Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06406.t1 | XP_003602620.1 | 99.7 | 340 | 1 | 0 | 1 | 340 | 3 | 342 | 6.70E-178 | 633.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06406.t1 | Q941R4 | 78.1 | 338 | 69 | 1 | 1 | 338 | 1 | 333 | 8.9e-139 | 494.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06406.t1 | G7JBL1 | 99.7 | 340 | 1 | 0 | 1 | 340 | 3 | 342 | 4.8e-178 | 633.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene06406 | 0.909737 | 4.09E-82 | -1.69E-46 |
| MS.gene050945 | MS.gene06406 | 0.806332 | 8.66E-50 | -1.69E-46 |
| MS.gene051043 | MS.gene06406 | 0.804675 | 1.93E-49 | -1.69E-46 |
| MS.gene054222 | MS.gene06406 | 0.80475 | 1.86E-49 | -1.69E-46 |
| MS.gene054413 | MS.gene06406 | 0.81453 | 1.47E-51 | -1.69E-46 |
| MS.gene054892 | MS.gene06406 | 0.812001 | 5.28E-51 | -1.69E-46 |
| MS.gene054893 | MS.gene06406 | 0.820444 | 6.84E-53 | -1.69E-46 |
| MS.gene054957 | MS.gene06406 | 0.863695 | 2.07E-64 | -1.69E-46 |
| MS.gene05624 | MS.gene06406 | 0.801366 | 9.32E-49 | -1.69E-46 |
| MS.gene057622 | MS.gene06406 | 0.80449 | 2.11E-49 | -1.69E-46 |
| MS.gene058592 | MS.gene06406 | 0.810875 | 9.27E-51 | -1.69E-46 |
| MS.gene05952 | MS.gene06406 | 0.819738 | 9.92E-53 | -1.69E-46 |
| MS.gene05985 | MS.gene06406 | -0.80425 | 2.36E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene06406 | 0.821535 | 3.83E-53 | -1.69E-46 |
| MS.gene060935 | MS.gene06406 | 0.8041 | 2.54E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene06406 | 0.824306 | 8.67E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06406.t1 | MTR_3g096310 | 99.706 | 340 | 1 | 0 | 1 | 340 | 3 | 342 | 0.0 | 683 |
| MS.gene06406.t1 | MTR_3g096310 | 99.653 | 288 | 1 | 0 | 1 | 288 | 3 | 290 | 0.0 | 583 |
| MS.gene06406.t1 | MTR_8g442650 | 99.600 | 250 | 1 | 0 | 1 | 250 | 3 | 252 | 0.0 | 506 |
| MS.gene06406.t1 | MTR_3g096310 | 100.000 | 226 | 0 | 0 | 115 | 340 | 1 | 226 | 2.14e-162 | 452 |
| MS.gene06406.t1 | MTR_3g096310 | 100.000 | 211 | 0 | 0 | 130 | 340 | 1 | 211 | 2.62e-151 | 424 |
| MS.gene06406.t1 | MTR_3g463360 | 60.526 | 342 | 123 | 2 | 5 | 334 | 57 | 398 | 2.34e-148 | 424 |
| MS.gene06406.t1 | MTR_5g005320 | 93.671 | 79 | 1 | 1 | 262 | 340 | 1 | 75 | 3.31e-42 | 141 |
| MS.gene06406.t1 | MTR_3g072380 | 23.432 | 303 | 216 | 6 | 37 | 333 | 14 | 306 | 5.90e-16 | 78.2 |
| MS.gene06406.t1 | MTR_1g030320 | 22.772 | 303 | 218 | 5 | 37 | 333 | 13 | 305 | 2.88e-15 | 76.3 |
| MS.gene06406.t1 | MTR_4g113270 | 25.000 | 304 | 211 | 6 | 43 | 339 | 18 | 311 | 3.82e-13 | 69.7 |
| MS.gene06406.t1 | MTR_4g113270 | 25.000 | 304 | 211 | 6 | 43 | 339 | 18 | 311 | 3.90e-13 | 69.7 |
| MS.gene06406.t1 | MTR_3g072380 | 24.725 | 182 | 129 | 3 | 37 | 213 | 14 | 192 | 1.02e-11 | 64.3 |
| MS.gene06406.t1 | MTR_2g085160 | 25.217 | 230 | 164 | 2 | 107 | 335 | 47 | 269 | 2.61e-11 | 63.5 |
| MS.gene06406.t1 | MTR_2g085160 | 25.217 | 230 | 164 | 2 | 107 | 335 | 106 | 328 | 2.74e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06406.t1 | AT2G13650 | 78.107 | 338 | 69 | 1 | 1 | 338 | 1 | 333 | 0.0 | 518 |
| MS.gene06406.t1 | AT2G13650 | 78.107 | 338 | 69 | 1 | 1 | 338 | 1 | 333 | 0.0 | 518 |
| MS.gene06406.t1 | AT2G13650 | 77.083 | 288 | 61 | 1 | 1 | 288 | 1 | 283 | 1.86e-153 | 432 |
| MS.gene06406.t1 | AT2G13650 | 77.083 | 288 | 61 | 1 | 1 | 288 | 1 | 283 | 1.86e-153 | 432 |
| MS.gene06406.t1 | AT2G13650 | 84.332 | 217 | 34 | 0 | 122 | 338 | 28 | 244 | 2.15e-126 | 362 |
| MS.gene06406.t1 | AT2G13650 | 84.332 | 217 | 34 | 0 | 122 | 338 | 28 | 244 | 2.15e-126 | 362 |
| MS.gene06406.t1 | AT2G13650 | 82.564 | 195 | 34 | 0 | 144 | 338 | 14 | 208 | 2.87e-111 | 322 |
| MS.gene06406.t1 | AT1G07290 | 53.177 | 299 | 113 | 3 | 39 | 334 | 79 | 353 | 1.07e-100 | 301 |
| MS.gene06406.t1 | AT1G21870 | 24.653 | 288 | 197 | 7 | 37 | 316 | 14 | 289 | 1.49e-15 | 77.0 |
| MS.gene06406.t1 | AT4G32272 | 25.217 | 345 | 226 | 8 | 8 | 337 | 17 | 344 | 4.68e-15 | 75.5 |
| MS.gene06406.t1 | AT1G77610 | 23.958 | 288 | 199 | 8 | 37 | 316 | 8 | 283 | 7.20e-14 | 72.0 |
| MS.gene06406.t1 | AT4G32272 | 25.140 | 358 | 235 | 9 | 1 | 337 | 14 | 359 | 1.00e-13 | 71.6 |
| MS.gene06406.t1 | AT5G19980 | 24.916 | 297 | 206 | 6 | 43 | 332 | 19 | 305 | 2.58e-13 | 70.5 |
