AlfalfaGEDB | MS.gene063280

M. sativa cultivar XinJiangDaYe / MS.gene063280

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02365.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063280.t1	XP_003630552.1	88.7	150	2	1	1	135	1	150	1.40E-70	275.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063280.t1	Q9FY93	59.7	139	40	2	1	124	1	138	2.6e-41	169.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063280.t1	G7LI31	88.7	150	2	1	1	135	1	150	1.0e-70	275.4

TFs/TRs:

Gene ID	Type	Classification
MS.gene063280.t1	TF	NAC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049239	MS.gene063280	0.802364	5.81E-49	-1.69E-46
MS.gene049298	MS.gene063280	0.845082	5.07E-59	-1.69E-46
MS.gene050338	MS.gene063280	0.800071	1.71E-48	-1.69E-46
MS.gene050444	MS.gene063280	-0.819354	1.21E-52	-1.69E-46
MS.gene050707	MS.gene063280	0.821594	3.72E-53	-1.69E-46
MS.gene051539	MS.gene063280	0.832352	9.93E-56	-1.69E-46
MS.gene053108	MS.gene063280	0.809064	2.28E-50	-1.69E-46
MS.gene053776	MS.gene063280	0.830652	2.60E-55	-1.69E-46
MS.gene054850	MS.gene063280	0.820559	6.44E-53	-1.69E-46
MS.gene054941	MS.gene063280	0.85621	3.75E-62	-1.69E-46
MS.gene056387	MS.gene063280	-0.844749	6.23E-59	-1.69E-46
MS.gene05652	MS.gene063280	0.808222	3.44E-50	-1.69E-46
MS.gene056618	MS.gene063280	0.818804	1.62E-52	-1.69E-46
MS.gene057669	MS.gene063280	0.815267	1.01E-51	-1.69E-46
MS.gene057717	MS.gene063280	0.829087	6.26E-55	-1.69E-46
MS.gene058128	MS.gene063280	0.812009	5.26E-51	-1.69E-46
MS.gene058853	MS.gene063280	0.817625	2.99E-52	-1.69E-46
MS.gene05926	MS.gene063280	0.815278	1.00E-51	-1.69E-46
MS.gene059905	MS.gene063280	0.806899	6.57E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063280.t1	MTR_8g099750	88.667	150	2	1	1	135	1	150	2.75e-94	271
MS.gene063280.t1	MTR_3g098810	68.027	147	30	1	1	130	1	147	6.27e-68	202
MS.gene063280.t1	MTR_3g098810	68.027	147	30	1	1	130	1	147	4.69e-67	203
MS.gene063280.t1	MTR_7g005280	63.571	140	34	3	1	124	1	139	3.16e-56	176
MS.gene063280.t1	MTR_4g081870	51.938	129	47	2	12	125	7	135	6.34e-38	129
MS.gene063280.t1	MTR_5g041940	51.969	127	46	2	14	125	3	129	5.43e-37	127
MS.gene063280.t1	MTR_4g089135	47.826	138	55	2	13	133	14	151	1.01e-36	128
MS.gene063280.t1	MTR_2g080010	48.148	135	53	2	14	131	15	149	2.24e-36	127
MS.gene063280.t1	MTR_7g085220	46.043	139	51	2	12	126	6	144	4.61e-36	126
MS.gene063280.t1	MTR_3g088110	48.462	130	53	2	13	128	6	135	1.69e-35	124
MS.gene063280.t1	MTR_2g093810	48.092	131	51	2	14	127	14	144	3.65e-35	124
MS.gene063280.t1	MTR_7g100990	44.526	137	59	2	13	132	10	146	4.93e-35	123
MS.gene063280.t1	MTR_5g012080	47.586	145	54	4	9	134	2	143	5.11e-34	121
MS.gene063280.t1	MTR_3g064580	47.826	138	55	2	14	134	6	143	1.25e-33	124
MS.gene063280.t1	MTR_2157s0010	46.512	129	51	2	14	124	8	136	5.29e-33	117
MS.gene063280.t1	MTR_8g094580	45.185	135	60	2	10	130	3	137	5.73e-33	117
MS.gene063280.t1	MTR_5g076850	47.656	128	50	2	14	124	6	133	1.75e-32	120
MS.gene063280.t1	MTR_6g011860	44.604	139	61	2	9	131	10	148	5.27e-32	117
MS.gene063280.t1	MTR_4g101680	45.522	134	55	3	9	124	2	135	8.95e-32	115
MS.gene063280.t1	MTR_3g096920	45.985	137	56	4	10	130	3	137	1.54e-31	114
MS.gene063280.t1	MTR_4g036030	43.750	144	60	3	9	134	2	142	2.34e-31	114
MS.gene063280.t1	MTR_8g059170	43.284	134	61	2	14	132	14	147	3.37e-31	113
MS.gene063280.t1	MTR_3g096920	44.444	135	61	2	10	130	3	137	6.70e-31	112
