Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41579.t1 | KEH34407.1 | 86.9 | 572 | 48 | 2 | 1 | 545 | 6 | 577 | 1.80E-281 | 978 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41579.t1 | Q680I5 | 55.3 | 571 | 221 | 8 | 4 | 544 | 11 | 577 | 6.2e-174 | 612.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41579.t1 | A0A072UXY0 | 86.9 | 572 | 48 | 2 | 1 | 545 | 6 | 577 | 1.3e-281 | 978.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene41579 | MS.gene67840 | PPI |
| MS.gene070507 | MS.gene41579 | PPI |
| MS.gene81620 | MS.gene41579 | PPI |
| MS.gene38520 | MS.gene41579 | PPI |
| MS.gene81615 | MS.gene41579 | PPI |
| MS.gene013833 | MS.gene41579 | PPI |
| MS.gene66373 | MS.gene41579 | PPI |
| MS.gene013831 | MS.gene41579 | PPI |
| MS.gene070492 | MS.gene41579 | PPI |
| MS.gene016742 | MS.gene41579 | PPI |
| MS.gene070510 | MS.gene41579 | PPI |
| MS.gene81622 | MS.gene41579 | PPI |
| MS.gene045074 | MS.gene41579 | PPI |
| MS.gene75436 | MS.gene41579 | PPI |
| MS.gene016743 | MS.gene41579 | PPI |
| MS.gene41579 | MS.gene070511 | PPI |
| MS.gene37911 | MS.gene41579 | PPI |
| MS.gene057884 | MS.gene41579 | PPI |
| MS.gene057883 | MS.gene41579 | PPI |
| MS.gene008569 | MS.gene41579 | PPI |
| MS.gene016758 | MS.gene41579 | PPI |
| MS.gene41579 | MS.gene030326 | PPI |
| MS.gene81617 | MS.gene41579 | PPI |
| MS.gene070505 | MS.gene41579 | PPI |
| MS.gene064527 | MS.gene41579 | PPI |
| MS.gene049472 | MS.gene41579 | PPI |
| MS.gene75036 | MS.gene41579 | PPI |
| MS.gene057886 | MS.gene41579 | PPI |
| MS.gene070509 | MS.gene41579 | PPI |
| MS.gene070503 | MS.gene41579 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41579.t1 | MTR_3g466000 | 86.786 | 560 | 47 | 2 | 13 | 545 | 18 | 577 | 0.0 | 938 |
| MS.gene41579.t1 | MTR_3g087950 | 69.459 | 573 | 144 | 4 | 4 | 545 | 10 | 582 | 0.0 | 774 |
| MS.gene41579.t1 | MTR_6g090280 | 46.032 | 567 | 265 | 9 | 19 | 545 | 58 | 623 | 2.15e-153 | 453 |
| MS.gene41579.t1 | MTR_6g090280 | 44.958 | 476 | 223 | 7 | 108 | 545 | 1 | 475 | 4.45e-135 | 400 |
| MS.gene41579.t1 | MTR_6g090280 | 48.492 | 431 | 202 | 5 | 19 | 430 | 58 | 487 | 4.45e-127 | 381 |
| MS.gene41579.t1 | MTR_5g084180 | 74.757 | 103 | 24 | 2 | 6 | 106 | 20 | 122 | 1.80e-25 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41579.t1 | AT4G39640 | 55.401 | 574 | 221 | 7 | 1 | 544 | 3 | 571 | 0.0 | 632 |
| MS.gene41579.t1 | AT4G39640 | 55.401 | 574 | 221 | 7 | 1 | 544 | 3 | 571 | 0.0 | 632 |
| MS.gene41579.t1 | AT4G39650 | 55.517 | 571 | 220 | 8 | 4 | 544 | 11 | 577 | 0.0 | 612 |
| MS.gene41579.t1 | AT4G29210 | 45.760 | 566 | 262 | 10 | 24 | 545 | 73 | 637 | 1.48e-162 | 477 |
| MS.gene41579.t1 | AT4G29210 | 47.344 | 433 | 208 | 6 | 24 | 437 | 73 | 504 | 8.68e-136 | 404 |
| MS.gene41579.t1 | AT1G69820 | 58.257 | 218 | 63 | 4 | 277 | 466 | 2 | 219 | 3.80e-81 | 253 |
Find 147 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTCCATTGCTTCCATAAA+TGG | 0.167462 | 3.1:-50303545 | MS.gene41579:CDS |
| AAACTTCCTTCAGACCTTTC+TGG | 0.189248 | 3.1:-50301594 | MS.gene41579:CDS |
| AAACATTTGTAACTATAAAT+TGG | 0.238649 | 3.1:+50300513 | None:intergenic |
| GTTTAGCAGTGTATCGTTTA+AGG | 0.249177 | 3.1:+50302250 | None:intergenic |
| GTGGAGCATTTATGCTTCTT+AGG | 0.259055 | 3.1:-50303346 | MS.gene41579:CDS |
| CAGACCTTTCTGGCGCCCTT+GGG | 0.270126 | 3.1:-50301584 | MS.gene41579:CDS |
| GTGGCTGCTGCTTTATGTTT+GGG | 0.285572 | 3.1:-50303401 | MS.gene41579:CDS |
| TGTGGCTGCTGCTTTATGTT+TGG | 0.292345 | 3.1:-50303402 | MS.gene41579:CDS |
| GGACATGGCCCCTGCTTCTA+AGG | 0.295256 | 3.1:+50300564 | None:intergenic |
| TCATTGCCTCAATTTGTCTA+TGG | 0.296458 | 3.1:+50301559 | None:intergenic |
| AAACATAGAAAGAACCTTTA+GGG | 0.308155 | 3.1:+50301122 | None:intergenic |
| CTAAGTATGCCTCCTCCTTC+AGG | 0.310743 | 3.1:-50302186 | MS.gene41579:CDS |
| ACAAATGTTTCAGACCATTC+TGG | 0.311051 | 3.1:-50300500 | MS.gene41579:CDS |
| TCAGACCTTTCTGGCGCCCT+TGG | 0.317407 | 3.1:-50301585 | MS.gene41579:CDS |
| GTCCGACATTGTTCTAAAAT+CGG | 0.329897 | 3.1:-50303467 | MS.gene41579:CDS |
| CTAGTGATATTTACAAAATC+AGG | 0.348284 | 3.1:+50301501 | None:intergenic |
| TGGTCTAGCAATAGCAGTTC+CGG | 0.349888 | 3.1:-50302622 | MS.gene41579:CDS |
| TATGGTCCAAATGCTTTCTA+TGG | 0.358152 | 3.1:-50302339 | MS.gene41579:CDS |
| TTTCGCAGCTAATACCAAAC+TGG | 0.359857 | 3.1:-50300655 | MS.gene41579:intron |
| TAGGGCAATAGTTGGTGATA+TGG | 0.367941 | 3.1:+50301140 | None:intergenic |
