | 2.31e-98 | 288 |
| MS.gene057687.t1 | AT3G09640 | 59.494 | 237 | 83 | 1 | 2 | 225 | 12 | 248 | 2.31e-98 | 288 |
| MS.gene057687.t1 | AT1G07890 | 57.983 | 238 | 86 | 2 | 2 | 225 | 11 | 248 | 2.03e-95 | 281 |
| MS.gene057687.t1 | AT1G07890 | 57.983 | 238 | 86 | 2 | 2 | 225 | 11 | 248 | 2.03e-95 | 281 |
| MS.gene057687.t1 | AT1G07890 | 57.983 | 238 | 86 | 2 | 2 | 225 | 11 | 248 | 2.03e-95 | 281 |
| MS.gene057687.t1 | AT1G07890 | 57.983 | 238 | 86 | 2 | 2 | 225 | 11 | 248 | 2.03e-95 | 281 |
| MS.gene057687.t1 | AT1G07890 | 57.983 | 238 | 86 | 2 | 2 | 225 | 11 | 248 | 2.03e-95 | 281 |
| MS.gene057687.t1 | AT1G07890 | 57.983 | 238 | 86 | 2 | 2 | 225 | 11 | 248 | 2.03e-95 | 281 |
| MS.gene057687.t1 | AT1G07890 | 57.983 | 238 | 86 | 2 | 2 | 225 | 11 | 248 | 2.03e-95 | 281 |
| MS.gene057687.t1 | AT1G07890 | 57.384 | 237 | 87 | 2 | 2 | 224 | 11 | 247 | 3.33e-94 | 278 |
| MS.gene057687.t1 | AT4G08390 | 45.703 | 256 | 101 | 5 | 6 | 223 | 105 | 360 | 7.79e-69 | 217 |
| MS.gene057687.t1 | AT4G08390 | 45.703 | 256 | 101 | 5 | 6 | 223 | 106 | 361 | 8.63e-69 | 217 |
| MS.gene057687.t1 | AT4G08390 | 45.703 | 256 | 101 | 5 | 6 | 223 | 106 | 361 | 8.63e-69 | 217 |
| MS.gene057687.t1 | AT4G08390 | 45.703 | 256 | 101 | 5 | 6 | 223 | 106 | 361 | 8.63e-69 | 217 |
| MS.gene057687.t1 | AT1G77490 | 46.484 | 256 | 99 | 5 | 6 | 223 | 85 | 340 | 2.05e-68 | 218 |
| MS.gene057687.t1 | AT1G77490 | 46.484 | 256 | 99 | 5 | 6 | 223 | 85 | 340 | 2.65e-68 | 217 |
| MS.gene057687.t1 | AT4G08390 | 42.188 | 256 | 84 | 6 | 6 | 223 | 106 | 335 | 2.05e-58 | 189 |
| MS.gene057687.t1 | AT4G32320 | 37.788 | 217 | 105 | 5 | 27 | 223 | 117 | 323 | 7.70e-38 | 135 |
| MS.gene057687.t1 | AT2G24800 | 32.308 | 195 | 90 | 4 | 69 | 223 | 120 | 312 | 2.86e-18 | 83.2 |
| MS.gene057687.t1 | AT4G31760 | 31.443 | 194 | 92 | 5 | 69 | 223 | 118 | 309 | 2.02e-17 | 80.9 |
| MS.gene057687.t1 | AT3G28200 | 30.890 | 191 | 90 | 4 | 69 | 223 | 115 | 299 | 1.39e-16 | 78.6 |
| MS.gene057687.t1 | AT4G30170 | 27.481 | 262 | 117 | 8 | 24 | 223 | 58 | 308 | 1.58e-14 | 72.8 |
| MS.gene057687.t1 | AT4G33420 | 30.159 | 252 | 127 | 11 | 16 | 222 | 60 | 307 | 1.74e-14 | 72.4 |
| MS.gene057687.t1 | AT4G33420 | 30.040 | 253 | 128 | 11 | 15 | 222 | 106 | 354 | 2.48e-14 | 72.4 |
| MS.gene057687.t1 | AT4G37520 | 26.119 | 268 | 129 | 8 | 25 | 230 | 59 | 319 | 4.85e-13 | 68.6 |
| MS.gene057687.t1 | AT1G14550 | 27.881 | 269 | 137 | 11 | 7 | 222 | 39 | 303 | 6.90e-13 | 67.8 |
| MS.gene057687.t1 | AT1G14540 | 28.723 | 188 | 96 | 6 | 69 | 222 | 114 | 297 | 4.83e-11 | 62.4 |