MS.gene063280.t1	MTR_2g079990	42.336	137	64	2	14	135	16	152	7.86e-31	113
MS.gene063280.t1	MTR_2g079990	42.336	137	64	2	14	135	16	152	1.00e-30	113
MS.gene063280.t1	MTR_8g076110	42.105	133	59	2	14	128	6	138	1.21e-30	112
MS.gene063280.t1	MTR_6g477900	43.066	137	61	2	14	133	6	142	4.38e-30	108
MS.gene063280.t1	MTR_3g093040	43.307	127	55	2	14	123	108	234	7.42e-30	109
MS.gene063280.t1	MTR_3g096140	41.176	136	63	2	16	134	9	144	9.42e-30	108
MS.gene063280.t1	MTR_8g467490	42.754	138	58	3	8	124	4	141	9.61e-30	110
MS.gene063280.t1	MTR_5g040420	45.238	126	52	2	16	124	16	141	1.04e-29	110
MS.gene063280.t1	MTR_2g064090	44.186	129	55	2	14	125	6	134	1.06e-29	110
MS.gene063280.t1	MTR_4g098630	43.704	135	56	3	12	126	4	138	1.31e-29	109
MS.gene063280.t1	MTR_2g068880	40.714	140	62	3	6	124	13	152	2.40e-29	108
MS.gene063280.t1	MTR_2g062730	41.045	134	60	2	10	124	6	139	2.61e-29	108
MS.gene063280.t1	MTR_3g096140	41.176	136	63	2	16	134	9	144	4.72e-29	108
MS.gene063280.t1	MTR_5g021710	41.860	129	57	2	14	124	8	136	6.39e-29	108
MS.gene063280.t1	MTR_1g096430	42.969	128	55	2	14	123	7	134	7.98e-29	107
MS.gene063280.t1	MTR_5g014300	41.727	139	57	3	10	124	2	140	1.99e-28	106
MS.gene063280.t1	MTR_2g068920	43.077	130	52	3	16	124	23	151	2.10e-28	105
MS.gene063280.t1	MTR_3g435150	42.063	126	58	2	14	124	16	141	2.72e-28	105
MS.gene063280.t1	MTR_6g084430	41.406	128	60	2	14	126	5	132	2.81e-28	105
MS.gene063280.t1	MTR_4g035590	43.411	129	55	2	14	124	8	136	5.47e-28	105
MS.gene063280.t1	MTR_2g078700	42.308	130	58	3	12	124	21	150	5.94e-28	105
MS.gene063280.t1	MTR_8g024480	38.000	150	74	3	2	133	3	151	6.80e-28	106
MS.gene063280.t1	MTR_5g069030	44.615	130	55	2	11	123	22	151	9.88e-28	107
MS.gene063280.t1	MTR_3g093050	42.308	130	58	2	11	123	19	148	1.82e-27	106
MS.gene063280.t1	MTR_3g093050	42.308	130	58	2	11	123	19	148	2.33e-27	105
MS.gene063280.t1	MTR_4g108760	41.270	126	59	2	14	124	17	142	2.33e-27	103
MS.gene063280.t1	MTR_2g086880	41.085	129	60	2	10	122	14	142	3.84e-27	105
MS.gene063280.t1	MTR_5g090970	44.094	127	53	3	16	124	20	146	5.03e-27	102
MS.gene063280.t1	MTR_2g086880	41.085	129	60	2	10	122	14	142	5.08e-27	104
MS.gene063280.t1	MTR_5g090970	44.444	126	53	3	16	124	20	145	5.44e-27	102
MS.gene063280.t1	MTR_8g093580	39.437	142	69	2	10	134	2	143	1.07e-26	103
MS.gene063280.t1	MTR_1g090720	42.857	126	55	2	14	122	42	167	1.21e-26	103
MS.gene063280.t1	MTR_8g063550	40.909	132	61	2	10	124	2	133	1.25e-26	101
MS.gene063280.t1	MTR_8g063550	40.909	132	61	2	10	124	2	133	1.60e-26	102
MS.gene063280.t1	MTR_4g134460	40.769	130	61	2	16	129	56	185	1.64e-26	102
MS.gene063280.t1	MTR_8g063550	40.909	132	61	2	10	124	2	133	3.11e-26	102
MS.gene063280.t1	MTR_6g012670	39.259	135	67	2	13	132	19	153	3.53e-26	100
MS.gene063280.t1	MTR_7g085260	38.406	138	66	2	14	132	17	154	1.83e-25	99.4
MS.gene063280.t1	MTR_3g070030	39.850	133	65	2	7	124	12	144	2.05e-25	99.0
MS.gene063280.t1	MTR_3g109340	38.281	128	62	2	14	124	22	149	2.99e-25	98.6
MS.gene063280.t1	MTR_3g109340	38.281	128	62	2	14	124	22	149	3.09e-25	98.6
MS.gene063280.t1	MTR_8g023840	42.636	129	55	4	14	123	11	139	3.11e-25	99.0
MS.gene063280.t1	MTR_1g097300	42.063	126	56	2	16	124	21	146	4.22e-25	99.4
MS.gene063280.t1	MTR_1g008740	40.602	133	53	4	14	124	27	155	6.74e-25	97.4
MS.gene063280.t1	MTR_1g008740	40.602	133	53	4	14	124	13	141	7.40e-25	97.4
MS.gene063280.t1	MTR_3g116070	40.310	129	59	3	14	124	23	151	1.29e-24	96.7
