AlfalfaGEDB | MS.gene063489

M. sativa cultivar XinJiangDaYe / MS.gene063489

KEGG: -
GO: -
PFAM: PF07983.16

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063489.t1	XP_013457984.1	96.3	108	4	0	1	108	1	108	8.40E-53	216.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063489.t1	Q9SD84	62.0	108	39	2	4	110	2	108	9.1e-32	137.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063489.t1	I3SNP7	96.3	108	4	0	1	108	1	108	6.1e-53	216.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050667	MS.gene063489	0.859461	4.07E-63	-1.69E-46
MS.gene052169	MS.gene063489	0.817556	3.10E-52	-1.69E-46
MS.gene054551	MS.gene063489	0.80633	8.67E-50	-1.69E-46
MS.gene054662	MS.gene063489	0.808194	3.49E-50	-1.69E-46
MS.gene055308	MS.gene063489	0.810084	1.37E-50	-1.69E-46
MS.gene055578	MS.gene063489	0.805329	1.41E-49	-1.69E-46
MS.gene055957	MS.gene063489	0.806141	9.50E-50	-1.69E-46
MS.gene056041	MS.gene063489	0.810686	1.02E-50	-1.69E-46
MS.gene05640	MS.gene063489	0.818481	1.92E-52	-1.69E-46
MS.gene05652	MS.gene063489	0.851992	6.18E-61	-1.69E-46
MS.gene057367	MS.gene063489	0.800208	1.61E-48	-1.69E-46
MS.gene057669	MS.gene063489	0.853257	2.69E-61	-1.69E-46
MS.gene058128	MS.gene063489	0.81242	4.28E-51	-1.69E-46
MS.gene059535	MS.gene063489	0.810795	9.65E-51	-1.69E-46
MS.gene06093	MS.gene063489	0.809839	1.55E-50	-1.69E-46
MS.gene060985	MS.gene063489	0.809045	2.30E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063489.t1	MTR_4g109490	95.495	111	5	0	1	111	1	111	2.14e-75	222
MS.gene063489.t1	MTR_5g044530	59.091	110	42	2	3	109	1	110	2.37e-37	127
MS.gene063489.t1	MTR_4g083070	56.757	111	43	4	1	109	1	108	1.29e-35	120
MS.gene063489.t1	MTR_8g085390	48.571	105	53	1	6	109	12	116	8.46e-31	108
MS.gene063489.t1	MTR_8g085440	42.593	108	60	2	1	107	10	116	1.80e-27	97.8
MS.gene063489.t1	MTR_5g078200	50.000	92	44	2	20	109	356	447	1.83e-24	96.7
MS.gene063489.t1	MTR_8g085420	41.228	114	63	3	1	111	10	122	1.87e-24	90.5
MS.gene063489.t1	MTR_5g078200	50.000	92	44	2	20	109	323	414	2.35e-24	96.3
MS.gene063489.t1	MTR_3g065460	50.000	88	42	2	24	109	361	448	1.18e-23	94.4
MS.gene063489.t1	MTR_8g085400	42.308	104	54	3	1	102	10	109	1.34e-23	87.8
MS.gene063489.t1	MTR_1g056640	51.724	87	40	2	24	108	406	492	1.56e-23	94.0
MS.gene063489.t1	MTR_4g069940	45.000	100	52	3	14	110	364	463	3.62e-23	92.8
MS.gene063489.t1	MTR_8g089400	44.211	95	51	2	16	108	29	123	3.74e-23	87.8
