AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064527

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064527.t1 MTR_6g090280 95.262 591 28 0 13 603 32 622 0.0 1110
MS.gene064527.t1 MTR_6g090280 95.359 474 22 0 130 603 1 474 0.0 938
MS.gene064527.t1 MTR_6g090280 95.395 456 21 0 13 468 32 487 0.0 843
MS.gene064527.t1 MTR_3g087950 52.035 565 258 4 39 602 28 580 0.0 542
MS.gene064527.t1 MTR_3g466000 48.936 564 272 5 40 602 27 575 2.56e-174 514
MS.gene064527.t1 MTR_6g090200 56.995 193 74 2 611 803 27 210 3.59e-72 235
MS.gene064527.t1 MTR_6g090230 85.000 60 9 0 676 735 47 106 5.12e-33 123
MS.gene064527.t1 MTR_5g041010 28.276 145 90 5 651 786 71 210 4.99e-14 72.8
MS.gene064527.t1 MTR_5g040940 29.032 155 95 6 651 795 72 221 6.74e-13 69.3
MS.gene064527.t1 MTR_5g459500 28.148 135 84 5 679 800 6 140 1.21e-11 63.5
MS.gene064527.t1 MTR_2g021910 32.110 109 69 3 672 779 302 406 2.00e-11 68.2
MS.gene064527.t1 MTR_5g084180 56.667 90 38 1 39 128 34 122 2.13e-11 62.4
MS.gene064527.t1 MTR_5g040960 27.703 148 93 5 651 789 73 215 3.38e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064527.t1 AT4G29210 62.014 566 206 3 45 603 73 636 0.0 728
MS.gene064527.t1 AT4G29210 66.353 425 142 1 45 468 73 497 0.0 605
MS.gene064527.t1 AT4G39640 50.000 568 266 6 37 602 19 570 0.0 560
MS.gene064527.t1 AT4G39640 50.000 568 266 6 37 602 19 570 0.0 560
MS.gene064527.t1 AT4G39650 51.175 553 253 5 53 602 38 576 0.0 553
MS.gene064527.t1 AT1G69820 56.818 220 93 1 299 516 1 220 3.07e-83 265
MS.gene064527.t1 AT1G26820 30.137 146 88 5 650 786 65 205 8.03e-14 72.0
MS.gene064527.t1 AT1G14220 33.333 147 87 6 648 786 68 211 6.07e-13 69.7

Find 210 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGATGACCTCTTTCTTTC+AGG 0.132717 6.2:+87959045 None:intergenic
TTGAACATTAATAGGAAAAT+TGG 0.202572 6.2:-87958963 MS.gene064527:CDS
AAACACCTTTGAACATTAAT+AGG 0.206872 6.2:-87958971 MS.gene064527:CDS
GCTGGACAACCGCCCTTTCT+TGG 0.218253 6.2:+87958888 None:intergenic
TTTCTTAATCATTTCATCTT+AGG 0.220225 6.2:-87959280 MS.gene064527:CDS
GACCAATTGGTCGGGGTAAT+TGG 0.230354 6.2:-87959346 MS.gene064527:CDS
ATTAATGTTCAAAGGTGTTT+TGG 0.235557 6.2:+87958974 None:intergenic
CCTAATGGAACTTTGTTAAA+AGG 0.238512 6.2:-87960487 MS.gene064527:CDS
AGGTTGCGAATCTACTAAAA+AGG 0.270647 6.2:-87956663 MS.gene064527:CDS
ACAACTGTAAACAGGCATTT+TGG 0.272133 6.2:-87959671 MS.gene064527:CDS
AATAGTTTGTGCAAAAGATT+TGG 0.289247 6.2:+87959933 None:intergenic
GCCTTGTCGGTGGGAGTTCC+TGG 0.301944 6.2:-87960691 MS.gene064527:CDS
ACTGTGGAAACAGCTTTCTT+TGG 0.313465 6.2:-87956531 MS.gene064527:CDS
AATACCTTTGTAATGATAAT+AGG 0.314574 6.2:+87959500 None:intergenic
CCACGACTTAGTTGCTATAA+TGG 0.323052 6.2:-87956625 MS.gene064527:CDS
GATGCGGCAAAGGGAAATTT+AGG 0.331622 6.2:-87960060 MS.gene064527:CDS
ACCGGAGGTCGCTCCGTTAC+AGG 0.333100 6.2:-87958225 MS.gene064527:CDS
ATGTCGTGTTATCGAGTATT+TGG 0.336114 6.2:+87959905 None:intergenic
TGGGAAAAGCTTAGAGATAT+TGG 0.346608 6.2:-87960437 MS.gene064527:CDS
GATCCCGAAGCTAAGTTCTT+AGG 0.349300 6.2:-87960715 MS.gene064527:CDS
AAAAGATTTGGAAAGCATTT+CGG 0.357293 6.2:+87959945 None:intergenic
CATAACTGTCCAAGATGTTT+AGG 0.357912 6.2:+87960091 None:intergenic
AGAAATATTTATGCACCTAA+TGG 0.361307 6.2:-87960502 MS.gene064527:CDS
CTGGACAACCGCCCTTTCTT+GGG 0.375400 6.2:+87958889 None:intergenic
CTATCTTATGTAGCTATTAC+CGG 0.380165 6.2:-87959141 MS.gene064527:intron
TTGTTTCCTAGCAACTTTAC+CGG 0.385988 6.2:-87957082 MS.gene064527:intron
GTTTGCTATCCGAATGAACT+TGG 0.386944 6.2:-87960004 MS.gene064527:CDS
CGCTCCTTTAGCTGCTTCAC+AGG 0.391297 6.2:-87961414 MS.gene064527:intron
TGGAACACTCGCTCTTTCTC+TGG 0.400127 6.2:-87960233 MS.gene064527:intron
AAATTTCCCTTTGCCGCATC+CGG 0.401484 6.2:+87960063 None:intergenic
TCCTATAGCTGGTTGGAATA+AGG 0.404922 6.2:+87960612 None:intergenic
CTAAACATCTTGGACAGTTA+TGG 0.406327 6.2:-87960090 MS.gene064527:CDS
TCAATAAAGTTTGTTGGAGC+TGG 0.406868 6.2:+87959554 None:intergenic
GTGGCTGCTGCATTATGCGC+TGG 0.410546 6.2:-87961536 MS.gene064527:CDS
TGATTTATTTATACTGCAGC+TGG 0.413156 6.2:+87958870 None:intergenic
TTTGGTTCAATAAAGTTTGT+TGG 0.416128 6.2:+87959548 None:intergenic
GTTGATGCAAATGCTAAGTT+AGG 0.417121 6.2:+87958158 None:intergenic
GGAGTTCCTGGTGAGTTAGC+TGG 0.418179 6.2:-87960679 MS.gene064527:CDS
ATTCCCTCCAGATTACTATA+TGG 0.419853 6.2:-87959884 MS.gene064527:CDS
TGGAGCTGGAGGTAGTTTAT+CGG 0.420316 6.2:+87959568 None:intergenic
TTCAATAACATGTGCCTGAT+TGG 0.423332 6.2:+87961652 None:intergenic
AGAATGTTAGTGCACAAATA+TGG 0.425176 6.2:-87961962 MS.gene064527:CDS
CATGTTATTGAATCGGAACT+TGG 0.426522 6.2:-87961641 MS.gene064527:CDS
CATATCATAAGCTTGTGCTT+TGG 0.431025 6.2:+87961445 None:intergenic
GGCACCTAAGAACTTAGCTT+CGG 0.431120 6.2:+87960711 None:intergenic
CGCCAATTACCCCGACCAAT+TGG 0.433200 6.2:+87959344 None:intergenic
CAGTTGGTGTTTCAATGCTT+AGG 0.435205 6.2:-87961586 MS.gene064527:CDS
CACTGACAACAACTGTAAAC+AGG 0.435211 6.2:-87959679 MS.gene064527:CDS
GGGATTCGTTCTACTTCAAC+TGG 0.435789 6.2:-87959644 MS.gene064527:CDS
TGCAATACAGGGACACAAGC+AGG 0.441253 6.2:-87957043 MS.gene064527:CDS
GCCTGTAACGGAGCGACCTC+CGG 0.443268 6.2:+87958224 None:intergenic
CACCTGTCCATATAGTAATC+TGG 0.445513 6.2:+87959877 None:intergenic
CAACCAAGTCAATGCAATAC+AGG 0.447200 6.2:-87957055 MS.gene064527:CDS
TAAGTTCTTAGGTGCCTTGT+CGG 0.447885 6.2:-87960704 MS.gene064527:CDS
AACCTCCCTTGTTATATAGT+TGG 0.454594 6.2:+87956681 None:intergenic
CATTGCTTTGCAGCCGTCAC+CGG 0.456468 6.2:-87958243 MS.gene064527:intron
GATTTGAAGATCGGTCAGTA+TGG 0.458699 6.2:+87956720 None:intergenic
CAAGCTTCAAGTGGCATTGG+AGG 0.459603 6.2:-87961503 MS.gene064527:CDS
TTCCAAGCTTCAAGTGGCAT+TGG 0.459832 6.2:-87961506 MS.gene064527:CDS
AATGGCAGATTAGTAGCAAT+TGG 0.464870 6.2:-87956607 MS.gene064527:CDS
GTTTCCACAGTTATTATTGA+AGG 0.466416 6.2:+87956543 None:intergenic
ACCTTATTCCAACCAGCTAT+AGG 0.467125 6.2:-87960613 MS.gene064527:CDS
GTGGAAACAGCTTTCTTTGG+TGG 0.469254 6.2:-87956528 MS.gene064527:CDS
ATGTGTAGTAATATAGAACT+TGG 0.470004 6.2:-87960457 MS.gene064527:CDS
ATGATGTGAAGTATGAAAAC+AGG 0.470747 6.2:+87958131 None:intergenic
TAGCTGGCCTTCATGCAGCC+TGG 0.471043 6.2:-87960663 MS.gene064527:CDS
GTTTCAATGCTTAGGCTTGG+TGG 0.472280 6.2:-87961578 MS.gene064527:CDS
GGTAGGATGACCAATTGGTC+GGG 0.472855 6.2:-87959354 MS.gene064527:intron
GGAGCTGGAGGTAGTTTATC+GGG 0.474724 6.2:+87959569 None:intergenic
TTCTTAGGTGCCTTGTCGGT+GGG 0.475216 6.2:-87960700 MS.gene064527:CDS
CTCCAATGCCACTTGAAGCT+TGG 0.477295 6.2:+87961504 None:intergenic
GTCCCTGTATTGCATTGACT+TGG 0.480119 6.2:+87957052 None:intergenic
TTGTTCCATGATCTCTAAGT+TGG 0.481847 6.2:+87959741 None:intergenic
TGGAGCCAACTTAGAGATCA+TGG 0.482237 6.2:-87959746 MS.gene064527:CDS
GGTCTTAGAACGGCGTCTAA+AGG 0.484298 6.2:+87959250 None:intergenic
ATATAGTTGGCCGTTGGACC+AGG 0.485041 6.2:+87956694 None:intergenic