MS.gene063280.t1	MTR_4g075980	39.370	127	59	2	16	124	17	143	4.65e-24	94.4
MS.gene063280.t1	MTR_1g069805	36.296	135	69	2	7	124	3	137	6.27e-24	93.6
MS.gene063280.t1	MTR_1g090723	38.462	130	60	4	16	126	10	138	1.52e-23	95.1
MS.gene063280.t1	MTR_1g090723	38.462	130	60	4	16	126	10	138	1.57e-23	95.1
MS.gene063280.t1	MTR_1g090723	38.462	130	60	4	16	126	10	138	1.82e-23	94.7
MS.gene063280.t1	MTR_6g032770	36.719	128	64	2	14	124	18	145	2.43e-23	93.6
MS.gene063280.t1	MTR_0036s0150	36.691	139	68	4	16	135	7	144	5.83e-23	93.2
MS.gene063280.t1	MTR_8g023930	41.860	129	56	4	14	123	24	152	5.85e-23	93.2
MS.gene063280.t1	MTR_7g011130	37.594	133	68	2	7	124	12	144	7.06e-23	92.0
MS.gene063280.t1	MTR_7g097090	37.692	130	64	2	12	124	8	137	7.63e-23	90.9
MS.gene063280.t1	MTR_8g023860	40.152	132	60	4	11	123	9	140	1.42e-22	91.7
MS.gene063280.t1	MTR_7g011120	36.842	133	69	2	7	124	1	133	3.89e-22	89.4
MS.gene063280.t1	MTR_2g064470	35.938	128	65	4	12	124	9	134	9.11e-22	88.2
MS.gene063280.t1	MTR_4g094302	36.220	127	58	4	14	124	11	130	3.79e-21	83.6
MS.gene063280.t1	MTR_4g052620	35.915	142	70	3	14	134	5	146	7.58e-21	85.1
MS.gene063280.t1	MTR_3g096140	37.190	121	59	2	31	134	3	123	1.13e-20	85.9
MS.gene063280.t1	MTR_4g094302	36.220	127	58	4	14	124	11	130	1.80e-20	82.8
MS.gene063280.t1	MTR_2g086690	36.170	141	68	3	15	133	5	145	1.26e-19	81.6
MS.gene063280.t1	MTR_8g023900	37.405	131	63	4	17	128	196	326	1.73e-19	83.6
MS.gene063280.t1	MTR_8g023900	35.461	141	70	5	14	135	12	150	2.12e-19	83.2
MS.gene063280.t1	MTR_3g070040	38.333	120	60	2	18	124	12	130	4.35e-19	81.6
MS.gene063280.t1	MTR_8g093790	36.667	120	59	4	13	124	9	119	3.25e-18	76.6
MS.gene063280.t1	MTR_7g070140	51.282	78	23	1	62	124	14	91	1.03e-17	74.3
MS.gene063280.t1	MTR_7g105170	33.103	145	73	4	14	135	4	147	2.35e-17	75.9
MS.gene063280.t1	MTR_8g094580	42.308	78	33	1	65	130	6	83	6.26e-14	66.2
MS.gene063280.t1	MTR_8g023880	31.469	143	67	5	12	123	5	147	1.45e-13	65.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063280.t1	AT5G13180	59.712	139	40	2	1	124	1	138	2.32e-53	168
MS.gene063280.t1	AT2G33480	57.042	142	46	3	1	128	1	141	5.99e-50	160
MS.gene063280.t1	AT2G33480	57.042	142	46	3	1	128	1	141	7.20e-50	160
MS.gene063280.t1	AT1G69490	50.000	128	49	2	12	124	7	134	3.34e-36	125
MS.gene063280.t1	AT1G61110	48.529	136	54	2	7	126	9	144	9.00e-36	125
MS.gene063280.t1	AT1G77450	46.429	140	60	3	6	130	1	140	1.37e-35	123
MS.gene063280.t1	AT3G04070	45.324	139	56	2	8	126	4	142	1.09e-34	123
MS.gene063280.t1	AT3G04070	45.324	139	56	2	8	126	4	142	1.62e-34	123
MS.gene063280.t1	AT1G65910	48.438	128	49	2	14	124	6	133	5.11e-34	124
MS.gene063280.t1	AT3G15510	47.328	131	52	2	18	131	21	151	9.51e-34	121
MS.gene063280.t1	AT1G01720	46.212	132	57	2	13	130	6	137	1.45e-33	119
MS.gene063280.t1	AT3G10490	43.066	137	61	2	14	133	27	163	4.06e-33	116
MS.gene063280.t1	AT1G33060	45.455	132	55	2	14	128	24	155	1.11e-32	121
MS.gene063280.t1	AT1G33060	45.455	132	55	2	14	128	24	155	1.23e-32	120
MS.gene063280.t1	AT5G46590	42.254	142	64	2	10	133	2	143	3.89e-32	115
MS.gene063280.t1	AT1G52880	45.113	133	54	2	18	131	21	153	3.99e-32	115
MS.gene063280.t1	AT5G17260	47.328	131	46	3	14	124	6	133	4.24e-32	118
MS.gene063280.t1	AT5G46590	42.254	142	64	2	10	133	2	143	4.73e-32	115
MS.gene063280.t1	AT4G27410	41.606	137	65	2	14	135	14	150	9.18e-32	114
MS.gene063280.t1	AT1G54330	41.481	135	62	2	14	131	6	140	1.41e-31	114