MS.gene063489.t1	MTR_4g083500	43.182	88	49	1	24	110	402	489	4.27e-23	92.8
MS.gene063489.t1	MTR_8g089400	44.211	95	51	2	16	108	49	143	4.66e-23	88.2
MS.gene063489.t1	MTR_3g082080	53.012	83	38	1	19	100	152	234	5.66e-23	89.7
MS.gene063489.t1	MTR_4g132280	44.565	92	49	2	20	109	378	469	7.21e-23	92.0
MS.gene063489.t1	MTR_5g085580	49.425	87	42	2	24	108	382	468	1.50e-22	90.9
MS.gene063489.t1	MTR_1g116870	43.820	89	49	1	19	106	271	359	1.99e-22	89.7
MS.gene063489.t1	MTR_5g097420	42.982	114	57	4	1	106	1	114	2.22e-22	84.7
MS.gene063489.t1	MTR_8g085720	48.387	93	46	2	20	110	360	452	4.00e-22	89.7
MS.gene063489.t1	MTR_1g084820	55.696	79	33	2	23	100	419	496	1.18e-21	88.6
MS.gene063489.t1	MTR_1g084820	55.696	79	33	2	23	100	419	496	2.30e-21	87.8
MS.gene063489.t1	MTR_3g083580	48.387	93	46	2	20	110	358	450	3.15e-21	87.4
MS.gene063489.t1	MTR_4g133735	41.346	104	57	3	6	106	10	112	4.42e-21	81.3
MS.gene063489.t1	MTR_1g022160	44.681	94	51	1	14	106	381	474	5.82e-21	86.7
MS.gene063489.t1	MTR_3g116510	44.211	95	51	2	14	106	226	320	7.27e-21	85.1
MS.gene063489.t1	MTR_3g116510	44.211	95	51	2	14	106	360	454	1.00e-20	85.9
MS.gene063489.t1	MTR_7g111600	47.674	86	42	3	24	107	160	244	1.51e-20	83.6
MS.gene063489.t1	MTR_7g111600	47.674	86	42	3	24	107	160	244	2.14e-20	83.6
MS.gene063489.t1	MTR_1g022160	43.617	94	52	1	14	106	381	474	2.84e-20	84.7
MS.gene063489.t1	MTR_4g079530	47.126	87	44	2	24	108	37	123	3.84e-20	79.3
MS.gene063489.t1	MTR_7g111600	47.674	86	42	3	24	107	160	244	4.21e-20	83.2
MS.gene063489.t1	MTR_4g079530	47.126	87	44	2	24	108	37	123	4.70e-20	80.5
MS.gene063489.t1	MTR_1g031900	44.944	89	47	2	24	110	361	449	2.08e-19	82.4
MS.gene063489.t1	MTR_5g015720	48.454	97	46	4	14	106	318	414	2.50e-19	81.6
MS.gene063489.t1	MTR_1g031900	43.820	89	48	2	20	106	357	445	2.55e-19	82.0
MS.gene063489.t1	MTR_2g049670	47.126	87	44	2	24	109	158	243	2.80e-19	80.9
MS.gene063489.t1	MTR_4g133730	36.111	108	67	2	1	106	5	112	4.82e-19	76.3
MS.gene063489.t1	MTR_5g091650	43.617	94	50	3	18	109	102	194	6.34e-19	77.8
MS.gene063489.t1	MTR_5g091650	43.158	95	51	3	18	110	102	195	6.59e-19	79.3
MS.gene063489.t1	MTR_1g022160	44.828	87	47	1	14	99	381	467	7.01e-19	80.9
MS.gene063489.t1	MTR_8g102340	42.353	85	47	2	24	106	334	418	2.75e-18	79.0
MS.gene063489.t1	MTR_7g026340	35.870	92	58	1	14	104	355	446	4.84e-17	75.5
MS.gene063489.t1	MTR_6g088885	38.372	86	50	2	24	106	369	454	5.29e-17	75.5
