Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063250.t1 | XP_013467035.1 | 97.8 | 324 | 7 | 0 | 1 | 324 | 1 | 324 | 1.70E-178 | 635.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063250.t1 | Q5XEP2 | 39.3 | 117 | 71 | 0 | 15 | 131 | 386 | 502 | 5.7e-18 | 93.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063250.t1 | A0A072VSG1 | 97.8 | 324 | 7 | 0 | 1 | 324 | 1 | 324 | 1.2e-178 | 635.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053122 | MS.gene063250 | 0.804481 | 2.12E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene059288 | MS.gene063250 | PPI |
| MS.gene05958 | MS.gene063250 | PPI |
| MS.gene05880 | MS.gene063250 | PPI |
| MS.gene35520 | MS.gene063250 | PPI |
| MS.gene015787 | MS.gene063250 | PPI |
| MS.gene049084 | MS.gene063250 | PPI |
| MS.gene034375 | MS.gene063250 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063250.t1 | MTR_1g041435 | 97.840 | 324 | 7 | 0 | 1 | 324 | 1 | 324 | 0.0 | 657 |
| MS.gene063250.t1 | MTR_1g041435 | 98.909 | 275 | 3 | 0 | 50 | 324 | 25 | 299 | 0.0 | 568 |
| MS.gene063250.t1 | MTR_5g012030 | 36.441 | 118 | 75 | 0 | 15 | 132 | 396 | 513 | 1.86e-19 | 89.4 |
| MS.gene063250.t1 | MTR_5g012030 | 36.364 | 99 | 63 | 0 | 15 | 113 | 6 | 104 | 1.01e-14 | 75.1 |
| MS.gene063250.t1 | MTR_7g115280 | 36.449 | 107 | 68 | 0 | 15 | 121 | 339 | 445 | 1.12e-15 | 77.8 |
| MS.gene063250.t1 | MTR_5g063200 | 30.252 | 119 | 79 | 1 | 1 | 119 | 438 | 552 | 2.54e-13 | 70.9 |
| MS.gene063250.t1 | MTR_3g452710 | 31.746 | 126 | 86 | 0 | 1 | 126 | 1 | 126 | 3.33e-13 | 70.5 |
| MS.gene063250.t1 | MTR_3g452710 | 31.746 | 126 | 86 | 0 | 1 | 126 | 1 | 126 | 3.46e-13 | 70.5 |
| MS.gene063250.t1 | MTR_2g078020 | 26.829 | 123 | 89 | 1 | 17 | 139 | 468 | 589 | 5.33e-13 | 70.1 |
| MS.gene063250.t1 | MTR_2g078020 | 26.829 | 123 | 89 | 1 | 17 | 139 | 468 | 589 | 6.31e-13 | 69.7 |
| MS.gene063250.t1 | MTR_3g087480 | 28.571 | 105 | 75 | 0 | 15 | 119 | 460 | 564 | 9.63e-13 | 69.3 |
| MS.gene063250.t1 | MTR_3g074230 | 27.049 | 122 | 88 | 1 | 18 | 139 | 431 | 551 | 6.40e-12 | 66.6 |
| MS.gene063250.t1 | MTR_3g074230 | 27.049 | 122 | 88 | 1 | 18 | 139 | 431 | 551 | 6.81e-12 | 66.6 |
| MS.gene063250.t1 | MTR_1g030300 | 31.538 | 130 | 87 | 2 | 13 | 140 | 183 | 312 | 6.43e-11 | 63.5 |
| MS.gene063250.t1 | MTR_5g009930 | 26.357 | 129 | 91 | 1 | 14 | 142 | 5 | 129 | 6.77e-11 | 62.8 |
| MS.gene063250.t1 | MTR_5g009930 | 26.357 | 129 | 91 | 1 | 14 | 142 | 5 | 129 | 8.79e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063250.t1 | AT1G04190 | 73.016 | 315 | 85 | 0 | 10 | 324 | 14 | 328 | 3.17e-180 | 501 |
| MS.gene063250.t1 | AT1G62740 | 38.983 | 118 | 72 | 0 | 15 | 132 | 386 | 503 | 5.64e-22 | 97.1 |
| MS.gene063250.t1 | AT1G62740 | 38.835 | 103 | 62 | 1 | 15 | 117 | 6 | 107 | 2.48e-14 | 73.9 |
| MS.gene063250.t1 | AT1G12270 | 36.441 | 118 | 75 | 0 | 15 | 132 | 387 | 504 | 2.61e-20 | 92.0 |
| MS.gene063250.t1 | AT1G12270 | 38.835 | 103 | 62 | 1 | 15 | 117 | 6 | 107 | 4.88e-13 | 70.1 |
| MS.gene063250.t1 | AT4G12400 | 37.288 | 118 | 74 | 0 | 15 | 132 | 373 | 490 | 1.15e-19 | 90.1 |
| MS.gene063250.t1 | AT4G12400 | 39.806 | 103 | 61 | 1 | 15 | 117 | 6 | 107 | 1.37e-16 | 80.9 |
| MS.gene063250.t1 | AT4G12400 | 37.288 | 118 | 74 | 0 | 15 | 132 | 373 | 490 | 1.39e-19 | 89.7 |
| MS.gene063250.t1 | AT4G12400 | 39.806 | 103 | 61 | 1 | 15 | 117 | 6 | 107 | 1.61e-16 | 80.5 |
| MS.gene063250.t1 | AT2G42810 | 33.871 | 124 | 81 | 1 | 3 | 126 | 6 | 128 | 3.76e-15 | 76.6 |
| MS.gene063250.t1 | AT2G42810 | 33.871 | 124 | 81 | 1 | 3 | 126 | 6 | 128 | 4.09e-15 | 76.3 |
| MS.gene063250.t1 | AT2G42810 | 33.871 | 124 | 81 | 1 | 3 | 126 | 6 | 128 | 4.23e-15 | 76.3 |
| MS.gene063250.t1 | AT2G42810 | 33.871 | 124 | 81 | 1 | 3 | 126 | 6 | 128 | 4.23e-15 | 76.3 |
| MS.gene063250.t1 | AT2G42810 | 33.871 | 124 | 81 | 1 | 3 | 126 | 6 | 128 | 4.23e-15 | 76.3 |
| MS.gene063250.t1 | AT3G04710 | 36.190 | 105 | 67 | 0 | 17 | 121 | 333 | 437 | 1.11e-14 | 74.7 |
| MS.gene063250.t1 | AT3G04710 | 36.190 | 105 | 67 | 0 | 17 | 121 | 334 | 438 | 1.16e-14 | 74.7 |
| MS.gene063250.t1 | AT3G04710 | 36.190 | 105 | 67 | 0 | 17 | 121 | 558 | 662 | 1.37e-14 | 75.1 |
| MS.gene063250.t1 | AT3G14950 | 31.967 | 122 | 81 | 2 | 14 | 133 | 261 | 382 | 1.05e-13 | 72.4 |
| MS.gene063250.t1 | AT1G78120 | 31.707 | 123 | 79 | 1 | 13 | 135 | 161 | 278 | 3.29e-13 | 70.5 |
| MS.gene063250.t1 | AT1G78120 | 26.415 | 106 | 78 | 0 | 18 | 123 | 401 | 506 | 6.85e-12 | 66.6 |
| MS.gene063250.t1 | AT5G10090 | 27.193 | 114 | 82 | 1 | 15 | 127 | 475 | 588 | 3.34e-13 | 70.5 |
| MS.gene063250.t1 | AT1G78120 | 31.707 | 123 | 79 | 1 | 13 | 135 | 161 | 278 | 3.64e-13 | 70.5 |
| MS.gene063250.t1 | AT5G65160 | 28.070 | 114 | 81 | 1 | 17 | 129 | 476 | 589 | 4.89e-13 | 70.1 |
| MS.gene063250.t1 | AT3G58620 | 24.648 | 142 | 107 | 0 | 15 | 156 | 453 | 594 | 1.03e-12 | 69.3 |
| MS.gene063250.t1 | AT3G58620 | 24.648 | 142 | 107 | 0 | 15 | 156 | 453 | 594 | 1.45e-12 | 68.9 |
| MS.gene063250.t1 | AT2G42580 | 27.143 | 140 | 98 | 2 | 15 | 152 | 462 | 599 | 5.66e-12 | 67.0 |
| MS.gene063250.t1 | AT1G53300 | 26.613 | 124 | 90 | 1 | 15 | 138 | 469 | 591 | 1.69e-11 | 65.5 |
| MS.gene063250.t1 | AT4G08320 | 30.075 | 133 | 92 | 1 | 2 | 133 | 166 | 298 | 1.71e-11 | 65.1 |
Find 57 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCAGGGATCCAGAAATTT+TGG | 0.181636 | 1.3:-24636680 | MS.gene063250:intron |
| AAACAGCTGCTGTGTGTTTC+TGG | 0.204324 | 1.3:+24637730 | None:intergenic |
| GCGCCAACGTCCAAAATTTC+TGG | 0.288254 | 1.3:+24636670 | None:intergenic |
| ACAATTGTACTAACCAATTC+AGG | 0.305169 | 1.3:+24639961 | None:intergenic |