MS.gene063280.t1	AT3G03200	45.185	135	51	3	14	128	6	137	1.58e-31	117
MS.gene063280.t1	AT4G17980	42.029	138	61	2	10	128	2	139	2.25e-31	112
MS.gene063280.t1	AT3G15500	43.796	137	62	2	14	135	14	150	3.04e-31	113
MS.gene063280.t1	AT4G17980	42.029	138	61	2	10	128	2	139	3.89e-31	112
MS.gene063280.t1	AT1G52890	43.796	137	62	2	14	135	14	150	4.79e-31	113
MS.gene063280.t1	AT3G10480	42.857	140	63	2	12	134	25	164	5.98e-31	115
MS.gene063280.t1	AT3G10480	42.857	140	63	2	12	134	25	164	5.98e-31	115
MS.gene063280.t1	AT5G39820	43.382	136	60	3	16	134	22	157	1.89e-30	112
MS.gene063280.t1	AT5G39610	44.444	126	55	2	14	124	20	145	2.35e-30	110
MS.gene063280.t1	AT1G12260	41.667	144	63	3	9	134	2	142	3.35e-30	111
MS.gene063280.t1	AT3G10490	42.754	138	62	2	12	132	25	162	3.36e-30	112
MS.gene063280.t1	AT1G32770	39.189	148	72	2	2	131	4	151	5.36e-30	111
MS.gene063280.t1	AT1G62700	43.056	144	61	3	9	134	2	142	5.68e-30	111
MS.gene063280.t1	AT1G62700	43.056	144	61	3	9	134	2	142	5.68e-30	111
MS.gene063280.t1	AT5G62380	41.667	132	59	2	11	124	4	135	5.85e-30	110
MS.gene063280.t1	AT5G62380	41.667	132	59	2	11	124	4	135	5.85e-30	110
MS.gene063280.t1	AT3G04060	42.308	130	59	2	11	124	17	146	6.49e-30	110
MS.gene063280.t1	AT1G71930	42.222	135	60	2	12	128	7	141	6.98e-30	110
MS.gene063280.t1	AT1G71930	42.222	135	60	2	12	128	7	141	6.98e-30	110
MS.gene063280.t1	AT3G17730	42.029	138	63	2	14	134	6	143	7.16e-30	108
MS.gene063280.t1	AT1G12260	41.667	144	63	3	9	134	2	142	8.10e-30	111
MS.gene063280.t1	AT4G35580	44.882	127	53	2	14	123	9	135	9.37e-30	112
MS.gene063280.t1	AT4G35580	44.882	127	53	2	14	123	9	135	1.01e-29	112
MS.gene063280.t1	AT4G35580	44.882	127	53	2	14	123	9	135	1.05e-29	112
MS.gene063280.t1	AT3G29035	43.651	126	56	2	14	124	24	149	1.63e-29	108
MS.gene063280.t1	AT2G18060	41.860	129	57	2	14	124	9	137	1.85e-29	109
MS.gene063280.t1	AT2G18060	41.860	129	57	2	14	124	9	137	1.85e-29	109
MS.gene063280.t1	AT5G63790	41.912	136	65	2	14	135	50	185	2.65e-29	108
MS.gene063280.t1	AT5G08790	44.961	129	57	2	14	128	7	135	2.96e-29	107
MS.gene063280.t1	AT5G63790	41.912	136	65	2	14	135	60	195	2.98e-29	108
MS.gene063280.t1	AT4G36160	41.085	129	58	2	14	124	14	142	4.29e-29	108
MS.gene063280.t1	AT3G61910	38.129	139	68	2	4	124	1	139	5.03e-29	108
MS.gene063280.t1	AT4G36160	41.085	129	58	2	14	124	10	138	5.07e-29	108
MS.gene063280.t1	AT4G36160	41.085	129	58	2	14	124	10	138	5.07e-29	108
MS.gene063280.t1	AT1G32510	39.726	146	64	2	12	133	4	149	6.43e-29	106
MS.gene063280.t1	AT4G27410	37.662	154	64	3	14	135	14	167	7.47e-29	107
MS.gene063280.t1	AT4G10350	43.609	133	57	2	14	128	9	141	9.28e-29	107
MS.gene063280.t1	AT1G26870	44.094	127	54	2	14	123	16	142	9.48e-29	108
MS.gene063280.t1	AT1G79580	40.580	138	63	2	10	128	13	150	1.16e-28	107
MS.gene063280.t1	AT1G79580	40.580	138	63	2	10	128	13	150	1.16e-28	107
MS.gene063280.t1	AT1G79580	40.580	138	63	2	10	128	13	150	1.16e-28	107
MS.gene063280.t1	AT1G79580	40.580	138	63	2	10	128	13	150	1.16e-28	107
MS.gene063280.t1	AT1G79580	40.580	138	63	2	10	128	13	150	1.16e-28	107
MS.gene063280.t1	AT1G33280	43.609	133	57	2	14	128	8	140	1.71e-28	106
MS.gene063280.t1	AT3G10500	41.176	136	63	2	8	126	3	138	1.75e-28	108
MS.gene063280.t1	AT2G46770	40.299	134	62	2	9	124	11	144	2.10e-28	107
MS.gene063280.t1	AT5G07680	42.063	126	58	2	14	124	3	128	2.40e-28	105
MS.gene063280.t1	AT5G07680	42.063	126	58	2	14	124	17	142	2.57e-28	106