| CAACTTACCAGCATCGTTAC+AGG | 0.373723 | 3.1:+50302159 | None:intergenic |
| TTCAATATTATTCCAGTACT+TGG | 0.375460 | 3.1:+50301267 | None:intergenic |
| CCTGCCAACTTTGTCGCGCC+AGG | 0.383292 | 3.1:-50301180 | MS.gene41579:CDS |
| CATGTCCTAAAACCCTTTGC+TGG | 0.390693 | 3.1:-50300548 | MS.gene41579:CDS |
| CCAAGAAAATCAATAGATAT+AGG | 0.401064 | 3.1:+50302219 | None:intergenic |
| CTAAGAGTGATTTCAAAGTA+TGG | 0.401738 | 3.1:-50302357 | MS.gene41579:CDS |
| GCAGTTCCGGGAGAACTTGC+TGG | 0.413064 | 3.1:-50302609 | MS.gene41579:CDS |
| ATCTCATAACTAACCCAGTT+TGG | 0.417128 | 3.1:+50300641 | None:intergenic |
| ATGCTTCTTAGGTTAGCTAA+TGG | 0.432318 | 3.1:-50303335 | MS.gene41579:CDS |
| GGTCCACCATAGAAAGCATT+TGG | 0.433494 | 3.1:+50302333 | None:intergenic |
| ACTTTGAGTACTAATCAATA+TGG | 0.435171 | 3.1:-50301411 | MS.gene41579:intron |
| CTAATCAATATGGTGGCAAA+TGG | 0.435623 | 3.1:-50301401 | MS.gene41579:CDS |
| GGCTCCAAGGTTCTATCATC+AGG | 0.438235 | 3.1:-50300834 | MS.gene41579:intron |
| AAGTTCCTTTCACCAAGTAC+TGG | 0.441783 | 3.1:-50301279 | MS.gene41579:CDS |
| TGGAGGGGCAAACATTATTC+CGG | 0.442852 | 3.1:-50300917 | MS.gene41579:CDS |
| AAAGATGTTCAGAAGGCTAA+AGG | 0.454055 | 3.1:-50302291 | MS.gene41579:CDS |
| GAAGGAAAACCACCCTTTCT+CGG | 0.454525 | 3.1:+50300437 | None:intergenic |
| CATTAAACGGCTTCATTCCA+TGG | 0.455284 | 3.1:+50300864 | None:intergenic |
| TATGCTATGAGAATGAATAT+TGG | 0.455314 | 3.1:-50301528 | MS.gene41579:CDS |
| CACCGTTGTTTGTTCCAGAA+TGG | 0.461211 | 3.1:+50300486 | None:intergenic |
| ATCACCAACTATTGCCCTAA+AGG | 0.461822 | 3.1:-50301136 | MS.gene41579:intron |
| ACTGGGTTAGTTATGAGATC+TGG | 0.462039 | 3.1:-50300637 | MS.gene41579:CDS |
| TGGCTGCTGCTTTATGTTTG+GGG | 0.464960 | 3.1:-50303400 | MS.gene41579:CDS |
| AGTTCAAAGTGTTCACCATA+TGG | 0.465251 | 3.1:+50300608 | None:intergenic |
| AACAACATGGTAAGCTTCCA+TGG | 0.466710 | 3.1:-50302569 | MS.gene41579:CDS |
| CCATGCAGTGGATGCAGTTG+TGG | 0.467448 | 3.1:-50303420 | MS.gene41579:CDS |
| AGTCCAGGTTCAAGTGGTAT+TGG | 0.471417 | 3.1:-50303371 | MS.gene41579:CDS |
| TCCTAAAACCCTTTGCTGGT+GGG | 0.471834 | 3.1:-50300544 | MS.gene41579:CDS |
| TCCGACATTGTTCTAAAATC+GGG | 0.472038 | 3.1:-50303466 | MS.gene41579:CDS |
| AATACTACTTTGAAGTCAAT+AGG | 0.472553 | 3.1:-50302645 | MS.gene41579:CDS |
| GAACATCTTTAACTAGATTG+AGG | 0.476087 | 3.1:+50302304 | None:intergenic |
| CCTAAAACCCTTTGCTGGTG+GGG | 0.481001 | 3.1:-50300543 | MS.gene41579:CDS |
| GAAGCTCCTCCGCGATCAGA+TGG | 0.484080 | 3.1:-50302493 | MS.gene41579:CDS |
| GTCCTAAAACCCTTTGCTGG+TGG | 0.484388 | 3.1:-50300545 | MS.gene41579:CDS |
| TCAGAGAATTCCTTAGAAGC+AGG | 0.484703 | 3.1:-50300574 | MS.gene41579:CDS |
| ACGATACACTGCTAAACAAA+AGG | 0.486357 | 3.1:-50302244 | MS.gene41579:CDS |
| GGTTCAAGTGGTATTGGTGG+TGG | 0.486626 | 3.1:-50303365 | MS.gene41579:CDS |
| CCAGGTTCAAGTGGTATTGG+TGG | 0.488566 | 3.1:-50303368 | MS.gene41579:CDS |
| CAAATTGCCCCACCAGCAAA+GGG | 0.489041 | 3.1:+50300536 | None:intergenic |
| CTTCCCTGGCGCGACAAAGT+TGG | 0.489876 | 3.1:+50301176 | None:intergenic |
| GCGACAAAGTTGGCAGGAGC+TGG | 0.489883 | 3.1:+50301186 | None:intergenic |
| GGTCTAGCAATAGCAGTTCC+GGG | 0.493839 | 3.1:-50302621 | MS.gene41579:CDS |
| GCAAATTGCCCCACCAGCAA+AGG | 0.496917 | 3.1:+50300535 | None:intergenic |
| GCTTTCTATGGTGGACCGAT+TGG | 0.498691 | 3.1:-50302327 | MS.gene41579:CDS |
| CCACCAATACCACTTGAACC+TGG | 0.498702 | 3.1:+50303368 | None:intergenic |
| CTACGAGCAATTATCTCAGC+AGG | 0.499103 | 3.1:+50302531 | None:intergenic |
| TTGTCCATTTATGGAAGCAA+TGG | 0.501163 | 3.1:+50303541 | None:intergenic |
| GGCAGTCAGTGATCCGAGAA+AGG | 0.502271 | 3.1:-50300450 | MS.gene41579:CDS |
| GTTGGTGATATGGATGATAA+TGG | 0.505734 | 3.1:+50301150 | None:intergenic |
| AAGATGTTCAGAAGGCTAAA+GGG | 0.506670 | 3.1:-50302290 | MS.gene41579:CDS |
| TTTATGAATCACTTTGTCCA+TGG | 0.508041 | 3.1:-50300881 | MS.gene41579:CDS |
| CTATTATACAATAAGAAACT+AGG | 0.508879 | 3.1:-50302387 | MS.gene41579:CDS |
| TAATGAACGACAAAGGTCTT+CGG | 0.509200 | 3.1:-50302452 | MS.gene41579:CDS |
| AGAACCTTTAGGGCAATAGT+TGG | 0.509201 | 3.1:+50301132 | None:intergenic |
| AGACCTTTCTGGCGCCCTTG+GGG | 0.511666 | 3.1:-50301583 | MS.gene41579:CDS |
| CTGAAGGAGGAGGCATACTT+AGG | 0.513436 | 3.1:+50302187 | None:intergenic |
| GAGATCTGGACAACTCCATA+TGG | 0.513769 | 3.1:-50300623 | MS.gene41579:CDS |
| TTAACTAGATTGAGGCCAAT+CGG | 0.513933 | 3.1:+50302312 | None:intergenic |
| CATGGAAATCTCTTGAAAGT+AGG | 0.514136 | 3.1:-50302414 | MS.gene41579:CDS |