| MS.gene057687.t1 | AT4G37530 | 33.108 | 148 | 70 | 5 | 25 | 146 | 59 | 203 | 8.33e-11 | 61.6 |
Find 74 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGTTGCAGTTGAGGTTAC+TGG | 0.120093 | 4.4:+35537046 | MS.gene057687:CDS |
| TCCAACAGACAGGGCTTTAT+TGG | 0.192934 | 4.4:+35537863 | MS.gene057687:CDS |
| CCTTTGTGCTTCCAGCTTGC+GGG | 0.246744 | 4.4:+35537022 | MS.gene057687:intron |
| TGTCAATATCAGGATACTTT+TGG | 0.287568 | 4.4:+35537812 | MS.gene057687:intron |
| TCAACATAACGGCGATATTC+AGG | 0.295094 | 4.4:-35537891 | None:intergenic |
| CCCACAGTCAACTTTGTTCC+TGG | 0.312965 | 4.4:+35537073 | MS.gene057687:CDS |
| GTACTGGCACAAAGCGCTTT+TGG | 0.320365 | 4.4:+35538650 | MS.gene057687:CDS |
| TTGTTGCAGTTGAGGTTACT+GGG | 0.345113 | 4.4:+35537047 | MS.gene057687:CDS |
| GGTAAATAATCACCTGATAA+AGG | 0.356498 | 4.4:-35535617 | None:intergenic |
| AGGTCTGCATATGAGATCTT+AGG | 0.374897 | 4.4:-35535597 | None:intergenic |
| GCACAACATACCCTTCTTCC+AGG | 0.375359 | 4.4:-35537091 | None:intergenic |
| AAAGATATTGTTGCACTGTC+TGG | 0.377559 | 4.4:+35537463 | MS.gene057687:CDS |
| CTCATATGCAGACCTTTATC+AGG | 0.378885 | 4.4:+35535605 | MS.gene057687:CDS |
| CATAAGAAACTTTCAGAGCT+TGG | 0.401756 | 4.4:+35538584 | MS.gene057687:CDS |
| ACCATTAGGTCCACCGGTCT+TGG | 0.414832 | 4.4:-35527953 | None:intergenic |
| CCATCAAACCCGGATCTCTC+TGG | 0.417971 | 4.4:-35537590 | None:intergenic |
| CCAGAGAGATCCGGGTTTGA+TGG | 0.424242 | 4.4:+35537590 | MS.gene057687:CDS |
| TCGTTCCGAATAGAACCATT+AGG | 0.431324 | 4.4:-35527967 | None:intergenic |
| ATCAGGAAGCCGCCCATCTC+TGG | 0.443990 | 4.4:-35537200 | None:intergenic |
| TCAACTTTGTTCCTGGAAGA+AGG | 0.444361 | 4.4:+35537080 | MS.gene057687:CDS |
| AAGATATTGTTGCACTGTCT+GGG | 0.448168 | 4.4:+35537464 | MS.gene057687:CDS |
| GGAGCAGTTGCCTTTGAGCT+TGG | 0.449217 | 4.4:-35538614 | None:intergenic |
| TGATTCAGGTGGCACGATGC+TGG | 0.451069 | 4.4:+35527913 | MS.gene057687:intron |
| ACCAAGACCGGTGGACCTAA+TGG | 0.457462 | 4.4:+35527952 | MS.gene057687:CDS |
| TCCAATAAAGCCCTGTCTGT+TGG | 0.463470 | 4.4:-35537864 | None:intergenic |
| GCCAGTACGGTTGCATCCAC+AGG | 0.465545 | 4.4:-35538635 | None:intergenic |
| AACACACCTTGTTTAGCATC+AGG | 0.470481 | 4.4:-35537217 | None:intergenic |
| TGCTTAAACTTCCAACAGAC+AGG | 0.474376 | 4.4:+35537853 | MS.gene057687:CDS |
| AGAGCACATCCAGAGAGATC+CGG | 0.490027 | 4.4:+35537581 | MS.gene057687:CDS |
| GATCCGGGTTTGATGGCCCT+TGG | 0.490119 | 4.4:+35537597 | MS.gene057687:CDS |
| GCCGCTGCAGTGGTGATCCT+CGG | 0.490613 | 4.4:+35538683 | MS.gene057687:CDS |
| TCAAAAGTATGTACCAGAGA+TGG | 0.493165 | 4.4:+35537187 | MS.gene057687:CDS |
| TCCTGTGGATGCAACCGTAC+TGG | 0.493313 | 4.4:+35538634 | MS.gene057687:CDS |