MS.gene063280.t1	AT5G61430	42.063	126	58	2	14	124	16	141	2.93e-28	106
MS.gene063280.t1	AT2G17040	42.520	127	55	2	16	124	8	134	3.35e-28	104
MS.gene063280.t1	AT2G02450	41.538	130	60	2	16	129	53	182	3.77e-28	106
MS.gene063280.t1	AT5G66300	40.580	138	62	3	14	133	12	147	4.66e-28	104
MS.gene063280.t1	AT5G24590	43.511	131	56	2	11	123	10	140	1.03e-27	106
MS.gene063280.t1	AT1G76420	42.308	130	58	2	14	126	22	151	1.14e-27	104
MS.gene063280.t1	AT5G53950	42.188	128	57	2	14	124	17	144	1.27e-27	105
MS.gene063280.t1	AT2G43000	40.000	135	66	2	16	135	20	154	1.28e-27	103
MS.gene063280.t1	AT5G18270	39.416	137	67	2	4	124	11	147	2.74e-27	103
MS.gene063280.t1	AT5G18270	39.416	137	67	2	4	124	11	147	2.82e-27	103
MS.gene063280.t1	AT3G10480	35.057	174	63	3	11	134	24	197	3.28e-27	105
MS.gene063280.t1	AT2G02450	41.538	130	60	2	16	129	53	182	5.31e-27	103
MS.gene063280.t1	AT3G18400	40.476	126	60	2	14	124	5	130	5.65e-27	102
MS.gene063280.t1	AT5G09330	43.939	132	57	3	10	124	2	133	5.78e-27	104
MS.gene063280.t1	AT5G09330	43.939	132	57	3	10	124	2	133	5.78e-27	104
MS.gene063280.t1	AT5G09330	43.939	132	57	3	10	124	2	133	5.78e-27	104
MS.gene063280.t1	AT5G09330	43.939	132	57	3	10	124	2	133	5.78e-27	104
MS.gene063280.t1	AT5G09330	43.939	132	57	3	10	124	2	133	5.78e-27	104
MS.gene063280.t1	AT5G04395	39.437	142	55	2	14	124	28	169	6.53e-27	99.4
MS.gene063280.t1	AT3G15170	40.769	130	60	2	12	124	18	147	8.41e-27	101
MS.gene063280.t1	AT5G64060	40.909	132	61	2	10	124	2	133	9.07e-27	102
MS.gene063280.t1	AT5G04410	39.552	134	64	2	8	124	3	136	3.47e-26	102
MS.gene063280.t1	AT3G44290	37.226	137	70	2	7	127	7	143	1.58e-25	96.7
MS.gene063280.t1	AT2G24430	39.568	139	67	2	14	135	16	154	1.79e-25	98.6
MS.gene063280.t1	AT2G24430	39.568	139	67	2	14	135	16	154	1.79e-25	98.6
MS.gene063280.t1	AT3G49530	40.625	128	58	2	14	123	13	140	3.16e-25	99.0
MS.gene063280.t1	AT1G34180	43.651	126	54	2	16	124	18	143	4.10e-25	99.0
MS.gene063280.t1	AT1G34180	43.651	126	54	2	16	124	18	143	4.63e-25	99.4
MS.gene063280.t1	AT3G49530	40.625	128	58	2	14	123	13	140	4.83e-25	99.0
MS.gene063280.t1	AT3G44290	37.226	137	70	2	7	127	7	143	1.03e-24	96.7
MS.gene063280.t1	AT3G12977	37.500	128	65	2	12	124	16	143	1.42e-24	95.5
MS.gene063280.t1	AT3G12910	40.625	128	57	3	16	124	23	150	2.00e-24	95.5
MS.gene063280.t1	AT2G27300	37.681	138	70	2	1	122	1	138	2.75e-24	95.5
MS.gene063280.t1	AT1G34190	41.270	126	57	2	16	124	18	143	3.64e-24	97.1
MS.gene063280.t1	AT1G34180	39.855	138	54	2	16	124	18	155	1.56e-23	94.7
MS.gene063280.t1	AT1G34180	39.855	138	54	2	16	124	18	155	1.57e-23	95.1
MS.gene063280.t1	AT5G22290	36.719	128	65	2	11	122	18	145	1.84e-23	93.6
MS.gene063280.t1	AT1G56010	36.364	132	62	4	12	124	17	145	3.34e-22	89.7
MS.gene063280.t1	AT5G50820	38.095	147	67	6	6	134	8	148	2.07e-21	85.1
MS.gene063280.t1	AT5G14000	39.583	96	58	0	7	102	8	103	8.10e-21	82.8
MS.gene063280.t1	AT5G64530	38.211	123	57	3	14	124	3	118	9.88e-21	82.8
MS.gene063280.t1	AT1G02230	35.433	127	63	3	15	122	4	130	1.34e-20	85.9
MS.gene063280.t1	AT1G02250	37.500	128	61	3	15	123	4	131	3.35e-20	84.7
MS.gene063280.t1	AT1G32870	42.222	135	57	4	7	124	5	135	3.53e-20	85.5
MS.gene063280.t1	AT1G32870	42.222	135	57	4	7	124	41	171	3.68e-20	85.5
MS.gene063280.t1	AT5G14000	39.175	97	59	0	6	102	7	103	3.69e-20	82.4
MS.gene063280.t1	AT1G32870	42.222	135	57	4	7	124	5	135	3.77e-20	85.5
MS.gene063280.t1	AT5G64530	38.211	123	57	3	14	124	3	118	3.99e-20	81.6