| TTCAATACTTCTTGACTTTG+TGG | 0.320951 | 1.3:+24640090 | None:intergenic |
| TACATTTCCAGGGACATTTC+CGG | 0.326434 | 1.3:-24640500 | MS.gene063250:intron |
| ACCTTATCAATATTCACAAT+TGG | 0.335540 | 1.3:+24637958 | None:intergenic |
| CCTTATCAATATTCACAATT+GGG | 0.352170 | 1.3:+24637959 | None:intergenic |
| TTTCCGGAAGGGATGCATAT+TGG | 0.353524 | 1.3:-24640484 | MS.gene063250:CDS |
| GCTTCCATTTCCTTGATCCT+TGG | 0.353756 | 1.3:+24636918 | None:intergenic |
| GCTTGCTATCTTTAACTAGT+TGG | 0.355732 | 1.3:+24640049 | None:intergenic |
| TCAATACTTCTTGACTTTGT+GGG | 0.357106 | 1.3:+24640091 | None:intergenic |
| CTCTTGCAGTCTGAAAAGTA+TGG | 0.358770 | 1.3:-24638126 | MS.gene063250:intron |
| AGTTTACTTTCTTCCTGATA+AGG | 0.380004 | 1.3:-24638007 | MS.gene063250:CDS |
| CTCAAGAGCAGCCTGCTTAG+TGG | 0.383994 | 1.3:-24637674 | MS.gene063250:CDS |
| AGATACACTGAAGCCTGAAT+TGG | 0.385448 | 1.3:-24639974 | MS.gene063250:intron |
| TCAGTCAAGTACATTAAGAT+TGG | 0.390706 | 1.3:+24636608 | None:intergenic |
| TACATCATCATATCGTTTCA+TGG | 0.396873 | 1.3:+24640458 | None:intergenic |
| TATTCCCAGTTCAAATGAAA+AGG | 0.399079 | 1.3:-24636834 | MS.gene063250:CDS |
| CTTCAGTGTATCTAAATGTT+TGG | 0.401626 | 1.3:+24639984 | None:intergenic |
| TGCTGCAGCATTGCTACAAT+TGG | 0.401785 | 1.3:-24640667 | MS.gene063250:CDS |
| TCAGCATACTGCCTAAGAAA+TGG | 0.415722 | 1.3:+24637706 | None:intergenic |
| CCTCCAATATGCATCCCTTC+CGG | 0.435592 | 1.3:+24640481 | None:intergenic |
| CTATACTCAAGCCATCAAAA+AGG | 0.441533 | 1.3:-24642682 | MS.gene063250:CDS |
| AAGCTCTGAGATGTCTTTGA+AGG | 0.455578 | 1.3:-24642757 | MS.gene063250:CDS |
| CCCAATTGTGAATATTGATA+AGG | 0.468621 | 1.3:-24637959 | MS.gene063250:intron |
| AATTAAATTAAAACCCGAAT+GGG | 0.475131 | 1.3:-24640607 | MS.gene063250:CDS |
| ATTCCCAGTTCAAATGAAAA+GGG | 0.487057 | 1.3:-24636833 | MS.gene063250:CDS |
| TCTGGAAAGGCCAAGGATCA+AGG | 0.487214 | 1.3:-24636928 | MS.gene063250:CDS |
| CTCCTTCCGTGCGAAAATTG+TGG | 0.490264 | 1.3:-24636859 | MS.gene063250:CDS |
| AAGGCCAAGGATCAAGGAAA+TGG | 0.491879 | 1.3:-24636922 | MS.gene063250:CDS |
| AGTATGGATCTGAAGAAAGC+TGG | 0.495429 | 1.3:-24638110 | MS.gene063250:CDS |
| GTGTGTTTCTGGTGACTCAA+AGG | 0.501172 | 1.3:+24637741 | None:intergenic |
| ATTAAAACCCGAATGGGAAA+AGG | 0.501785 | 1.3:-24640601 | MS.gene063250:intron |
| CAGTCAAGTACATTAAGATT+GGG | 0.505176 | 1.3:+24636609 | None:intergenic |
| GAGATGTCTTTGAAGGATCA+AGG | 0.536135 | 1.3:-24642750 | MS.gene063250:CDS |
| TGGAAGCATGCACAGAATGA+TGG | 0.537108 | 1.3:-24636902 | MS.gene063250:CDS |
| TGGAGACTGCTGTAAAATCA+TGG | 0.542267 | 1.3:-24638056 | MS.gene063250:CDS |
| CTTATCAATATTCACAATTG+GGG | 0.543694 | 1.3:+24637960 | None:intergenic |
| AGCTATCTGAAAGGAAGCTA+AGG | 0.545730 | 1.3:+24640125 | None:intergenic |
| CTCATTCCTCGTCGAGACCA+TGG | 0.548485 | 1.3:-24638076 | MS.gene063250:CDS |
| CCGGAAGGGATGCATATTGG+AGG | 0.551327 | 1.3:-24640481 | MS.gene063250:CDS |
| TGTGTCTGCCAGGTCTGGAA+AGG | 0.560424 | 1.3:-24636941 | MS.gene063250:intron |
| AAACATCATTGCTTATCCAC+AGG | 0.566500 | 1.3:-24637644 | MS.gene063250:intron |
| TAGCAAGCGAGCTCAAGAAG+TGG | 0.567037 | 1.3:-24640034 | MS.gene063250:CDS |
| TGCCAGGTCTGGAAAGGCCA+AGG | 0.570453 | 1.3:-24636935 | MS.gene063250:intron |
| TTCCAGGGACATTTCCGGAA+GGG | 0.572993 | 1.3:-24640495 | MS.gene063250:intron |
| CAATTAAATTAAAACCCGAA+TGG | 0.579725 | 1.3:-24640608 | MS.gene063250:CDS |
| AAAAGGGACAGATACTGTGC+AGG | 0.590409 | 1.3:-24636817 | MS.gene063250:intron |
| ATGGCATGAAACTTCTTCAG+TGG | 0.598632 | 1.3:-24638037 | MS.gene063250:CDS |
| ATTTCTTAGGCAGTATGCTG+AGG | 0.604049 | 1.3:-24637704 | MS.gene063250:CDS |
| TCAAGTACATTAAGATTGGG+AGG | 0.637826 | 1.3:+24636612 | None:intergenic |
| TATGAGATCGAATGTTGACA+TGG | 0.643506 | 1.3:-24640007 | MS.gene063250:CDS |
| TTATCAATATTCACAATTGG+GGG | 0.644295 | 1.3:+24637961 | None:intergenic |
| ATACTGCGAAGCTATCTGAA+AGG | 0.645570 | 1.3:+24640116 | None:intergenic |
| TTTCCAGGGACATTTCCGGA+AGG | 0.651002 | 1.3:-24640496 | MS.gene063250:intron |
| CAGTCTCCATGGTCTCGACG+AGG | 0.701435 | 1.3:+24638070 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAGATATGTATAAAT+AGG | - | chr1.3:24641873-24641892 | MS.gene063250:intron | 10.0% |
| !!! | ATTGAAAAATGTATTTTTAA+GGG | + | chr1.3:24638868-24638887 | None:intergenic | 10.0% |
| !! | AAAAATTATTCAAAAACTAG+AGG | + | chr1.3:24639690-24639709 | None:intergenic | 15.0% |
| !! | AAATAAATTGTATTATAGTG+TGG | + | chr1.3:24640265-24640284 | None:intergenic | 15.0% |
| !! | AAGGAATTTGAAAAATTAAT+AGG | + | chr1.3:24641478-24641497 | None:intergenic | 15.0% |
| !! | AATTAGAATGTTTCTTTAAA+AGG | + | chr1.3:24640212-24640231 | None:intergenic | 15.0% |
| !! | AATTTGAAAGAAAAAAGAAA+AGG | + | chr1.3:24636778-24636797 | None:intergenic | 15.0% |
| !! | ATTAAAGAAATTAACATAGA+AGG | + | chr1.3:24639821-24639840 | None:intergenic | 15.0% |
| !! | ATTGACAATTATAATAATAG+TGG | + | chr1.3:24638578-24638597 | None:intergenic | 15.0% |
| !! | ATTTGAAAGAAAAAAGAAAA+GGG | + | chr1.3:24636777-24636796 | None:intergenic | 15.0% |
| !! | TGGTAATCTTTATATAATTT+GGG | + | chr1.3:24640048-24640067 | None:intergenic | 15.0% |
| !!! | AAAAGAAAGTATAAATCAAA+AGG | + | chr1.3:24642029-24642048 | None:intergenic | 15.0% |
| !!! | ATTTTGTAACTTTTTTCATT+TGG | - | chr1.3:24636795-24636814 | MS.gene063250:intron | 15.0% |
| !!! | CATTGAAAAATGTATTTTTA+AGG | + | chr1.3:24638869-24638888 | None:intergenic | 15.0% |
| !!! | TAGTGTTTTTATTATAGTTT+CGG | - | chr1.3:24636970-24636989 | MS.gene063250:intron | 15.0% |
| !!! | TTATTTTAGACTATTGAATA+GGG | + | chr1.3:24639758-24639777 | None:intergenic | 15.0% |
| !!! | TTCAATAGTCTAAAATAAAA+CGG | - | chr1.3:24639760-24639779 | MS.gene063250:intron | 15.0% |