| GGAGCCGTGACAGCATTAAA+CGG | 0.515088 | 3.1:+50300851 | None:intergenic |
| GATGATAATGGTCTCTTCCC+TGG | 0.515652 | 3.1:+50301162 | None:intergenic |
| CGGAGTGTGTTTGCACCACA+TGG | 0.519127 | 3.1:-50302432 | MS.gene41579:CDS |
| GGCTGCTGCTTTATGTTTGG+GGG | 0.520078 | 3.1:-50303399 | MS.gene41579:CDS |
| AGGAATTCTCTGATATCAGC+AGG | 0.528201 | 3.1:+50300584 | None:intergenic |
| TGCATTTATGGTACACGTCA+AGG | 0.528660 | 3.1:+50301314 | None:intergenic |
| CTGAGATAATTGCTCGTAGA+GGG | 0.531028 | 3.1:-50302527 | MS.gene41579:CDS |
| GGACCCCAAGGGCGCCAGAA+AGG | 0.533287 | 3.1:+50301580 | None:intergenic |
| TATGGTACACGTCAAGGAAA+CGG | 0.534176 | 3.1:+50301320 | None:intergenic |
| GGGATGGATGTTATCCATGA+AGG | 0.543035 | 3.1:-50303446 | MS.gene41579:CDS |
| AATACCACTTGAACCTGGAC+TGG | 0.543182 | 3.1:+50303373 | None:intergenic |
| AGGTGGACCTGTAACGATGC+TGG | 0.544589 | 3.1:-50302166 | MS.gene41579:intron |
| CCTGGCGCGACAAAGTTGGC+AGG | 0.546658 | 3.1:+50301180 | None:intergenic |
| TTCGCAGCTAATACCAAACT+GGG | 0.547751 | 3.1:-50300654 | MS.gene41579:intron |
| TGGAATCAGATCAATGATCA+TGG | 0.548192 | 3.1:-50301381 | MS.gene41579:CDS |
| CTGCCAACTTTGTCGCGCCA+GGG | 0.552264 | 3.1:-50301179 | MS.gene41579:CDS |
| TGAAGGCCAGCAAGTTCTCC+CGG | 0.555393 | 3.1:+50302603 | None:intergenic |
| GGTCCAAATGCTTTCTATGG+TGG | 0.556486 | 3.1:-50302336 | MS.gene41579:CDS |
| GGCTTTACAAGTCTCGCCCA+TGG | 0.557354 | 3.1:+50302552 | None:intergenic |
| GTTGTTTCCACGCCATGTGA+AGG | 0.557616 | 3.1:+50302586 | None:intergenic |
| AAGTTGGCAGGAGCTGGTGG+TGG | 0.557997 | 3.1:+50301192 | None:intergenic |
| AGAACTTGCTGGCCTTCACA+TGG | 0.561466 | 3.1:-50302598 | MS.gene41579:CDS |
| CAATTTGTCTATGGACCCCA+AGG | 0.564162 | 3.1:+50301568 | None:intergenic |
| AATAATATTGAACAATGAGA+TGG | 0.567223 | 3.1:-50301256 | MS.gene41579:CDS |
| TGGGGTCCATAGACAAATTG+AGG | 0.568572 | 3.1:-50301565 | MS.gene41579:CDS |
| GTTAGCTAATGGTGCAGCAA+AGG | 0.570001 | 3.1:-50303324 | MS.gene41579:CDS |
| GTATCGTTTAAGGTCTTCCA+CGG | 0.570359 | 3.1:+50302260 | None:intergenic |
| GCAGTCAGTGATCCGAGAAA+GGG | 0.571477 | 3.1:-50300449 | MS.gene41579:CDS |
| TTGCTGGCCTTCACATGGCG+TGG | 0.579240 | 3.1:-50302593 | MS.gene41579:CDS |
| TTATTCCAGTACTTGGTGAA+AGG | 0.579633 | 3.1:+50301274 | None:intergenic |
| GGATGGATGTTATCCATGAA+GGG | 0.581232 | 3.1:-50303445 | MS.gene41579:CDS |
| TCTAGTTAAAGATGTTCAGA+AGG | 0.582689 | 3.1:-50302298 | MS.gene41579:CDS |
| CCACAACTGCATCCACTGCA+TGG | 0.584510 | 3.1:+50303420 | None:intergenic |
| TTAATGCTGTCACGGCTCCA+AGG | 0.585604 | 3.1:-50300847 | MS.gene41579:CDS |
| GTTGCCAGTCCAGGTTCAAG+TGG | 0.588058 | 3.1:-50303377 | MS.gene41579:CDS |
| CAGAGAATTCCTTAGAAGCA+GGG | 0.589836 | 3.1:-50300573 | MS.gene41579:CDS |
| ACATTATTCCGGAACAGCAG+AGG | 0.591193 | 3.1:-50300906 | MS.gene41579:CDS |
| CAACGGTGTTAGAAAGATTG+TGG | 0.591538 | 3.1:-50300471 | MS.gene41579:CDS |
| CACATGGCGTGGAAACAACA+TGG | 0.592237 | 3.1:-50302582 | MS.gene41579:CDS |
| TATACCTGATGATAGAACCT+TGG | 0.593171 | 3.1:+50300830 | None:intergenic |
| ACAAAGTTGGCAGGAGCTGG+TGG | 0.593176 | 3.1:+50301189 | None:intergenic |
| AGTATGCCTCCTCCTTCAGG+TGG | 0.596225 | 3.1:-50302183 | MS.gene41579:CDS |
| ATCGTTACAGGTCCACCTGA+AGG | 0.596421 | 3.1:+50302171 | None:intergenic |
| AGCGGTTTCTCTCATATCAA+AGG | 0.598918 | 3.1:+50303301 | None:intergenic |
| GTCAGTGATCCGAGAAAGGG+TGG | 0.605438 | 3.1:-50300446 | MS.gene41579:CDS |
| CTTAAAAGCACGAAGAGGAG+CGG | 0.606169 | 3.1:+50303283 | None:intergenic |
| AATGAAGTAATCGCTCATCA+TGG | 0.608619 | 3.1:-50303506 | MS.gene41579:CDS |
| AATAGTAGGTGCAAGTGGAG+GGG | 0.613136 | 3.1:-50300932 | MS.gene41579:intron |
| TTTACCTTAAAAGCACGAAG+AGG | 0.613255 | 3.1:+50303278 | None:intergenic |
| ACAGGTCCACCTGAAGGAGG+AGG | 0.614345 | 3.1:+50302177 | None:intergenic |
| GAAGCCGTTTAATGCTGTCA+CGG | 0.619903 | 3.1:-50300855 | MS.gene41579:CDS |
| GAAATGTCTCAAACACCTGA+AGG | 0.619995 | 3.1:+50300419 | None:intergenic |
| AGAACAATGTCGGACATCAG+TGG | 0.624357 | 3.1:+50303475 | None:intergenic |
| GATGGATGTTATCCATGAAG+GGG | 0.628365 | 3.1:-50303444 | MS.gene41579:CDS |
| AGAGAATTCCTTAGAAGCAG+GGG | 0.628550 | 3.1:-50300572 | MS.gene41579:CDS |
| ACATTGTTCTAAAATCGGGA+TGG | 0.633366 | 3.1:-50303462 | MS.gene41579:CDS |
| TTGAGTACTAATCAATATGG+TGG | 0.636987 | 3.1:-50301408 | MS.gene41579:intron |
| AGGGCGCCAGAAAGGTCTGA+AGG | 0.639518 | 3.1:+50301588 | None:intergenic |
| ACAACATGGTAAGCTTCCAT+GGG | 0.640600 | 3.1:-50302568 | MS.gene41579:CDS |