MS.gene063280.t1	AT4G28530	33.775	151	67	3	7	124	3	153	5.30e-20	84.3
MS.gene063280.t1	AT2G33480	46.988	83	30	2	59	128	3	84	9.19e-18	76.3
MS.gene063280.t1	AT4G01520	36.364	132	62	4	15	124	5	136	3.49e-17	75.9
MS.gene063280.t1	AT4G01550	37.209	129	60	3	17	124	7	135	4.79e-17	76.6
MS.gene063280.t1	AT3G04420	35.659	129	60	4	15	122	4	130	4.17e-16	73.6
MS.gene063280.t1	AT3G04420	35.659	129	60	4	15	122	4	130	4.93e-16	72.8
MS.gene063280.t1	AT4G01540	35.385	130	62	4	17	124	7	136	8.94e-16	72.8
MS.gene063280.t1	AT4G01540	35.385	130	62	4	17	124	7	136	9.80e-16	72.8
MS.gene063280.t1	AT4G01540	35.385	130	62	4	17	124	7	136	1.13e-15	72.8
MS.gene063280.t1	AT4G28530	33.588	131	65	3	7	119	3	129	1.81e-15	71.6
MS.gene063280.t1	AT4G01540	35.385	130	62	4	17	124	7	136	1.89e-15	72.0
MS.gene063280.t1	AT5G22380	35.714	140	67	5	17	134	8	146	2.22e-15	70.1
MS.gene063280.t1	AT3G44350	34.507	142	70	4	14	134	5	144	5.27e-15	67.8
MS.gene063280.t1	AT1G02220	35.714	126	61	4	15	122	4	127	1.50e-14	69.3
MS.gene063280.t1	AT3G44350	34.507	142	70	4	14	134	5	144	4.37e-14	67.0
MS.gene063280.t1	AT1G01010	33.333	135	59	5	17	123	6	137	8.94e-14	67.0
MS.gene063280.t1	AT4G10350	40.741	81	35	1	61	128	14	94	2.95e-12	62.4

Find 33 sgRNAs with CRISPR-Local

Find 63 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTTCTATACTTTGCTTCCT+TGG	0.288379	4.2:-7312815	None:intergenic
AATCAGTTCTAGACCCATTT+GGG	0.329258	4.2:-7312970	None:intergenic
GAACAACAAAATGTGGATAT+TGG	0.340464	4.2:+7312854	MS.gene063280:CDS
CAATCAGTTCTAGACCCATT+TGG	0.376037	4.2:-7312971	None:intergenic
TGTGGATATTGGAAGGCAAC+AGG	0.396475	4.2:+7312865	MS.gene063280:CDS
TGTTTGCAAGTATGATCCTT+GGG	0.435717	4.2:+7312304	MS.gene063280:CDS
CAAAGTATAGAAATAGTAAT+CGG	0.458697	4.2:+7312824	MS.gene063280:CDS
AACATTGACCTCAGGAATGA+TGG	0.468324	4.2:-7312285	None:intergenic
AACACAAGCTCTTCATCTGT+TGG	0.471066	4.2:-7312218	None:intergenic
CAAGCTCTTCATCTGTTGGT+TGG	0.493179	4.2:-7312214	None:intergenic
TATGAAGGGAAATCCCCAAA+TGG	0.497265	4.2:+7312956	MS.gene063280:intron
TATGATCCTTGGGATTTGCC+AGG	0.504380	4.2:+7312314	MS.gene063280:CDS
ATGTTTGCAAGTATGATCCT+TGG	0.507170	4.2:+7312303	MS.gene063280:CDS
AGGAATGATGGAAGCAGGCA+AGG	0.516507	4.2:-7312273	None:intergenic
ACCTCAGGAATGATGGAAGC+AGG	0.516623	4.2:-7312278	None:intergenic
ATGAAGGGAAATCCCCAAAT+GGG	0.516990	4.2:+7312957	MS.gene063280:intron
AACAAAATGTGGATATTGGA+AGG	0.533417	4.2:+7312858	MS.gene063280:CDS
GCCTGCTTCCATCATTCCTG+AGG	0.534650	4.2:+7312277	MS.gene063280:CDS
TACTTGCAAACATTGACCTC+AGG	0.544904	4.2:-7312293	None:intergenic
GGAATGATGGAAGCAGGCAA+GGG	0.549247	4.2:-7312272	None:intergenic
CAAATGGGTCTAGAACTGAT+TGG	0.560786	4.2:+7312972	MS.gene063280:CDS
ATGAGTAGAACAACAAAATG+TGG	0.563550	4.2:+7312847	MS.gene063280:CDS
TACTGACCTGGCAAATCCCA+AGG	0.595838	4.2:-7312320	None:intergenic
TAGTAGTTTCCACATTGATG+AGG	0.604094	4.2:-7313012	None:intergenic
GGAGTGAGTAGATTGCCTCC+TGG	0.605400	4.2:+7312182	MS.gene063280:CDS
GTGGATATTGGAAGGCAACA+GGG	0.617430	4.2:+7312866	MS.gene063280:CDS
ATCAGTTCTAGACCCATTTG+GGG	0.628898	4.2:-7312969	None:intergenic
GTTGGTTGGAAACGAAAACC+AGG	0.630000	4.2:-7312200	None:intergenic
GAATGATGGAAGCAGGCAAG+GGG	0.638798	4.2:-7312271	None:intergenic
TGAATATCGCCTCATCAATG+TGG	0.647802	4.2:+7313003	MS.gene063280:CDS
AACTACTAACAACTCAACCC+AGG	0.658665	4.2:+7313027	MS.gene063280:CDS
GAGGTTGTGATGAACAAGAG+AGG	0.686120	4.2:+7312779	MS.gene063280:CDS