| !!! | TTTATTTTAGACTATTGAAT+AGG | + | chr1.3:24639759-24639778 | None:intergenic | 15.0% |
| !!! | TTTTATTCTATCTTTTCTTA+TGG | - | chr1.3:24637180-24637199 | MS.gene063250:intron | 15.0% |
| !!! | TTTTGTAACTTTTTTCATTT+GGG | - | chr1.3:24636796-24636815 | MS.gene063250:intron | 15.0% |
| !! | AATTAAATTAAAACCCGAAT+GGG | - | chr1.3:24638794-24638813 | MS.gene063250:intron | 20.0% |
| !! | AGCATAAGATATTTATGAAT+TGG | + | chr1.3:24638676-24638695 | None:intergenic | 20.0% |
| !! | ATATAGGATATGATATGTTT+AGG | + | chr1.3:24639966-24639985 | None:intergenic | 20.0% |
| !! | ATATTGAAGAAGATAAAGAA+AGG | + | chr1.3:24641497-24641516 | None:intergenic | 20.0% |
| !! | ATTTATATGATAAACACTTG+GGG | - | chr1.3:24637221-24637240 | MS.gene063250:intron | 20.0% |
| !! | ATTTCCTTTACAAGTTATAT+AGG | - | chr1.3:24638440-24638459 | MS.gene063250:intron | 20.0% |
| !! | CAATAACTAAAAAATTTAGC+AGG | + | chr1.3:24639221-24639240 | None:intergenic | 20.0% |
| !! | CATTTATATGATAAACACTT+GGG | - | chr1.3:24637220-24637239 | MS.gene063250:intron | 20.0% |
| !! | GCATAAGATATTTATGAATT+GGG | + | chr1.3:24638675-24638694 | None:intergenic | 20.0% |
| !! | GTGGTAATCTTTATATAATT+TGG | + | chr1.3:24640049-24640068 | None:intergenic | 20.0% |
| !! | TAAAATCATAATACCATACA+GGG | + | chr1.3:24641613-24641632 | None:intergenic | 20.0% |
| !! | TAAAGATATGTATAAATAGG+AGG | - | chr1.3:24641876-24641895 | MS.gene063250:intron | 20.0% |
| !! | TAGGGAAAATATTAGTTAAT+GGG | - | chr1.3:24641848-24641867 | MS.gene063250:intron | 20.0% |
| !! | TATTTATTTGATACGAGTAT+CGG | + | chr1.3:24640024-24640043 | None:intergenic | 20.0% |
| !! | TCTTAGTTCATTAATTATGA+AGG | - | chr1.3:24641792-24641811 | MS.gene063250:intron | 20.0% |
| !! | TTAAAATCATAATACCATAC+AGG | + | chr1.3:24641614-24641633 | None:intergenic | 20.0% |
| !! | TTAGGGAAAATATTAGTTAA+TGG | - | chr1.3:24641847-24641866 | MS.gene063250:intron | 20.0% |
| !! | TTATAGCATAAGTAAATGTT+TGG | + | chr1.3:24637754-24637773 | None:intergenic | 20.0% |
| !! | TTTGTACTAAATACATATCT+CGG | + | chr1.3:24639088-24639107 | None:intergenic | 20.0% |
| !!! | AATCAATTTGGTTTTATACT+CGG | + | chr1.3:24640147-24640166 | None:intergenic | 20.0% |
| !!! | AGAAAATTCATTTTATGTAC+TGG | - | chr1.3:24637981-24638000 | MS.gene063250:CDS | 20.0% |
| !!! | GAAAATTCATTTTATGTACT+GGG | - | chr1.3:24637982-24638001 | MS.gene063250:CDS | 20.0% |
| !!! | TATTTTTTTAGCAAATTGAG+TGG | - | chr1.3:24638600-24638619 | MS.gene063250:intron | 20.0% |
| !!! | TGTATTTTGAATGGAAATAA+TGG | + | chr1.3:24642209-24642228 | None:intergenic | 20.0% |
| ! | AAAAAAATAGTGAGAATCAG+AGG | + | chr1.3:24642095-24642114 | None:intergenic | 25.0% |
| ! | AAAAAATAGTGAGAATCAGA+GGG | + | chr1.3:24642094-24642113 | None:intergenic | 25.0% |
| ! | AAAACTACGGATAATCAATT+TGG | + | chr1.3:24640159-24640178 | None:intergenic | 25.0% |
| ! | AAATAAGTGCATCCAAAAAA+GGG | + | chr1.3:24642621-24642640 | None:intergenic | 25.0% |
| ! | AAGAAAAAGAAGACATTGAT+AGG | + | chr1.3:24639787-24639806 | None:intergenic | 25.0% |
| ! | AAGGTAAAGTGATTTATGAT+TGG | + | chr1.3:24637661-24637680 | None:intergenic | 25.0% |
| ! | AAGTTATCATAGATAGCTTA+TGG | + | chr1.3:24637123-24637142 | None:intergenic | 25.0% |
| ! | AATTACCAAACAAATAGCTT+AGG | - | chr1.3:24640774-24640793 | MS.gene063250:intron | 25.0% |
| ! | ACCTTATCAATATTCACAAT+TGG | + | chr1.3:24641446-24641465 | None:intergenic | 25.0% |
| ! | AGCATTAATTGTTGAATTTG+GGG | + | chr1.3:24641063-24641082 | None:intergenic | 25.0% |
| ! | AGTAAATGGAGTATACAATT+TGG | + | chr1.3:24642138-24642157 | None:intergenic | 25.0% |
| ! | ATAAATAAGCCAATCAAAAC+AGG | - | chr1.3:24637422-24637441 | MS.gene063250:intron | 25.0% |
| ! | ATAGGATAAAGAGTTAGTTA+GGG | - | chr1.3:24641830-24641849 | MS.gene063250:intron | 25.0% |
| ! | ATATAAAGATTACCACTATG+TGG | - | chr1.3:24640053-24640072 | MS.gene063250:CDS | 25.0% |
| ! | ATTGTATTATAGTGTGGATT+AGG | + | chr1.3:24640259-24640278 | None:intergenic | 25.0% |
| ! | CAATTAAATTAAAACCCGAA+TGG | - | chr1.3:24638793-24638812 | MS.gene063250:intron | 25.0% |
| ! | CCAAGTACAAAATTCATAAA+AGG | + | chr1.3:24640678-24640697 | None:intergenic | 25.0% |
| ! | CCTTATCAATATTCACAATT+GGG | + | chr1.3:24641445-24641464 | None:intergenic | 25.0% |
| ! | CGTCATTTCTTAGAAAATAT+AGG | + | chr1.3:24639982-24640001 | None:intergenic | 25.0% |
| ! | CTAAATATACTTGCACATTT+GGG | - | chr1.3:24641538-24641557 | MS.gene063250:intron | 25.0% |
| ! | CTTATCAATATTCACAATTG+GGG | + | chr1.3:24641444-24641463 | None:intergenic | 25.0% |
| ! | GAGCATTAATTGTTGAATTT+GGG | + | chr1.3:24641064-24641083 | None:intergenic | 25.0% |
| ! | GAGTTATTTGTATGACAAAA+AGG | - | chr1.3:24640993-24641012 | MS.gene063250:intron | 25.0% |
| ! | GCATTTATATGATAAACACT+TGG | - | chr1.3:24637219-24637238 | MS.gene063250:intron | 25.0% |
| ! | TAAATAAGTGCATCCAAAAA+AGG | + | chr1.3:24642622-24642641 | None:intergenic | 25.0% |
| ! | TATAAAGATTACCACTATGT+GGG | - | chr1.3:24640054-24640073 | MS.gene063250:CDS | 25.0% |
| ! | TATAGGATAAAGAGTTAGTT+AGG | - | chr1.3:24641829-24641848 | MS.gene063250:intron | 25.0% |
| ! | TATTATTGATAAGCTTGTCA+AGG | - | chr1.3:24637296-24637315 | MS.gene063250:intron | 25.0% |
| ! | TATTCAAAAACTAGAGGTTT+CGG | + | chr1.3:24639684-24639703 | None:intergenic | 25.0% |
| ! | TCACAAAATTTCATATGTGT+CGG | + | chr1.3:24639551-24639570 | None:intergenic | 25.0% |
| ! | TCTAAATATACTTGCACATT+TGG | - | chr1.3:24641537-24641556 | MS.gene063250:intron | 25.0% |
| ! | TGAAAAAGAAACCAAAACTA+CGG | + | chr1.3:24640172-24640191 | None:intergenic | 25.0% |
| ! | TGATCAAAAGTTAAGAGAAA+AGG | + | chr1.3:24638993-24639012 | None:intergenic | 25.0% |