Find 73 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAACAACCCTTCCATTTC+TGG | 0.079663 | 3.2:-80407870 | None:intergenic |
| TGTATCTATGTTGAGCCTTC+TGG | 0.107830 | 3.2:+80408342 | MS.gene06406:CDS |
| GATGAACATGATGAAGAAAA+AGG | 0.229009 | 3.2:+80407815 | MS.gene06406:CDS |
| GATGACCTTCAGTGGAGTTT+TGG | 0.230548 | 3.2:+80411559 | MS.gene06406:CDS |
| TTGAGATCTCTCCCGGATTT+TGG | 0.239239 | 3.2:-80412170 | None:intergenic |
| CAACACTCTTTCTTTGCCTT+TGG | 0.245089 | 3.2:+80411228 | MS.gene06406:CDS |
| CTTTAAAGTTCCTACTAGTT+TGG | 0.268107 | 3.2:+80411974 | MS.gene06406:CDS |
| TTTGCCATCTGCAGTCTTGT+AGG | 0.269187 | 3.2:+80411909 | MS.gene06406:intron |
| CATAATCAAGCCTTATTATC+TGG | 0.283461 | 3.2:+80407899 | MS.gene06406:CDS |
| TTCTGAGATTACCTAGCTTT+TGG | 0.301861 | 3.2:+80411531 | MS.gene06406:CDS |
| CAGATCATTTCAGCAATAAC+TGG | 0.302251 | 3.2:+80410825 | MS.gene06406:intron |
| ATAAGCAAGTCCAGATAATA+AGG | 0.308574 | 3.2:-80407909 | None:intergenic |
| GTATCTATGTTGAGCCTTCT+GGG | 0.310178 | 3.2:+80408343 | MS.gene06406:CDS |
| AACACTCTTTCTTTGCCTTT+GGG | 0.312536 | 3.2:+80411229 | MS.gene06406:CDS |
| AATGCAAATTGCAGGGCTTT+TGG | 0.315045 | 3.2:+80412126 | MS.gene06406:intron |
| GTTGATTAAAGTCTGGTTTC+CGG | 0.328959 | 3.2:+80408396 | MS.gene06406:CDS |
| CCGGTCAATGTTATATTTGT+TGG | 0.334498 | 3.2:+80408415 | MS.gene06406:CDS |
| ATGTGGTTTCTTCATCAAAC+AGG | 0.337762 | 3.2:+80411605 | MS.gene06406:CDS |
| GCAAAGCAATATACTAAATC+TGG | 0.337794 | 3.2:+80411172 | MS.gene06406:CDS |
| AAACAGGGGCTACAACTTAC+AGG | 0.345308 | 3.2:+80411621 | MS.gene06406:CDS |
| AATATCCTTGATGGTGTATC+AGG | 0.361970 | 3.2:+80408000 | MS.gene06406:CDS |
| AGCACCACGAAGGCAGAGTC+TGG | 0.363622 | 3.2:+80410237 | MS.gene06406:CDS |
| TTAATCAACCTCCATGTTAG+TGG | 0.382334 | 3.2:-80408382 | None:intergenic |
| CAGCCCAGACTCTGCCTTCG+TGG | 0.401927 | 3.2:-80410241 | None:intergenic |
| GTGGATGCAGAATTTCATTT+CGG | 0.402301 | 3.2:+80408312 | MS.gene06406:intron |
| GCTTATTGTCTTTCCTCTTG+TGG | 0.404397 | 3.2:+80407926 | MS.gene06406:CDS |
| CTGGGCTGCTCTATTTCTAA+TGG | 0.414829 | 3.2:+80410256 | MS.gene06406:CDS |
| TGCTAATTACAAGCATGTTT+AGG | 0.418078 | 3.2:+80408440 | MS.gene06406:CDS |
| AAAGAAAGAGGTTCCAGAAA+TGG | 0.421951 | 3.2:+80407857 | MS.gene06406:CDS |
| CATGAAAATGAAGTCTTCTT+CGG | 0.425537 | 3.2:+80407790 | None:intergenic |
| AAGATACCACTCTCAGTTGC+TGG | 0.429416 | 3.2:+80411942 | MS.gene06406:CDS |
| CATGGAGGTTGATTAAAGTC+TGG | 0.433566 | 3.2:+80408389 | MS.gene06406:CDS |
| TAATGCTGGAATATCCTTGA+TGG | 0.436279 | 3.2:+80407991 | MS.gene06406:CDS |
| TTCAGGATTGAGATCTCTCC+CGG | 0.444271 | 3.2:-80412177 | None:intergenic |
| CCTCATTGAAAACAAGCATC+AGG | 0.478139 | 3.2:-80411258 | None:intergenic |
| GCAGAGTTCTCCAAACTAGT+AGG | 0.485666 | 3.2:-80411984 | None:intergenic |
| CCAACAAATATAACATTGAC+CGG | 0.496391 | 3.2:-80408415 | None:intergenic |
| CCGTATCCATGACCCTTCGT+AGG | 0.502069 | 3.2:-80411150 | None:intergenic |
| GAAATACATTAATGTGGCTA+TGG | 0.516838 | 3.2:+80410151 | MS.gene06406:CDS |
| CCTACGAAGGGTCATGGATA+CGG | 0.527759 | 3.2:+80411150 | MS.gene06406:CDS |
| TGGTTAGTGATGACCTTCAG+TGG | 0.534587 | 3.2:+80411551 | MS.gene06406:CDS |
| GCTGACCCTACGAAGGGTCA+TGG | 0.537855 | 3.2:+80411144 | MS.gene06406:intron |
| AACTAAAATCATTCCACAAG+AGG | 0.562641 | 3.2:-80407939 | None:intergenic |
| CGTATCCATGACCCTTCGTA+GGG | 0.564291 | 3.2:-80411149 | None:intergenic |
| TTTCGCTAGAGCCAAAATCC+GGG | 0.569283 | 3.2:+80412159 | MS.gene06406:CDS |
| AAAGAGGTTCCAGAAATGGA+AGG | 0.572735 | 3.2:+80407861 | MS.gene06406:CDS |
| TAGTAGGAACTTTAAAGAGA+AGG | 0.579923 | 3.2:-80411968 | None:intergenic |
| GTCATCACTAACCAAAAGCT+AGG | 0.580842 | 3.2:-80411542 | None:intergenic |
| TTTCAACTGAACCACTAACA+TGG | 0.581249 | 3.2:+80408371 | MS.gene06406:CDS |
| TGTGGTTTCTTCATCAAACA+GGG | 0.587936 | 3.2:+80411606 | MS.gene06406:CDS |
| GCACCACGAAGGCAGAGTCT+GGG | 0.591892 | 3.2:+80410238 | MS.gene06406:CDS |
| ATCATTTCAGCAATAACTGG+AGG | 0.613231 | 3.2:+80410828 | MS.gene06406:CDS |
| CAGTTTGAAATACATTAATG+TGG | 0.616131 | 3.2:+80410145 | MS.gene06406:intron |
| TCATTTCAGCAATAACTGGA+GGG | 0.623711 | 3.2:+80410829 | MS.gene06406:CDS |
| AAGCTAGGTAATCTCAGAAG+TGG | 0.624340 | 3.2:-80411527 | None:intergenic |