AGTTAGGAAAACTAGAACCA+TGG 0.486965 6.2:+87958174 None:intergenic
AGAAATACTTGAGTCACTGC+TGG 0.487765 6.2:+87959298 None:intergenic
TATTGTCGTCAATGATGAAA+TGG 0.487853 6.2:-87959621 MS.gene064527:CDS
TCGAGCTTTCAGAAGAAAGT+AGG 0.488027 6.2:-87959073 MS.gene064527:CDS
TGGAAACAGCTTTCTTTGGT+GGG 0.490417 6.2:-87956527 MS.gene064527:CDS
TGGACGTCCGGATGCGGCAA+AGG 0.495197 6.2:-87960070 MS.gene064527:CDS
TGAACAGGTCCTAAACATCT+TGG 0.496933 6.2:-87960100 MS.gene064527:intron
ACCAGGCTTGATTTGAAGAT+CGG 0.497308 6.2:+87956711 None:intergenic
GTAAAGGATGTCGCAGAAGT+TGG 0.501496 6.2:-87960364 MS.gene064527:CDS
TGCAGGATGGAAGAGTGGAC+AGG 0.505632 6.2:-87961937 MS.gene064527:CDS
CTTGTTATATAGTTGGCCGT+TGG 0.505968 6.2:+87956688 None:intergenic
GCACCTAAGAACTTAGCTTC+GGG 0.506268 6.2:+87960712 None:intergenic
CAGTGATACCGCATTTCTAT+CGG 0.506581 6.2:+87959697 None:intergenic
TCAGGCACATGTTATTGAAT+CGG 0.506608 6.2:-87961648 MS.gene064527:CDS
CGGCATCTACAACACATGTA+TGG 0.507054 6.2:+87959717 None:intergenic
GGTGTTTCAATGCTTAGGCT+TGG 0.510369 6.2:-87961581 MS.gene064527:CDS
ACCGATCTTCAAATCAAGCC+TGG 0.511034 6.2:-87956712 MS.gene064527:CDS
AGCAGTAAGTGACCCAAGAA+AGG 0.511217 6.2:-87958901 MS.gene064527:CDS
GGCATTTGTGTGGATGCAAA+TGG 0.511375 6.2:-87956586 MS.gene064527:CDS
ACTTTATTGAACCAAACAAA+AGG 0.512088 6.2:-87959541 MS.gene064527:CDS
GCTTCAAGTGGCATTGGAGG+CGG 0.513180 6.2:-87961500 MS.gene064527:CDS
CTCCAGATTACTATATGGAC+AGG 0.513873 6.2:-87959879 MS.gene064527:intron
CTTGGACAGTTATGGACGTC+CGG 0.513907 6.2:-87960082 MS.gene064527:CDS
GCAATGACTGTCAATGTAAT+GGG 0.514126 6.2:-87960289 MS.gene064527:CDS
TGCAATGACTGTCAATGTAA+TGG 0.515938 6.2:-87960290 MS.gene064527:CDS
GTTCTTAGGTGCCTTGTCGG+TGG 0.517069 6.2:-87960701 MS.gene064527:CDS
TGGTAGGATGACCAATTGGT+CGG 0.518968 6.2:-87959355 MS.gene064527:intron
TGCAAACACTAGTAGAAACT+TGG 0.519382 6.2:+87958202 None:intergenic
CTTTACTAACTTCTCACCAA+TGG 0.521616 6.2:+87960381 None:intergenic
TTAGAGATATTGGCCGAGGA+AGG 0.522470 6.2:-87960427 MS.gene064527:CDS
GGGGTAATTGGCGCAAGCGG+TGG 0.523871 6.2:-87959334 MS.gene064527:CDS
AGAACCTTGGTATAGACCCT+TGG 0.525421 6.2:+87959229 None:intergenic
CAAACCTGTGAAGCAGCTAA+AGG 0.526128 6.2:+87961410 None:intergenic
CTAGTGTTTGCATCCGCCCA+TGG 0.527435 6.2:-87958191 MS.gene064527:CDS
GCTAGGTATTCTTCGAGTGT+AGG 0.528040 6.2:+87960562 None:intergenic
ATCAAGTTACTTACATCTTG+TGG 0.528282 6.2:+87957007 None:intergenic
GCTTTCTACAATGGAACCAT+TGG 0.530567 6.2:-87960397 MS.gene064527:CDS
AATGGAACTTTGTTAAAAGG+AGG 0.531771 6.2:-87960484 MS.gene064527:CDS
AGAGCGAGTGTTCCACTTGA+AGG 0.532850 6.2:+87960241 None:intergenic
TAAGAACTTAGCTTCGGGAT+CGG 0.533300 6.2:+87960717 None:intergenic
TTTCCACAGTTATTATTGAA+GGG 0.535981 6.2:+87956544 None:intergenic
TAGACGCCGTTCTAAGACCA+AGG 0.538451 6.2:-87959246 MS.gene064527:CDS
CACAAATATGGTGTGCAGGA+TGG 0.538780 6.2:-87961950 MS.gene064527:CDS
GGACGTCCGGATGCGGCAAA+GGG 0.539848 6.2:-87960069 MS.gene064527:CDS
TTTGCTATCCGAATGAACTT+GGG 0.542750 6.2:-87960003 MS.gene064527:CDS
CAGTTATGGACGTCCGGATG+CGG 0.543584 6.2:-87960076 MS.gene064527:CDS
ATGGAACTTTGTTAAAAGGA+GGG 0.545372 6.2:-87960483 MS.gene064527:CDS
GAAAGCTTGTGGCCCTTCCT+CGG 0.549195 6.2:+87960414 None:intergenic
TGTAATGATAATAGGAGTCA+TGG 0.551561 6.2:+87959508 None:intergenic
TGCTTTGCAGCCGTCACCGG+AGG 0.556113 6.2:-87958240 MS.gene064527:intron
CATGCAGCCTGGTTGAAACA+TGG 0.558759 6.2:-87960652 MS.gene064527:CDS
CGGTCAGTATGGTGAAAAGC+GGG 0.559962 6.2:+87956731 None:intergenic
GTCGGGGTAATTGGCGCAAG+CGG 0.560004 6.2:-87959337 MS.gene064527:CDS
GTTGTTGGGCTAGGAGTAAG+AGG 0.560853 6.2:-87961731 MS.gene064527:CDS
TAGAGATATTGGCCGAGGAA+GGG 0.564292 6.2:-87960426 MS.gene064527:CDS
ACATGCTGTTGATGCTGCAG+TGG 0.566572 6.2:-87961555 MS.gene064527:CDS
GCTTTGGTAGGATGACCAAT+TGG 0.567094 6.2:-87959359 MS.gene064527:intron
GCATTGACTTGGTTGCCCAC+CGG 0.567297 6.2:+87957063 None:intergenic
GCAGTAAGTGACCCAAGAAA+GGG 0.568353 6.2:-87958900 MS.gene064527:CDS
TAGGTTTCTTCGATAAAGCA+AGG 0.571284 6.2:-87956895 MS.gene064527:CDS
CATTGGTGAGAAGTTAGTAA+AGG 0.573031 6.2:-87960380 MS.gene064527:CDS
AAAAGATAATGAGCGATCCT+GGG 0.573268 6.2:-87960528 MS.gene064527:CDS
TTGCTATCCGAATGAACTTG+GGG 0.574297 6.2:-87960002 MS.gene064527:CDS
CAATCTTCCATGTTTCAACC+AGG 0.574776 6.2:+87960645 None:intergenic
TTCCTAGCAACTTTACCGGT+GGG 0.576163 6.2:-87957078 MS.gene064527:intron
TGTGTAGTAATATAGAACTT+GGG 0.577381 6.2:-87960456 MS.gene064527:CDS
ATAAAGTTTGTTGGAGCTGG+AGG 0.577647 6.2:+87959557 None:intergenic
AGTGTTCCACTTGAAGGAGG+TGG 0.579625 6.2:+87960247 None:intergenic
GATGCTCGGTGTTCTGCAGT+TGG 0.579738 6.2:-87961602 MS.gene064527:CDS
GCAGGATGGAAGAGTGGACA+GGG 0.581020 6.2:-87961936 MS.gene064527:CDS
AGCAAGGTCTTAACTACGCG+TGG 0.581811 6.2:-87956879 MS.gene064527:CDS
CAACGGCCAACTATATAACA+AGG 0.582321 6.2:-87956687 MS.gene064527:CDS
AAGGATGTCGCAGAAGTTGG+TGG 0.583060 6.2:-87960361 MS.gene064527:CDS
TGGAACTTTGTTAAAAGGAG+GGG 0.583276 6.2:-87960482 MS.gene064527:CDS
AGTGCACAAATATGGTGTGC+AGG 0.583406 6.2:-87961954 MS.gene064527:CDS
AGTAGAAACTTGGCCTGTAA+CGG 0.583771 6.2:+87958212 None:intergenic
TCGCAAGTCCTATAGCTGGT+TGG 0.585935 6.2:+87960605 None:intergenic
TCAAATCAAGCCTGGTCCAA+CGG 0.585965 6.2:-87956704 MS.gene064527:CDS
AACGGAGCGACCTCCGGTGA+CGG 0.586529 6.2:+87958230 None:intergenic
CCATTATAGCAACTAAGTCG+TGG 0.588062 6.2:+87956625 None:intergenic
GGTTGGAATAAGGTCTTCCA+TGG 0.589767 6.2:+87960622 None:intergenic
GGGCCACAAGCTTTCTACAA+TGG 0.590382 6.2:-87960406 MS.gene064527:CDS
GGAGGATTTACGAAATTACA+AGG 0.592285 6.2:-87960326 MS.gene064527:CDS
GTTCCATTGTAGAAAGCTTG+TGG 0.594214 6.2:+87960403 None:intergenic
CATCAACTGTGTGCATGTCA+AGG 0.594909 6.2:-87959029 MS.gene064527:CDS
GTTAGGAAAACTAGAACCAT+GGG 0.595144 6.2:+87958175 None:intergenic
GTAGGATGACCAATTGGTCG+GGG 0.600898 6.2:-87959353 MS.gene064527:intron
TTGTTGCAGCAGATGATGCT+CGG 0.601090 6.2:-87961616 MS.gene064527:CDS
GTAATGGGATATACTATACA+TGG 0.601724 6.2:-87960274 MS.gene064527:CDS
GGGAGATATATCAGTAGGTG+TGG 0.603874 6.2:+87959589 None:intergenic
TGTGTGGATGCAAATGGAGA+TGG 0.605243 6.2:-87956580 MS.gene064527:CDS
TTTCCTAGCAACTTTACCGG+TGG 0.605679 6.2:-87957079 MS.gene064527:intron
ATACTGGTTGTAGTCTGCGT+AGG 0.606917 6.2:+87956792 None:intergenic
GTTTCAACCAGGCTGCATGA+AGG 0.615001 6.2:+87960656 None:intergenic
GGAATGCCACCTCCTTCAAG+TGG 0.615362 6.2:-87960253 MS.gene064527:CDS
TGAAGGCCAGCTAACTCACC+AGG 0.618272 6.2:+87960673 None:intergenic
AGACGCCGTTCTAAGACCAA+GGG 0.619283 6.2:-87959245 MS.gene064527:CDS
GCATAAATATTTCTTAACCC+AGG 0.620188 6.2:+87960511 None:intergenic
AGTAGCAATTGGCATTTGTG+TGG 0.621434 6.2:-87956596 MS.gene064527:CDS
CATTATAGCAACTAAGTCGT+GGG 0.621624 6.2:+87956626 None:intergenic
ACCAGGAACTCCCACCGACA+AGG 0.623658 6.2:+87960690 None:intergenic
AATCCCTTCAATAATAACTG+TGG 0.623885 6.2:-87956547 MS.gene064527:CDS
GACTCCTATTATCATTACAA+AGG 0.623955 6.2:-87959504 MS.gene064527:intron