| GTGGACCTAATGGTTCTATT+CGG | 0.494846 | 4.4:+35527962 | MS.gene057687:CDS |
| CTCAAAGGCAACTGCTCCTG+TGG | 0.511925 | 4.4:+35538619 | MS.gene057687:CDS |
| TTCAGAGGGTCCTCTGTCCA+AGG | 0.512263 | 4.4:-35537614 | None:intergenic |
| GTTTGATGGCCCTTGGACAG+AGG | 0.519241 | 4.4:+35537604 | MS.gene057687:CDS |
| GAGCACATCCAGAGAGATCC+GGG | 0.520069 | 4.4:+35537582 | MS.gene057687:CDS |
| TGCGGGTGTTGTTGCAGTTG+AGG | 0.524490 | 4.4:+35537039 | MS.gene057687:CDS |
| TTGTATGAAACTCACAAAAG+AGG | 0.531958 | 4.4:+35538710 | MS.gene057687:CDS |
| TGTCCAAGGGCCATCAAACC+CGG | 0.543652 | 4.4:-35537600 | None:intergenic |
| CAACTTTGTTCCTGGAAGAA+GGG | 0.545120 | 4.4:+35537081 | MS.gene057687:CDS |
| CAAAAGTATGTACCAGAGAT+GGG | 0.549843 | 4.4:+35537188 | MS.gene057687:CDS |
| CTCTGTTGGCGATGAGAGCA+CGG | 0.550738 | 4.4:-35527749 | None:intergenic |
| TGTATGAAACTCACAAAAGA+GGG | 0.552331 | 4.4:+35538711 | MS.gene057687:CDS |
| TATGAGTTATCAAACTTCAG+AGG | 0.559558 | 4.4:-35537629 | None:intergenic |
| TGGCTTTGCACCAAGCTCAA+AGG | 0.560692 | 4.4:+35538604 | MS.gene057687:CDS |
| AAAAGCGCTTTGTGCCAGTA+CGG | 0.571570 | 4.4:-35538648 | None:intergenic |
| GTTAACAATGGAGTATCTCA+AGG | 0.574436 | 4.4:+35527701 | None:intergenic |
| CGGCTTCCTGATGCTAAACA+AGG | 0.575592 | 4.4:+35537211 | MS.gene057687:CDS |
| GAGGGGAGCACAGTCTCTGT+TGG | 0.588793 | 4.4:-35527763 | None:intergenic |
| TATGATGCAAAGACCAAGAC+CGG | 0.589691 | 4.4:+35527940 | MS.gene057687:CDS |
| AATAGAACCATTAGGTCCAC+CGG | 0.593542 | 4.4:-35527959 | None:intergenic |
| TACGCTAAGCGAAGCATGAG+GGG | 0.595394 | 4.4:-35527780 | None:intergenic |
| ATGAGTTATCAAACTTCAGA+GGG | 0.599283 | 4.4:-35537628 | None:intergenic |
| ACTGTCTGGGGCACATACGC+TGG | 0.608033 | 4.4:+35537477 | MS.gene057687:CDS |
| CCATACGATAAAAGATATCA+CGG | 0.612766 | 4.4:-35537429 | None:intergenic |
| TCGCATACAGCTCAACATAA+CGG | 0.615688 | 4.4:-35537902 | None:intergenic |
| TTACGCTAAGCGAAGCATGA+GGG | 0.621813 | 4.4:-35527781 | None:intergenic |
| TCAGAGGGTCCTCTGTCCAA+GGG | 0.622882 | 4.4:-35537613 | None:intergenic |
| CCAGGAACAAAGTTGACTGT+GGG | 0.625811 | 4.4:-35537073 | None:intergenic |
| ACCGAGGATCACCACTGCAG+CGG | 0.626779 | 4.4:-35538684 | None:intergenic |
| TCCAGGAACAAAGTTGACTG+TGG | 0.628167 | 4.4:-35537074 | None:intergenic |
| TTTACGCTAAGCGAAGCATG+AGG | 0.634481 | 4.4:-35527782 | None:intergenic |
| AGATATTGTTGCACTGTCTG+GGG | 0.639389 | 4.4:+35537465 | MS.gene057687:CDS |
| TTATGTTGAGCTGTATGCGA+AGG | 0.641815 | 4.4:+35537905 | MS.gene057687:CDS |
| TGTTGCAGTTGAGGTTACTG+GGG | 0.642422 | 4.4:+35537048 | MS.gene057687:CDS |