| AGGATGCCAGCAACTGAGAG+TGG | 0.626159 | 3.2:-80411948 | None:intergenic |
| TATTGCAGCTGACCCTACGA+AGG | 0.633946 | 3.2:+80411137 | MS.gene06406:intron |
| AAATTTAAATGAGTTTACGA+TGG | 0.641617 | 3.2:+80411195 | MS.gene06406:CDS |
| TAGACCCAAAACTCCACTGA+AGG | 0.641650 | 3.2:-80411564 | None:intergenic |
| TTAATGCAACTGGCTATGTG+TGG | 0.643415 | 3.2:+80410868 | MS.gene06406:CDS |
| AAGAGGTTCCAGAAATGGAA+GGG | 0.648638 | 3.2:+80407862 | MS.gene06406:CDS |
| AATTACCTGATACACCATCA+AGG | 0.651962 | 3.2:-80408005 | None:intergenic |
| CAGTTGAAACTAAACCCAGA+AGG | 0.657499 | 3.2:-80408357 | None:intergenic |
| CAATTAGCTTCACCTCCATG+TGG | 0.658205 | 3.2:+80411588 | MS.gene06406:CDS |
| ATTGCAGCTGACCCTACGAA+GGG | 0.668006 | 3.2:+80411138 | MS.gene06406:intron |
| GAACAAGTACATTTCACCAA+CGG | 0.669904 | 3.2:-80410210 | None:intergenic |
| AGCATCAGGAAAATTCCCAA+AGG | 0.675180 | 3.2:-80411244 | None:intergenic |
| ACGAATGTCATAACTGCCGT+TGG | 0.688649 | 3.2:+80410194 | MS.gene06406:CDS |
| TGTTTGATGAAGAAACCACA+TGG | 0.697962 | 3.2:-80411603 | None:intergenic |
| GTGGTTTCTTCATCAAACAG+GGG | 0.705100 | 3.2:+80411607 | MS.gene06406:CDS |
| CAACTGAACCACTAACATGG+AGG | 0.707867 | 3.2:+80408374 | MS.gene06406:CDS |
| TTGTTCAGTAAGCACCACGA+AGG | 0.728813 | 3.2:+80410227 | MS.gene06406:CDS |
| TTGATGAAGAAACCACATGG+AGG | 0.813768 | 3.2:-80411600 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTACTATAAATATTTTTT+AGG | + | chr3.2:80410672-80410691 | MS.gene06406:intron | 10.0% |
| !! | ATTATTTATGATAAGATACT+AGG | + | chr3.2:80409631-80409650 | MS.gene06406:intron | 15.0% |
| !! | CAAAAATATTTATGTTTAAG+AGG | - | chr3.2:80409262-80409281 | None:intergenic | 15.0% |
| !! | TTATTTATGATAAGATACTA+GGG | + | chr3.2:80409632-80409651 | MS.gene06406:intron | 15.0% |
| !!! | AAACATAAATATTTTTGTGA+CGG | + | chr3.2:80409265-80409284 | MS.gene06406:intron | 15.0% |
| !!! | ATTTTATTTCTCTACTTTTT+AGG | + | chr3.2:80410471-80410490 | MS.gene06406:intron | 15.0% |
| !!! | CTTTTCTAATTATTGTTTAT+TGG | + | chr3.2:80409755-80409774 | MS.gene06406:intron | 15.0% |
| !!! | TATTTTCATATGATAATGTT+TGG | + | chr3.2:80408601-80408620 | MS.gene06406:intron | 15.0% |
| !!! | TCCAATTTAATATATTGATT+GGG | - | chr3.2:80411738-80411757 | None:intergenic | 15.0% |
| !! | AAATTAAATTTGTCGCATTT+AGG | - | chr3.2:80411704-80411723 | None:intergenic | 20.0% |
| !! | AAATTTAAATGAGTTTACGA+TGG | + | chr3.2:80411195-80411214 | MS.gene06406:CDS | 20.0% |
| !! | ATTAATGTATTTCAATTGAC+AGG | + | chr3.2:80411504-80411523 | MS.gene06406:intron | 20.0% |
| !! | ATTTAAAAACATGAGATGTT+TGG | - | chr3.2:80410773-80410792 | None:intergenic | 20.0% |
| !! | GTCCAATTTAATATATTGAT+TGG | - | chr3.2:80411739-80411758 | None:intergenic | 20.0% |
| !! | TAAAACCAAATCCATATTAA+TGG | - | chr3.2:80409593-80409612 | None:intergenic | 20.0% |
| !! | TCCCAATCAATATATTAAAT+TGG | + | chr3.2:80411734-80411753 | MS.gene06406:intron | 20.0% |
| !! | TCTAATTATTGTTTATTGGT+AGG | + | chr3.2:80409759-80409778 | MS.gene06406:intron | 20.0% |
| !! | TCTCAAACTTAATAACTAAT+AGG | - | chr3.2:80408889-80408908 | None:intergenic | 20.0% |
| !! | TTAAAAAAAGTAGTAGTATG+CGG | + | chr3.2:80409860-80409879 | MS.gene06406:intron | 20.0% |
| !! | TTGCAAAACGAAAAAATATA+GGG | - | chr3.2:80411467-80411486 | None:intergenic | 20.0% |
| !! | TTTGCAAAACGAAAAAATAT+AGG | - | chr3.2:80411468-80411487 | None:intergenic | 20.0% |
| !!! | AATAATTTTCTTTTTGCTGA+TGG | + | chr3.2:80409817-80409836 | MS.gene06406:intron | 20.0% |
| !!! | ATAATTTTCTTTTTGCTGAT+GGG | + | chr3.2:80409818-80409837 | MS.gene06406:intron | 20.0% |
| !!! | ATAATTTTTCTGATATAGCA+CGG | - | chr3.2:80411859-80411878 | None:intergenic | 20.0% |
| !!! | ATAGTTTAATGATGATGTAA+AGG | + | chr3.2:80408278-80408297 | MS.gene06406:intron | 20.0% |
| !!! | TAAAATGAAAGTACAATAGA+GGG | + | chr3.2:80409160-80409179 | MS.gene06406:intron | 20.0% |
| !!! | TTAAAATGAAAGTACAATAG+AGG | + | chr3.2:80409159-80409178 | MS.gene06406:intron | 20.0% |
| !!! | TTAATTTGTTTATCCAAACA+AGG | + | chr3.2:80408863-80408882 | MS.gene06406:intron | 20.0% |
| !!! | TTTTTAGGTTACATAAATGA+TGG | + | chr3.2:80410486-80410505 | MS.gene06406:intron | 20.0% |