TTATCGGGAGATATATCAGT+AGG 0.628198 6.2:+87959584 None:intergenic
AACCAAGTCAATGCAATACA+GGG 0.634201 6.2:-87957054 MS.gene064527:CDS
AAGCTTAGAGATATTGGCCG+AGG 0.639552 6.2:-87960431 MS.gene064527:CDS
GCAATACAGGGACACAAGCA+GGG 0.641412 6.2:-87957042 MS.gene064527:CDS
ATAGACCCTTGGTCTTAGAA+CGG 0.641982 6.2:+87959240 None:intergenic
TCTAAACAATGGGATACTCA+TGG 0.645478 6.2:-87956823 MS.gene064527:CDS
TCGGTCAGTATGGTGAAAAG+CGG 0.647678 6.2:+87956730 None:intergenic
GCGAGTGTTCCACTTGAAGG+AGG 0.652330 6.2:+87960244 None:intergenic
TGTCCATATAGTAATCTGGA+GGG 0.652873 6.2:+87959881 None:intergenic
TGAAACATGGAAGATTGCCA+TGG 0.657492 6.2:-87960639 MS.gene064527:CDS
CTGTCCATATAGTAATCTGG+AGG 0.661395 6.2:+87959880 None:intergenic
ATTATTACACCATGTTAAGG+CGG 0.661598 6.2:+87956502 None:intergenic
TGGTGTGCAGGATGGAAGAG+TGG 0.665762 6.2:-87961942 MS.gene064527:CDS
ATAGGAGTCATGGAGGACAA+TGG 0.668243 6.2:+87959518 None:intergenic
ATCGATTTGCATGTAAAGCG+CGG 0.673961 6.2:-87958933 MS.gene064527:CDS
AGGGACAGAAAGATATAACG+AGG 0.678411 6.2:-87961684 MS.gene064527:CDS
GGGACAGAAAGATATAACGA+GGG 0.681422 6.2:-87961683 MS.gene064527:CDS
CTGTGAAGCAGCTAAAGGAG+CGG 0.689058 6.2:+87961415 None:intergenic
AAGACCAAGGGTCTATACCA+AGG 0.689511 6.2:-87959233 MS.gene064527:intron
AGGAAAACTAGAACCATGGG+CGG 0.691463 6.2:+87958178 None:intergenic
GTAAGTGACCCAAGAAAGGG+CGG 0.698577 6.2:-87958897 MS.gene064527:CDS
TGCTATCCGAATGAACTTGG+GGG 0.699431 6.2:-87960001 MS.gene064527:CDS
GGCCAACTATATAACAAGGG+AGG 0.715501 6.2:-87956683 MS.gene064527:CDS
AACGGCCAACTATATAACAA+GGG 0.722026 6.2:-87956686 MS.gene064527:CDS
AACTTGATTGATCGTGACGG+TGG 0.723315 6.2:-87959101 MS.gene064527:CDS
AATGATAATAGGAGTCATGG+AGG 0.729975 6.2:+87959511 None:intergenic
TGTAGATGCCGATAGAAATG+CGG 0.739096 6.2:-87959705 MS.gene064527:CDS
GAAAACTTGATTGATCGTGA+CGG 0.747389 6.2:-87959104 MS.gene064527:CDS
TACGCGTGGATCAATTACAG+TGG 0.751161 6.2:-87956865 MS.gene064527:CDS
GGATTTACGAAATTACAAGG+TGG 0.751484 6.2:-87960323 MS.gene064527:CDS
CAGGATGGAAGAGTGGACAG+GGG 0.770776 6.2:-87961935 MS.gene064527:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAATTCATTATTTAAC+CGG - chr6.2:87959678-87959697 MS.gene064527:CDS 10.0%
!! TGAAAATAAAAATAAATTTC+GGG - chr6.2:87960447-87960466 MS.gene064527:CDS 10.0%
!! AAGAAAACTAAAACATAAAA+TGG - chr6.2:87960134-87960153 MS.gene064527:intron 15.0%
!! ATTTATTACAAGATTATCTA+TGG - chr6.2:87959068-87959087 MS.gene064527:CDS 15.0%
!!! AAAAAAATTGCAACTTTTAT+TGG - chr6.2:87959873-87959892 MS.gene064527:intron 15.0%
!!! AGTTTTCTTTGTAAATTTTT+TGG + chr6.2:87960123-87960142 None:intergenic 15.0%
!!! TTGATTTCTTGATATTTTAT+AGG - chr6.2:87961561-87961580 MS.gene064527:CDS 15.0%
!! AAAGTAAAAGACAAATTACA+TGG - chr6.2:87959950-87959969 MS.gene064527:CDS 20.0%
!! AAGAAACTATTTCAATACAA+AGG + chr6.2:87959276-87959295 None:intergenic 20.0%
!! AATACCTTTGTAATGATAAT+AGG + chr6.2:87958978-87958997 None:intergenic 20.0%
!! ATATTGACAATAAAAAGTCA+AGG + chr6.2:87960397-87960416 None:intergenic 20.0%
!! TATTTGCATTTACTTTGATT+AGG + chr6.2:87961094-87961113 None:intergenic 20.0%
!! TTATTCATGCAATATTCTAA+TGG + chr6.2:87961330-87961349 None:intergenic 20.0%
!! TTGAACATTAATAGGAAAAT+TGG - chr6.2:87959512-87959531 MS.gene064527:CDS 20.0%
!! TTTCTTAATCATTTCATCTT+AGG - chr6.2:87959195-87959214 MS.gene064527:intron 20.0%
!!! AAAAAGGATTAGAGTATTTA+TGG + chr6.2:87960175-87960194 None:intergenic 20.0%
!!! ATGTAATTTGTCTTTTACTT+TGG + chr6.2:87959951-87959970 None:intergenic 20.0%
!!! ATTTTCCTATTAATGTTCAA+AGG + chr6.2:87959512-87959531 None:intergenic 20.0%
!!! TTGTAAATTTTTTGGCTAAA+TGG + chr6.2:87960115-87960134 None:intergenic 20.0%
!!! TTTCAGAAATGAAGTTTTAA+TGG + chr6.2:87957586-87957605 None:intergenic 20.0%
!!! TTTCATTATATAAGAAGCAT+GGG + chr6.2:87960432-87960451 None:intergenic 20.0%
!!! TTTTCATTATATAAGAAGCA+TGG + chr6.2:87960433-87960452 None:intergenic 20.0%
! AAAAAAATAGCTTAGGCAAA+TGG + chr6.2:87961013-87961032 None:intergenic 25.0%
! AAACAACAGAAAAGATCAAA+GGG + chr6.2:87957449-87957468 None:intergenic 25.0%
! AAACACCTTTGAACATTAAT+AGG - chr6.2:87959504-87959523 MS.gene064527:intron 25.0%
! AAGCATACAAATATAGGATA+AGG + chr6.2:87958330-87958349 None:intergenic 25.0%
! ACATACAAATTTAGAGAATG+GGG - chr6.2:87956591-87956610 MS.gene064527:CDS 25.0%
! ACCAACACAATTAATGTAAA+AGG - chr6.2:87960863-87960882 MS.gene064527:intron 25.0%
! ACTTTATTGAACCAAACAAA+AGG - chr6.2:87958934-87958953 MS.gene064527:CDS 25.0%
! AGAAATATTTATGCACCTAA+TGG - chr6.2:87957973-87957992 MS.gene064527:intron 25.0%
! ATATCCAACAATGAAGAATT+TGG - chr6.2:87960936-87960955 MS.gene064527:intron 25.0%
! ATCACAATTAGATTGTAGTT+AGG + chr6.2:87959312-87959331 None:intergenic 25.0%
! ATGTGTAGTAATATAGAACT+TGG - chr6.2:87958018-87958037 MS.gene064527:intron 25.0%
! ATTACAAGATTATCTATGGT+TGG - chr6.2:87959072-87959091 MS.gene064527:CDS 25.0%
! ATTATAAAGCTATATTCTGG+AGG + chr6.2:87961366-87961385 None:intergenic 25.0%
! ATTGCATTTAGCATAAGATA+AGG + chr6.2:87956715-87956734 None:intergenic 25.0%
! CAAATTCTTAATTCATGTTG+TGG - chr6.2:87957484-87957503 MS.gene064527:intron 25.0%
! CAATACAAGCATACAAATAT+AGG + chr6.2:87958336-87958355 None:intergenic 25.0%
! CCAAATCAAAAAATTGATAC+TGG + chr6.2:87961702-87961721 None:intergenic 25.0%
! CCTGATAAAAAAAATAGCTT+AGG + chr6.2:87961020-87961039 None:intergenic 25.0%
! GACATACAAATTTAGAGAAT+GGG - chr6.2:87956590-87956609 MS.gene064527:CDS 25.0%
! GCTTGTATTGTATATTCTAA+TGG - chr6.2:87958346-87958365 MS.gene064527:intron 25.0%
! GTTCAGCATATCATATAAAT+TGG + chr6.2:87960757-87960776 None:intergenic 25.0%
! TAAACAACAGAAAAGATCAA+AGG + chr6.2:87957450-87957469 None:intergenic 25.0%
! TAATATTCATGTCAGATAGA+AGG + chr6.2:87960789-87960808 None:intergenic 25.0%
! TCGATTATAAAGCTATATTC+TGG + chr6.2:87961369-87961388 None:intergenic 25.0%
! TGTGTAGTAATATAGAACTT+GGG - chr6.2:87958019-87958038 MS.gene064527:intron 25.0%
! TTAATGTGACAGTGAAAAAT+TGG - chr6.2:87960825-87960844 MS.gene064527:intron 25.0%
! TTTCCACAGTTATTATTGAA+GGG + chr6.2:87961934-87961953 None:intergenic 25.0%
!! AAAAACACCACAACTATTTT+CGG + chr6.2:87957320-87957339 None:intergenic 25.0%
!! AATAGTTTGTGCAAAAGATT+TGG + chr6.2:87958545-87958564 None:intergenic 25.0%
!! ACCTTTTACATTAATTGTGT+TGG + chr6.2:87960867-87960886 None:intergenic 25.0%
!! ATTTTTGTAGATTTCTGCAA+AGG + chr6.2:87957687-87957706 None:intergenic 25.0%
!! TGCACTAATATTTTCAAAGT+CGG + chr6.2:87958503-87958522 None:intergenic 25.0%
!! TTACTCATACCTTTTACAAT+AGG - chr6.2:87961270-87961289 MS.gene064527:intron 25.0%
!! TTTGGTTCAATAAAGTTTGT+TGG + chr6.2:87958930-87958949 None:intergenic 25.0%
!!! AAAAGATTTGGAAAGCATTT+CGG + chr6.2:87958533-87958552 None:intergenic 25.0%
!!! ACAAGTTTTTGGATATTGAA+AGG - chr6.2:87956771-87956790 MS.gene064527:CDS 25.0%
!!! ATTAATGTTCAAAGGTGTTT+TGG + chr6.2:87959504-87959523 None:intergenic 25.0%