| ! | TGGATAAATTCATGTAAAAG+TGG | + | chr1.3:24637641-24637660 | None:intergenic | 25.0% |
| ! | TTACTCACTTAACAAAGTAA+CGG | - | chr1.3:24640534-24640553 | MS.gene063250:intron | 25.0% |
| ! | TTATCAATATTCACAATTGG+GGG | + | chr1.3:24641443-24641462 | None:intergenic | 25.0% |
| !! | AAATTGATTATCCGTAGTTT+TGG | - | chr1.3:24640158-24640177 | MS.gene063250:intron | 25.0% |
| !! | AGAGCATTAATTGTTGAATT+TGG | + | chr1.3:24641065-24641084 | None:intergenic | 25.0% |
| !! | ATATGAAATTTTGTGAAGCA+CGG | - | chr1.3:24639555-24639574 | MS.gene063250:intron | 25.0% |
| !! | CCTTTTATGAATTTTGTACT+TGG | - | chr1.3:24640675-24640694 | MS.gene063250:CDS | 25.0% |
| !! | GATTTATACTTTCTTTTCCA+TGG | - | chr1.3:24642032-24642051 | MS.gene063250:intron | 25.0% |
| !! | TAACTTGTAAAGGAAATGAA+AGG | + | chr1.3:24638437-24638456 | None:intergenic | 25.0% |
| !! | TAACTTTTGTGTGTGATTTT+TGG | + | chr1.3:24640870-24640889 | None:intergenic | 25.0% |
| !! | TCTCATTACTTTCTGTATTT+TGG | - | chr1.3:24641131-24641150 | MS.gene063250:intron | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | - | chr1.3:24637502-24637521 | MS.gene063250:intron | 25.0% |
| !!! | TAAGTAAATGTTTGGTTTTG+CGG | + | chr1.3:24637746-24637765 | None:intergenic | 25.0% |
| !!! | TGTATGTTTGGTTTCAATTT+TGG | - | chr1.3:24637452-24637471 | MS.gene063250:intron | 25.0% |
| !!! | TGTCTTTAGAATTTTCGTTA+GGG | - | chr1.3:24642273-24642292 | MS.gene063250:intron | 25.0% |
| !!! | TTGTCTTTAGAATTTTCGTT+AGG | - | chr1.3:24642272-24642291 | MS.gene063250:intron | 25.0% |
| !!! | TTTCTGACATTTTGTTTTTC+AGG | + | chr1.3:24641107-24641126 | None:intergenic | 25.0% |
| !!! | TTTTCTAAGAAATGACGTAT+CGG | - | chr1.3:24639985-24640004 | MS.gene063250:CDS | 25.0% |
| AAAGTACAAGAAAAATAGCC+CGG | - | chr1.3:24638172-24638191 | MS.gene063250:intron | 30.0% | |
| AACACATTCAAAACTGAACA+GGG | - | chr1.3:24641027-24641046 | MS.gene063250:intron | 30.0% | |
| AAGAAATCAAAAGTTACCTG+TGG | + | chr1.3:24641776-24641795 | None:intergenic | 30.0% | |
| AATGATATGAGTAGACAGAT+AGG | + | chr1.3:24641220-24641239 | None:intergenic | 30.0% | |
| AATGCTCTTAATCTAATCCA+AGG | - | chr1.3:24640929-24640948 | MS.gene063250:intron | 30.0% | |
| ACAAAAAGCAAGGTTGTTTA+AGG | - | chr1.3:24640481-24640500 | MS.gene063250:CDS | 30.0% | |
| ACAAAATCTACTAATCTGCA+AGG | + | chr1.3:24637895-24637914 | None:intergenic | 30.0% | |
| ACAAAATTCATAAAAGGAGC+CGG | + | chr1.3:24640672-24640691 | None:intergenic | 30.0% | |
| ACAATTGTACTAACCAATTC+AGG | + | chr1.3:24639443-24639462 | None:intergenic | 30.0% | |
| ACTATAGTGCTATAGAATAG+CGG | - | chr1.3:24639041-24639060 | MS.gene063250:intron | 30.0% | |
| ACTCCATTTACTTTGACAAA+TGG | - | chr1.3:24642146-24642165 | MS.gene063250:intron | 30.0% | |
| AGGAACCAATAAGAATTGAT+CGG | + | chr1.3:24642311-24642330 | None:intergenic | 30.0% | |
| AGTCAAATACAACATGAAAG+TGG | + | chr1.3:24638542-24638561 | None:intergenic | 30.0% | |
| AGTTTACTTTCTTCCTGATA+AGG | - | chr1.3:24641394-24641413 | MS.gene063250:intron | 30.0% | |
| ATTCCCAGTTCAAATGAAAA+GGG | - | chr1.3:24642568-24642587 | MS.gene063250:intron | 30.0% | |
| ATTGGTTAGTACAATTGTTC+TGG | - | chr1.3:24639445-24639464 | MS.gene063250:intron | 30.0% | |
| ATTTACTTTGACAAATGGAG+AGG | - | chr1.3:24642151-24642170 | MS.gene063250:intron | 30.0% | |
| CCCAATTGTGAATATTGATA+AGG | - | chr1.3:24641442-24641461 | MS.gene063250:intron | 30.0% | |
| CTTAAAATAAGGTTCTGTCT+GGG | - | chr1.3:24640801-24640820 | MS.gene063250:intron | 30.0% | |
| CTTCAGTGTATCTAAATGTT+TGG | + | chr1.3:24639420-24639439 | None:intergenic | 30.0% | |
| GCTAGAAGCTAATTCAAAAT+AGG | + | chr1.3:24637920-24637939 | None:intergenic | 30.0% | |
| GCTTAATTAAGTAGGAAAAG+TGG | - | chr1.3:24637828-24637847 | MS.gene063250:intron | 30.0% | |
| GCTTAGGAACTCTTAAAATA+AGG | - | chr1.3:24640790-24640809 | MS.gene063250:intron | 30.0% | |
| GGATTGAACAATAAAACTCA+AGG | + | chr1.3:24637620-24637639 | None:intergenic | 30.0% | |
| GTGGTTAATCAATATTGACA+TGG | + | chr1.3:24638523-24638542 | None:intergenic | 30.0% | |
| TACATCATCATATCGTTTCA+TGG | + | chr1.3:24638946-24638965 | None:intergenic | 30.0% | |
| TAGCAAAAACACAAAAAGCA+AGG | - | chr1.3:24640471-24640490 | MS.gene063250:CDS | 30.0% | |
| TATCAATAGAGTAGTTGAAG+AGG | + | chr1.3:24639723-24639742 | None:intergenic | 30.0% | |
| TATTCCCAGTTCAAATGAAA+AGG | - | chr1.3:24642567-24642586 | MS.gene063250:intron | 30.0% | |
| TCAAAATACAAGTTCTGTGA+AGG | - | chr1.3:24642219-24642238 | MS.gene063250:intron | 30.0% | |
| TCAATACTTCTTGACTTTGT+GGG | + | chr1.3:24639313-24639332 | None:intergenic | 30.0% | |
| TCTCCATTTGTCAAAGTAAA+TGG | + | chr1.3:24642152-24642171 | None:intergenic | 30.0% | |
| TCTTAAAATAAGGTTCTGTC+TGG | - | chr1.3:24640800-24640819 | MS.gene063250:intron | 30.0% | |
| TGAAACCAAACATACACTAA+GGG | + | chr1.3:24637448-24637467 | None:intergenic | 30.0% | |
| TGATCTTGTAAAATTGAGTC+CGG | + | chr1.3:24637698-24637717 | None:intergenic | 30.0% | |
| TGGATTGTGATGAAATATGA+CGG | - | chr1.3:24638053-24638072 | MS.gene063250:CDS | 30.0% | |
| TGTCAAAATAGCGAATATAG+CGG | - | chr1.3:24639017-24639036 | MS.gene063250:intron | 30.0% | |
| TTAAAATAAGGTTCTGTCTG+GGG | - | chr1.3:24640802-24640821 | MS.gene063250:intron | 30.0% | |
| TTCAATACTTCTTGACTTTG+TGG | + | chr1.3:24639314-24639333 | None:intergenic | 30.0% | |
| TTCCATAAAAATCACTGTCA+CGG | - | chr1.3:24638361-24638380 | MS.gene063250:intron | 30.0% | |
| TTGAAACCAAACATACACTA+AGG | + | chr1.3:24637449-24637468 | None:intergenic | 30.0% | |
| TTGCTTGTGTGAATATTTGT+AGG | - | chr1.3:24639253-24639272 | MS.gene063250:intron | 30.0% | |
| TTTAACAACCCATGAAAGAA+TGG | + | chr1.3:24640296-24640315 | None:intergenic | 30.0% | |