MS.gene063489.t1	MTR_2g072500	42.857	84	46	2	24	106	8	90	8.48e-16	67.4
MS.gene063489.t1	MTR_3g048280	40.659	91	51	3	18	106	106	195	1.36e-15	69.3
MS.gene063489.t1	MTR_8g012400	37.931	87	52	2	24	108	374	460	4.09e-15	70.1
MS.gene063489.t1	MTR_1g053320	43.023	86	45	3	24	107	374	457	5.29e-14	67.0
MS.gene063489.t1	MTR_8g012400	37.931	87	52	2	24	108	294	380	6.12e-14	66.6
MS.gene063489.t1	MTR_8g088120	44.872	78	41	2	35	111	60	136	1.06e-13	64.7
MS.gene063489.t1	MTR_7g053500	34.615	104	58	3	15	108	280	383	1.43e-13	65.5
MS.gene063489.t1	MTR_7g053500	34.615	104	58	3	15	108	357	460	1.59e-13	65.5
MS.gene063489.t1	MTR_8g092070	41.860	86	46	3	24	107	375	458	2.42e-13	65.1
MS.gene063489.t1	MTR_3g031770	41.573	89	47	4	21	107	361	446	2.71e-13	64.7
MS.gene063489.t1	MTR_3g095050	38.372	86	49	3	24	107	373	456	3.56e-13	64.3
MS.gene063489.t1	MTR_4g088155	37.931	87	52	2	24	108	373	459	8.64e-12	60.5
MS.gene063489.t1	MTR_4g112025	38.372	86	49	4	24	107	374	457	2.74e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063489.t1	AT1G18650	63.303	109	38	2	4	111	2	109	7.63e-46	144
MS.gene063489.t1	AT1G18650	62.963	108	38	2	4	110	2	108	1.72e-44	143
MS.gene063489.t1	AT5G61130	62.921	89	32	1	20	107	17	105	5.45e-37	124
MS.gene063489.t1	AT5G08000	59.223	103	41	1	6	107	22	124	8.54e-37	124
MS.gene063489.t1	AT5G08000	64.045	89	31	1	20	107	17	105	9.24e-35	118
MS.gene063489.t1	AT2G03505	51.613	93	42	2	20	109	17	109	1.69e-30	105
MS.gene063489.t1	AT2G03505	51.613	93	42	2	20	109	17	109	2.59e-30	106
MS.gene063489.t1	AT2G03505	51.613	93	42	2	20	109	17	109	2.59e-30	106
MS.gene063489.t1	AT2G03505	51.613	93	42	2	20	109	17	109	2.59e-30	106
MS.gene063489.t1	AT1G69295	50.526	95	47	0	8	102	1	95	7.57e-28	101
MS.gene063489.t1	AT4G13600	50.538	93	45	1	21	112	58	150	1.75e-27	100
MS.gene063489.t1	AT1G69295	49.485	97	47	1	6	102	5	99	7.03e-27	99.4
MS.gene063489.t1	AT1G79480	47.191	89	46	1	19	106	305	393	1.30e-25	99.0
MS.gene063489.t1	AT1G79480	47.191	89	46	1	19	106	306	394	1.37e-25	99.0
MS.gene063489.t1	AT5G24318	47.727	88	45	1	20	106	229	316	1.87e-25	97.4
MS.gene063489.t1	AT1G26450	50.575	87	43	0	8	94	5	91	5.40e-25	93.6
MS.gene063489.t1	AT5G24318	46.154	91	48	1	20	109	368	458	7.00e-25	97.4
MS.gene063489.t1	AT2G30933	44.643	112	58	4	2	110	59	169	8.29e-25	94.0
MS.gene063489.t1	AT1G13830	48.864	88	42	2	22	106	19	106	1.22e-23	90.1