!!! CAAGTTTTTGGATATTGAAA+GGG - chr6.2:87956772-87956791 MS.gene064527:CDS 25.0%
!!! CATATAAATTGGTAGTCTTT+TGG + chr6.2:87960746-87960765 None:intergenic 25.0%
!!! CCAGTATCAATTTTTTGATT+TGG - chr6.2:87961699-87961718 MS.gene064527:CDS 25.0%
!!! CCTAAGCTATTTTTTTTATC+AGG - chr6.2:87961017-87961036 MS.gene064527:intron 25.0%
!!! GAATATAGCTTTATAATCGA+TGG - chr6.2:87961369-87961388 MS.gene064527:intron 25.0%
!!! TCTTTTTTTCATCATTAGCT+AGG + chr6.2:87957933-87957952 None:intergenic 25.0%
!!! TTAATGTTCAAAGGTGTTTT+GGG + chr6.2:87959503-87959522 None:intergenic 25.0%
AAAGACAATCTTTCAGACAT+TGG - chr6.2:87960558-87960577 MS.gene064527:CDS 30.0%
AAATATCATCGAGTACAGAA+GGG + chr6.2:87958283-87958302 None:intergenic 30.0%
AATCCCTTCAATAATAACTG+TGG - chr6.2:87961928-87961947 MS.gene064527:intron 30.0%
AATCTACTAAAAAGGGTAAC+TGG - chr6.2:87961820-87961839 MS.gene064527:intron 30.0%
AATGGAACTTTGTTAAAAGG+AGG - chr6.2:87957991-87958010 MS.gene064527:intron 30.0%
ACATCATAAAGCACATGTAA+TGG - chr6.2:87960360-87960379 MS.gene064527:CDS 30.0%
ACGATGATAATCAACATAAC+TGG - chr6.2:87960598-87960617 MS.gene064527:CDS 30.0%
ACTTTGATTAGGTGATGATT+AGG + chr6.2:87961083-87961102 None:intergenic 30.0%
ATCAAGTTACTTACATCTTG+TGG + chr6.2:87961471-87961490 None:intergenic 30.0%
ATGAGTTTCAACCTCTTAAA+TGG + chr6.2:87957112-87957131 None:intergenic 30.0%
ATGATGTGAAGTATGAAAAC+AGG + chr6.2:87960347-87960366 None:intergenic 30.0%
ATGGAACTTTGTTAAAAGGA+GGG - chr6.2:87957992-87958011 MS.gene064527:intron 30.0%
ATTGTCTTTAACCAATACCA+AGG + chr6.2:87960547-87960566 None:intergenic 30.0%
CAGCTTCGAAAAAAATTATC+AGG + chr6.2:87956628-87956647 None:intergenic 30.0%
CCTAATGGAACTTTGTTAAA+AGG - chr6.2:87957988-87958007 MS.gene064527:intron 30.0%
CTATCTTATGTAGCTATTAC+CGG - chr6.2:87959334-87959353 MS.gene064527:CDS 30.0%
GAATAGATTGTAACAATGAC+CGG + chr6.2:87959713-87959732 None:intergenic 30.0%
GACTCCTATTATCATTACAA+AGG - chr6.2:87958971-87958990 MS.gene064527:CDS 30.0%
GCATAAATATTTCTTAACCC+AGG + chr6.2:87957967-87957986 None:intergenic 30.0%
GGAAAAAATTCCATCCAATT+TGG - chr6.2:87960619-87960638 MS.gene064527:CDS 30.0%
GGACATACAAATTTAGAGAA+TGG - chr6.2:87956589-87956608 MS.gene064527:CDS 30.0%
GTTTCCACAGTTATTATTGA+AGG + chr6.2:87961935-87961954 None:intergenic 30.0%
TAGCCTAAGTCACAAATAAT+AGG - chr6.2:87960717-87960736 MS.gene064527:CDS 30.0%
TAGTGATCTTAATCATCAGA+CGG + chr6.2:87960084-87960103 None:intergenic 30.0%
TATTGTCGTCAATGATGAAA+TGG - chr6.2:87958854-87958873 MS.gene064527:intron 30.0%
TCATACTGTCCTATTGTAAA+AGG + chr6.2:87961282-87961301 None:intergenic 30.0%
TGATTTATTTATACTGCAGC+TGG + chr6.2:87959608-87959627 None:intergenic 30.0%
TGTAATGATAATAGGAGTCA+TGG + chr6.2:87958970-87958989 None:intergenic 30.0%
TGTAGTGATTAATGTCATTC+TGG + chr6.2:87960672-87960691 None:intergenic 30.0%
TTCTAATGGTTAGTATGAAC+AGG - chr6.2:87958360-87958379 MS.gene064527:intron 30.0%
! ACGATCAATCAAGTTTTCAT+AGG + chr6.2:87959369-87959388 None:intergenic 30.0%
! AGCTTTTATCAAAATGGACA+TGG + chr6.2:87960963-87960982 None:intergenic 30.0%
! CACACAAGCTTTTATCAAAA+TGG + chr6.2:87960969-87960988 None:intergenic 30.0%
! CACTAATATTTTCAAAGTCG+GGG + chr6.2:87958501-87958520 None:intergenic 30.0%
! CCTTTTAACAAAGTTCCATT+AGG + chr6.2:87957991-87958010 None:intergenic 30.0%
! GCACTAATATTTTCAAAGTC+GGG + chr6.2:87958502-87958521 None:intergenic 30.0%
! GGAGAGTTTCTTATTTCTTT+CGG + chr6.2:87957207-87957226 None:intergenic 30.0%
! GTAATGGGATATACTATACA+TGG - chr6.2:87958201-87958220 MS.gene064527:CDS 30.0%
! TAAGAGGAAACACAAGTTTT+TGG - chr6.2:87956760-87956779 MS.gene064527:CDS 30.0%
! TTTTCATAGGAAACTGTATC+CGG + chr6.2:87959356-87959375 None:intergenic 30.0%
! TTTTTATCAGGAACTAGAAG+TGG - chr6.2:87961029-87961048 MS.gene064527:intron 30.0%
!! TACACTTCATTTTGTTGCTT+TGG - chr6.2:87959100-87959119 MS.gene064527:CDS 30.0%
!! TCAGTTTTGGTCTAAACAAT+GGG - chr6.2:87961642-87961661 MS.gene064527:CDS 30.0%
!! TTCAGTTTTGGTCTAAACAA+TGG - chr6.2:87961641-87961660 MS.gene064527:CDS 30.0%
!!! TGGTGTTTTTAGAAATGTAG+CGG - chr6.2:87957330-87957349 MS.gene064527:intron 30.0%
!!! TTTTTTTCGAAGCTGAAAAG+CGG - chr6.2:87956633-87956652 MS.gene064527:CDS 30.0%
AAAAAGATAATGAGCGATCC+TGG - chr6.2:87957946-87957965 MS.gene064527:intron 35.0%
AAAAGATAATGAGCGATCCT+GGG - chr6.2:87957947-87957966 MS.gene064527:intron 35.0%
AAAAGATCAAAGGGAAGAGA+AGG + chr6.2:87957440-87957459 None:intergenic 35.0%
AACCAAGTCAATGCAATACA+GGG - chr6.2:87961421-87961440 MS.gene064527:CDS 35.0%
AACGGCCAACTATATAACAA+GGG - chr6.2:87961789-87961808 MS.gene064527:intron 35.0%
AATAAGAAACTCTCCACTAG+TGG - chr6.2:87957212-87957231 MS.gene064527:intron 35.0%
AATCGTATTCATCGTCGTAA+TGG + chr6.2:87961229-87961248 None:intergenic 35.0%
AATGAGCTCATTGTCATTGA+AGG - chr6.2:87956568-87956587 MS.gene064527:CDS 35.0%
AATGATAATAGGAGTCATGG+AGG + chr6.2:87958967-87958986 None:intergenic 35.0%
AATGGCAGATTAGTAGCAAT+TGG - chr6.2:87961868-87961887 MS.gene064527:intron 35.0%
AATTTAGAGAATGGGGTTGA+AGG - chr6.2:87956598-87956617 MS.gene064527:CDS 35.0%
AGGTTGCGAATCTACTAAAA+AGG - chr6.2:87961812-87961831 MS.gene064527:intron 35.0%
AGTTAGGAAAACTAGAACCA+TGG + chr6.2:87960304-87960323 None:intergenic 35.0%
ATACAAAGGAGTTAGAACCT+TGG + chr6.2:87959262-87959281 None:intergenic 35.0%
ATGTCGTGTTATCGAGTATT+TGG + chr6.2:87958573-87958592 None:intergenic 35.0%
ATTCCCTCCAGATTACTATA+TGG - chr6.2:87958591-87958610 MS.gene064527:intron 35.0%
ATTTAACCGGAACATTTGTC+CGG - chr6.2:87959691-87959710 MS.gene064527:CDS 35.0%
CAGCCTATTATTTGTGACTT+AGG + chr6.2:87960723-87960742 None:intergenic 35.0%
CATAACTGTCCAAGATGTTT+AGG + chr6.2:87958387-87958406 None:intergenic 35.0%
CATATCATAAGCTTGTGCTT+TGG + chr6.2:87957033-87957052 None:intergenic 35.0%
CATGTTATTGAATCGGAACT+TGG - chr6.2:87956834-87956853 MS.gene064527:CDS 35.0%
CATTATAGCAACTAAGTCGT+GGG + chr6.2:87961852-87961871 None:intergenic 35.0%
CATTGGTGAGAAGTTAGTAA+AGG - chr6.2:87958095-87958114 MS.gene064527:intron 35.0%
CTAAACATCTTGGACAGTTA+TGG - chr6.2:87958385-87958404 MS.gene064527:intron 35.0%
CTTTACTAACTTCTCACCAA+TGG + chr6.2:87958097-87958116 None:intergenic 35.0%
GAAAACTTGATTGATCGTGA+CGG - chr6.2:87959371-87959390 MS.gene064527:intron 35.0%
GAAATATCATCGAGTACAGA+AGG + chr6.2:87958284-87958303 None:intergenic 35.0%
GATTGACAATCCAAATTGGA+TGG + chr6.2:87960632-87960651 None:intergenic 35.0%
GCAATGACTGTCAATGTAAT+GGG - chr6.2:87958186-87958205 MS.gene064527:CDS 35.0%
GGAGGATTTACGAAATTACA+AGG - chr6.2:87958149-87958168 MS.gene064527:CDS 35.0%
GGATTTACGAAATTACAAGG+TGG - chr6.2:87958152-87958171 MS.gene064527:CDS 35.0%
GGTTGCGAATCTACTAAAAA+GGG - chr6.2:87961813-87961832 MS.gene064527:intron 35.0%
GTTAGGAAAACTAGAACCAT+GGG + chr6.2:87960303-87960322 None:intergenic 35.0%
GTTCGATTGACAATCCAAAT+TGG + chr6.2:87960636-87960655 None:intergenic 35.0%