GGTTGGAAACGAAAACCAGG+AGG	0.757632	4.2:-7312197	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAATTATTTAGTGTAAAAA+AGG	-	chr4.2:7312587-7312606	None:intergenic	10.0%
!!!	AAGCTGAATTTTATTAAAAA+TGG	+	chr4.2:7312161-7312180	MS.gene063280:CDS	15.0%
!!!	TAAATCTTATTAACTAGTTT+TGG	+	chr4.2:7312657-7312676	MS.gene063280:intron	15.0%
!!	CAAAGTATAGAAATAGTAAT+CGG	+	chr4.2:7312824-7312843	MS.gene063280:CDS	20.0%
!!	TAGCCATTAACAAATAATAA+AGG	+	chr4.2:7312707-7312726	MS.gene063280:intron	20.0%
!!	TTGTAAAAAAAAATCAACGT+TGG	+	chr4.2:7312421-7312440	MS.gene063280:intron	20.0%
!!!	TCTCCTTTATTATTTGTTAA+TGG	-	chr4.2:7312713-7312732	None:intergenic	20.0%
!!!	TTAACATTGTTTTGTTTGAT+TGG	+	chr4.2:7312747-7312766	MS.gene063280:intron	20.0%
!	AAAAAAAATTTATGGTAGCC+AGG	+	chr4.2:7312460-7312479	MS.gene063280:intron	25.0%
!	ATTTCATCTTCAACTTGTAA+TGG	+	chr4.2:7312901-7312920	MS.gene063280:intron	25.0%
!	GACAATGTATAATATATGCA+AGG	-	chr4.2:7312500-7312519	None:intergenic	25.0%
!	TAACAAATTAATACTACACC+CGG	+	chr4.2:7312348-7312367	MS.gene063280:intron	25.0%
!	TTTGTTTGATTGGTATGTAT+AGG	+	chr4.2:7312757-7312776	MS.gene063280:intron	25.0%
!!!	AAAACTTTGGTTTTCTATGA+AGG	+	chr4.2:7312941-7312960	MS.gene063280:intron	25.0%
!!!	AAACTTTGGTTTTCTATGAA+GGG	+	chr4.2:7312942-7312961	MS.gene063280:intron	25.0%
	AACAAAATGTGGATATTGGA+AGG	+	chr4.2:7312858-7312877	MS.gene063280:CDS	30.0%
	AACAAATTAATACTACACCC+GGG	+	chr4.2:7312349-7312368	MS.gene063280:intron	30.0%
	ATGAGTAGAACAACAAAATG+TGG	+	chr4.2:7312847-7312866	MS.gene063280:CDS	30.0%
	ATTTCTATACTTTGCTTCCT+TGG	-	chr4.2:7312818-7312837	None:intergenic	30.0%
	GAACAACAAAATGTGGATAT+TGG	+	chr4.2:7312854-7312873	MS.gene063280:CDS	30.0%
	TGTATAATATATGCAAGGTC+TGG	-	chr4.2:7312495-7312514	None:intergenic	30.0%
!	CTCATTTTCACAAAACTGAT+TGG	+	chr4.2:7312377-7312396	MS.gene063280:intron	30.0%
!!	TTTGTTATTAGTTACTGACC+TGG	-	chr4.2:7312335-7312354	None:intergenic	30.0%
	ATGTTTGCAAGTATGATCCT+TGG	+	chr4.2:7312303-7312322	MS.gene063280:CDS	35.0%
	CAACTTGTAATGGCATTGTA+GGG	+	chr4.2:7312911-7312930	MS.gene063280:intron	35.0%
	GTAGGGCTAAGAAAAAACTT+TGG	+	chr4.2:7312928-7312947	MS.gene063280:intron	35.0%
	GTTTGATTGGTATGTATAGG+AGG	+	chr4.2:7312760-7312779	MS.gene063280:intron	35.0%
	TAGTAGTTTCCACATTGATG+AGG	-	chr4.2:7313015-7313034	None:intergenic	35.0%
	TCAACTTGTAATGGCATTGT+AGG	+	chr4.2:7312910-7312929	MS.gene063280:intron	35.0%
	TGTTTGCAAGTATGATCCTT+GGG	+	chr4.2:7312304-7312323	MS.gene063280:CDS	35.0%
	TTGTGAAAATGAGTTAGACC+CGG	-	chr4.2:7312370-7312389	None:intergenic	35.0%
!!	AATCAGTTCTAGACCCATTT+GGG	-	chr4.2:7312973-7312992	None:intergenic	35.0%
	AACACAAGCTCTTCATCTGT+TGG	-	chr4.2:7312221-7312240	None:intergenic	40.0%
	AACATTGACCTCAGGAATGA+TGG	-	chr4.2:7312288-7312307	None:intergenic	40.0%
	ATGAAGGGAAATCCCCAAAT+GGG	+	chr4.2:7312957-7312976	MS.gene063280:intron	40.0%
	TACTTGCAAACATTGACCTC+AGG	-	chr4.2:7312296-7312315	None:intergenic	40.0%
	TATGAAGGGAAATCCCCAAA+TGG	+	chr4.2:7312956-7312975	MS.gene063280:intron	40.0%
	TGAATATCGCCTCATCAATG+TGG	+	chr4.2:7313003-7313022	MS.gene063280:CDS	40.0%
	TGTGAAAATGAGTTAGACCC+GGG	-	chr4.2:7312369-7312388	None:intergenic	40.0%
!	AAGGTCTGGAATTCAAATCC+TGG	-	chr4.2:7312481-7312500	None:intergenic	40.0%
!	CAAATGGGTCTAGAACTGAT+TGG	+	chr4.2:7312972-7312991	MS.gene063280:CDS	40.0%
!	TGAGCTTAGATCAGTTGGTA+GGG	-	chr4.2:7312522-7312541	None:intergenic	40.0%