| GGCTAAAGGGATATTAACCG+TGG | 0.641398 | 3.1:-50302277 | MS.gene41579:CDS |
| GACCATTCTGGAACAAACAA+CGG | 0.658986 | 3.1:-50300488 | MS.gene41579:CDS |
| ACAGATATAATGAACGACAA+AGG | 0.666346 | 3.1:-50302459 | MS.gene41579:CDS |
| GCTGAGATAATTGCTCGTAG+AGG | 0.669882 | 3.1:-50302528 | MS.gene41579:CDS |
| GTTACAGGTCCACCTGAAGG+AGG | 0.671439 | 3.1:+50302174 | None:intergenic |
| ACTACTTTGAAGTCAATAGG+TGG | 0.699074 | 3.1:-50302642 | MS.gene41579:CDS |
| ATGGATGTTATCCATGAAGG+GGG | 0.704860 | 3.1:-50303443 | MS.gene41579:CDS |
| AATTTGTCTATGGACCCCAA+GGG | 0.739993 | 3.1:+50301569 | None:intergenic |
| ACTTTCAAGAGATTTCCATG+TGG | 0.774772 | 3.1:+50302417 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATAAGAAAAATTTAGA+CGG | - | chr3.1:50300806-50300825 | MS.gene41579:intron | 10.0% |
| !!! | TTTTATTTATATTTCAAACT+CGG | - | chr3.1:50301907-50301926 | MS.gene41579:intron | 10.0% |
| !! | AAACATTTGTAACTATAAAT+TGG | + | chr3.1:50303495-50303514 | None:intergenic | 15.0% |
| !! | TTTAATGATTATAAAATCCA+TGG | + | chr3.1:50301939-50301958 | None:intergenic | 15.0% |
| !! | TTTATTTATATTTCAAACTC+GGG | - | chr3.1:50301908-50301927 | MS.gene41579:intron | 15.0% |
| !!! | AAAAATACATTTAAGCTTTT+AGG | - | chr3.1:50303260-50303279 | MS.gene41579:intron | 15.0% |
| !!! | AAATTTTTTTTCTCATAAAG+TGG | + | chr3.1:50302027-50302046 | None:intergenic | 15.0% |
| !!! | TAATTTTCTCAAATTATTAG+TGG | - | chr3.1:50301157-50301176 | MS.gene41579:CDS | 15.0% |
| !! | AAGAAAAAAAACATGAAGTA+GGG | + | chr3.1:50302314-50302333 | None:intergenic | 20.0% |
| !! | AATAATATTGAACAATGAGA+TGG | - | chr3.1:50302749-50302768 | MS.gene41579:intron | 20.0% |
| !! | CTATTATACAATAAGAAACT+AGG | - | chr3.1:50301618-50301637 | MS.gene41579:CDS | 20.0% |
| !! | TAAGAAAAAAAACATGAAGT+AGG | + | chr3.1:50302315-50302334 | None:intergenic | 20.0% |
| !!! | ATGTACTTTTTATCAATGAA+AGG | - | chr3.1:50302335-50302354 | MS.gene41579:CDS | 20.0% |
| !!! | ATTTAGTGACGAAAATATTT+TGG | - | chr3.1:50300887-50300906 | MS.gene41579:CDS | 20.0% |
| !!! | GAAATCTAAAACACTAATTT+TGG | + | chr3.1:50302193-50302212 | None:intergenic | 20.0% |
| !!! | TGTACTTTTTATCAATGAAA+GGG | - | chr3.1:50302336-50302355 | MS.gene41579:CDS | 20.0% |
| !!! | TTAACCACATTAGTTTTTTT+TGG | - | chr3.1:50301992-50302011 | MS.gene41579:intron | 20.0% |
| !!! | TTTCGAATTTAGATTTTATG+CGG | - | chr3.1:50302121-50302140 | MS.gene41579:intron | 20.0% |
| ! | AAAACATAGAAAGAACCTTT+AGG | + | chr3.1:50302887-50302906 | None:intergenic | 25.0% |
| ! | AAACATAGAAAGAACCTTTA+GGG | + | chr3.1:50302886-50302905 | None:intergenic | 25.0% |
| ! | AAGACCAAAAATGTGAAATT+CGG | + | chr3.1:50301318-50301337 | None:intergenic | 25.0% |
| ! | ACTTTGAGTACTAATCAATA+TGG | - | chr3.1:50302594-50302613 | MS.gene41579:CDS | 25.0% |
| ! | CCAAGAAAATCAATAGATAT+AGG | + | chr3.1:50301789-50301808 | None:intergenic | 25.0% |
| ! | CTAGTGATATTTACAAAATC+AGG | + | chr3.1:50302507-50302526 | None:intergenic | 25.0% |
| ! | TAATTACAACTTACAAGTGT+TGG | + | chr3.1:50301125-50301144 | None:intergenic | 25.0% |
| ! | TACTAATTATAGAGCATGTT+TGG | - | chr3.1:50300979-50300998 | MS.gene41579:intron | 25.0% |
| ! | TATGCTATGAGAATGAATAT+TGG | - | chr3.1:50302477-50302496 | MS.gene41579:CDS | 25.0% |
| ! | TCGTATATGGAATAGAAAAA+TGG | - | chr3.1:50300781-50300800 | MS.gene41579:intron | 25.0% |
| ! | TGCATAATCTTGATGAAAAT+CGG | - | chr3.1:50300939-50300958 | MS.gene41579:intron | 25.0% |
| ! | TTCAATATTATTCCAGTACT+TGG | + | chr3.1:50302741-50302760 | None:intergenic | 25.0% |
| ! | TTTCTCATAAAGTGGTTAAA+GGG | + | chr3.1:50302019-50302038 | None:intergenic | 25.0% |
| !! | TCATTGATTATTGTCGTATA+TGG | - | chr3.1:50300768-50300787 | MS.gene41579:intron | 25.0% |
| !! | TTTTCTCATAAAGTGGTTAA+AGG | + | chr3.1:50302020-50302039 | None:intergenic | 25.0% |
| !! | TTTTTGGACACATTTTTCAT+AGG | + | chr3.1:50302789-50302808 | None:intergenic | 25.0% |
| !!! | AATACTACTTTGAAGTCAAT+AGG | - | chr3.1:50301360-50301379 | MS.gene41579:CDS | 25.0% |
| !!! | CCTATATCTATTGATTTTCT+TGG | - | chr3.1:50301786-50301805 | MS.gene41579:intron | 25.0% |
| !!! | TCGTTGCATATTTTAGTAAT+AGG | - | chr3.1:50303215-50303234 | MS.gene41579:intron | 25.0% |
| !!! | TGCATATTTTAGTAATAGGA+GGG | - | chr3.1:50303219-50303238 | MS.gene41579:intron | 25.0% |
| !!! | TGTACCATAAATGCATTTTT+TGG | - | chr3.1:50302699-50302718 | MS.gene41579:intron | 25.0% |
| !!! | TGTTTTTGTTTGTCCATTTA+TGG | + | chr3.1:50300476-50300495 | None:intergenic | 25.0% |