GTTGATGCAAATGCTAAGTT+AGG + chr6.2:87960320-87960339 None:intergenic 35.0%
TAGGTTTCTTCGATAAAGCA+AGG - chr6.2:87961580-87961599 MS.gene064527:CDS 35.0%
TCAGGCACATGTTATTGAAT+CGG - chr6.2:87956827-87956846 MS.gene064527:CDS 35.0%
TCTAAACAATGGGATACTCA+TGG - chr6.2:87961652-87961671 MS.gene064527:CDS 35.0%
TGCAAACACTAGTAGAAACT+TGG + chr6.2:87960276-87960295 None:intergenic 35.0%
TGCAATGACTGTCAATGTAA+TGG - chr6.2:87958185-87958204 MS.gene064527:CDS 35.0%
TGGAACTTTGTTAAAAGGAG+GGG - chr6.2:87957993-87958012 MS.gene064527:intron 35.0%
TGGACCAAATTCTTCATTGT+TGG + chr6.2:87960943-87960962 None:intergenic 35.0%
TGGGAAAAGCTTAGAGATAT+TGG - chr6.2:87958038-87958057 MS.gene064527:intron 35.0%
TGTCCATATAGTAATCTGGA+GGG + chr6.2:87958597-87958616 None:intergenic 35.0%
TTATCGGGAGATATATCAGT+AGG + chr6.2:87958894-87958913 None:intergenic 35.0%
TTCAATAACATGTGCCTGAT+TGG + chr6.2:87956826-87956845 None:intergenic 35.0%
TTGTTCCATGATCTCTAAGT+TGG + chr6.2:87958737-87958756 None:intergenic 35.0%
TTGTTTCCTAGCAACTTTAC+CGG - chr6.2:87961393-87961412 MS.gene064527:intron 35.0%
TTTAACCAATACCAAGGATC+CGG + chr6.2:87960541-87960560 None:intergenic 35.0%
TTTCTGCTACACCATTTAAG+AGG - chr6.2:87957098-87957117 MS.gene064527:intron 35.0%
! AAAGCTATATTCTGGAGGTT+TGG + chr6.2:87961361-87961380 None:intergenic 35.0%
! AACCTCCCTTGTTATATAGT+TGG + chr6.2:87961797-87961816 None:intergenic 35.0%
! AACGTGAATTTTGTACTGTC+CGG - chr6.2:87957284-87957303 MS.gene064527:intron 35.0%
! ACAACTGTAAACAGGCATTT+TGG - chr6.2:87958804-87958823 MS.gene064527:intron 35.0%
! ACTTAGGCTATGATGAGTTT+TGG + chr6.2:87960707-87960726 None:intergenic 35.0%
! CATGTTTCTACGTAACAACA+TGG + chr6.2:87958306-87958325 None:intergenic 35.0%
! GCAATTCTTTTCCAGTTGTT+GGG - chr6.2:87956730-87956749 MS.gene064527:CDS 35.0%
! GGAAGGATGAATAAAGTGTT+TGG - chr6.2:87959762-87959781 MS.gene064527:intron 35.0%
! GTGGTGACAATTTTCAGTTT+TGG - chr6.2:87961629-87961648 MS.gene064527:CDS 35.0%
! GTTTTATATGCATTGCATGC+AGG - chr6.2:87958706-87958725 MS.gene064527:intron 35.0%
! TGCAATTCTTTTCCAGTTGT+TGG - chr6.2:87956729-87956748 MS.gene064527:CDS 35.0%
! TTTGCTATCCGAATGAACTT+GGG - chr6.2:87958472-87958491 MS.gene064527:intron 35.0%
!! GAAAGTACGAAGCATTGTTA+TGG + chr6.2:87961198-87961217 None:intergenic 35.0%
!! TCAATAAAGTTTGTTGGAGC+TGG + chr6.2:87958924-87958943 None:intergenic 35.0%
!! TCAGACATTGGTATTGACTA+AGG - chr6.2:87960570-87960589 MS.gene064527:CDS 35.0%
!!! ACTTTGTTTTACAAGAGCAG+TGG - chr6.2:87961304-87961323 MS.gene064527:intron 35.0%
!!! AGTTGGTGGTATTTTAACTG+TGG - chr6.2:87958128-87958147 MS.gene064527:CDS 35.0%
!!! CTTCATTTTGTTGCTTTGGT+AGG - chr6.2:87959104-87959123 MS.gene064527:CDS 35.0%
!!! GGTGTTTTTAGAAATGTAGC+GGG - chr6.2:87957331-87957350 MS.gene064527:intron 35.0%
!!! TGCTTTTTCGAAGCTATTTC+TGG - chr6.2:87959741-87959760 MS.gene064527:CDS 35.0%
!!! TTTTCGAAGCTATTTCTGGA+AGG - chr6.2:87959745-87959764 MS.gene064527:CDS 35.0%
ACCTTATTCCAACCAGCTAT+AGG - chr6.2:87957862-87957881 MS.gene064527:intron 40.0%
ACTGTGGAAACAGCTTTCTT+TGG - chr6.2:87961944-87961963 MS.gene064527:CDS 40.0%
AGAAATACTTGAGTCACTGC+TGG + chr6.2:87959180-87959199 None:intergenic 40.0%
AGGGACAGAAAGATATAACG+AGG - chr6.2:87956791-87956810 MS.gene064527:CDS 40.0%
AGTAGAAACTTGGCCTGTAA+CGG + chr6.2:87960266-87960285 None:intergenic 40.0%
AGTAGCAATTGGCATTTGTG+TGG - chr6.2:87961879-87961898 MS.gene064527:intron 40.0%
AGTTGCCGCAAAAACATTAG+AGG - chr6.2:87960513-87960532 MS.gene064527:CDS 40.0%
CAACCAAGTCAATGCAATAC+AGG - chr6.2:87961420-87961439 MS.gene064527:CDS 40.0%
CAACGGCCAACTATATAACA+AGG - chr6.2:87961788-87961807 MS.gene064527:intron 40.0%
CAATCTTCCATGTTTCAACC+AGG + chr6.2:87957833-87957852 None:intergenic 40.0%
CACCTGTCCATATAGTAATC+TGG + chr6.2:87958601-87958620 None:intergenic 40.0%
CACTGACAACAACTGTAAAC+AGG - chr6.2:87958796-87958815 MS.gene064527:intron 40.0%
CAGTGATACCGCATTTCTAT+CGG + chr6.2:87958781-87958800 None:intergenic 40.0%
CCACGACTTAGTTGCTATAA+TGG - chr6.2:87961850-87961869 MS.gene064527:intron 40.0%
CCATTATAGCAACTAAGTCG+TGG + chr6.2:87961853-87961872 None:intergenic 40.0%
CGCAAAAACATTAGAGGATC+CGG - chr6.2:87960519-87960538 MS.gene064527:CDS 40.0%
CTCCAGATTACTATATGGAC+AGG - chr6.2:87958596-87958615 MS.gene064527:intron 40.0%
CTGTCCATATAGTAATCTGG+AGG + chr6.2:87958598-87958617 None:intergenic 40.0%
GATTACTATATGGACAGGTG+TGG - chr6.2:87958601-87958620 MS.gene064527:intron 40.0%
GATTTGAAGATCGGTCAGTA+TGG + chr6.2:87961758-87961777 None:intergenic 40.0%
GCACTCTAGTGTTTCCTTTA+AGG + chr6.2:87960044-87960063 None:intergenic 40.0%
GCTATAGGACTTGCGAAAAA+TGG - chr6.2:87957877-87957896 MS.gene064527:intron 40.0%
GCTCAAACTTTGCACCTTAA+AGG - chr6.2:87960027-87960046 MS.gene064527:CDS 40.0%
GCTTTCTACAATGGAACCAT+TGG - chr6.2:87958078-87958097 MS.gene064527:intron 40.0%
GGGACAGAAAGATATAACGA+GGG - chr6.2:87956792-87956811 MS.gene064527:CDS 40.0%
GTTCCATTGTAGAAAGCTTG+TGG + chr6.2:87958075-87958094 None:intergenic 40.0%
TAAGAACTTAGCTTCGGGAT+CGG + chr6.2:87957761-87957780 None:intergenic 40.0%
TAAGTTCTTAGGTGCCTTGT+CGG - chr6.2:87957771-87957790 MS.gene064527:intron 40.0%
TACGCTTCCGAAAATAGTTG+TGG - chr6.2:87957310-87957329 MS.gene064527:intron 40.0%
TCCTATAGCTGGTTGGAATA+AGG + chr6.2:87957866-87957885 None:intergenic 40.0%
TCGAGCTTTCAGAAGAAAGT+AGG - chr6.2:87959402-87959421 MS.gene064527:intron 40.0%
TCTACCGACATTAAGACAGT+GGG + chr6.2:87957371-87957390 None:intergenic 40.0%
TGAAACATGGAAGATTGCCA+TGG - chr6.2:87957836-87957855 MS.gene064527:intron 40.0%
TGAACAGGTCCTAAACATCT+TGG - chr6.2:87958375-87958394 MS.gene064527:intron 40.0%
TGGAAACAGCTTTCTTTGGT+GGG - chr6.2:87961948-87961967 MS.gene064527:CDS 40.0%
TGTAGATGCCGATAGAAATG+CGG - chr6.2:87958770-87958789 MS.gene064527:intron 40.0%
TTATATGCATTGCATGCAGG+TGG - chr6.2:87958709-87958728 MS.gene064527:intron 40.0%
TTGCTATCCGAATGAACTTG+GGG - chr6.2:87958473-87958492 MS.gene064527:intron 40.0%
! ACCAGGCTTGATTTGAAGAT+CGG + chr6.2:87961767-87961786 None:intergenic 40.0%
! AGGCTTTTCCTGAAAGAAAG+AGG - chr6.2:87959422-87959441 MS.gene064527:intron 40.0%
! CAGTTGGTGTTTCAATGCTT+AGG - chr6.2:87956889-87956908 MS.gene064527:CDS 40.0%
! CTTGTTATATAGTTGGCCGT+TGG + chr6.2:87961790-87961809 None:intergenic 40.0%
! TTTTTCGCAAGTCCTATAGC+TGG + chr6.2:87957877-87957896 None:intergenic 40.0%
!! ATAAAGTTTGTTGGAGCTGG+AGG + chr6.2:87958921-87958940 None:intergenic 40.0%
!! ATAGACCCTTGGTCTTAGAA+CGG + chr6.2:87959238-87959257 None:intergenic 40.0%
!! ATCGATTTGCATGTAAAGCG+CGG - chr6.2:87959542-87959561 MS.gene064527:CDS 40.0%
!! CGGATCCTCTAATGTTTTTG+CGG + chr6.2:87960521-87960540 None:intergenic 40.0%
!! GTTGATGACCTCTTTCTTTC+AGG + chr6.2:87959433-87959452 None:intergenic 40.0%
!! GTTGTTTTCCAAGCTTCAAG+TGG - chr6.2:87956963-87956982 MS.gene064527:intron 40.0%
!! GTTTGCTATCCGAATGAACT+TGG - chr6.2:87958471-87958490 MS.gene064527:intron 40.0%