| ! | AGAAATAGCTTATACATAAG+TGG | - | chr3.2:80408119-80408138 | None:intergenic | 25.0% |
| ! | ATGAACATGATGAAGAAAAA+GGG | + | chr3.2:80407816-80407835 | MS.gene06406:CDS | 25.0% |
| ! | ATTAGATTTCAAAAAACTGG+AGG | - | chr3.2:80409719-80409738 | None:intergenic | 25.0% |
| ! | CAACTATATCATACTCAATT+TGG | - | chr3.2:80410574-80410593 | None:intergenic | 25.0% |
| ! | CATTAAACTATACAGATCTA+AGG | - | chr3.2:80408269-80408288 | None:intergenic | 25.0% |
| ! | GAGAAATAAAATATTTCCCA+CGG | - | chr3.2:80410463-80410482 | None:intergenic | 25.0% |
| ! | GAGATTAGATTTCAAAAAAC+TGG | - | chr3.2:80409722-80409741 | None:intergenic | 25.0% |
| ! | GTTCAATAGTTAGAGATAAA+AGG | + | chr3.2:80409536-80409555 | MS.gene06406:intron | 25.0% |
| ! | TACAATAAAGCAGTATATGT+TGG | - | chr3.2:80410422-80410441 | None:intergenic | 25.0% |
| ! | TCTTGCTTAAATTCTACATT+TGG | - | chr3.2:80409191-80409210 | None:intergenic | 25.0% |
| ! | TTTAAGCAAGATAGATGAAA+TGG | + | chr3.2:80409200-80409219 | MS.gene06406:intron | 25.0% |
| !! | AAAATGAAAGTACAATAGAG+GGG | + | chr3.2:80409161-80409180 | MS.gene06406:intron | 25.0% |
| !! | AAAGCATTAAAGAGAAGTTA+GGG | + | chr3.2:80409419-80409438 | MS.gene06406:intron | 25.0% |
| !! | ATTTTTCCAGTCTCAATTTA+TGG | + | chr3.2:80410046-80410065 | MS.gene06406:intron | 25.0% |
| !! | CAGTTTGAAATACATTAATG+TGG | + | chr3.2:80410145-80410164 | MS.gene06406:intron | 25.0% |
| !! | TAATTTTCTATGAGATTGAG+TGG | + | chr3.2:80409305-80409324 | MS.gene06406:intron | 25.0% |
| !! | TAGTTATTAAGTTTGAGATG+TGG | + | chr3.2:80408891-80408910 | MS.gene06406:intron | 25.0% |
| !! | TCATATGATAATGTTTGGAT+TGG | + | chr3.2:80408606-80408625 | MS.gene06406:intron | 25.0% |
| !!! | AAACACTATTCCTATTTTTG+GGG | + | chr3.2:80409960-80409979 | MS.gene06406:intron | 25.0% |
| !!! | GAAACACTATTCCTATTTTT+GGG | + | chr3.2:80409959-80409978 | MS.gene06406:intron | 25.0% |
| !!! | TCTAGTTATGATTTTAATGC+TGG | + | chr3.2:80407977-80407996 | MS.gene06406:CDS | 25.0% |
| !!! | TGTTTTACCTTTTTAAGTTC+TGG | + | chr3.2:80410359-80410378 | MS.gene06406:intron | 25.0% |
| AAAATAGGAATAGTGTTTCC+TGG | - | chr3.2:80409958-80409977 | None:intergenic | 30.0% | |
| AAACAAGCCAGAACTTAAAA+AGG | - | chr3.2:80410369-80410388 | None:intergenic | 30.0% | |
| AAATTGTCAGACTTGTAATC+TGG | - | chr3.2:80408997-80409016 | None:intergenic | 30.0% | |
| AACTAAAATCATTCCACAAG+AGG | - | chr3.2:80407942-80407961 | None:intergenic | 30.0% | |
| AATAAGCCATTTATCCAAAC+AGG | - | chr3.2:80408078-80408097 | None:intergenic | 30.0% | |
| AATTGGACTTCGTGAATAAT+AGG | + | chr3.2:80411751-80411770 | MS.gene06406:intron | 30.0% | |
| ACAAGTTTGTGTTACATTCT+TGG | + | chr3.2:80412085-80412104 | MS.gene06406:intron | 30.0% | |
| ACATTATTCCACATCAAAGT+GGG | - | chr3.2:80410332-80410351 | None:intergenic | 30.0% | |
| AGAAGAAAACACAGAAAAAG+GGG | - | chr3.2:80408044-80408063 | None:intergenic | 30.0% | |
| AGAGAAGAAAACACAGAAAA+AGG | - | chr3.2:80408046-80408065 | None:intergenic | 30.0% | |
| AGCTTATACATAAGTGGTTA+TGG | - | chr3.2:80408113-80408132 | None:intergenic | 30.0% | |
| ATAAGCAAGTCCAGATAATA+AGG | - | chr3.2:80407912-80407931 | None:intergenic | 30.0% | |
| ATATGTCAATCATCTTCCAA+AGG | + | chr3.2:80408518-80408537 | MS.gene06406:intron | 30.0% | |
| ATGATTTCACAGACAAAATG+TGG | - | chr3.2:80411315-80411334 | None:intergenic | 30.0% | |
| ATTGTTTATTGGTAGGTACT+AGG | + | chr3.2:80409766-80409785 | MS.gene06406:intron | 30.0% | |
| CAATAGTTAGAGATAAAAGG+AGG | + | chr3.2:80409539-80409558 | MS.gene06406:intron | 30.0% | |
| CCAAACCATTAATATGGATT+TGG | + | chr3.2:80409585-80409604 | MS.gene06406:intron | 30.0% | |
| CCAAATCCATATTAATGGTT+TGG | - | chr3.2:80409588-80409607 | None:intergenic | 30.0% | |
| CCAACAAATATAACATTGAC+CGG | - | chr3.2:80408418-80408437 | None:intergenic | 30.0% | |
| GAAATACATTAATGTGGCTA+TGG | + | chr3.2:80410151-80410170 | MS.gene06406:CDS | 30.0% | |
| GAGAAGAAAACACAGAAAAA+GGG | - | chr3.2:80408045-80408064 | None:intergenic | 30.0% | |
| GATGAACATGATGAAGAAAA+AGG | + | chr3.2:80407815-80407834 | MS.gene06406:CDS | 30.0% | |
| GATTCCATTTATGAGTATTC+TGG | + | chr3.2:80409895-80409914 | MS.gene06406:intron | 30.0% | |
| GCAAAGCAATATACTAAATC+TGG | + | chr3.2:80411172-80411191 | MS.gene06406:CDS | 30.0% | |