MS.gene063489.t1	AT1G13830	48.864	88	42	2	22	106	33	120	1.49e-23	90.5
MS.gene063489.t1	AT5G24318	47.619	84	43	1	20	102	368	451	1.96e-23	93.6
MS.gene063489.t1	AT1G11820	45.556	90	47	2	24	111	381	470	3.65e-23	92.8
MS.gene063489.t1	AT2G01630	48.889	90	44	2	24	111	360	449	4.47e-23	92.8
MS.gene063489.t1	AT4G34480	46.067	89	47	1	20	107	249	337	1.22e-22	90.9
MS.gene063489.t1	AT4G34480	46.067	89	47	1	20	107	360	448	1.38e-22	91.3
MS.gene063489.t1	AT4G05430	41.414	99	56	2	16	112	15	113	1.54e-22	85.9
MS.gene063489.t1	AT2G05790	49.425	87	42	2	24	108	384	470	2.19e-22	90.5
MS.gene063489.t1	AT4G05430	41.414	99	56	2	16	112	40	138	2.63e-22	85.9
MS.gene063489.t1	AT2G30933	46.078	102	51	4	2	100	59	159	2.97e-22	85.5
MS.gene063489.t1	AT2G30933	46.078	102	51	4	2	100	59	159	2.97e-22	85.5
MS.gene063489.t1	AT4G09467	35.780	109	69	1	1	108	8	116	1.74e-21	82.4
MS.gene063489.t1	AT4G09464	35.780	109	69	1	1	108	8	116	1.74e-21	82.4
MS.gene063489.t1	AT4G09465	35.780	109	69	1	1	108	8	116	1.84e-21	82.4
MS.gene063489.t1	AT4G26830	48.276	87	43	2	24	108	367	453	2.55e-21	87.4
MS.gene063489.t1	AT4G26830	48.276	87	43	2	24	108	371	457	2.79e-21	87.4
MS.gene063489.t1	AT5G35740	42.424	99	54	3	11	106	17	115	3.46e-21	81.6
MS.gene063489.t1	AT2G16230	42.697	89	50	1	20	107	362	450	4.51e-21	87.0
MS.gene063489.t1	AT4G09090	33.945	109	71	1	1	108	8	116	6.35e-21	80.9
MS.gene063489.t1	AT4G09462	37.383	107	63	2	6	108	8	114	7.25e-21	80.9
MS.gene063489.t1	AT3G55430	39.560	91	52	2	19	106	359	449	1.09e-20	85.9
MS.gene063489.t1	AT5G55180	47.126	87	44	2	24	108	372	458	1.23e-20	85.5
MS.gene063489.t1	AT1G11820	48.101	79	39	2	24	100	381	459	1.41e-20	85.5
MS.gene063489.t1	AT3G58100	43.182	88	48	2	24	109	41	128	1.69e-20	81.6
MS.gene063489.t1	AT4G09466	33.945	109	71	1	1	108	8	116	2.03e-20	79.7
MS.gene063489.t1	AT2G01630	47.619	84	42	2	20	101	356	439	3.31e-20	84.3
MS.gene063489.t1	AT1G66250	43.182	88	48	2	24	109	368	455	3.50e-20	84.3
MS.gene063489.t1	AT5G67460	47.059	85	43	2	24	106	293	377	3.69e-20	84.0
MS.gene063489.t1	AT1G09460	47.727	88	43	3	20	106	133	218	3.78e-20	83.6
MS.gene063489.t1	AT1G29380	47.778	90	44	3	23	110	147	235	3.93e-20	82.4
MS.gene063489.t1	AT4G05430	43.678	87	47	2	16	100	40	126	4.39e-20	79.3
MS.gene063489.t1	AT3G58100	43.182	88	48	2	24	109	117	204	4.69e-20	82.0
MS.gene063489.t1	AT1G66852	37.615	109	62	4	3	106	2	109	1.21e-19	77.8
MS.gene063489.t1	AT1G29380	47.674	86	42	3	23	106	147	231	1.43e-19	81.6