!! GTTTTTAGAAATGTAGCGGG+TGG - chr6.2:87957334-87957353 MS.gene064527:intron 40.0%
!! TATTTTCGGAAGCGTACTTC+CGG + chr6.2:87957306-87957325 None:intergenic 40.0%
!! TGTAAACAGGCATTTTGGAG+CGG - chr6.2:87958809-87958828 MS.gene064527:intron 40.0%
!!! AGGCTATGATGAGTTTTGGA+AGG + chr6.2:87960703-87960722 None:intergenic 40.0%
!!! TGGTGGTATTTTAACTGTGG+AGG - chr6.2:87958131-87958150 MS.gene064527:CDS 40.0%
AAAAGCTGCTGCAGCTTCTA+AGG - chr6.2:87959999-87960018 MS.gene064527:CDS 45.0%
AAATTTCCCTTTGCCGCATC+CGG + chr6.2:87958415-87958434 None:intergenic 45.0%
AACTTGATTGATCGTGACGG+TGG - chr6.2:87959374-87959393 MS.gene064527:intron 45.0%
AAGACCAAGGGTCTATACCA+AGG - chr6.2:87959242-87959261 MS.gene064527:CDS 45.0%
AAGCTTAGAGATATTGGCCG+AGG - chr6.2:87958044-87958063 MS.gene064527:intron 45.0%
AAGGTGACGATGATCAGAGA+CGG + chr6.2:87960198-87960217 None:intergenic 45.0%
ACAGGTGTGGTATACTCTGT+TGG - chr6.2:87958614-87958633 MS.gene064527:intron 45.0%
ACCGATCTTCAAATCAAGCC+TGG - chr6.2:87961763-87961782 MS.gene064527:intron 45.0%
AGAACCTTGGTATAGACCCT+TGG + chr6.2:87959249-87959268 None:intergenic 45.0%
AGCAGTAAGTGACCCAAGAA+AGG - chr6.2:87959574-87959593 MS.gene064527:CDS 45.0%
AGGAAAACTAGAACCATGGG+CGG + chr6.2:87960300-87960319 None:intergenic 45.0%
AGTGCACAAATATGGTGTGC+AGG - chr6.2:87956521-87956540 MS.gene064527:CDS 45.0%
ATAGGAGTCATGGAGGACAA+TGG + chr6.2:87958960-87958979 None:intergenic 45.0%
ATGATTAGGTGACTGACGCA+AGG + chr6.2:87961069-87961088 None:intergenic 45.0%
CAAACCTGTGAAGCAGCTAA+AGG + chr6.2:87957068-87957087 None:intergenic 45.0%
CAATGACCGGACAAATGTTC+CGG + chr6.2:87959700-87959719 None:intergenic 45.0%
CACAAATATGGTGTGCAGGA+TGG - chr6.2:87956525-87956544 MS.gene064527:CDS 45.0%
CAGACGATAGAATCCTCCAA+AGG - chr6.2:87960482-87960501 MS.gene064527:CDS 45.0%
CATCAACTGTGTGCATGTCA+AGG - chr6.2:87959446-87959465 MS.gene064527:intron 45.0%
CCAAGTAAGTTGCAAAGCGT+GGG + chr6.2:87957621-87957640 None:intergenic 45.0%
CGATGATCAGAGACGGAAAA+AGG + chr6.2:87960191-87960210 None:intergenic 45.0%
CGGCATCTACAACACATGTA+TGG + chr6.2:87958761-87958780 None:intergenic 45.0%
CTACCGACATTAAGACAGTG+GGG + chr6.2:87957370-87957389 None:intergenic 45.0%
CTCACCCTCCAATATCACTT+CGG - chr6.2:87957242-87957261 MS.gene064527:intron 45.0%
GATCCCGAAGCTAAGTTCTT+AGG - chr6.2:87957760-87957779 MS.gene064527:intron 45.0%
GATGCGGCAAAGGGAAATTT+AGG - chr6.2:87958415-87958434 MS.gene064527:intron 45.0%
GCACCTAAGAACTTAGCTTC+GGG + chr6.2:87957766-87957785 None:intergenic 45.0%
GCAGTAAGTGACCCAAGAAA+GGG - chr6.2:87959575-87959594 MS.gene064527:CDS 45.0%
GCATCCGAAGTGATATTGGA+GGG + chr6.2:87957249-87957268 None:intergenic 45.0%
GCTAGGTATTCTTCGAGTGT+AGG + chr6.2:87957916-87957935 None:intergenic 45.0%
GCTTTGGTAGGATGACCAAT+TGG - chr6.2:87959116-87959135 MS.gene064527:CDS 45.0%
GGCACCTAAGAACTTAGCTT+CGG + chr6.2:87957767-87957786 None:intergenic 45.0%
GGCATTTGTGTGGATGCAAA+TGG - chr6.2:87961889-87961908 MS.gene064527:intron 45.0%
GGCCAACTATATAACAAGGG+AGG - chr6.2:87961792-87961811 MS.gene064527:intron 45.0%
GGGAGATATATCAGTAGGTG+TGG + chr6.2:87958889-87958908 None:intergenic 45.0%
GGGATTCGTTCTACTTCAAC+TGG - chr6.2:87958831-87958850 MS.gene064527:intron 45.0%
GGTGTTTCAATGCTTAGGCT+TGG - chr6.2:87956894-87956913 MS.gene064527:CDS 45.0%
GGTTGGAATAAGGTCTTCCA+TGG + chr6.2:87957856-87957875 None:intergenic 45.0%
GTAAAGGATGTCGCAGAAGT+TGG - chr6.2:87958111-87958130 MS.gene064527:intron 45.0%
GTCTACCGACATTAAGACAG+TGG + chr6.2:87957372-87957391 None:intergenic 45.0%
GTGGAAACAGCTTTCTTTGG+TGG - chr6.2:87961947-87961966 MS.gene064527:CDS 45.0%
GTGTGCATCCGAAGTGATAT+TGG + chr6.2:87957253-87957272 None:intergenic 45.0%
GTTTCAATGCTTAGGCTTGG+TGG - chr6.2:87956897-87956916 MS.gene064527:intron 45.0%
TACCGACATTAAGACAGTGG+GGG + chr6.2:87957369-87957388 None:intergenic 45.0%
TACGCGTGGATCAATTACAG+TGG - chr6.2:87961610-87961629 MS.gene064527:CDS 45.0%
TAGAGATATTGGCCGAGGAA+GGG - chr6.2:87958049-87958068 MS.gene064527:intron 45.0%
TCAAATCAAGCCTGGTCCAA+CGG - chr6.2:87961771-87961790 MS.gene064527:intron 45.0%
TCACTTCGGATGCACACATT+TGG - chr6.2:87957256-87957275 MS.gene064527:intron 45.0%
TCCAAGTAAGTTGCAAAGCG+TGG + chr6.2:87957622-87957641 None:intergenic 45.0%
TCGGTCAGTATGGTGAAAAG+CGG + chr6.2:87961748-87961767 None:intergenic 45.0%
TGATTAGGTGACTGACGCAA+GGG + chr6.2:87961068-87961087 None:intergenic 45.0%
TGCATCCGAAGTGATATTGG+AGG + chr6.2:87957250-87957269 None:intergenic 45.0%
TGCTATCCGAATGAACTTGG+GGG - chr6.2:87958474-87958493 MS.gene064527:intron 45.0%
TGGAGCCAACTTAGAGATCA+TGG - chr6.2:87958729-87958748 MS.gene064527:intron 45.0%
TGGAGCTGGAGGTAGTTTAT+CGG + chr6.2:87958910-87958929 None:intergenic 45.0%
TGGTAGGATGACCAATTGGT+CGG - chr6.2:87959120-87959139 MS.gene064527:CDS 45.0%
TGTGTGGATGCAAATGGAGA+TGG - chr6.2:87961895-87961914 MS.gene064527:intron 45.0%
TTAGAGATATTGGCCGAGGA+AGG - chr6.2:87958048-87958067 MS.gene064527:intron 45.0%
TTCCAAGCTTCAAGTGGCAT+TGG - chr6.2:87956969-87956988 MS.gene064527:intron 45.0%
TTCCCCCACTGTCTTAATGT+CGG - chr6.2:87957364-87957383 MS.gene064527:intron 45.0%
TTCCTAGCAACTTTACCGGT+GGG - chr6.2:87961397-87961416 MS.gene064527:intron 45.0%
TTGTTGCAGCAGATGATGCT+CGG - chr6.2:87956859-87956878 MS.gene064527:CDS 45.0%
TTTCCTAGCAACTTTACCGG+TGG - chr6.2:87961396-87961415 MS.gene064527:intron 45.0%
! ATACTGGTTGTAGTCTGCGT+AGG + chr6.2:87961686-87961705 None:intergenic 45.0%
! CATTGGAGGCGGTTCTTTTA+TGG - chr6.2:87956986-87957005 MS.gene064527:intron 45.0%
! GAGGACAATGGCCTTTTGTT+TGG + chr6.2:87958948-87958967 None:intergenic 45.0%
! TCTTTTCCAGTTGTTGGGCT+AGG - chr6.2:87956735-87956754 MS.gene064527:CDS 45.0%
!! GTCCCTGTATTGCATTGACT+TGG + chr6.2:87961426-87961445 None:intergenic 45.0%
!!! GTAAACAGGCATTTTGGAGC+GGG - chr6.2:87958810-87958829 MS.gene064527:intron 45.0%
!!! TAAACAGGCATTTTGGAGCG+GGG - chr6.2:87958811-87958830 MS.gene064527:intron 45.0%
!! ATGAAAATAAAAATAAATTT+CGG - chr6.2:87960446-87960465 MS.gene064527:CDS 5.0%
AAGGATGTCGCAGAAGTTGG+TGG - chr6.2:87958114-87958133 MS.gene064527:intron 50.0%
ACATGCTGTTGATGCTGCAG+TGG - chr6.2:87956920-87956939 MS.gene064527:intron 50.0%
AGAGCGAGTGTTCCACTTGA+AGG + chr6.2:87958237-87958256 None:intergenic 50.0%
AGCAAGGTCTTAACTACGCG+TGG - chr6.2:87961596-87961615 MS.gene064527:CDS 50.0%
AGGATCCGGATCCTTGGTAT+TGG - chr6.2:87960533-87960552 MS.gene064527:CDS 50.0%
AGTGTTCCACTTGAAGGAGG+TGG + chr6.2:87958231-87958250 None:intergenic 50.0%
ATATAGTTGGCCGTTGGACC+AGG + chr6.2:87961784-87961803 None:intergenic 50.0%
ATCATCGTCACCTTGCTGCT+CGG - chr6.2:87960204-87960223 MS.gene064527:intron 50.0%
CAACTGCAGTCTACCTTTGG+AGG + chr6.2:87960498-87960517 None:intergenic 50.0%
CATGCAGCCTGGTTGAAACA+TGG - chr6.2:87957823-87957842 MS.gene064527:intron 50.0%
CATTAGAGGATCCGGATCCT+TGG - chr6.2:87960527-87960546 MS.gene064527:CDS 50.0%