| GTAAAGCACATATCCAAAAT+TGG | - | chr3.2:80410751-80410770 | None:intergenic | 30.0% | |
| GTAAATCCATAAATTGAGAC+TGG | - | chr3.2:80410055-80410074 | None:intergenic | 30.0% | |
| GTCTGTGAAATCATTATATG+AGG | + | chr3.2:80411321-80411340 | MS.gene06406:intron | 30.0% | |
| TAACATTGAAGAGTTTCAAG+TGG | - | chr3.2:80410708-80410727 | None:intergenic | 30.0% | |
| TACACCAGAATACTCATAAA+TGG | - | chr3.2:80409902-80409921 | None:intergenic | 30.0% | |
| TACATTATTCCACATCAAAG+TGG | - | chr3.2:80410333-80410352 | None:intergenic | 30.0% | |
| TATGTCAATCATCTTCCAAA+GGG | + | chr3.2:80408519-80408538 | MS.gene06406:intron | 30.0% | |
| TCAAATAAGTCAATCCAATC+AGG | + | chr3.2:80408242-80408261 | MS.gene06406:intron | 30.0% | |
| TGATTTCACAGACAAAATGT+GGG | - | chr3.2:80411314-80411333 | None:intergenic | 30.0% | |
| TGCTAATTACAAGCATGTTT+AGG | + | chr3.2:80408440-80408459 | MS.gene06406:CDS | 30.0% | |
| TTAACAGATGAGGTTTAGTT+TGG | + | chr3.2:80411035-80411054 | MS.gene06406:intron | 30.0% | |
| TTGGAAAAAAGCAAAGAAAG+AGG | + | chr3.2:80407845-80407864 | MS.gene06406:CDS | 30.0% | |
| TTTACACTTCTTAACAGATG+AGG | + | chr3.2:80411025-80411044 | MS.gene06406:intron | 30.0% | |
| TTTATCTGAAGAGCCATAAT+TGG | - | chr3.2:80411661-80411680 | None:intergenic | 30.0% | |
| ! | AAATGAAAGTACAATAGAGG+GGG | + | chr3.2:80409162-80409181 | MS.gene06406:intron | 30.0% |
| ! | AACTCTGCTAGCATTTTATT+TGG | + | chr3.2:80411999-80412018 | MS.gene06406:CDS | 30.0% |
| ! | ACAAACAAAAAGCACATTTC+TGG | - | chr3.2:80411415-80411434 | None:intergenic | 30.0% |
| ! | ACTGTTTTCACAAGATATCT+TGG | - | chr3.2:80408743-80408762 | None:intergenic | 30.0% |
| ! | GGAAACACTATTCCTATTTT+TGG | + | chr3.2:80409958-80409977 | MS.gene06406:intron | 30.0% |
| ! | GTATGAAGTCTTTAACTTTG+AGG | + | chr3.2:80408462-80408481 | MS.gene06406:intron | 30.0% |
| ! | TAGTAGGAACTTTAAAGAGA+AGG | - | chr3.2:80411971-80411990 | None:intergenic | 30.0% |
| ! | TGCTTTATTGTAGTTTCCAA+AGG | + | chr3.2:80410430-80410449 | MS.gene06406:intron | 30.0% |
| ! | TGTAAAGGTTCATACTTTTG+TGG | + | chr3.2:80408293-80408312 | MS.gene06406:intron | 30.0% |
| ! | TGTGTTTTCTTCTCTAACTT+AGG | + | chr3.2:80408051-80408070 | MS.gene06406:intron | 30.0% |
| !! | AATAACTAATAGGCCTTGTT+TGG | - | chr3.2:80408879-80408898 | None:intergenic | 30.0% |
| !! | CATAATCAAGCCTTATTATC+TGG | + | chr3.2:80407899-80407918 | MS.gene06406:CDS | 30.0% |
| !! | CTTTAAAGTTCCTACTAGTT+TGG | + | chr3.2:80411974-80411993 | MS.gene06406:CDS | 30.0% |
| !! | GAAAGCATTAAAGAGAAGTT+AGG | + | chr3.2:80409418-80409437 | MS.gene06406:intron | 30.0% |
| !! | TGAAGTTGAATTGGTGTTTT+AGG | + | chr3.2:80410510-80410529 | MS.gene06406:intron | 30.0% |
| !!! | ATTTTATTTGAAGAGCATCC+AGG | - | chr3.2:80411006-80411025 | None:intergenic | 30.0% |
| AAAGAAAGAGGTTCCAGAAA+TGG | + | chr3.2:80407857-80407876 | MS.gene06406:CDS | 35.0% | |
| AACACTCTTTCTTTGCCTTT+GGG | + | chr3.2:80411229-80411248 | MS.gene06406:CDS | 35.0% | |
| AAGGTAGAAATGCAAATTGC+AGG | + | chr3.2:80412118-80412137 | MS.gene06406:intron | 35.0% | |
| AATGATAAGAGTCTCAGCTT+CGG | + | chr3.2:80409447-80409466 | MS.gene06406:intron | 35.0% | |
| AATGATGGCTGAAGTTGAAT+TGG | + | chr3.2:80410501-80410520 | MS.gene06406:intron | 35.0% | |
| AATTACCTGATACACCATCA+AGG | - | chr3.2:80408008-80408027 | None:intergenic | 35.0% | |
| AGGTAGAAATGCAAATTGCA+GGG | + | chr3.2:80412119-80412138 | MS.gene06406:intron | 35.0% | |
| ATAACACACAATTTCGGAAG+TGG | + | chr3.2:80408916-80408935 | MS.gene06406:intron | 35.0% | |
| ATATAGTTGCGAGACAGTTA+CGG | + | chr3.2:80410585-80410604 | MS.gene06406:intron | 35.0% | |
| ATCATTTCAGCAATAACTGG+AGG | + | chr3.2:80410828-80410847 | MS.gene06406:CDS | 35.0% | |
| ATGTCAATCATCTTCCAAAG+GGG | + | chr3.2:80408520-80408539 | MS.gene06406:intron | 35.0% | |
| ATGTGGTTTCTTCATCAAAC+AGG | + | chr3.2:80411605-80411624 | MS.gene06406:CDS | 35.0% | |
| ATTATTCCACATCAAAGTGG+GGG | - | chr3.2:80410330-80410349 | None:intergenic | 35.0% | |
| CACGTAGTTAAAGATGACAT+AGG | - | chr3.2:80411355-80411374 | None:intergenic | 35.0% | |
| CAGATCATTTCAGCAATAAC+TGG | + | chr3.2:80410825-80410844 | MS.gene06406:intron | 35.0% | |
| CATTATTCCACATCAAAGTG+GGG | - | chr3.2:80410331-80410350 | None:intergenic | 35.0% | |