!!	ATCAGTTCTAGACCCATTTG+GGG	-	chr4.2:7312972-7312991	None:intergenic	40.0%
!!	CAATCAGTTCTAGACCCATT+TGG	-	chr4.2:7312974-7312993	None:intergenic	40.0%
	CAAGCTCTTCATCTGTTGGT+TGG	-	chr4.2:7312217-7312236	None:intergenic	45.0%
	GAGGTTGTGATGAACAAGAG+AGG	+	chr4.2:7312779-7312798	MS.gene063280:CDS	45.0%
	GTGAGCTTAGATCAGTTGGT+AGG	-	chr4.2:7312523-7312542	None:intergenic	45.0%
	GTGGATATTGGAAGGCAACA+GGG	+	chr4.2:7312866-7312885	MS.gene063280:CDS	45.0%
	GTTGGTTGGAAACGAAAACC+AGG	-	chr4.2:7312203-7312222	None:intergenic	45.0%
	TATGATCCTTGGGATTTGCC+AGG	+	chr4.2:7312314-7312333	MS.gene063280:CDS	45.0%
	TGTGGATATTGGAAGGCAAC+AGG	+	chr4.2:7312865-7312884	MS.gene063280:CDS	45.0%
!!!	TTTTCTAAAAAAAAAATTTA+TGG	+	chr4.2:7312452-7312471	MS.gene063280:intron	5.0%
	CCAACTGATCTAAGCTCACG+AGG	+	chr4.2:7312524-7312543	MS.gene063280:intron	50.0%
	CCTCGTGAGCTTAGATCAGT+TGG	-	chr4.2:7312527-7312546	None:intergenic	50.0%
	GGTTGGAAACGAAAACCAGG+AGG	-	chr4.2:7312200-7312219	None:intergenic	50.0%
	TACTGACCTGGCAAATCCCA+AGG	-	chr4.2:7312323-7312342	None:intergenic	50.0%
!	ACCTCAGGAATGATGGAAGC+AGG	-	chr4.2:7312281-7312300	None:intergenic	50.0%
!	AGGAATGATGGAAGCAGGCA+AGG	-	chr4.2:7312276-7312295	None:intergenic	50.0%
!	GAATGATGGAAGCAGGCAAG+GGG	-	chr4.2:7312274-7312293	None:intergenic	50.0%
!	GGAATGATGGAAGCAGGCAA+GGG	-	chr4.2:7312275-7312294	None:intergenic	50.0%
!!!	GAGGCACTTTTTCAGCTCCA+AGG	+	chr4.2:7312798-7312817	MS.gene063280:CDS	50.0%
	GCCTGCTTCCATCATTCCTG+AGG	+	chr4.2:7312277-7312296	MS.gene063280:CDS	55.0%
	GGAGTGAGTAGATTGCCTCC+TGG	+	chr4.2:7312182-7312201	MS.gene063280:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	7312155	7313048	7312155	ID=MS.gene063280
chr4.2	mRNA	7312155	7313048	7312155	ID=MS.gene063280.t1;Parent=MS.gene063280
chr4.2	exon	7312155	7312335	7312155	ID=MS.gene063280.t1.exon1;Parent=MS.gene063280.t1
chr4.2	CDS	7312155	7312335	7312155	ID=cds.MS.gene063280.t1;Parent=MS.gene063280.t1
chr4.2	exon	7312779	7312916	7312779	ID=MS.gene063280.t1.exon2;Parent=MS.gene063280.t1
chr4.2	CDS	7312779	7312916	7312779	ID=cds.MS.gene063280.t1;Parent=MS.gene063280.t1
chr4.2	exon	7312963	7313048	7312963	ID=MS.gene063280.t1.exon3;Parent=MS.gene063280.t1
chr4.2	CDS	7312963	7313048	7312963	ID=cds.MS.gene063280.t1;Parent=MS.gene063280.t1

Gene Sequence

>MS.gene063280

ATGGATAAGCTGAATTTTATTAAAAATGGAGTGAGTAGATTGCCTCCTGGTTTTCGTTTCCAACCAACAGATGAAGAGCTTGTGTTTAATTATTTGAAATGTAAAATCTTCTCATGCCCCTTGCCTGCTTCCATCATTCCTGAGGTCAATGTTTGCAAGTATGATCCTTGGGATTTGCCAGGTCAGTAACTAATAACAAATTAATACTACACCCGGGTCTAACTCATTTTCACAAAACTGATTGGTAAGATGAAAAGTGTTACAATTTGTAAAAAAAAATCAACGTTGGAGTTGAACTTTTCTAAAAAAAAAATTTATGGTAGCCAGGATTTGAATTCCAGACCTTGCATATATTATACATTGTCCCTACCAACTGATCTAAGCTCACGAGGACGAACTTTTTCTAATATATACACATAACATATTGTTCCTTTTTTACACTAAATAATTATATAAAATAAAAGAATCATGCATATATTCGTAATGTACAAAATTACTAACTTAAATCTTATTAACTAGTTTTGGTTTTCATTGTAATAATGCTATATATGATAGCCATTAACAAATAATAAAGGAGAAAAATATTAAGTGATTAACATTGTTTTGTTTGATTGGTATGTATAGGAGGTTGTGATGAACAAGAGAGGCACTTTTTCAGCTCCAAGGAAGCAAAGTATAGAAATAGTAATCGGATGAGTAGAACAACAAAATGTGGATATTGGAAGGCAACAGGGTCAGACAAAAAAATTTCATCTTCAACTTGTAATGGCATTGTAGGGCTAAGAAAAAACTTTGGTTTTCTATGAAGGGAAATCCCCAAATGGGTCTAGAACTGATTGGATCTTGCATGAATATCGCCTCATCAATGTGGAAACTACTAACAACTCAACCCAG

Protein sequence

>MS.gene063280.t1

MDKLNFIKNGVSRLPPGFRFQPTDEELVFNYLKCKIFSCPLPASIIPEVNVCKYDPWDLPGGCDEQERHFFSSKEAKYRNSNRMSRTTKCGYWKATGSDKKISSSTWKSPNGSRTDWILHEYRLINVETTNNSTQ