| !!! | TTGCATATTTTAGTAATAGG+AGG | - | chr3.1:50303218-50303237 | MS.gene41579:intron | 25.0% |
| ACAGATATAATGAACGACAA+AGG | - | chr3.1:50301546-50301565 | MS.gene41579:CDS | 30.0% | |
| AGCTGCGAAAAATAACTAAA+TGG | + | chr3.1:50303340-50303359 | None:intergenic | 30.0% | |
| ATTATAGAGCATGTTTGGAA+AGG | - | chr3.1:50300984-50301003 | MS.gene41579:intron | 30.0% | |
| CGAACCAAAAAATGCATTTA+TGG | + | chr3.1:50302706-50302725 | None:intergenic | 30.0% | |
| CTAAGAGTGATTTCAAAGTA+TGG | - | chr3.1:50301648-50301667 | MS.gene41579:intron | 30.0% | |
| GAACATCTTTAACTAGATTG+AGG | + | chr3.1:50301704-50301723 | None:intergenic | 30.0% | |
| TCTAGTTAAAGATGTTCAGA+AGG | - | chr3.1:50301707-50301726 | MS.gene41579:intron | 30.0% | |
| TCTCAAATTATTAGTGGTGT+CGG | - | chr3.1:50301163-50301182 | MS.gene41579:CDS | 30.0% | |
| TTGAGTACTAATCAATATGG+TGG | - | chr3.1:50302597-50302616 | MS.gene41579:CDS | 30.0% | |
| TTTATGAATCACTTTGTCCA+TGG | - | chr3.1:50303124-50303143 | MS.gene41579:intron | 30.0% | |
| TTTCATCGTAATGTCAATTG+CGG | - | chr3.1:50302044-50302063 | MS.gene41579:intron | 30.0% | |
| ! | CGACTTTTTATACTTCAGAA+TGG | - | chr3.1:50303038-50303057 | MS.gene41579:intron | 30.0% |
| ! | GCTATTTAGAATGTTAGAGT+TGG | - | chr3.1:50302067-50302086 | MS.gene41579:intron | 30.0% |
| !! | ATTTTGGTCTTCGATATGAT+CGG | - | chr3.1:50300903-50300922 | MS.gene41579:CDS | 30.0% |
| AAAACATGAAGTAGGGTTAC+TGG | + | chr3.1:50302307-50302326 | None:intergenic | 35.0% | |
| AAAGATGTTCAGAAGGCTAA+AGG | - | chr3.1:50301714-50301733 | MS.gene41579:intron | 35.0% | |
| AAGATGTTCAGAAGGCTAAA+GGG | - | chr3.1:50301715-50301734 | MS.gene41579:intron | 35.0% | |
| AATGAAGTAATCGCTCATCA+TGG | - | chr3.1:50300499-50300518 | MS.gene41579:CDS | 35.0% | |
| ACAAATGTTTCAGACCATTC+TGG | - | chr3.1:50303505-50303524 | MS.gene41579:CDS | 35.0% | |
| ACCAAAAATGTGAAATTCGG+AGG | + | chr3.1:50301315-50301334 | None:intergenic | 35.0% | |
| ACGATACACTGCTAAACAAA+AGG | - | chr3.1:50301761-50301780 | MS.gene41579:intron | 35.0% | |
| ACTTTCAAGAGATTTCCATG+TGG | + | chr3.1:50301591-50301610 | None:intergenic | 35.0% | |
| ATCTCATAACTAACCCAGTT+TGG | + | chr3.1:50303367-50303386 | None:intergenic | 35.0% | |
| CATGGAAATCTCTTGAAAGT+AGG | - | chr3.1:50301591-50301610 | MS.gene41579:CDS | 35.0% | |
| CTAATCAATATGGTGGCAAA+TGG | - | chr3.1:50302604-50302623 | MS.gene41579:CDS | 35.0% | |
| CTAGACTGTTGGATTAAGAT+CGG | + | chr3.1:50302245-50302264 | None:intergenic | 35.0% | |
| GGGACCAAAAAAAACTAATG+TGG | + | chr3.1:50301999-50302018 | None:intergenic | 35.0% | |
| GTTTAGCAGTGTATCGTTTA+AGG | + | chr3.1:50301758-50301777 | None:intergenic | 35.0% | |
| GTTTCCATTGCTTCCATAAA+TGG | - | chr3.1:50300460-50300479 | MS.gene41579:CDS | 35.0% | |
| TAATGAACGACAAAGGTCTT+CGG | - | chr3.1:50301553-50301572 | MS.gene41579:CDS | 35.0% | |
| TATACCTGATGATAGAACCT+TGG | + | chr3.1:50303178-50303197 | None:intergenic | 35.0% | |
| TATGGTCCAAATGCTTTCTA+TGG | - | chr3.1:50301666-50301685 | MS.gene41579:intron | 35.0% | |
| TCATTGCCTCAATTTGTCTA+TGG | + | chr3.1:50302449-50302468 | None:intergenic | 35.0% | |
| TGGAATCAGATCAATGATCA+TGG | - | chr3.1:50302624-50302643 | MS.gene41579:CDS | 35.0% | |
| TTAACTAGATTGAGGCCAAT+CGG | + | chr3.1:50301696-50301715 | None:intergenic | 35.0% | |
| TTCAGTGACCGAAAAGAATT+CGG | - | chr3.1:50300851-50300870 | MS.gene41579:CDS | 35.0% | |
| TTCATCGTAATGTCAATTGC+GGG | - | chr3.1:50302045-50302064 | MS.gene41579:intron | 35.0% | |
| TTGTCCATTTATGGAAGCAA+TGG | + | chr3.1:50300467-50300486 | None:intergenic | 35.0% | |
| ! | ACCTCCGAATTTCACATTTT+TGG | - | chr3.1:50301311-50301330 | MS.gene41579:CDS | 35.0% |
| ! | AGTTCAAAGTGTTCACCATA+TGG | + | chr3.1:50303400-50303419 | None:intergenic | 35.0% |
| ! | ATGCTTCTTAGGTTAGCTAA+TGG | - | chr3.1:50300670-50300689 | MS.gene41579:intron | 35.0% |
| ! | GCTCTATACCGAATTCTTTT+CGG | + | chr3.1:50300862-50300881 | None:intergenic | 35.0% |
| ! | GTCTTTTTCCAGGATATGTA+TGG | - | chr3.1:50301333-50301352 | MS.gene41579:CDS | 35.0% |
| ! | TTATTCCAGTACTTGGTGAA+AGG | + | chr3.1:50302734-50302753 | None:intergenic | 35.0% |
| ! | TTTACCTTAAAAGCACGAAG+AGG | + | chr3.1:50300730-50300749 | None:intergenic | 35.0% |
| ! | TTTTATGCGGTCAACATAAG+TGG | - | chr3.1:50302134-50302153 | MS.gene41579:intron | 35.0% |
| ! | TTTTTCCAGGATATGTATGG+TGG | - | chr3.1:50301336-50301355 | MS.gene41579:CDS | 35.0% |
| !! | ACATTGTTCTAAAATCGGGA+TGG | - | chr3.1:50300543-50300562 | MS.gene41579:CDS | 35.0% |