| TTTAGCAAATTGAGTGGTTT+CGG | - | chr1.3:24638606-24638625 | MS.gene063250:intron | 30.0% | |
| TTTATATGCATGTTCTTTGC+TGG | - | chr1.3:24639853-24639872 | MS.gene063250:intron | 30.0% | |
| TTTCACTTGATTCAGTTGTT+GGG | - | chr1.3:24636826-24636845 | MS.gene063250:CDS | 30.0% | |
| ! | AAGCTAGAATTTGTAGGTTT+TGG | - | chr1.3:24637575-24637594 | MS.gene063250:intron | 30.0% |
| ! | AATAAACCACAATTTTCGCA+CGG | + | chr1.3:24642551-24642570 | None:intergenic | 30.0% |
| ! | AGGTGCTTGATTTGAATTTA+TGG | + | chr1.3:24640716-24640735 | None:intergenic | 30.0% |
| ! | CACTCCTATATAACTTGTAA+AGG | + | chr1.3:24638447-24638466 | None:intergenic | 30.0% |
| ! | GGTGCTTGATTTGAATTTAT+GGG | + | chr1.3:24640715-24640734 | None:intergenic | 30.0% |
| ! | GTCAATGTCTAGAATAATGT+TGG | - | chr1.3:24640443-24640462 | MS.gene063250:intron | 30.0% |
| ! | TAAAAAGTGTGGGATTTGAA+GGG | + | chr1.3:24636746-24636765 | None:intergenic | 30.0% |
| ! | TGGATAAGCAATGATGTTTT+TGG | + | chr1.3:24641756-24641775 | None:intergenic | 30.0% |
| ! | TTCTTTAAAAGGTGATTGAG+CGG | + | chr1.3:24640201-24640220 | None:intergenic | 30.0% |
| ! | TTTTAATAAAACCCGTATCC+CGG | - | chr1.3:24640650-24640669 | MS.gene063250:CDS | 30.0% |
| ! | TTTTCACTTGATTCAGTTGT+TGG | - | chr1.3:24636825-24636844 | MS.gene063250:CDS | 30.0% |
| !! | AATTCTTATTGGTTCCTCTA+AGG | - | chr1.3:24642314-24642333 | MS.gene063250:intron | 30.0% |
| !! | ATGTTTGGTTTCAATTTTGG+TGG | - | chr1.3:24637455-24637474 | MS.gene063250:intron | 30.0% |
| !! | CACAGAACTTGTATTTTGAA+TGG | + | chr1.3:24642218-24642237 | None:intergenic | 30.0% |
| !! | TGTTTGGTTTCAATTTTGGT+GGG | - | chr1.3:24637456-24637475 | MS.gene063250:intron | 30.0% |
| !! | TTATAGTGTGGATTAGGAAT+TGG | + | chr1.3:24640253-24640272 | None:intergenic | 30.0% |
| !!! | ATGTGCATGTCTTTTTTTAG+TGG | - | chr1.3:24642248-24642267 | MS.gene063250:intron | 30.0% |
| !!! | GGATACGGGTTTTATTAAAA+AGG | + | chr1.3:24640650-24640669 | None:intergenic | 30.0% |
| !!! | GGTTTTATTAAAAAGGTGCA+GGG | + | chr1.3:24640643-24640662 | None:intergenic | 30.0% |
| !!! | TGGCATTGTCATCTTATTTT+CGG | - | chr1.3:24638271-24638290 | MS.gene063250:intron | 30.0% |
| AAAATTGAGTCCGGCTAAAA+GGG | + | chr1.3:24637689-24637708 | None:intergenic | 35.0% | |
| AAACATCATTGCTTATCCAC+AGG | - | chr1.3:24641757-24641776 | MS.gene063250:intron | 35.0% | |
| AAACTCACATTGAAAGCTTC+CGG | - | chr1.3:24640352-24640371 | MS.gene063250:intron | 35.0% | |
| AATCAGAGGGATAAAAGAGA+AGG | + | chr1.3:24642081-24642100 | None:intergenic | 35.0% | |
| ACCAATAAGAATTGATCGGA+TGG | + | chr1.3:24642307-24642326 | None:intergenic | 35.0% | |
| ACGTATCATAACAGATACGT+TGG | - | chr1.3:24639622-24639641 | MS.gene063250:intron | 35.0% | |
| ACTCAATAAAGTTCCCTGTA+TGG | - | chr1.3:24641597-24641616 | MS.gene063250:intron | 35.0% | |
| ACTTGAGAACTCTTAAAGTG+AGG | + | chr1.3:24640736-24640755 | None:intergenic | 35.0% | |
| ATTAAAACCCGAATGGGAAA+AGG | - | chr1.3:24638800-24638819 | MS.gene063250:intron | 35.0% | |
| ATTATGAAGGTGAGTCTGTT+AGG | - | chr1.3:24641805-24641824 | MS.gene063250:intron | 35.0% | |
| CAAAATTCATAAAAGGAGCC+GGG | + | chr1.3:24640671-24640690 | None:intergenic | 35.0% | |
| CAACACATTCAAAACTGAAC+AGG | - | chr1.3:24641026-24641045 | MS.gene063250:intron | 35.0% | |
| CCAGTATATTCCCCAATAAT+CGG | + | chr1.3:24638036-24638055 | None:intergenic | 35.0% | |
| CCTATATTGTCTTCTGTAGA+AGG | + | chr1.3:24641995-24642014 | None:intergenic | 35.0% | |
| CCTTCTACAGAAGACAATAT+AGG | - | chr1.3:24641992-24642011 | MS.gene063250:intron | 35.0% | |
| CGTATCATAACAGATACGTT+GGG | - | chr1.3:24639623-24639642 | MS.gene063250:intron | 35.0% | |
| CTATACTCAAGCCATCAAAA+AGG | - | chr1.3:24636719-24636738 | MS.gene063250:intron | 35.0% | |
| GAGTTCCTAAGCTATTTGTT+TGG | + | chr1.3:24640782-24640801 | None:intergenic | 35.0% | |
| GGAATTCTCTCTTTAAACTC+CGG | + | chr1.3:24638406-24638425 | None:intergenic | 35.0% | |
| GGAGTTACGTATTTAAACTG+TGG | - | chr1.3:24638627-24638646 | MS.gene063250:intron | 35.0% | |
| TAAAATAAGGTTCTGTCTGG+GGG | - | chr1.3:24640803-24640822 | MS.gene063250:intron | 35.0% | |
| TAAAATTGAGTCCGGCTAAA+AGG | + | chr1.3:24637690-24637709 | None:intergenic | 35.0% | |
| TACGTGAAGCTAGAATTTGT+AGG | - | chr1.3:24637569-24637588 | MS.gene063250:intron | 35.0% | |
| TAGTAGAGAATCAGCATAAC+CGG | - | chr1.3:24638384-24638403 | MS.gene063250:intron | 35.0% | |
| TATGAGATCGAATGTTGACA+TGG | - | chr1.3:24639394-24639413 | MS.gene063250:intron | 35.0% | |
| TCCATCCGATCAATTCTTAT+TGG | - | chr1.3:24642303-24642322 | MS.gene063250:intron | 35.0% | |
| TCTGCTTGAATACATTTCCA+GGG | - | chr1.3:24638891-24638910 | MS.gene063250:intron | 35.0% | |
| TTCACACAAGCAAATGTATC+AGG | + | chr1.3:24639246-24639265 | None:intergenic | 35.0% | |
| TTCTGCTTGAATACATTTCC+AGG | - | chr1.3:24638890-24638909 | MS.gene063250:intron | 35.0% | |
| ! | AAGAGCTATTTGGTTTCGAA+AGG | + | chr1.3:24638216-24638235 | None:intergenic | 35.0% |
| ! | AAGCTTGAATGCCGATTATT+GGG | - | chr1.3:24638022-24638041 | MS.gene063250:CDS | 35.0% |
| ! | AGAGCTATTTGGTTTCGAAA+GGG | + | chr1.3:24638215-24638234 | None:intergenic | 35.0% |
| ! | AGATCTTACCTTTTCCCATT+CGG | + | chr1.3:24638811-24638830 | None:intergenic | 35.0% |
| ! | ATTATGTGGCTTTTGTCAGA+GGG | - | chr1.3:24640585-24640604 | MS.gene063250:intron | 35.0% |
| ! | ATTTGAAGGGTCCTTTTTGA+TGG | + | chr1.3:24636733-24636752 | None:intergenic | 35.0% |
| ! | CTAAAAAGTGTGGGATTTGA+AGG | + | chr1.3:24636747-24636766 | None:intergenic | 35.0% |
| ! | CTTTTGGATTTTAAACTCCC+CGG | - | chr1.3:24640403-24640422 | MS.gene063250:intron | 35.0% |
| ! | GCTAAAGCGCTTAATTAAGT+AGG | - | chr1.3:24637820-24637839 | MS.gene063250:intron | 35.0% |