MS.gene063489.t1	AT5G67460	49.367	79	38	2	24	100	293	371	3.00e-19	81.3
MS.gene063489.t1	AT5G55180	50.633	79	37	2	24	100	372	450	4.94e-19	81.3
MS.gene063489.t1	AT1G29380	50.000	80	37	3	23	100	147	225	7.43e-19	78.6
MS.gene063489.t1	AT1G29380	50.000	80	37	3	23	100	147	225	7.43e-19	78.6
MS.gene063489.t1	AT1G66870	36.697	109	64	3	3	106	2	110	8.81e-19	75.5
MS.gene063489.t1	AT2G39640	38.462	91	55	1	21	110	457	547	1.06e-18	80.5
MS.gene063489.t1	AT2G39640	38.542	96	58	1	13	107	348	443	1.94e-18	79.7
MS.gene063489.t1	AT5G63240	41.573	89	48	2	24	108	40	128	1.15e-18	75.5
MS.gene063489.t1	AT1G66870	36.190	105	61	3	8	106	33	137	1.78e-18	75.5
MS.gene063489.t1	AT4G29360	40.909	88	50	2	21	106	398	485	3.55e-18	79.0
MS.gene063489.t1	AT4G29360	40.909	88	50	2	21	106	388	475	4.13e-18	78.6
MS.gene063489.t1	AT2G04910	39.175	97	55	3	13	106	4	99	5.03e-18	73.2
MS.gene063489.t1	AT5G63225	41.935	93	51	2	17	106	16	108	8.30e-18	72.8
MS.gene063489.t1	AT5G63230	40.476	84	49	1	24	106	26	109	1.19e-17	72.4
MS.gene063489.t1	AT3G13560	46.154	91	47	2	21	109	359	449	2.05e-17	76.6
MS.gene063489.t1	AT3G13560	46.154	91	47	2	21	109	359	449	2.05e-17	76.6
MS.gene063489.t1	AT3G13560	46.154	91	47	2	21	109	359	449	2.05e-17	76.6
MS.gene063489.t1	AT3G13560	46.154	91	47	2	21	109	359	449	2.05e-17	76.6
MS.gene063489.t1	AT3G13560	46.154	91	47	2	21	109	359	449	2.05e-17	76.6
MS.gene063489.t1	AT1G66855	35.000	100	61	3	9	106	13	110	4.47e-17	71.2
MS.gene063489.t1	AT2G04910	40.659	91	50	3	13	100	4	93	5.83e-17	71.2
MS.gene063489.t1	AT5G63250	40.449	89	49	2	24	108	42	130	3.20e-16	69.3
MS.gene063489.t1	AT2G29735	32.110	109	71	2	1	106	8	116	1.48e-15	67.4
MS.gene063489.t1	AT5G56590	37.647	85	51	2	24	106	369	453	7.31e-15	69.3
MS.gene063489.t1	AT4G16165	33.333	111	65	4	3	106	2	110	8.07e-15	65.5
MS.gene063489.t1	AT2G43670	34.091	88	56	2	20	106	31	117	2.82e-14	64.3
MS.gene063489.t1	AT1G78520	35.294	85	53	2	24	107	32	115	3.77e-14	63.5
MS.gene063489.t1	AT5G53610	31.532	111	70	3	1	106	1	110	8.30e-14	62.8
MS.gene063489.t1	AT3G23770	40.816	98	55	3	14	108	376	473	1.90e-13	65.5
MS.gene063489.t1	AT5G53600	37.500	72	44	1	35	106	41	111	1.93e-13	61.6
MS.gene063489.t1	AT3G07320	37.931	87	52	2	24	108	371	457	8.68e-13	63.5
MS.gene063489.t1	AT4G14080	33.645	107	61	3	12	108	369	475	2.65e-12	62.0
MS.gene063489.t1	AT2G43660	33.333	90	58	2	19	106	30	119	1.42e-11	57.4