| CCGGTCAATGTTATATTTGT+TGG | + | chr3.2:80408415-80408434 | MS.gene06406:CDS | 35.0% | |
| GAAATGATCTGCAAGTGAAA+GGG | - | chr3.2:80410816-80410835 | None:intergenic | 35.0% | |
| GAACAAGTACATTTCACCAA+CGG | - | chr3.2:80410213-80410232 | None:intergenic | 35.0% | |
| GAGTATTACAGTAGAAGAGT+GGG | + | chr3.2:80409368-80409387 | MS.gene06406:intron | 35.0% | |
| GTGGAGATAACACACAATTT+CGG | + | chr3.2:80408910-80408929 | MS.gene06406:intron | 35.0% | |
| GTGGATGCAGAATTTCATTT+CGG | + | chr3.2:80408312-80408331 | MS.gene06406:intron | 35.0% | |
| GTGGTCAGAAATTCCAATTA+TGG | + | chr3.2:80411645-80411664 | MS.gene06406:intron | 35.0% | |
| TAATGCTGGAATATCCTTGA+TGG | + | chr3.2:80407991-80408010 | MS.gene06406:CDS | 35.0% | |
| TCATTTCAGCAATAACTGGA+GGG | + | chr3.2:80410829-80410848 | MS.gene06406:CDS | 35.0% | |
| TGAAATGATCTGCAAGTGAA+AGG | - | chr3.2:80410817-80410836 | None:intergenic | 35.0% | |
| TGAAGAAAAAGGGAAGTTGT+TGG | + | chr3.2:80407826-80407845 | MS.gene06406:CDS | 35.0% | |
| TGTGGTTTCTTCATCAAACA+GGG | + | chr3.2:80411606-80411625 | MS.gene06406:CDS | 35.0% | |
| TGTTTGATGAAGAAACCACA+TGG | - | chr3.2:80411606-80411625 | None:intergenic | 35.0% | |
| TTAATCAACCTCCATGTTAG+TGG | - | chr3.2:80408385-80408404 | None:intergenic | 35.0% | |
| TTAGGTCCTGTTTGGATAAA+TGG | + | chr3.2:80408069-80408088 | MS.gene06406:intron | 35.0% | |
| TTGATGTTTGGGAATACTCA+GGG | + | chr3.2:80410608-80410627 | MS.gene06406:intron | 35.0% | |
| TTTCAACTGAACCACTAACA+TGG | + | chr3.2:80408371-80408390 | MS.gene06406:CDS | 35.0% | |
| TTTGATTAATGTCCCCATCA+TGG | + | chr3.2:80409660-80409679 | MS.gene06406:intron | 35.0% | |
| ! | ACATATCCAAAATTGGTGCT+TGG | - | chr3.2:80410744-80410763 | None:intergenic | 35.0% |
| ! | AGAGTATTACAGTAGAAGAG+TGG | + | chr3.2:80409367-80409386 | MS.gene06406:intron | 35.0% |
| ! | GATCTCTCTTTTAATGCAAC+TGG | + | chr3.2:80410858-80410877 | MS.gene06406:CDS | 35.0% |
| ! | GTTGATTAAAGTCTGGTTTC+CGG | + | chr3.2:80408396-80408415 | MS.gene06406:CDS | 35.0% |
| ! | TGATGTATTTTGTGACAGAG+AGG | + | chr3.2:80409234-80409253 | MS.gene06406:intron | 35.0% |
| !! | AATATCCTTGATGGTGTATC+AGG | + | chr3.2:80408000-80408019 | MS.gene06406:CDS | 35.0% |
| !!! | TTCTGAGATTACCTAGCTTT+TGG | + | chr3.2:80411531-80411550 | MS.gene06406:CDS | 35.0% |
| AAAGAGGTTCCAGAAATGGA+AGG | + | chr3.2:80407861-80407880 | MS.gene06406:CDS | 40.0% | |
| AACAACAACCCTTCCATTTC+TGG | - | chr3.2:80407873-80407892 | None:intergenic | 40.0% | |
| AAGAGGTTCCAGAAATGGAA+GGG | + | chr3.2:80407862-80407881 | MS.gene06406:CDS | 40.0% | |
| AAGCTAGGTAATCTCAGAAG+TGG | - | chr3.2:80411530-80411549 | None:intergenic | 40.0% | |
| AATGTCCCCATCATGGAAAA+TGG | + | chr3.2:80409667-80409686 | MS.gene06406:intron | 40.0% | |
| ACATGTTCGTAAGCTGTGTT+TGG | + | chr3.2:80408699-80408718 | MS.gene06406:intron | 40.0% | |
| AGCATCAGGAAAATTCCCAA+AGG | - | chr3.2:80411247-80411266 | None:intergenic | 40.0% | |
| CAACACTCTTTCTTTGCCTT+TGG | + | chr3.2:80411228-80411247 | MS.gene06406:CDS | 40.0% | |
| CAGTTGAAACTAAACCCAGA+AGG | - | chr3.2:80408360-80408379 | None:intergenic | 40.0% | |
| CCATGGCCAAACCATTAATA+TGG | + | chr3.2:80409579-80409598 | MS.gene06406:intron | 40.0% | |
| CCTCATTGAAAACAAGCATC+AGG | - | chr3.2:80411261-80411280 | None:intergenic | 40.0% | |
| CTATTGAACATGCTCCAACT+AGG | - | chr3.2:80409525-80409544 | None:intergenic | 40.0% | |
| CTTTATGCTGATATTCGTCC+AGG | + | chr3.2:80409937-80409956 | MS.gene06406:intron | 40.0% | |
| GCAGATGGCAAACTAGTTAT+TGG | - | chr3.2:80411901-80411920 | None:intergenic | 40.0% | |
| GCTTATTGTCTTTCCTCTTG+TGG | + | chr3.2:80407926-80407945 | MS.gene06406:CDS | 40.0% | |
| GTATCTATGTTGAGCCTTCT+GGG | + | chr3.2:80408343-80408362 | MS.gene06406:CDS | 40.0% | |
| GTCATCACTAACCAAAAGCT+AGG | - | chr3.2:80411545-80411564 | None:intergenic | 40.0% | |
| GTGGTTTCTTCATCAAACAG+GGG | + | chr3.2:80411607-80411626 | MS.gene06406:CDS | 40.0% | |
| GTTGATGTTTGGGAATACTC+AGG | + | chr3.2:80410607-80410626 | MS.gene06406:intron | 40.0% | |
| TACAGATCTAAGGACCTGAT+TGG | - | chr3.2:80408259-80408278 | None:intergenic | 40.0% | |
| TCTCTAACTTAGGTCCTGTT+TGG | + | chr3.2:80408061-80408080 | MS.gene06406:intron | 40.0% | |