| ! | GCTTGATTTGAATTTATGGG+AGG | + | chr1.3:24640712-24640731 | None:intergenic | 35.0% |
| ! | GGGAGTTTAAAATCCAAAAG+TGG | + | chr1.3:24640403-24640422 | None:intergenic | 35.0% |
| ! | TACCGTGACAGTGATTTTTA+TGG | + | chr1.3:24638366-24638385 | None:intergenic | 35.0% |
| ! | TGGCAAAAAGTAACCACTTT+TGG | - | chr1.3:24640387-24640406 | MS.gene063250:intron | 35.0% |
| ! | TGTATACCTTGCTATGTTCA+GGG | - | chr1.3:24642706-24642725 | MS.gene063250:CDS | 35.0% |
| ! | TGTCCCTTTTCATTTGAACT+GGG | + | chr1.3:24642574-24642593 | None:intergenic | 35.0% |
| ! | TTGTATACCTTGCTATGTTC+AGG | - | chr1.3:24642705-24642724 | MS.gene063250:CDS | 35.0% |
| ! | TTTGACTGAGTTGAGACTTA+CGG | - | chr1.3:24638317-24638336 | MS.gene063250:intron | 35.0% |
| ! | TTTGGGATAATCTTTCTCGT+TGG | - | chr1.3:24641555-24641574 | MS.gene063250:intron | 35.0% |
| !! | ACTGCTTTTGATTGGAAGTT+GGG | - | chr1.3:24639192-24639211 | MS.gene063250:intron | 35.0% |
| !! | CTTCAAATCCCACACTTTTT+AGG | - | chr1.3:24636745-24636764 | MS.gene063250:intron | 35.0% |
| !! | GCTTGCTATCTTTAACTAGT+TGG | + | chr1.3:24639355-24639374 | None:intergenic | 35.0% |
| !! | GTTTGGTTTCAATTTTGGTG+GGG | - | chr1.3:24637457-24637476 | MS.gene063250:intron | 35.0% |
| !! | TAATCTTTCTCGTTGGCTTA+TGG | - | chr1.3:24641562-24641581 | MS.gene063250:intron | 35.0% |
| !! | TTGACAACACTGCTTTTGAT+TGG | - | chr1.3:24639184-24639203 | MS.gene063250:intron | 35.0% |
| !!! | AAATCCCACACTTTTTAGGT+AGG | - | chr1.3:24636749-24636768 | MS.gene063250:intron | 35.0% |
| !!! | ACGTTGATTTTGATACTCTC+CGG | + | chr1.3:24640425-24640444 | None:intergenic | 35.0% |
| !!! | GGGTTTTATTAAAAAGGTGC+AGG | + | chr1.3:24640644-24640663 | None:intergenic | 35.0% |
| AAAAATACATGACCCATCCC+AGG | + | chr1.3:24642352-24642371 | None:intergenic | 40.0% | |
| AACAACCCATGAAAGAATGG+CGG | + | chr1.3:24640293-24640312 | None:intergenic | 40.0% | |
| AACTCACATTGAAAGCTTCC+GGG | - | chr1.3:24640353-24640372 | MS.gene063250:intron | 40.0% | |
| AAGCATAAAGCTAGCATCCA+TGG | + | chr1.3:24642052-24642071 | None:intergenic | 40.0% | |
| AAGTGATCGAAGGCTCTATT+TGG | + | chr1.3:24637798-24637817 | None:intergenic | 40.0% | |
| AAGTGCATCCAAAAAAGGGT+GGG | + | chr1.3:24642617-24642636 | None:intergenic | 40.0% | |
| AGAGGGATAAAAGAGAAGGA+AGG | + | chr1.3:24642077-24642096 | None:intergenic | 40.0% | |
| AGAGTTCTCAAGTGAAGAGT+TGG | - | chr1.3:24640743-24640762 | MS.gene063250:intron | 40.0% | |
| AGATACACTGAAGCCTGAAT+TGG | - | chr1.3:24639427-24639446 | MS.gene063250:intron | 40.0% | |
| AGATTACCACTATGTGGGAT+TGG | - | chr1.3:24640059-24640078 | MS.gene063250:CDS | 40.0% | |
| AGCCACATAATGATTTGACG+TGG | + | chr1.3:24640576-24640595 | None:intergenic | 40.0% | |
| AGCTATCTGAAAGGAAGCTA+AGG | + | chr1.3:24639279-24639298 | None:intergenic | 40.0% | |
| AGGTGAGTCTGTTAGGTTAT+AGG | - | chr1.3:24641812-24641831 | MS.gene063250:intron | 40.0% | |
| AGTATGGATCTGAAGAAAGC+TGG | - | chr1.3:24641291-24641310 | MS.gene063250:intron | 40.0% | |
| AGTTATTCAGATTGTGCGAG+AGG | - | chr1.3:24641914-24641933 | MS.gene063250:intron | 40.0% | |
| ATACTGCGAAGCTATCTGAA+AGG | + | chr1.3:24639288-24639307 | None:intergenic | 40.0% | |
| ATCTAACCAATCCCACATAG+TGG | + | chr1.3:24640068-24640087 | None:intergenic | 40.0% | |
| ATGGCATGAAACTTCTTCAG+TGG | - | chr1.3:24641364-24641383 | MS.gene063250:intron | 40.0% | |
| ATTTCTTAGGCAGTATGCTG+AGG | - | chr1.3:24641697-24641716 | MS.gene063250:intron | 40.0% | |
| CAATGCCATTGTTTAGCAGT+AGG | + | chr1.3:24638259-24638278 | None:intergenic | 40.0% | |
| CACATAATGATTTGACGTGG+TGG | + | chr1.3:24640573-24640592 | None:intergenic | 40.0% | |
| CACCACGTCAAATCATTATG+TGG | - | chr1.3:24640571-24640590 | MS.gene063250:intron | 40.0% | |
| CATGCTAGTTGAGCACTATT+AGG | + | chr1.3:24639478-24639497 | None:intergenic | 40.0% | |
| CCGATTATTGGGGAATATAC+TGG | - | chr1.3:24638033-24638052 | MS.gene063250:CDS | 40.0% | |
| CTCTTGCAGTCTGAAAAGTA+TGG | - | chr1.3:24641275-24641294 | MS.gene063250:intron | 40.0% | |
| CTGCAAAGCAAAGAGCTATT+TGG | + | chr1.3:24638226-24638245 | None:intergenic | 40.0% | |
| GACCCACATCGTTATTTACA+GGG | + | chr1.3:24638108-24638127 | None:intergenic | 40.0% | |
| GATACTTACCAGACACGATA+CGG | + | chr1.3:24639598-24639617 | None:intergenic | 40.0% | |
| GATCTCCTACTGCTAAACAA+TGG | - | chr1.3:24638251-24638270 | MS.gene063250:intron | 40.0% | |
| GCTTTAGCATAAGTGATCGA+AGG | + | chr1.3:24637808-24637827 | None:intergenic | 40.0% | |
| GGATCTTTACTCTAGCTACA+TGG | - | chr1.3:24642172-24642191 | MS.gene063250:intron | 40.0% | |
| GTAAGTCTCAACTCAGTCAA+AGG | + | chr1.3:24638318-24638337 | None:intergenic | 40.0% | |
| TAAGGTTCTCTACTATGCCT+GGG | - | chr1.3:24642332-24642351 | MS.gene063250:intron | 40.0% | |
| TAAGTGCATCCAAAAAAGGG+TGG | + | chr1.3:24642618-24642637 | None:intergenic | 40.0% | |
| TACATTTCCAGGGACATTTC+CGG | - | chr1.3:24638901-24638920 | MS.gene063250:intron | 40.0% | |
| TCAACTCAGTCAAAGGCTTT+GGG | + | chr1.3:24638311-24638330 | None:intergenic | 40.0% | |
| TCAGCATACTGCCTAAGAAA+TGG | + | chr1.3:24641698-24641717 | None:intergenic | 40.0% | |
| TGACCCACATCGTTATTTAC+AGG | + | chr1.3:24638109-24638128 | None:intergenic | 40.0% | |
| TGGAGACTGCTGTAAAATCA+TGG | - | chr1.3:24641345-24641364 | MS.gene063250:intron | 40.0% | |
| TGTGATGAAATATGACGGTG+CGG | - | chr1.3:24638058-24638077 | MS.gene063250:CDS | 40.0% | |
| TTTATACTCGGTAGATCACC+AGG | + | chr1.3:24640135-24640154 | None:intergenic | 40.0% | |
| TTTCTCCGCCATTCTTTCAT+GGG | - | chr1.3:24640285-24640304 | MS.gene063250:intron | 40.0% | |
| ! | AGCTTGAATGCCGATTATTG+GGG | - | chr1.3:24638023-24638042 | MS.gene063250:CDS | 40.0% |
| ! | CATACTTTTCAGACTGCAAG+AGG | + | chr1.3:24641277-24641296 | None:intergenic | 40.0% |