MS.gene063489.t1	AT2G43660	33.333	90	58	2	19	106	29	118	1.43e-11	57.4
MS.gene063489.t1	AT2G42930	37.209	86	48	3	18	100	34	116	4.49e-11	56.2

Find 25 sgRNAs with CRISPR-Local

Find 43 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAATGAGCTCTAACGGTGTT+TGG	0.235083	8.4:+18110201	None:intergenic
GTGCTTGTTGACCCTTCTTC+TGG	0.287043	8.4:+18110154	None:intergenic
TGACATATGTAGGTGCTAAT+TGG	0.376958	8.4:-18110332	MS.gene063489:intron
TTGGACTATGCTTGTGGAGC+TGG	0.394023	8.4:-18110267	MS.gene063489:CDS
AATGAGCTCTAACGGTGTTT+GGG	0.405145	8.4:+18110202	None:intergenic
TCTTGATGAGCAGGTGTTAG+TGG	0.412133	8.4:-18109993	MS.gene063489:intron
AATTTAAACCTGGCACTTGA+AGG	0.429774	8.4:+18109960	None:intergenic
GCACTGGCTTGTGACTTTGC+AGG	0.430148	8.4:-18110135	MS.gene063489:CDS
GTGCCTACCCTTCAAGTGCC+AGG	0.455839	8.4:-18109968	MS.gene063489:intron
GAATAGCTATTACCAGAAGA+AGG	0.510643	8.4:-18110166	MS.gene063489:CDS
ACTTGAAGGAATGGCGGTGA+AGG	0.520742	8.4:+18110530	None:intergenic
TGCTAATTGGTGCGTGTGCA+AGG	0.528841	8.4:-18110319	MS.gene063489:CDS
AGAGTAGTTACTTGAAGGAA+TGG	0.538541	8.4:+18110521	None:intergenic
AATTGGTGCGTGTGCAAGGA+TGG	0.547293	8.4:-18110315	MS.gene063489:CDS
ATTTAAACCTGGCACTTGAA+GGG	0.550247	8.4:+18109961	None:intergenic
TGCAATCTTACAAAAGACCT+TGG	0.568888	8.4:-18110286	MS.gene063489:CDS
GAAGAAGGGTCAACAAGCAC+TGG	0.571335	8.4:-18110151	MS.gene063489:CDS
ACGGTGTTTGGGTTGTAACA+AGG	0.576603	8.4:+18110213	None:intergenic
AAACCTGGCACTTGAAGGGT+AGG	0.578796	8.4:+18109965	None:intergenic
CTTGAAGGAATGGCGGTGAA+GGG	0.580427	8.4:+18110531	None:intergenic
ATAGCTGCAATGAGCTCTAA+CGG	0.591747	8.4:+18110194	None:intergenic
AATAGCTATTACCAGAAGAA+GGG	0.608399	8.4:-18110165	MS.gene063489:CDS
AAGACCTTGGACTATGCTTG+TGG	0.615068	8.4:-18110273	MS.gene063489:CDS
AGCTCCACAAGCATAGTCCA+AGG	0.629352	8.4:+18110269	None:intergenic
GTAGTTACTTGAAGGAATGG+CGG	0.700102	8.4:+18110524	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TACTTTTGTTTATCATAATA+GGG	-	chr8.4:18110565-18110584	MS.gene063489:CDS	15.0%
!!!	TTACTTTTGTTTATCATAAT+AGG	-	chr8.4:18110564-18110583	MS.gene063489:CDS	15.0%
!!!	TTAGCTACAATTATTTTAAA+AGG	+	chr8.4:18110344-18110363	None:intergenic	15.0%
!!	TAGAGAAAAAAATTTAAACC+TGG	+	chr8.4:18110441-18110460	None:intergenic	20.0%
!	AAGGAAAAACAAGAAAGAAA+AGG	+	chr8.4:18110325-18110344	None:intergenic	25.0%
!	AGTAATGTCACAAAAAAACA+TGG	-	chr8.4:18109986-18110005	MS.gene063489:intron	25.0%