| !! | ACTACTTTGAAGTCAATAGG+TGG | - | chr3.1:50301363-50301382 | MS.gene41579:CDS | 35.0% |
| !! | GTCCGACATTGTTCTAAAAT+CGG | - | chr3.1:50300538-50300557 | MS.gene41579:CDS | 35.0% |
| !! | GTTAAGTGATGGATTGGTTA+TGG | + | chr3.1:50303303-50303322 | None:intergenic | 35.0% |
| !! | GTTGGTGATATGGATGATAA+TGG | + | chr3.1:50302858-50302877 | None:intergenic | 35.0% |
| !! | TCCGACATTGTTCTAAAATC+GGG | - | chr3.1:50300539-50300558 | MS.gene41579:CDS | 35.0% |
| !!! | CACATTTTTGGTCTTTTTCC+AGG | - | chr3.1:50301323-50301342 | MS.gene41579:CDS | 35.0% |
| !!! | TCCCGATTTTAGAACAATGT+CGG | + | chr3.1:50300543-50300562 | None:intergenic | 35.0% |
| AAACTTCCTTCAGACCTTTC+TGG | - | chr3.1:50302411-50302430 | MS.gene41579:CDS | 40.0% | |
| AAAGCAATAGTAGGTGCAAG+TGG | - | chr3.1:50303068-50303087 | MS.gene41579:intron | 40.0% | |
| AACAACATGGTAAGCTTCCA+TGG | - | chr3.1:50301436-50301455 | MS.gene41579:intron | 40.0% | |
| AAGTTCCTTTCACCAAGTAC+TGG | - | chr3.1:50302726-50302745 | MS.gene41579:intron | 40.0% | |
| AATTTGTCTATGGACCCCAA+GGG | + | chr3.1:50302439-50302458 | None:intergenic | 40.0% | |
| ACAACATGGTAAGCTTCCAT+GGG | - | chr3.1:50301437-50301456 | MS.gene41579:intron | 40.0% | |
| AGAGAATTCCTTAGAAGCAG+GGG | - | chr3.1:50303433-50303452 | MS.gene41579:CDS | 40.0% | |
| AGCGGTTTCTCTCATATCAA+AGG | + | chr3.1:50300707-50300726 | None:intergenic | 40.0% | |
| AGGAATTCTCTGATATCAGC+AGG | + | chr3.1:50303424-50303443 | None:intergenic | 40.0% | |
| ATCACCAACTATTGCCCTAA+AGG | - | chr3.1:50302869-50302888 | MS.gene41579:intron | 40.0% | |
| ATGGATGTTATCCATGAAGG+GGG | - | chr3.1:50300562-50300581 | MS.gene41579:CDS | 40.0% | |
| CAGAGAATTCCTTAGAAGCA+GGG | - | chr3.1:50303432-50303451 | MS.gene41579:CDS | 40.0% | |
| CATAAAAACCTCTGCTGTTC+CGG | + | chr3.1:50303110-50303129 | None:intergenic | 40.0% | |
| CATTAAACGGCTTCATTCCA+TGG | + | chr3.1:50303144-50303163 | None:intergenic | 40.0% | |
| CTAACTATGAAGCACGGATA+CGG | + | chr3.1:50301224-50301243 | None:intergenic | 40.0% | |
| CTGAGATAATTGCTCGTAGA+GGG | - | chr3.1:50301478-50301497 | MS.gene41579:CDS | 40.0% | |
| GATATGCTTTCTCCCAAGTT+TGG | - | chr3.1:50302537-50302556 | MS.gene41579:CDS | 40.0% | |
| GATGGATGTTATCCATGAAG+GGG | - | chr3.1:50300561-50300580 | MS.gene41579:CDS | 40.0% | |
| GGAGAAGTGAAAGCAATAGT+AGG | - | chr3.1:50303059-50303078 | MS.gene41579:intron | 40.0% | |
| GGAGGGCTAAAATCGTTAAT+CGG | - | chr3.1:50303236-50303255 | MS.gene41579:intron | 40.0% | |
| GGATGGATGTTATCCATGAA+GGG | - | chr3.1:50300560-50300579 | MS.gene41579:CDS | 40.0% | |
| GTTTCGCATCAGTTAAGTGA+TGG | + | chr3.1:50303314-50303333 | None:intergenic | 40.0% | |
| TATGGTACACGTCAAGGAAA+CGG | + | chr3.1:50302688-50302707 | None:intergenic | 40.0% | |
| TATTGCCACCATACATATCC+TGG | + | chr3.1:50301344-50301363 | None:intergenic | 40.0% | |
| TCAGAGAATTCCTTAGAAGC+AGG | - | chr3.1:50303431-50303450 | MS.gene41579:CDS | 40.0% | |
| TGCATTTATGGTACACGTCA+AGG | + | chr3.1:50302694-50302713 | None:intergenic | 40.0% | |
| TTCAAACTCGGGTATATCCA+TGG | - | chr3.1:50301919-50301938 | MS.gene41579:intron | 40.0% | |
| TTCGCAGCTAATACCAAACT+GGG | - | chr3.1:50303351-50303370 | MS.gene41579:CDS | 40.0% | |
| TTTCGCAGCTAATACCAAAC+TGG | - | chr3.1:50303350-50303369 | MS.gene41579:CDS | 40.0% | |
| ! | CAACGGTGTTAGAAAGATTG+TGG | - | chr3.1:50303534-50303553 | MS.gene41579:CDS | 40.0% |
| ! | CTGATTTTTCCATCTGATCG+CGG | + | chr3.1:50301524-50301543 | None:intergenic | 40.0% |
| ! | GGACACATTTTTCATAGGCA+TGG | + | chr3.1:50302784-50302803 | None:intergenic | 40.0% |
| ! | GTATCGTTTAAGGTCTTCCA+CGG | + | chr3.1:50301748-50301767 | None:intergenic | 40.0% |
| ! | GTGGAGCATTTATGCTTCTT+AGG | - | chr3.1:50300659-50300678 | MS.gene41579:intron | 40.0% |
| !! | ACTGGGTTAGTTATGAGATC+TGG | - | chr3.1:50303368-50303387 | MS.gene41579:CDS | 40.0% |
| !! | AGAACCTTTAGGGCAATAGT+TGG | + | chr3.1:50302876-50302895 | None:intergenic | 40.0% |
| !! | GACCATTCTGGAACAAACAA+CGG | - | chr3.1:50303517-50303536 | MS.gene41579:CDS | 40.0% |
| !! | GCATCAGTTAAGTGATGGAT+TGG | + | chr3.1:50303309-50303328 | None:intergenic | 40.0% |
| !! | TAGGGCAATAGTTGGTGATA+TGG | + | chr3.1:50302868-50302887 | None:intergenic | 40.0% |
| AATACCACTTGAACCTGGAC+TGG | + | chr3.1:50300635-50300654 | None:intergenic | 45.0% | |
| AATAGTAGGTGCAAGTGGAG+GGG | - | chr3.1:50303073-50303092 | MS.gene41579:intron | 45.0% | |
| ACATTATTCCGGAACAGCAG+AGG | - | chr3.1:50303099-50303118 | MS.gene41579:intron | 45.0% | |