| ! | CATTATGTGGCTTTTGTCAG+AGG | - | chr1.3:24640584-24640603 | MS.gene063250:intron | 40.0% |
| ! | CTGTCCCTTTTCATTTGAAC+TGG | + | chr1.3:24642575-24642594 | None:intergenic | 40.0% |
| ! | GAAGCTTGAATGCCGATTAT+TGG | - | chr1.3:24638021-24638040 | MS.gene063250:CDS | 40.0% |
| ! | GAGATGTCTTTGAAGGATCA+AGG | - | chr1.3:24636651-24636670 | MS.gene063250:CDS | 40.0% |
| ! | GATCCAGAAATTTTGGACGT+TGG | - | chr1.3:24642728-24642747 | MS.gene063250:CDS | 40.0% |
| ! | GATCTTACCTTTTCCCATTC+GGG | + | chr1.3:24638810-24638829 | None:intergenic | 40.0% |
| ! | GCATTGTGGTTTTCTTGATC+TGG | - | chr1.3:24636877-24636896 | MS.gene063250:CDS | 40.0% |
| ! | GGTACCTACCTAAAAAGTGT+GGG | + | chr1.3:24636756-24636775 | None:intergenic | 40.0% |
| ! | GTCTTTTCTTTGAACAAGCG+AGG | + | chr1.3:24642770-24642789 | None:intergenic | 40.0% |
| ! | GTTCAGGGATCCAGAAATTT+TGG | - | chr1.3:24642721-24642740 | MS.gene063250:CDS | 40.0% |
| ! | TGATTTTACAGCAGTCTCCA+TGG | + | chr1.3:24641345-24641364 | None:intergenic | 40.0% |
| ! | TGTGTCTCATTCCATTTTCC+AGG | - | chr1.3:24641637-24641656 | MS.gene063250:intron | 40.0% |
| ! | TTTTCTCCGCCATTCTTTCA+TGG | - | chr1.3:24640284-24640303 | MS.gene063250:intron | 40.0% |
| !! | AAGCTCTGAGATGTCTTTGA+AGG | - | chr1.3:24636644-24636663 | MS.gene063250:CDS | 40.0% |
| !! | ACTATGTGGGATTGGTTAGA+TGG | - | chr1.3:24640067-24640086 | MS.gene063250:CDS | 40.0% |
| !! | CAACTTGTTGCTACGAATGA+TGG | + | chr1.3:24640108-24640127 | None:intergenic | 40.0% |
| !! | CACTGCTTTTGATTGGAAGT+TGG | - | chr1.3:24639191-24639210 | MS.gene063250:intron | 40.0% |
| !! | CTTCTGTAGAAGGCACTATT+AGG | + | chr1.3:24641985-24642004 | None:intergenic | 40.0% |
| !! | GCAGCTGTTTTCCATTTCTT+AGG | - | chr1.3:24641684-24641703 | MS.gene063250:intron | 40.0% |
| !! | GTGTGGATTAGGAATTGGAA+TGG | + | chr1.3:24640248-24640267 | None:intergenic | 40.0% |
| !! | GTTGATTTTGATACTCTCCG+GGG | + | chr1.3:24640423-24640442 | None:intergenic | 40.0% |
| !! | GTTGTTTTGTCACTGCATTG+TGG | - | chr1.3:24636863-24636882 | MS.gene063250:CDS | 40.0% |
| !!! | CGTTGATTTTGATACTCTCC+GGG | + | chr1.3:24640424-24640443 | None:intergenic | 40.0% |
| !!! | GGTAACGAGTTTTTCAAGTC+AGG | - | chr1.3:24636672-24636691 | MS.gene063250:CDS | 40.0% |
| AAAAGGGACAGATACTGTGC+AGG | - | chr1.3:24642584-24642603 | MS.gene063250:intron | 45.0% | |
| AAACAGCTGCTGTGTGTTTC+TGG | + | chr1.3:24641674-24641693 | None:intergenic | 45.0% | |
| AACAACATTCTGTGTCTGCC+AGG | - | chr1.3:24642450-24642469 | MS.gene063250:intron | 45.0% | |
| AAGGCCAAGGATCAAGGAAA+TGG | - | chr1.3:24642479-24642498 | MS.gene063250:intron | 45.0% | |
| ACAGGCCCTTAGTGTATGTT+TGG | - | chr1.3:24637440-24637459 | MS.gene063250:intron | 45.0% | |
| ACATGCGAGTGGCGTTAAAT+TGG | - | chr1.3:24640504-24640523 | MS.gene063250:intron | 45.0% | |
| AGGGCCAGTCACTTAGATTA+GGG | + | chr1.3:24638089-24638108 | None:intergenic | 45.0% | |
| CAAAACAGAGCACAAGCCAT+TGG | + | chr1.3:24639654-24639673 | None:intergenic | 45.0% | |
| CATGCGAGTGGCGTTAAATT+GGG | - | chr1.3:24640505-24640524 | MS.gene063250:intron | 45.0% | |
| CTAAGGTTCTCTACTATGCC+TGG | - | chr1.3:24642331-24642350 | MS.gene063250:intron | 45.0% | |
| CTAATCCAAGGTTCGACGAA+TGG | - | chr1.3:24640941-24640960 | MS.gene063250:intron | 45.0% | |
| CTCAACTCAGTCAAAGGCTT+TGG | + | chr1.3:24638312-24638331 | None:intergenic | 45.0% | |
| GCTTCCATTTCCTTGATCCT+TGG | + | chr1.3:24642486-24642505 | None:intergenic | 45.0% | |
| GGCATAGTAGAGAACCTTAG+AGG | + | chr1.3:24642331-24642350 | None:intergenic | 45.0% | |
| GGCCCTGTAAATAACGATGT+GGG | - | chr1.3:24638103-24638122 | MS.gene063250:CDS | 45.0% | |
| GGGTACCTACCTAAAAAGTG+TGG | + | chr1.3:24636757-24636776 | None:intergenic | 45.0% | |
| GTTGTTTAAGGACATGCGAG+TGG | - | chr1.3:24640493-24640512 | MS.gene063250:intron | 45.0% | |
| TAAGTCCATTCGTCGAACCT+TGG | + | chr1.3:24640949-24640968 | None:intergenic | 45.0% | |
| TAGCCCCTAATCTAAGTGAC+TGG | - | chr1.3:24638082-24638101 | MS.gene063250:CDS | 45.0% | |
| TCATAAAAGGAGCCGGGATA+CGG | + | chr1.3:24640665-24640684 | None:intergenic | 45.0% | |
| TGACTCAAAGGCCTGGAAAA+TGG | + | chr1.3:24641651-24641670 | None:intergenic | 45.0% | |
| TGCTGCAGCATTGCTACAAT+TGG | - | chr1.3:24638734-24638753 | MS.gene063250:intron | 45.0% | |
| TGGCCCTGTAAATAACGATG+TGG | - | chr1.3:24638102-24638121 | MS.gene063250:CDS | 45.0% | |
| TTCTCTACTATGCCTGGGAT+GGG | - | chr1.3:24642337-24642356 | MS.gene063250:intron | 45.0% | |
| TTTCCGGAAGGGATGCATAT+TGG | - | chr1.3:24638917-24638936 | MS.gene063250:intron | 45.0% | |
| ! | AACCACAATTTTCGCACGGA+AGG | + | chr1.3:24642547-24642566 | None:intergenic | 45.0% |
| ! | ACCTTCAACTCCCTTTTAGC+CGG | - | chr1.3:24637676-24637695 | MS.gene063250:CDS | 45.0% |
| ! | GTCTGCGTCTTTTCCTTATC+AGG | + | chr1.3:24641410-24641429 | None:intergenic | 45.0% |
| ! | TGGAAGCATGCACAGAATGA+TGG | - | chr1.3:24642499-24642518 | MS.gene063250:intron | 45.0% |
| ! | TGGTTTCGAAAGGGTGTACA+CGG | + | chr1.3:24638206-24638225 | None:intergenic | 45.0% |
| ! | TGTTGCTACGAATGATGGAG+CGG | + | chr1.3:24640103-24640122 | None:intergenic | 45.0% |
| !! | AGGAAATGAAAGGTACTCGC+TGG | + | chr1.3:24638427-24638446 | None:intergenic | 45.0% |
| !! | CAGTCAAAGGCTTTGGGTTA+AGG | + | chr1.3:24638305-24638324 | None:intergenic | 45.0% |
| !! | GTGTGTTTCTGGTGACTCAA+AGG | + | chr1.3:24641663-24641682 | None:intergenic | 45.0% |
| !!! | CACTAAGGGCCTGTTTTGAT+TGG | + | chr1.3:24637434-24637453 | None:intergenic | 45.0% |
| !!! | GGTTACTTTTTGCCACCACT+TGG | + | chr1.3:24640382-24640401 | None:intergenic | 45.0% |
| !!! | GTTTCTCTCCCACCCTTTTT+TGG | - | chr1.3:24642606-24642625 | MS.gene063250:intron | 45.0% |