| TGTATCTATGTTGAGCCTTC+TGG | + | chr3.2:80408342-80408361 | MS.gene06406:CDS | 40.0% | |
| TTAATGCAACTGGCTATGTG+TGG | + | chr3.2:80410868-80410887 | MS.gene06406:CDS | 40.0% | |
| TTAGAGATAAAAGGAGGCCA+AGG | + | chr3.2:80409545-80409564 | MS.gene06406:intron | 40.0% | |
| TTGATGAAGAAACCACATGG+AGG | - | chr3.2:80411603-80411622 | None:intergenic | 40.0% | |
| TTGCTTACATCTCCTACAAC+CGG | + | chr3.2:80410388-80410407 | MS.gene06406:intron | 40.0% | |
| ! | AAAGTGAAGCACCTGTAAGA+TGG | + | chr3.2:80409495-80409514 | MS.gene06406:intron | 40.0% |
| ! | AAGTGAAGCACCTGTAAGAT+GGG | + | chr3.2:80409496-80409515 | MS.gene06406:intron | 40.0% |
| ! | AATGCAAATTGCAGGGCTTT+TGG | + | chr3.2:80412126-80412145 | MS.gene06406:intron | 40.0% |
| ! | AGACAGTTACGGTTGATGTT+TGG | + | chr3.2:80410596-80410615 | MS.gene06406:intron | 40.0% |
| ! | AGCTGCTTTCGTAAGTTATC+TGG | + | chr3.2:80408185-80408204 | MS.gene06406:intron | 40.0% |
| ! | ATGACCTTCAGTGGAGTTTT+GGG | + | chr3.2:80411560-80411579 | MS.gene06406:CDS | 40.0% |
| ! | CATGGAGGTTGATTAAAGTC+TGG | + | chr3.2:80408389-80408408 | MS.gene06406:CDS | 40.0% |
| ! | CCATATTAATGGTTTGGCCA+TGG | - | chr3.2:80409582-80409601 | None:intergenic | 40.0% |
| ! | CTTGAACCAAGCACCAATTT+TGG | + | chr3.2:80410735-80410754 | MS.gene06406:intron | 40.0% |
| ! | GACAGTTACGGTTGATGTTT+GGG | + | chr3.2:80410597-80410616 | MS.gene06406:intron | 40.0% |
| ! | GCTGCTTTCGTAAGTTATCT+GGG | + | chr3.2:80408186-80408205 | MS.gene06406:intron | 40.0% |
| ! | TTTTCGCTAGAGCCAAAATC+CGG | + | chr3.2:80412158-80412177 | MS.gene06406:CDS | 40.0% |
| !! | ACCAAAGCCATTTTCCATGA+TGG | - | chr3.2:80409677-80409696 | None:intergenic | 40.0% |
| !! | AGTTGAGTGTGCTGATTAGT+TGG | + | chr3.2:80411100-80411119 | MS.gene06406:intron | 40.0% |
| !! | CAAAGCCATTTTCCATGATG+GGG | - | chr3.2:80409675-80409694 | None:intergenic | 40.0% |
| !! | CCAAAGCCATTTTCCATGAT+GGG | - | chr3.2:80409676-80409695 | None:intergenic | 40.0% |
| !! | CCTGATGCTTGTTTTCAATG+AGG | + | chr3.2:80411258-80411277 | MS.gene06406:CDS | 40.0% |
| AAACAGGGGCTACAACTTAC+AGG | + | chr3.2:80411621-80411640 | MS.gene06406:CDS | 45.0% | |
| AACTAGGCTACCCATCTTAC+AGG | - | chr3.2:80409509-80409528 | None:intergenic | 45.0% | |
| AAGATACCACTCTCAGTTGC+TGG | + | chr3.2:80411942-80411961 | MS.gene06406:CDS | 45.0% | |
| ACGAATGTCATAACTGCCGT+TGG | + | chr3.2:80410194-80410213 | MS.gene06406:CDS | 45.0% | |
| CAACTGAACCACTAACATGG+AGG | + | chr3.2:80408374-80408393 | MS.gene06406:CDS | 45.0% | |
| CATTCTTGGTTCAACGCTGA+AGG | + | chr3.2:80412099-80412118 | MS.gene06406:intron | 45.0% | |
| CCCATCATGGAAAATGGCTT+TGG | + | chr3.2:80409673-80409692 | MS.gene06406:intron | 45.0% | |
| CTTACCATTCTGTTACTGCC+TGG | + | chr3.2:80410985-80411004 | MS.gene06406:intron | 45.0% | |
| CTTGTGTGCTCCCCAAAAAT+AGG | - | chr3.2:80409973-80409992 | None:intergenic | 45.0% | |
| GCAGAGTTCTCCAAACTAGT+AGG | - | chr3.2:80411987-80412006 | None:intergenic | 45.0% | |
| GTATATGTTGGCAACAGCAC+CGG | - | chr3.2:80410410-80410429 | None:intergenic | 45.0% | |
| TAGACCCAAAACTCCACTGA+AGG | - | chr3.2:80411567-80411586 | None:intergenic | 45.0% | |
| TCATCTTCCAAAGGGGATGA+TGG | + | chr3.2:80408527-80408546 | MS.gene06406:intron | 45.0% | |
| TGGTTAGTGATGACCTTCAG+TGG | + | chr3.2:80411551-80411570 | MS.gene06406:CDS | 45.0% | |
| TGTAAGATGGGTAGCCTAGT+TGG | + | chr3.2:80409508-80409527 | MS.gene06406:intron | 45.0% | |
| TTCCAAAGGTCGAATACCGT+GGG | + | chr3.2:80410444-80410463 | MS.gene06406:intron | 45.0% | |
| TTGATACCCCCACTTTGATG+TGG | + | chr3.2:80410321-80410340 | MS.gene06406:intron | 45.0% | |
| TTGTTCAGTAAGCACCACGA+AGG | + | chr3.2:80410227-80410246 | MS.gene06406:CDS | 45.0% | |
| TTTCCAAAGGTCGAATACCG+TGG | + | chr3.2:80410443-80410462 | MS.gene06406:intron | 45.0% | |
| TTTCGCTAGAGCCAAAATCC+GGG | + | chr3.2:80412159-80412178 | MS.gene06406:CDS | 45.0% | |
| ! | CAATTAGCTTCACCTCCATG+TGG | + | chr3.2:80411588-80411607 | MS.gene06406:CDS | 45.0% |
| ! | GATGACCTTCAGTGGAGTTT+TGG | + | chr3.2:80411559-80411578 | MS.gene06406:CDS | 45.0% |
| ! | GGAGGCAGATAATTTGTGAC+TGG | + | chr3.2:80408548-80408567 | MS.gene06406:intron | 45.0% |
| ! | TTGAGATCTCTCCCGGATTT+TGG | - | chr3.2:80412173-80412192 | None:intergenic | 45.0% |