CCCACGCTTTGCAACTTACT+TGG - chr6.2:87957618-87957637 MS.gene064527:intron 50.0%
CGAAGTGATATTGGAGGGTG+AGG + chr6.2:87957244-87957263 None:intergenic 50.0%
CGAGGGAAAAACAGCCAATC+AGG - chr6.2:87956809-87956828 MS.gene064527:CDS 50.0%
CGGTCAGTATGGTGAAAAGC+GGG + chr6.2:87961747-87961766 None:intergenic 50.0%
CTGTGAAGCAGCTAAAGGAG+CGG + chr6.2:87957063-87957082 None:intergenic 50.0%
CTTACTCCTAGCCCAACAAC+TGG + chr6.2:87956744-87956763 None:intergenic 50.0%
CTTGGACAGTTATGGACGTC+CGG - chr6.2:87958393-87958412 MS.gene064527:intron 50.0%
GACCAATTGGTCGGGGTAAT+TGG - chr6.2:87959129-87959148 MS.gene064527:CDS 50.0%
GCAATACAGGGACACAAGCA+GGG - chr6.2:87961433-87961452 MS.gene064527:CDS 50.0%
GGAGCTGGAGGTAGTTTATC+GGG + chr6.2:87958909-87958928 None:intergenic 50.0%
GGGCCACAAGCTTTCTACAA+TGG - chr6.2:87958069-87958088 MS.gene064527:intron 50.0%
GGTAGGATGACCAATTGGTC+GGG - chr6.2:87959121-87959140 MS.gene064527:CDS 50.0%
GGTCTTAGAACGGCGTCTAA+AGG + chr6.2:87959228-87959247 None:intergenic 50.0%
GGTGAGGAAAGTTCCACTAG+TGG + chr6.2:87957228-87957247 None:intergenic 50.0%
GTAAGTGACCCAAGAAAGGG+CGG - chr6.2:87959578-87959597 MS.gene064527:CDS 50.0%
GTAGGATGACCAATTGGTCG+GGG - chr6.2:87959122-87959141 MS.gene064527:CDS 50.0%
GTTTCAACCAGGCTGCATGA+AGG + chr6.2:87957822-87957841 None:intergenic 50.0%
TCGCAAGTCCTATAGCTGGT+TGG + chr6.2:87957873-87957892 None:intergenic 50.0%
TGCAATACAGGGACACAAGC+AGG - chr6.2:87961432-87961451 MS.gene064527:CDS 50.0%
TGGAACACTCGCTCTTTCTC+TGG - chr6.2:87958242-87958261 MS.gene064527:intron 50.0%
TTCTTAGGTGCCTTGTCGGT+GGG - chr6.2:87957775-87957794 MS.gene064527:intron 50.0%
! CAAGCTTCAAGTGGCATTGG+AGG - chr6.2:87956972-87956991 MS.gene064527:intron 50.0%
! CTCCAATGCCACTTGAAGCT+TGG + chr6.2:87956974-87956993 None:intergenic 50.0%
! GTTGTTGGGCTAGGAGTAAG+AGG - chr6.2:87956744-87956763 MS.gene064527:CDS 50.0%
!! AGACGCCGTTCTAAGACCAA+GGG - chr6.2:87959230-87959249 MS.gene064527:intron 50.0%
!! TAGACGCCGTTCTAAGACCA+AGG - chr6.2:87959229-87959248 MS.gene064527:intron 50.0%
ATGGAAGAGTGGACAGGGGT+TGG - chr6.2:87956544-87956563 MS.gene064527:CDS 55.0%
CAGGATGGAAGAGTGGACAG+GGG - chr6.2:87956540-87956559 MS.gene064527:CDS 55.0%
CAGTTATGGACGTCCGGATG+CGG - chr6.2:87958399-87958418 MS.gene064527:intron 55.0%
CATTGCTTTGCAGCCGTCAC+CGG - chr6.2:87960232-87960251 MS.gene064527:intron 55.0%
CGCCAATTACCCCGACCAAT+TGG + chr6.2:87959134-87959153 None:intergenic 55.0%
CGCTCCTTTAGCTGCTTCAC+AGG - chr6.2:87957061-87957080 MS.gene064527:CDS 55.0%
CGGCAACTGCAGTCTACCTT+TGG + chr6.2:87960501-87960520 None:intergenic 55.0%
CTAGTGTTTGCATCCGCCCA+TGG - chr6.2:87960284-87960303 MS.gene064527:CDS 55.0%
CTGGACAACCGCCCTTTCTT+GGG + chr6.2:87959589-87959608 None:intergenic 55.0%
GAAAGCTTGTGGCCCTTCCT+CGG + chr6.2:87958064-87958083 None:intergenic 55.0%
GCAGGATGGAAGAGTGGACA+GGG - chr6.2:87956539-87956558 MS.gene064527:CDS 55.0%
GCGAGTGTTCCACTTGAAGG+AGG + chr6.2:87958234-87958253 None:intergenic 55.0%
GGAATGCCACCTCCTTCAAG+TGG - chr6.2:87958222-87958241 MS.gene064527:CDS 55.0%
GGAGTTCCTGGTGAGTTAGC+TGG - chr6.2:87957796-87957815 MS.gene064527:intron 55.0%
GTTCTTAGGTGCCTTGTCGG+TGG - chr6.2:87957774-87957793 MS.gene064527:intron 55.0%
TCATCGTCACCTTGCTGCTC+GGG - chr6.2:87960205-87960224 MS.gene064527:intron 55.0%
TGAAGGCCAGCTAACTCACC+AGG + chr6.2:87957805-87957824 None:intergenic 55.0%
TGACGGCTGCAAAGCAATGG+TGG + chr6.2:87960231-87960250 None:intergenic 55.0%
TGCAGGATGGAAGAGTGGAC+AGG - chr6.2:87956538-87956557 MS.gene064527:CDS 55.0%
TGCCCACCGGTAAAGTTGCT+AGG + chr6.2:87961402-87961421 None:intergenic 55.0%
TGGAAGAGTGGACAGGGGTT+GGG - chr6.2:87956545-87956564 MS.gene064527:CDS 55.0%
TGGTGTGCAGGATGGAAGAG+TGG - chr6.2:87956533-87956552 MS.gene064527:CDS 55.0%
! GCTTCAAGTGGCATTGGAGG+CGG - chr6.2:87956975-87956994 MS.gene064527:intron 55.0%
!! GATGCTCGGTGTTCTGCAGT+TGG - chr6.2:87956873-87956892 MS.gene064527:CDS 55.0%
!! GCATTGACTTGGTTGCCCAC+CGG + chr6.2:87961415-87961434 None:intergenic 55.0%
ACCAGGAACTCCCACCGACA+AGG + chr6.2:87957788-87957807 None:intergenic 60.0%
CGGGGTCCCCCAAGTTCATT+CGG + chr6.2:87958483-87958502 None:intergenic 60.0%
GCTGGACAACCGCCCTTTCT+TGG + chr6.2:87959590-87959609 None:intergenic 60.0%
GTCGGGGTAATTGGCGCAAG+CGG - chr6.2:87959138-87959157 MS.gene064527:intron 60.0%
GTGGCTGCTGCATTATGCGC+TGG - chr6.2:87956939-87956958 MS.gene064527:intron 60.0%
! CGGTGACGGCTGCAAAGCAA+TGG + chr6.2:87960234-87960253 None:intergenic 60.0%
!! TAGCTGGCCTTCATGCAGCC+TGG - chr6.2:87957812-87957831 MS.gene064527:intron 60.0%
AACGGAGCGACCTCCGGTGA+CGG + chr6.2:87960248-87960267 None:intergenic 65.0%
ACCGGAGGTCGCTCCGTTAC+AGG - chr6.2:87960250-87960269 MS.gene064527:CDS 65.0%
CAATGGTGGCCCGAGCAGCA+AGG + chr6.2:87960217-87960236 None:intergenic 65.0%
GCCTTGTCGGTGGGAGTTCC+TGG - chr6.2:87957784-87957803 MS.gene064527:intron 65.0%
GGACGTCCGGATGCGGCAAA+GGG - chr6.2:87958406-87958425 MS.gene064527:intron 65.0%
GGGGTAATTGGCGCAAGCGG+TGG - chr6.2:87959141-87959160 MS.gene064527:intron 65.0%
TGCTTTGCAGCCGTCACCGG+AGG - chr6.2:87960235-87960254 MS.gene064527:CDS 65.0%
TGGACGTCCGGATGCGGCAA+AGG - chr6.2:87958405-87958424 MS.gene064527:intron 65.0%
! GCCTGTAACGGAGCGACCTC+CGG + chr6.2:87960254-87960273 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 87956516 87961981 87956516 ID=MS.gene064527
chr6.2 mRNA 87956516 87961981 87956516 ID=MS.gene064527.t1;Parent=MS.gene064527
chr6.2 exon 87961936 87961981 87961936 ID=MS.gene064527.t1.exon1;Parent=MS.gene064527.t1
chr6.2 CDS 87961936 87961981 87961936 ID=cds.MS.gene064527.t1;Parent=MS.gene064527.t1
chr6.2 exon 87961415 87961752 87961415 ID=MS.gene064527.t1.exon2;Parent=MS.gene064527.t1
chr6.2 CDS 87961415 87961752 87961415 ID=cds.MS.gene064527.t1;Parent=MS.gene064527.t1
chr6.2 exon 87960234 87960752 87960234 ID=MS.gene064527.t1.exon3;Parent=MS.gene064527.t1
chr6.2 CDS 87960234 87960752 87960234 ID=cds.MS.gene064527.t1;Parent=MS.gene064527.t1
chr6.2 exon 87959880 87960115 87959880 ID=MS.gene064527.t1.exon4;Parent=MS.gene064527.t1
chr6.2 CDS 87959880 87960115 87959880 ID=cds.MS.gene064527.t1;Parent=MS.gene064527.t1
chr6.2 exon 87959505 87959769 87959505 ID=MS.gene064527.t1.exon5;Parent=MS.gene064527.t1
chr6.2 CDS 87959505 87959769 87959505 ID=cds.MS.gene064527.t1;Parent=MS.gene064527.t1
chr6.2 exon 87959234 87959371 87959234 ID=MS.gene064527.t1.exon6;Parent=MS.gene064527.t1
chr6.2 CDS 87959234 87959371 87959234 ID=cds.MS.gene064527.t1;Parent=MS.gene064527.t1
chr6.2 exon 87958884 87959150 87958884 ID=MS.gene064527.t1.exon7;Parent=MS.gene064527.t1
chr6.2 CDS 87958884 87959150 87958884 ID=cds.MS.gene064527.t1;Parent=MS.gene064527.t1
chr6.2 exon 87958122 87958252 87958122 ID=MS.gene064527.t1.exon8;Parent=MS.gene064527.t1
chr6.2 CDS 87958122 87958252 87958122 ID=cds.MS.gene064527.t1;Parent=MS.gene064527.t1