| AGAACAATGTCGGACATCAG+TGG | + | chr3.1:50300533-50300552 | None:intergenic | 45.0% | |
| AGTCCAGGTTCAAGTGGTAT+TGG | - | chr3.1:50300634-50300653 | MS.gene41579:CDS | 45.0% | |
| CAACTTACCAGCATCGTTAC+AGG | + | chr3.1:50301849-50301868 | None:intergenic | 45.0% | |
| CAATAGTAGGTGCAAGTGGA+GGG | - | chr3.1:50303072-50303091 | MS.gene41579:intron | 45.0% | |
| CAATTTGTCTATGGACCCCA+AGG | + | chr3.1:50302440-50302459 | None:intergenic | 45.0% | |
| CACCGTTGTTTGTTCCAGAA+TGG | + | chr3.1:50303522-50303541 | None:intergenic | 45.0% | |
| CATGTCCTAAAACCCTTTGC+TGG | - | chr3.1:50303457-50303476 | MS.gene41579:CDS | 45.0% | |
| CCAATTGCATGCATTCGCAA+CGG | + | chr3.1:50302271-50302290 | None:intergenic | 45.0% | |
| CGAATGCATGCAATTGGTGA+TGG | - | chr3.1:50302274-50302293 | MS.gene41579:CDS | 45.0% | |
| CTACGAGCAATTATCTCAGC+AGG | + | chr3.1:50301477-50301496 | None:intergenic | 45.0% | |
| CTGTAACGATGCTGGTAAGT+TGG | - | chr3.1:50301847-50301866 | MS.gene41579:intron | 45.0% | |
| CTGTCGCTAACTATGAAGCA+CGG | + | chr3.1:50301230-50301249 | None:intergenic | 45.0% | |
| GAAGCCGTTTAATGCTGTCA+CGG | - | chr3.1:50303150-50303169 | MS.gene41579:intron | 45.0% | |
| GAAGGAAAACCACCCTTTCT+CGG | + | chr3.1:50303571-50303590 | None:intergenic | 45.0% | |
| GAGATCTGGACAACTCCATA+TGG | - | chr3.1:50303382-50303401 | MS.gene41579:CDS | 45.0% | |
| GCTGAGATAATTGCTCGTAG+AGG | - | chr3.1:50301477-50301496 | MS.gene41579:CDS | 45.0% | |
| GGCTAAAGGGATATTAACCG+TGG | - | chr3.1:50301728-50301747 | MS.gene41579:intron | 45.0% | |
| GGGATGGATGTTATCCATGA+AGG | - | chr3.1:50300559-50300578 | MS.gene41579:CDS | 45.0% | |
| GGTCCAAATGCTTTCTATGG+TGG | - | chr3.1:50301669-50301688 | MS.gene41579:intron | 45.0% | |
| GTTAGCTAATGGTGCAGCAA+AGG | - | chr3.1:50300681-50300700 | MS.gene41579:intron | 45.0% | |
| TCCTAAAACCCTTTGCTGGT+GGG | - | chr3.1:50303461-50303480 | MS.gene41579:CDS | 45.0% | |
| TGGAGGGGCAAACATTATTC+CGG | - | chr3.1:50303088-50303107 | MS.gene41579:intron | 45.0% | |
| TGGGGTCCATAGACAAATTG+AGG | - | chr3.1:50302440-50302459 | MS.gene41579:CDS | 45.0% | |
| TGGTCTAGCAATAGCAGTTC+CGG | - | chr3.1:50301383-50301402 | MS.gene41579:CDS | 45.0% | |
| TGTTCAGCAGCTGTAACACA+AGG | + | chr3.1:50302377-50302396 | None:intergenic | 45.0% | |
| ! | AGAAAGGGTGGTTTTCCTTC+AGG | - | chr3.1:50303571-50303590 | MS.gene41579:CDS | 45.0% |
| ! | ATTTTTCCATCTGATCGCGG+AGG | + | chr3.1:50301521-50301540 | None:intergenic | 45.0% |
| ! | CTTAAAAGCACGAAGAGGAG+CGG | + | chr3.1:50300725-50300744 | None:intergenic | 45.0% |
| !! | GATGATAATGGTCTCTTCCC+TGG | + | chr3.1:50302846-50302865 | None:intergenic | 45.0% |
| !! | GGTCCACCATAGAAAGCATT+TGG | + | chr3.1:50301675-50301694 | None:intergenic | 45.0% |
| !! | GTGGCTGCTGCTTTATGTTT+GGG | - | chr3.1:50300604-50300623 | MS.gene41579:CDS | 45.0% |
| !! | TACAAGTGTTGGTGTCGTGT+CGG | + | chr3.1:50301114-50301133 | None:intergenic | 45.0% |
| !! | TGCATGCAATTGGTGATGGT+AGG | - | chr3.1:50302278-50302297 | MS.gene41579:CDS | 45.0% |
| !! | TGGCTGCTGCTTTATGTTTG+GGG | - | chr3.1:50300605-50300624 | MS.gene41579:CDS | 45.0% |
| !! | TGTGGCTGCTGCTTTATGTT+TGG | - | chr3.1:50300603-50300622 | MS.gene41579:CDS | 45.0% |
| !! | TTGGAAAGGTGTTAAGCCAC+TGG | - | chr3.1:50300998-50301017 | MS.gene41579:intron | 45.0% |
| !!! | AGCTGGTGGTGGAACATTTT+TGG | + | chr3.1:50302805-50302824 | None:intergenic | 45.0% |
| !!! | CAGCAAAGGGTTTTAGGACA+TGG | + | chr3.1:50303459-50303478 | None:intergenic | 45.0% |
| ACACAAACACCGGATACGAC+AGG | + | chr3.1:50301201-50301220 | None:intergenic | 50.0% | |
| ACGGATACGGACACAAACAC+CGG | + | chr3.1:50301211-50301230 | None:intergenic | 50.0% | |
| ATCGTCTGATCTCGATCCAG+TGG | + | chr3.1:50302163-50302182 | None:intergenic | 50.0% | |
| ATCGTTACAGGTCCACCTGA+AGG | + | chr3.1:50301837-50301856 | None:intergenic | 50.0% | |
| CAAATTGCCCCACCAGCAAA+GGG | + | chr3.1:50303472-50303491 | None:intergenic | 50.0% | |
| CACAAACACCGGATACGACA+GGG | + | chr3.1:50301200-50301219 | None:intergenic | 50.0% | |
| CACATGGCGTGGAAACAACA+TGG | - | chr3.1:50301423-50301442 | MS.gene41579:intron | 50.0% | |
| CCACCAATACCACTTGAACC+TGG | + | chr3.1:50300640-50300659 | None:intergenic | 50.0% | |
| CCGTTGCGAATGCATGCAAT+TGG | - | chr3.1:50302268-50302287 | MS.gene41579:CDS | 50.0% | |
| CCTAAAACCCTTTGCTGGTG+GGG | - | chr3.1:50303462-50303481 | MS.gene41579:CDS | 50.0% | |
| CGCAATGCTCGACCAAACTT+GGG | + | chr3.1:50302552-50302571 | None:intergenic | 50.0% | |