| ACACGATACGGCGAGGAAAT+TGG | + | chr1.3:24639586-24639605 | None:intergenic | 50.0% | |
| CAATGCTGCAGCACGATTAC+TGG | + | chr1.3:24638727-24638746 | None:intergenic | 50.0% | |
| CAGGGCCAGTCACTTAGATT+AGG | + | chr1.3:24638090-24638109 | None:intergenic | 50.0% | |
| CATAAAAGGAGCCGGGATAC+GGG | + | chr1.3:24640664-24640683 | None:intergenic | 50.0% | |
| CCTCCAATATGCATCCCTTC+CGG | + | chr1.3:24638923-24638942 | None:intergenic | 50.0% | |
| CTCCTTCCGTGCGAAAATTG+TGG | - | chr1.3:24642542-24642561 | MS.gene063250:intron | 50.0% | |
| CTGGATCCCTGAACATAGCA+AGG | + | chr1.3:24642715-24642734 | None:intergenic | 50.0% | |
| GATACGTTGGGATGCACCAA+TGG | - | chr1.3:24639635-24639654 | MS.gene063250:intron | 50.0% | |
| GCGCCAACGTCCAAAATTTC+TGG | + | chr1.3:24642734-24642753 | None:intergenic | 50.0% | |
| GGGCCAGTCACTTAGATTAG+GGG | + | chr1.3:24638088-24638107 | None:intergenic | 50.0% | |
| GTAGCAACAAGTTGCTGTCC+TGG | - | chr1.3:24640114-24640133 | MS.gene063250:CDS | 50.0% | |
| GTTCTCTACTATGCCTGGGA+TGG | - | chr1.3:24642336-24642355 | MS.gene063250:intron | 50.0% | |
| TAGCAAGCGAGCTCAAGAAG+TGG | - | chr1.3:24639367-24639386 | MS.gene063250:intron | 50.0% | |
| TCAAATAGCGCGCTAGAGCA+CGG | - | chr1.3:24639114-24639133 | MS.gene063250:intron | 50.0% | |
| TCACATTGAAAGCTTCCGGG+TGG | - | chr1.3:24640356-24640375 | MS.gene063250:intron | 50.0% | |
| TCCGGCTAAAAGGGAGTTGA+AGG | + | chr1.3:24637680-24637699 | None:intergenic | 50.0% | |
| TCTGGAAAGGCCAAGGATCA+AGG | - | chr1.3:24642473-24642492 | MS.gene063250:intron | 50.0% | |
| TTCCAGGGACATTTCCGGAA+GGG | - | chr1.3:24638906-24638925 | MS.gene063250:intron | 50.0% | |
| TTTCCAGGGACATTTCCGGA+AGG | - | chr1.3:24638905-24638924 | MS.gene063250:intron | 50.0% | |
| ! | CGAATGATGGAGCGGTAAGA+AGG | + | chr1.3:24640095-24640114 | None:intergenic | 50.0% |
| ! | GGTTTCGAAAGGGTGTACAC+GGG | + | chr1.3:24638205-24638224 | None:intergenic | 50.0% |
| ! | TTTCTGGTGACTCAAAGGCC+TGG | + | chr1.3:24641658-24641677 | None:intergenic | 50.0% |
| !! | GACGTGGTGGCTTTAGATTG+TGG | + | chr1.3:24640560-24640579 | None:intergenic | 50.0% |
| !!! | GTTTTTGGCAGCCACTAAGC+AGG | + | chr1.3:24641741-24641760 | None:intergenic | 50.0% |
| ATCCCTTCCGGAAATGTCCC+TGG | + | chr1.3:24638911-24638930 | None:intergenic | 55.0% | |
| CATTCTGTGTCTGCCAGGTC+TGG | - | chr1.3:24642455-24642474 | MS.gene063250:intron | 55.0% | |
| CCGGAAGGGATGCATATTGG+AGG | - | chr1.3:24638920-24638939 | MS.gene063250:intron | 55.0% | |
| CTCAAGAGCAGCCTGCTTAG+TGG | - | chr1.3:24641727-24641746 | MS.gene063250:intron | 55.0% | |
| CTCATTCCTCGTCGAGACCA+TGG | - | chr1.3:24641325-24641344 | MS.gene063250:intron | 55.0% | |
| GCTAGAGCACGGTAGTGTAG+TGG | - | chr1.3:24639125-24639144 | MS.gene063250:intron | 55.0% | |
| TGTGTCTGCCAGGTCTGGAA+AGG | - | chr1.3:24642460-24642479 | MS.gene063250:intron | 55.0% | |
| TTACCAGACACGATACGGCG+AGG | + | chr1.3:24639593-24639612 | None:intergenic | 55.0% | |
| TTTCCTCGCCGTATCGTGTC+TGG | - | chr1.3:24639587-24639606 | MS.gene063250:intron | 55.0% | |
| ! | ATCCTTGGCCTTTCCAGACC+TGG | + | chr1.3:24642471-24642490 | None:intergenic | 55.0% |
| AAAGCTTCCGGGTGGCCAAG+TGG | - | chr1.3:24640364-24640383 | MS.gene063250:intron | 60.0% | |
| CAGTCTCCATGGTCTCGACG+AGG | + | chr1.3:24641334-24641353 | None:intergenic | 60.0% | |
| GGTGTACACGGGATACGCTC+CGG | + | chr1.3:24638194-24638213 | None:intergenic | 60.0% | |
| GTGTACACGGGATACGCTCC+GGG | + | chr1.3:24638193-24638212 | None:intergenic | 60.0% | |
| TGCCAGGTCTGGAAAGGCCA+AGG | - | chr1.3:24642466-24642485 | MS.gene063250:intron | 60.0% | |
| TTTGCCACCACTTGGCCACC+CGG | + | chr1.3:24640374-24640393 | None:intergenic | 60.0% | |
| GCTTCCGGGTGGCCAAGTGG+TGG | - | chr1.3:24640367-24640386 | MS.gene063250:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 24636621 | 24642802 | 24636621 | ID=MS.gene063250 |
| chr1.3 | mRNA | 24636621 | 24642802 | 24636621 | ID=MS.gene063250.t1;Parent=MS.gene063250 |
| chr1.3 | exon | 24642657 | 24642802 | 24642657 | ID=MS.gene063250.t1.exon1;Parent=MS.gene063250.t1 |
| chr1.3 | CDS | 24642657 | 24642802 | 24642657 | ID=cds.MS.gene063250.t1;Parent=MS.gene063250.t1 |
| chr1.3 | exon | 24640602 | 24640695 | 24640602 | ID=MS.gene063250.t1.exon2;Parent=MS.gene063250.t1 |
| chr1.3 | CDS | 24640602 | 24640695 | 24640602 | ID=cds.MS.gene063250.t1;Parent=MS.gene063250.t1 |
| chr1.3 | exon | 24640461 | 24640511 | 24640461 | ID=MS.gene063250.t1.exon3;Parent=MS.gene063250.t1 |
| chr1.3 | CDS | 24640461 | 24640511 | 24640461 | ID=cds.MS.gene063250.t1;Parent=MS.gene063250.t1 |
| chr1.3 | exon | 24639975 | 24640148 | 24639975 | ID=MS.gene063250.t1.exon4;Parent=MS.gene063250.t1 |
| chr1.3 | CDS | 24639975 | 24640148 | 24639975 | ID=cds.MS.gene063250.t1;Parent=MS.gene063250.t1 |
| chr1.3 | exon | 24637960 | 24638139 | 24637960 | ID=MS.gene063250.t1.exon5;Parent=MS.gene063250.t1 |
| chr1.3 | CDS | 24637960 | 24638139 | 24637960 | ID=cds.MS.gene063250.t1;Parent=MS.gene063250.t1 |
| chr1.3 | exon | 24637645 | 24637764 | 24637645 | ID=MS.gene063250.t1.exon6;Parent=MS.gene063250.t1 |
| chr1.3 | CDS | 24637645 | 24637764 | 24637645 | ID=cds.MS.gene063250.t1;Parent=MS.gene063250.t1 |
| chr1.3 | exon | 24636818 | 24636951 | 24636818 | ID=MS.gene063250.t1.exon7;Parent=MS.gene063250.t1 |
| chr1.3 | CDS | 24636818 | 24636951 | 24636818 | ID=cds.MS.gene063250.t1;Parent=MS.gene063250.t1 |
| chr1.3 | exon | 24636621 | 24636696 | 24636621 | ID=MS.gene063250.t1.exon8;Parent=MS.gene063250.t1 |
| chr1.3 | CDS | 24636621 | 24636696 | 24636621 | ID=cds.MS.gene063250.t1;Parent=MS.gene063250.t1 |
| Gene Sequence |
| Protein sequence |