!	GCATTTGAAAAATGAAAAGA+AGG	+	chr8.4:18109908-18109927	None:intergenic	25.0%
!!	TTGTAGCTAACTCTTTTTAT+TGG	-	chr8.4:18110354-18110373	MS.gene063489:intron	25.0%
!!!	TCTTTTCATTTTTCAAATGC+TGG	-	chr8.4:18109908-18109927	MS.gene063489:intron	25.0%
!!!	TGTGTTTTTGAAGAATCTTA+TGG	-	chr8.4:18110521-18110540	MS.gene063489:intron	25.0%
	AAGAATCTTATGGACAATAG+TGG	-	chr8.4:18110531-18110550	MS.gene063489:intron	30.0%
	AATAGCTATTACCAGAAGAA+GGG	-	chr8.4:18110223-18110242	MS.gene063489:CDS	30.0%
	GGTGAAAATGAGTATTTACT+TGG	+	chr8.4:18110304-18110323	None:intergenic	30.0%
	TCTCAAACTTTGACATATGT+AGG	-	chr8.4:18110046-18110065	MS.gene063489:intron	30.0%
	AATTTAAACCTGGCACTTGA+AGG	+	chr8.4:18110431-18110450	None:intergenic	35.0%
	AGAGTAGTTACTTGAAGGAA+TGG	+	chr8.4:18109870-18109889	None:intergenic	35.0%
	ATTTAAACCTGGCACTTGAA+GGG	+	chr8.4:18110430-18110449	None:intergenic	35.0%
	GAAAAGAAGGAAGATCTGAA+TGG	+	chr8.4:18109895-18109914	None:intergenic	35.0%
	GAATAGCTATTACCAGAAGA+AGG	-	chr8.4:18110222-18110241	MS.gene063489:CDS	35.0%
	TCTATTTGTTCTTGATGAGC+AGG	-	chr8.4:18110386-18110405	MS.gene063489:intron	35.0%
	TGACATATGTAGGTGCTAAT+TGG	-	chr8.4:18110056-18110075	MS.gene063489:intron	35.0%
	TGCAATCTTACAAAAGACCT+TGG	-	chr8.4:18110102-18110121	MS.gene063489:intron	35.0%
	TGGTTAGAGTAGTTACTTGA+AGG	+	chr8.4:18109875-18109894	None:intergenic	35.0%
	GTAGTTACTTGAAGGAATGG+CGG	+	chr8.4:18109867-18109886	None:intergenic	40.0%
!	AATGAGCTCTAACGGTGTTT+GGG	+	chr8.4:18110189-18110208	None:intergenic	40.0%
!	ATAGCTGCAATGAGCTCTAA+CGG	+	chr8.4:18110197-18110216	None:intergenic	40.0%
	AAGACCTTGGACTATGCTTG+TGG	-	chr8.4:18110115-18110134	MS.gene063489:CDS	45.0%
	TCTTGATGAGCAGGTGTTAG+TGG	-	chr8.4:18110395-18110414	MS.gene063489:intron	45.0%
!	CAATGAGCTCTAACGGTGTT+TGG	+	chr8.4:18110190-18110209	None:intergenic	45.0%
!!	ACGGTGTTTGGGTTGTAACA+AGG	+	chr8.4:18110178-18110197	None:intergenic	45.0%
!!!	AAGGAGCGTTTTGACGAAGA+GGG	+	chr8.4:18110159-18110178	None:intergenic	45.0%
	AAACCTGGCACTTGAAGGGT+AGG	+	chr8.4:18110426-18110445	None:intergenic	50.0%
	AATTGGTGCGTGTGCAAGGA+TGG	-	chr8.4:18110073-18110092	MS.gene063489:intron	50.0%
	ACTTGAAGGAATGGCGGTGA+AGG	+	chr8.4:18109861-18109880	None:intergenic	50.0%
	AGCTCCACAAGCATAGTCCA+AGG	+	chr8.4:18110122-18110141	None:intergenic	50.0%
	CTTGAAGGAATGGCGGTGAA+GGG	+	chr8.4:18109860-18109879	None:intergenic	50.0%