chr6.2 exon 87957021 87957093 87957021 ID=MS.gene064527.t1.exon9;Parent=MS.gene064527.t1
chr6.2 CDS 87957021 87957093 87957021 ID=cds.MS.gene064527.t1;Parent=MS.gene064527.t1
chr6.2 exon 87956516 87956914 87956516 ID=MS.gene064527.t1.exon10;Parent=MS.gene064527.t1
chr6.2 CDS 87956516 87956914 87956516 ID=cds.MS.gene064527.t1;Parent=MS.gene064527.t1
Gene Sequence

>MS.gene064527

ATGTTAGTGCACAAATATGGTGTGCAGGATGGAAGAGTGGACAGGGGTTGGGAATGAGCTCATTGTCATTGAAGGACATACAAATTTAGAGAATGGGGTTGAAGGAATACCTGATAATTTTTTTCGAAGCTGAAAAGCGGCTGAAGAAAGATCAGTCTTTTCGTTGTTTGTTTCATTTATTTATTTACTTTTTCAACCTTATCTTATGCTAAATGCAATTCTTTTCCAGTTGTTGGGCTAGGAGTAAGAGGAAACACAAGTTTTTGGATATTGAAAGGGACAGAAAGATATAACGAGGGAAAAACAGCCAATCAGGCACATGTTATTGAATCGGAACTTGGAGTTGTTGCAGCAGATGATGCTCGGTGTTCTGCAGTTGGTGTTTCAATGCTTAGGCTTGGTGGACATGCTGTTGATGCTGCAGTGGCTGCTGCATTATGCGCTGGTGTTGTTTTCCAAGCTTCAAGTGGCATTGGAGGCGGTTCTTTTATGGTTGTGAAATCTTCTTCTAGCTCCAAAGCACAAGCTTATGATATGAGAGAAACCGCTCCTTTAGCTGCTTCACAGGTTTGAGATTAACTATTTCTGCTACACCATTTAAGAGGTTGAAACTCATGATTAAAAATTGTTGAATCGATTTCGCAAAATTAAGATACATTGTATGATTGCAGATTCTGTATATGTTTTTCCGAAAGAAATAAGAAACTCTCCACTAGTGGAACTTTCCTCACCCTCCAATATCACTTCGGATGCACACATTTGGTGAAAAACGTGAATTTTGTACTGTCCGGAAGTACGCTTCCGAAAATAGTTGTGGTGTTTTTAGAAATGTAGCGGGTGGAGAAAGTTTCCCCCACTGTCTTAATGTCGGTAGACTAAGTCATATCGACTATATCATATAAATCTTTGTTTCTTGTTTTTCCTTCTCTTCCCTTTGATCTTTTCTGTTGTTTATTCATCTATGTTTACAAATTCTTAATTCATGTTGTGGAAAATTTCTATGACACGAAATATGAAAAAATTTGAATTTAACATGACATTTTCTTGTTATGTTCTTTGAGATACTGCCATTAAAACTTCATTTCTGAAAAGAACGAAACATCCCACGCTTTGCAACTTACTTGGACATATTGAAAGCTAGCAGATAATATATCATTTTGATCATTTTCCTTTGCAGAAATCTACAAAAATGCAACTTACATTTGTGTAAATGTTTACTGTAAAAGCAGAATATGTATCAAACCGATCCCGAAGCTAAGTTCTTAGGTGCCTTGTCGGTGGGAGTTCCTGGTGAGTTAGCTGGCCTTCATGCAGCCTGGTTGAAACATGGAAGATTGCCATGGAAGACCTTATTCCAACCAGCTATAGGACTTGCGAAAAATGGTTTCACAGTGTCTCCTACACTCGAAGAATACCTAGCTAATGATGAAAAAAAGATAATGAGCGATCCTGGGTTAAGAAATATTTATGCACCTAATGGAACTTTGTTAAAAGGAGGGGAGATGTGTAGTAATATAGAACTTGGGAAAAGCTTAGAGATATTGGCCGAGGAAGGGCCACAAGCTTTCTACAATGGAACCATTGGTGAGAAGTTAGTAAAGGATGTCGCAGAAGTTGGTGGTATTTTAACTGTGGAGGATTTACGAAATTACAAGGTGGAAATTACTGATGCAATGACTGTCAATGTAATGGGATATACTATACATGGAATGCCACCTCCTTCAAGTGGAACACTCGCTCTTTCTCTGGTTTGTACATTGATATCCCTTCTGTACTCGATGATATTTCCATGTTGTTACGTAGAAACATGACCTTATCCTATATTTGTATGCTTGTATTGTATATTCTAATGGTTAGTATGAACAGGTCCTAAACATCTTGGACAGTTATGGACGTCCGGATGCGGCAAAGGGAAATTTAGGTATTCATAGACTAATAGAAGCTTTGAAACACACGTTTGCTATCCGAATGAACTTGGGGGACCCCGACTTTGAAAATATTAGTGCAACTTCATCCGAAATGCTTTCCAAATCTTTTGCACAAACTATTCAGCGCCAAATACTCGATAACACGACATTCCCTCCAGATTACTATATGGACAGGTGTGGTATACTCTGTTGGTTGAAGTAATTTAAATTTCAATGAAAACTATACGTTTTGCTTGATATGTTGCAAACTAACTAAGTTGTTGTTTTATATGCATTGCATGCAGGTGGAGCCAACTTAGAGATCATGGAACAAGCCATACATGTGTTGTAGATGCCGATAGAAATGCGGTATCACTGACAACAACTGTAAACAGGCATTTTGGAGCGGGGATTCGTTCTACTTCAACTGGTATTGTCGTCAATGATGAAATGGATGACTTCTCCACACCTACTGATATATCTCCCGATAAACTACCTCCAGCTCCAACAAACTTTATTGAACCAAACAAAAGGCCATTGTCCTCCATGACTCCTATTATCATTACAAAGGTATTGTTTGCAGCATCTTTACTTGATGTGATATAGACATAAGCACACAATTTTCGCATGATAAAGTCGTGAAAAATTTATTACAAGATTATCTATGGTTGGATTCATACACTTCATTTTGTTGCTTTGGTAGGATGACCAATTGGTCGGGGTAATTGGCGCAAGCGGTGGAATGAGTATTATTCCAGCAGTGACTCAAGTATTTCTTAATCATTTCATCTTAGGAATGAAACCTTTAGACGCCGTTCTAAGACCAAGGGTCTATACCAAGGTTCTAACTCCTTTGTATTGAAATAGTTTCTTTATGTATGATGCTCCTAACTACAATCTAATTGTGATCTCTATCTTATGTAGCTATTACCGGATACAGTTTCCTATGAAAACTTGATTGATCGTGACGGTGGTCACATCGAGCTTTCAGAAGAAAGTAGGCTTTTCCTGAAAGAAAGAGGTCATCAACTGTGTGCATGTCAAGGACAATCTATTACTCAACTTATTGTTCATACTCCCAAAACACCTTTGAACATTAATAGGAAAATTGGTGAAAACATCGATTTGCATGTAAAGCGCGGCACTCTAACAGCAGTAAGTGACCCAAGAAAGGGCGGTTGTCCAGCTGCAGTATAAATAAATCAATTCATCTATTGTTTAAATCGATCAATTCATATTGATCAAAAATGTCAATATATAAATTCATTATTTAACCGGAACATTTGTCCGGTCATTGTTACAATCTATTCATGTATAGTGCTTTTTCGAAGCTATTTCTGGAAGGATGAATAAAGTGTTTGGATTAGTTCTTTTGAGTGCACTTTGTAAATTATTTAATACTTGAGTATTCATATTAAGTTTCTTTTGTAACATTTGAGTTTTAAATTTAAAAAAAATTGCAACTTTTATTGGTTCATGCTAAAGAAAACAAAATCAATAAAGAATTTTTATTTGATTAAATGTGCCAAAGTAAAAGACAAATTACATGGATTTAGTCAAGAATCTAATTTCAATCAAAAGCTGCTGCAGCTTCTAAGGTTCATGCTCAAACTTTGCACCTTAAAGGAAACACTAGAGTGCATTTCACTCGTTTTTCACCGTCTGATGATTAAGATCACTAAGATAACGCCATTTAGCCAAAAAATTTACAAAGAAAACTAAAACATAAAATGGTCGAAAACACATCAACCATAAATACTCTAATCCTTTTTCCGTCTCTGATCATCGTCACCTTGCTGCTCGGGCCACCATTGCTTTGCAGCCGTCACCGGAGGTCGCTCCGTTACAGGCCAAGTTTCTACTAGTGTTTGCATCCGCCCATGGTTCTAGTTTTCCTAACTTAGCATTTGCATCAACACAACCTGTTTTCATACTTCACATCATAAAGCACATGTAATGGTTTTCATGCTTCCTTGACTTTTTATTGTCAATATCTTATTAATTCTCCCATGCTTCTTATATAATGAAAATAAAAATAAATTTCGGGCATTAGATTTCTCAGACGATAGAATCCTCCAAAGGTAGACTGCAGTTGCCGCAAAAACATTAGAGGATCCGGATCCTTGGTATTGGTTAAAGACAATCTTTCAGACATTGGTATTGACTAAGGTTCATACGATGATAATCAACATAACTGGAAAAAATTCCATCCAATTTGGATTGTCAATCGAACTCGAAAAAAAAAACCAGAATGACATTAATCACTACATGTGAAAACCTTCCAAAACTCATCATAGCCTAAGTCACAAATAATAGGCTGCCAAAAGACTACCAATTTATATGATATGCTGAACAACTATTTTCCTTCTATCTGACATGAATATTATATCTTGATCATTAGATTAATGTGACAGTGAAAAATTGGCAGCAAATGAAGTATACCAACACAATTAATGTAAAAGGTAGAAAATATATTCATTAGCATTTATCAAAAAAACATTACATATTATGTAATATCCAACAATGAAGAATTTGGTCCATGTCCATTTTGATAAAAGCTTGTGTGATTCTCACTTCTTGTTCATGTCCATTTGCCTAAGCTATTTTTTTTATCAGGAACTAGAAGTGGAATTGAAAACACACCCTTGCGTCAGTCACCTAATCATCACCTAATCAAAGTAAATGCAAATAGTTCATGCAAAAAACAAACTAATCATCACCTAATCAAAGTAAATGCAAATAGTGCATGCAAGAAACAAACTAGCATAAATACCATAACAATGCTTCGTACTTTCTTCATTCACCATTACGACGATGAATACGATTTATTTTTTCATATGCTTATGTTTACTCATACCTTTTACAATAGGACAGTATGAGTACTTTGTTTTACAAGAGCAGTGGCCATTAGAATATTGCATGAATAACTATTGTACCAAACCTCCAGAATATAGCTTTATAATCGATGGATTGTTTCCTAGCAACTTTACCGGTGGGCAACCAAGTCAATGCAATACAGGGACACAAGCAGGGCAATCACTGTCACCACAAGATGTAAGTAACTTGATCTCTATAAAATTGATTTTTATAAATTTGCTTTATAATTTTTTTGCTTTAGTCATCTAAATTTTTTATAACTTGATTTCTTGATATTTTATAGGTTTCTTCGATAAAGCAAGGTCTTAACTACGCGTGGATCAATTACAGTGGTGACAATTTTCAGTTTTGGTCTAAACAATGGGATACTCATGGCACTTGTTCCTACGCAGACTACAACCAGTATCAATTTTTTGATTTGGCGTTGACGATTTACTTTCGACACCCGCTTTTCACCATACTGACCGATCTTCAAATCAAGCCTGGTCCAACGGCCAACTATATAACAAGGGAGGTTGCGAATCTACTAAAAAGGGTAACTGGTTTTTACCCACGACTTAGTTGCTATAATGGCAGATTAGTAGCAATTGGCATTTGTGTGGATGCAAATGGAGATGGAATAGATTGTAATCCCTTCAATAATAACTGTGGAAACAGCTTTCTTTGGTGGGCGCCGCCTTAA
Protein sequence

>MS.gene064527.t1

MLVHKYGVQDGRVDRVVGLGVRGNTSFWILKGTERYNEGKTANQAHVIESELGVVAADDARCSAVGVSMLRLGGHAVDAAVAAALCAGVVFQASSGIGGGSFMVVKSSSSSKAQAYDMRETAPLAASQNMYQTDPEAKFLGALSVGVPGELAGLHAAWLKHGRLPWKTLFQPAIGLAKNGFTVSPTLEEYLANDEKKIMSDPGLRNIYAPNGTLLKGGEMCSNIELGKSLEILAEEGPQAFYNGTIGEKLVKDVAEVGGILTVEDLRNYKVEITDAMTVNVMGYTIHGMPPPSSGTLALSLVLNILDSYGRPDAAKGNLGIHRLIEALKHTFAIRMNLGDPDFENISATSSEMLSKSFAQTIQRQILDNTTFPPDYYMDRWSQLRDHGTSHTCVVDADRNAVSLTTTVNRHFGAGIRSTSTGIVVNDEMDDFSTPTDISPDKLPPAPTNFIEPNKRPLSSMTPIIITKDDQLVGVIGASGGMSIIPAVTQVFLNHFILGMKPLDAVLRPRVYTKLLPDTVSYENLIDRDGGHIELSEESRLFLKERGHQLCACQGQSITQLIVHTPKTPLNINRKIGENIDLHVKRGTLTAVSDPRKGGCPAAPSPEVAPLQAKFLLVFASAHGSSFPNLAFASTQPVFILHIIKHINFTGGQPSQCNTGTQAGQSLSPQDVSSIKQGLNYAWINYSGDNFQFWSKQWDTHGTCSYADYNQYQFFDLALTIYFRHPLFTILTDLQIKPGPTANYITREVANLLKRVTGFYPRLSCYNGRLVAIGICVDANGDGIDCNPFNNNCGNSFLWWAPP