| AGTTGTAGCTGCCGCTGCAG+TGG | 0.652303 | 4.4:+35538673 | MS.gene057687:CDS |
| GCTTAAACTTCCAACAGACA+GGG | 0.655046 | 4.4:+35537854 | MS.gene057687:CDS |
| GTTGCAGTTGAGGTTACTGG+GGG | 0.656351 | 4.4:+35537049 | MS.gene057687:CDS |
| TAATGGTTCTATTCGGAACG+AGG | 0.677025 | 4.4:+35527969 | MS.gene057687:CDS |
| GAGTTTCATACAAGTAACCG+AGG | 0.700364 | 4.4:-35538700 | None:intergenic |
| GATGCAAAGACCAAGACCGG+TGG | 0.716515 | 4.4:+35527943 | MS.gene057687:CDS |
| AAGTATGTACCAGAGATGGG+CGG | 0.726843 | 4.4:+35537191 | MS.gene057687:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 35527708 | 35538739 | 35527708 | ID=MS.gene057687 |
| chr4.4 | mRNA | 35527708 | 35538739 | 35527708 | ID=MS.gene057687.t1;Parent=MS.gene057687 |
| chr4.4 | exon | 35527708 | 35527799 | 35527708 | ID=MS.gene057687.t1.exon1;Parent=MS.gene057687.t1 |
| chr4.4 | CDS | 35527708 | 35527799 | 35527708 | ID=cds.MS.gene057687.t1;Parent=MS.gene057687.t1 |
| chr4.4 | exon | 35527921 | 35528006 | 35527921 | ID=MS.gene057687.t1.exon2;Parent=MS.gene057687.t1 |
| chr4.4 | CDS | 35527921 | 35528006 | 35527921 | ID=cds.MS.gene057687.t1;Parent=MS.gene057687.t1 |
| chr4.4 | exon | 35535577 | 35535626 | 35535577 | ID=MS.gene057687.t1.exon3;Parent=MS.gene057687.t1 |
| chr4.4 | CDS | 35535577 | 35535626 | 35535577 | ID=cds.MS.gene057687.t1;Parent=MS.gene057687.t1 |
| chr4.4 | exon | 35537037 | 35537102 | 35537037 | ID=MS.gene057687.t1.exon4;Parent=MS.gene057687.t1 |
| chr4.4 | CDS | 35537037 | 35537102 | 35537037 | ID=cds.MS.gene057687.t1;Parent=MS.gene057687.t1 |
| chr4.4 | exon | 35537184 | 35537232 | 35537184 | ID=MS.gene057687.t1.exon5;Parent=MS.gene057687.t1 |
| chr4.4 | CDS | 35537184 | 35537232 | 35537184 | ID=cds.MS.gene057687.t1;Parent=MS.gene057687.t1 |
| chr4.4 | exon | 35537416 | 35537498 | 35537416 | ID=MS.gene057687.t1.exon6;Parent=MS.gene057687.t1 |
| chr4.4 | CDS | 35537416 | 35537498 | 35537416 | ID=cds.MS.gene057687.t1;Parent=MS.gene057687.t1 |
| chr4.4 | exon | 35537578 | 35537657 | 35537578 | ID=MS.gene057687.t1.exon7;Parent=MS.gene057687.t1 |
| chr4.4 | CDS | 35537578 | 35537657 | 35537578 | ID=cds.MS.gene057687.t1;Parent=MS.gene057687.t1 |
| chr4.4 | exon | 35537824 | 35537926 | 35537824 | ID=MS.gene057687.t1.exon8;Parent=MS.gene057687.t1 |
| chr4.4 | CDS | 35537824 | 35537926 | 35537824 | ID=cds.MS.gene057687.t1;Parent=MS.gene057687.t1 |
| chr4.4 | exon | 35538548 | 35538739 | 35538548 | ID=MS.gene057687.t1.exon9;Parent=MS.gene057687.t1 |
| chr4.4 | CDS | 35538548 | 35538739 | 35538548 | ID=cds.MS.gene057687.t1;Parent=MS.gene057687.t1 |
| Gene Sequence |
| Protein sequence |