	GAAGAAGGGTCAACAAGCAC+TGG	-	chr8.4:18110237-18110256	MS.gene063489:CDS	50.0%
	TGCTAATTGGTGCGTGTGCA+AGG	-	chr8.4:18110069-18110088	MS.gene063489:intron	50.0%
	TTGGACTATGCTTGTGGAGC+TGG	-	chr8.4:18110121-18110140	MS.gene063489:CDS	50.0%
!	GTGCTTGTTGACCCTTCTTC+TGG	+	chr8.4:18110237-18110256	None:intergenic	50.0%
!!!	CAAGGAGCGTTTTGACGAAG+AGG	+	chr8.4:18110160-18110179	None:intergenic	50.0%
!!	GCACTGGCTTGTGACTTTGC+AGG	-	chr8.4:18110253-18110272	MS.gene063489:CDS	55.0%
	GTGCCTACCCTTCAAGTGCC+AGG	-	chr8.4:18110420-18110439	MS.gene063489:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.4	gene	18109818	18110592	18109818	ID=MS.gene063489
chr8.4	mRNA	18109818	18110592	18109818	ID=MS.gene063489.t1;Parent=MS.gene063489
chr8.4	exon	18110532	18110592	18110532	ID=MS.gene063489.t1.exon1;Parent=MS.gene063489.t1
chr8.4	CDS	18110532	18110592	18110532	ID=cds.MS.gene063489.t1;Parent=MS.gene063489.t1
chr8.4	exon	18110106	18110342	18110106	ID=MS.gene063489.t1.exon2;Parent=MS.gene063489.t1
chr8.4	CDS	18110106	18110342	18110106	ID=cds.MS.gene063489.t1;Parent=MS.gene063489.t1
chr8.4	exon	18109969	18110002	18109969	ID=MS.gene063489.t1.exon3;Parent=MS.gene063489.t1
chr8.4	CDS	18109969	18110002	18109969	ID=cds.MS.gene063489.t1;Parent=MS.gene063489.t1
chr8.4	exon	18109818	18109824	18109818	ID=MS.gene063489.t1.exon4;Parent=MS.gene063489.t1
chr8.4	CDS	18109818	18109824	18109818	ID=cds.MS.gene063489.t1;Parent=MS.gene063489.t1

Gene Sequence

>MS.gene063489

ATGGCTTTTGCTACTCTTGCTCTTGTACTTCTTCTTTTGCCCTTCACCGCCATTCCTTCAAGTAACTACTCTAACCATTCAGATCTTCCTTCTTTTCATTTTTCAAATGCTGGATCTATTTTTGTCTCACAAAATCTTTAAACTAGAGACACTTATCTAACTTGTTTGAGTAATGTCACAAAAAAACATGGAACATTTTCAACATAGTACTGTTATTAACATATTTTGTCTCAAACTTTGACATATGTAGGTGCTAATTGGTGCGTGTGCAAGGATGGAGCTGATGCAATCTTACAAAAGACCTTGGACTATGCTTGTGGAGCTGGAGCTGACTGTAACCCTCTTCGTCAAAACGCTCCTTGTTACAACCCAAACACCGTTAGAGCTCATTGCAGCTATGCTGTGAATAGCTATTACCAGAAGAAGGGTCAACAAGCACTGGCTTGTGACTTTGCAGGAACAGCTACTGTTGTCACATCTGATCCAAGTAAATACTCATTTTCACCTTTTCTTTCTTGTTTTTCCTTTTAAAATAATTGTAGCTAACTCTTTTTATTGGTTTTTTCTTTCTATTTGTTCTTGATGAGCAGGTGTTAGTGGCTGTGCCTACCCTTCAAGTGCCAGGTTTAAATTTTTTTCTCTAAGAACACATGTTTTTGTTTAGTTTCATGATTTAGTTTTGTTTGAATGTTTAACATTGTTATGTGTTTTTGAAGAATCTTATGGACAATAGTGGTGTCTTTTATTTACTTTTGTTTATCATAATAGGGACTGA

Protein sequence

>MS.gene063489.t1

MAFATLALVLLLLPFTAIPSSANWCVCKDGADAILQKTLDYACGAGADCNPLRQNAPCYNPNTVRAHCSYAVNSYYQKKGQQALACDFAGTATVVTSDPSVSGCAYPSSARD