| ! | TTTGCCATCTGCAGTCTTGT+AGG | + | chr3.2:80411909-80411928 | MS.gene06406:intron | 45.0% |
| !! | ACACAAGCTCTGAACTCTTG+AGG | + | chr3.2:80409986-80410005 | MS.gene06406:intron | 45.0% |
| !! | CAAAGTGGGGGTATCAAACA+CGG | - | chr3.2:80410318-80410337 | None:intergenic | 45.0% |
| !! | CTGGGCTGCTCTATTTCTAA+TGG | + | chr3.2:80410256-80410275 | MS.gene06406:CDS | 45.0% |
| AGGAGGCCAAGGAAAACTAG+AGG | + | chr3.2:80409556-80409575 | MS.gene06406:intron | 50.0% | |
| ATTGCAGCTGACCCTACGAA+GGG | + | chr3.2:80411138-80411157 | MS.gene06406:intron | 50.0% | |
| CCAAGGAAAACTAGAGGCCA+TGG | + | chr3.2:80409562-80409581 | MS.gene06406:intron | 50.0% | |
| CCTACGAAGGGTCATGGATA+CGG | + | chr3.2:80411150-80411169 | MS.gene06406:CDS | 50.0% | |
| CGAACCTACAAGACTGCAGA+TGG | - | chr3.2:80411916-80411935 | None:intergenic | 50.0% | |
| CGTATCCATGACCCTTCGTA+GGG | - | chr3.2:80411152-80411171 | None:intergenic | 50.0% | |
| GCATCCAGGCAGTAACAGAA+TGG | - | chr3.2:80410992-80411011 | None:intergenic | 50.0% | |
| TATTGCAGCTGACCCTACGA+AGG | + | chr3.2:80411137-80411156 | MS.gene06406:intron | 50.0% | |
| TTCCCACGGTATTCGACCTT+TGG | - | chr3.2:80410449-80410468 | None:intergenic | 50.0% | |
| ! | CAAATTGCAGGGCTTTTGGC+GGG | + | chr3.2:80412130-80412149 | MS.gene06406:intron | 50.0% |
| ! | GCAAATTGCAGGGCTTTTGG+CGG | + | chr3.2:80412129-80412148 | MS.gene06406:intron | 50.0% |
| ! | TCTTCCAAAGGGGATGATGG+AGG | + | chr3.2:80408530-80408549 | MS.gene06406:intron | 50.0% |
| !!! | CCATGGCCTCTAGTTTTCCT+TGG | - | chr3.2:80409565-80409584 | None:intergenic | 50.0% |
| AGGATGCCAGCAACTGAGAG+TGG | - | chr3.2:80411951-80411970 | None:intergenic | 55.0% | |
| CCGTATCCATGACCCTTCGT+AGG | - | chr3.2:80411153-80411172 | None:intergenic | 55.0% | |
| GGGGCTACAACTTACAGGTG+TGG | + | chr3.2:80411626-80411645 | MS.gene06406:intron | 55.0% | |
| TCTGCCTCCATCATCCCCTT+TGG | - | chr3.2:80408537-80408556 | None:intergenic | 55.0% | |
| !! | TTGGCAACAGCACCGGTTGT+AGG | - | chr3.2:80410403-80410422 | None:intergenic | 55.0% |
| AGCACCACGAAGGCAGAGTC+TGG | + | chr3.2:80410237-80410256 | MS.gene06406:CDS | 60.0% | |
| GCACCACGAAGGCAGAGTCT+GGG | + | chr3.2:80410238-80410257 | MS.gene06406:CDS | 60.0% | |
| GCTGACCCTACGAAGGGTCA+TGG | + | chr3.2:80411144-80411163 | MS.gene06406:intron | 60.0% | |
| CAGCCCAGACTCTGCCTTCG+TGG | - | chr3.2:80410244-80410263 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 80407797 | 80412198 | 80407797 | ID=MS.gene06406 |
| chr3.2 | mRNA | 80407797 | 80412198 | 80407797 | ID=MS.gene06406.t1;Parent=MS.gene06406 |
| chr3.2 | exon | 80407797 | 80408021 | 80407797 | ID=MS.gene06406.t1.exon1;Parent=MS.gene06406.t1 |
| chr3.2 | CDS | 80407797 | 80408021 | 80407797 | ID=cds.MS.gene06406.t1;Parent=MS.gene06406.t1 |
| chr3.2 | exon | 80408322 | 80408461 | 80408322 | ID=MS.gene06406.t1.exon2;Parent=MS.gene06406.t1 |
| chr3.2 | CDS | 80408322 | 80408461 | 80408322 | ID=cds.MS.gene06406.t1;Parent=MS.gene06406.t1 |
| chr3.2 | exon | 80410148 | 80410277 | 80410148 | ID=MS.gene06406.t1.exon3;Parent=MS.gene06406.t1 |
| chr3.2 | CDS | 80410148 | 80410277 | 80410148 | ID=cds.MS.gene06406.t1;Parent=MS.gene06406.t1 |
| chr3.2 | exon | 80410828 | 80410926 | 80410828 | ID=MS.gene06406.t1.exon4;Parent=MS.gene06406.t1 |
| chr3.2 | CDS | 80410828 | 80410926 | 80410828 | ID=cds.MS.gene06406.t1;Parent=MS.gene06406.t1 |
| chr3.2 | exon | 80411145 | 80411299 | 80411145 | ID=MS.gene06406.t1.exon5;Parent=MS.gene06406.t1 |
| chr3.2 | CDS | 80411145 | 80411299 | 80411145 | ID=cds.MS.gene06406.t1;Parent=MS.gene06406.t1 |
| chr3.2 | exon | 80411526 | 80411642 | 80411526 | ID=MS.gene06406.t1.exon6;Parent=MS.gene06406.t1 |
| chr3.2 | CDS | 80411526 | 80411642 | 80411526 | ID=cds.MS.gene06406.t1;Parent=MS.gene06406.t1 |
| chr3.2 | exon | 80411923 | 80412020 | 80411923 | ID=MS.gene06406.t1.exon7;Parent=MS.gene06406.t1 |
| chr3.2 | CDS | 80411923 | 80412020 | 80411923 | ID=cds.MS.gene06406.t1;Parent=MS.gene06406.t1 |
| chr3.2 | exon | 80412140 | 80412198 | 80412140 | ID=MS.gene06406.t1.exon8;Parent=MS.gene06406.t1 |
| chr3.2 | CDS | 80412140 | 80412198 | 80412140 | ID=cds.MS.gene06406.t1;Parent=MS.gene06406.t1 |
| Gene Sequence |
| Protein sequence |