| CTAAGTATGCCTCCTCCTTC+AGG | - | chr3.1:50301819-50301838 | MS.gene41579:intron | 50.0% | |
| GCAATAGTAGGTGCAAGTGG+AGG | - | chr3.1:50303071-50303090 | MS.gene41579:intron | 50.0% | |
| GCAGTCAGTGATCCGAGAAA+GGG | - | chr3.1:50303556-50303575 | MS.gene41579:CDS | 50.0% | |
| GGAGCCGTGACAGCATTAAA+CGG | + | chr3.1:50303157-50303176 | None:intergenic | 50.0% | |
| GGCTCCAAGGTTCTATCATC+AGG | - | chr3.1:50303171-50303190 | MS.gene41579:intron | 50.0% | |
| GGTCTAGCAATAGCAGTTCC+GGG | - | chr3.1:50301384-50301403 | MS.gene41579:CDS | 50.0% | |
| GTCCTAAAACCCTTTGCTGG+TGG | - | chr3.1:50303460-50303479 | MS.gene41579:CDS | 50.0% | |
| GTCGACGTTAACATGACCAG+TGG | + | chr3.1:50301017-50301036 | None:intergenic | 50.0% | |
| TCAACATAAGTGGACGCCAC+TGG | - | chr3.1:50302144-50302163 | MS.gene41579:intron | 50.0% | |
| TCGCAATGCTCGACCAAACT+TGG | + | chr3.1:50302553-50302572 | None:intergenic | 50.0% | |
| TTAATGCTGTCACGGCTCCA+AGG | - | chr3.1:50303158-50303177 | MS.gene41579:intron | 50.0% | |
| ! | CCAGGTTCAAGTGGTATTGG+TGG | - | chr3.1:50300637-50300656 | MS.gene41579:CDS | 50.0% |
| ! | CGCTCCTCTTCGTGCTTTTA+AGG | - | chr3.1:50300723-50300742 | MS.gene41579:intron | 50.0% |
| ! | CTGAAGGAGGAGGCATACTT+AGG | + | chr3.1:50301821-50301840 | None:intergenic | 50.0% |
| ! | GTTGTTTCCACGCCATGTGA+AGG | + | chr3.1:50301422-50301441 | None:intergenic | 50.0% |
| ! | TTTGGTCGAGCATTGCGAAG+AGG | - | chr3.1:50302555-50302574 | MS.gene41579:CDS | 50.0% |
| !! | AGAACTTGCTGGCCTTCACA+TGG | - | chr3.1:50301407-50301426 | MS.gene41579:intron | 50.0% |
| !! | GAGGAGTGTCTGTGCTTCAT+AGG | + | chr3.1:50301048-50301067 | None:intergenic | 50.0% |
| !! | GCTTTCTATGGTGGACCGAT+TGG | - | chr3.1:50301678-50301697 | MS.gene41579:intron | 50.0% |
| !! | GGCTGCTGCTTTATGTTTGG+GGG | - | chr3.1:50300606-50300625 | MS.gene41579:CDS | 50.0% |
| !! | GGTTCAAGTGGTATTGGTGG+TGG | - | chr3.1:50300640-50300659 | MS.gene41579:CDS | 50.0% |
| ACAAAGTTGGCAGGAGCTGG+TGG | + | chr3.1:50302819-50302838 | None:intergenic | 55.0% | |
| ACACGACACGTGTCTGACAC+CGG | + | chr3.1:50301085-50301104 | None:intergenic | 55.0% | |
| AGGTGGACCTGTAACGATGC+TGG | - | chr3.1:50301839-50301858 | MS.gene41579:intron | 55.0% | |
| AGTATGCCTCCTCCTTCAGG+TGG | - | chr3.1:50301822-50301841 | MS.gene41579:intron | 55.0% | |
| CCACAACTGCATCCACTGCA+TGG | + | chr3.1:50300588-50300607 | None:intergenic | 55.0% | |
| CCATGCAGTGGATGCAGTTG+TGG | - | chr3.1:50300585-50300604 | MS.gene41579:CDS | 55.0% | |
| CGCAACGGTGACTAGACTGT+TGG | + | chr3.1:50302256-50302275 | None:intergenic | 55.0% | |
| CGGAGTGTGTTTGCACCACA+TGG | - | chr3.1:50301573-50301592 | MS.gene41579:CDS | 55.0% | |
| GCAAATTGCCCCACCAGCAA+AGG | + | chr3.1:50303473-50303492 | None:intergenic | 55.0% | |
| GGCAGTCAGTGATCCGAGAA+AGG | - | chr3.1:50303555-50303574 | MS.gene41579:CDS | 55.0% | |
| GGCTTTACAAGTCTCGCCCA+TGG | + | chr3.1:50301456-50301475 | None:intergenic | 55.0% | |
| GTCAGTGATCCGAGAAAGGG+TGG | - | chr3.1:50303559-50303578 | MS.gene41579:CDS | 55.0% | |
| GTCAGTGTCCCTGTCGTATC+CGG | - | chr3.1:50301189-50301208 | MS.gene41579:CDS | 55.0% | |
| GTTACAGGTCCACCTGAAGG+AGG | + | chr3.1:50301834-50301853 | None:intergenic | 55.0% | |
| GTTGCCAGTCCAGGTTCAAG+TGG | - | chr3.1:50300628-50300647 | MS.gene41579:CDS | 55.0% | |
| TGAAGGCCAGCAAGTTCTCC+CGG | + | chr3.1:50301405-50301424 | None:intergenic | 55.0% | |
| ! | CCCCACCAGCAAAGGGTTTT+AGG | + | chr3.1:50303465-50303484 | None:intergenic | 55.0% |
| !! | TCCTCGCGTTAGGAGTGTTC+CGG | - | chr3.1:50301063-50301082 | MS.gene41579:intron | 55.0% |
| !! | TGTTGGTGTCGTGTCGGTGT+CGG | + | chr3.1:50301108-50301127 | None:intergenic | 55.0% |
| AAGTTGGCAGGAGCTGGTGG+TGG | + | chr3.1:50302816-50302835 | None:intergenic | 60.0% | |
| ACAGGTCCACCTGAAGGAGG+AGG | + | chr3.1:50301831-50301850 | None:intergenic | 60.0% | |
| ACCGGAACACTCCTAACGCG+AGG | + | chr3.1:50301067-50301086 | None:intergenic | 60.0% | |
| CTGCCAACTTTGTCGCGCCA+GGG | - | chr3.1:50302826-50302845 | MS.gene41579:intron | 60.0% | |
| CTTCCCTGGCGCGACAAAGT+TGG | + | chr3.1:50302832-50302851 | None:intergenic | 60.0% | |
| GAAGCTCCTCCGCGATCAGA+TGG | - | chr3.1:50301512-50301531 | MS.gene41579:CDS | 60.0% | |
| GCACAGACACTCCTCGCGTT+AGG | - | chr3.1:50301053-50301072 | MS.gene41579:intron | 60.0% | |
| GCAGTTCCGGGAGAACTTGC+TGG | - | chr3.1:50301396-50301415 | MS.gene41579:CDS | 60.0% | |
| GCGACAAAGTTGGCAGGAGC+TGG | + | chr3.1:50302822-50302841 | None:intergenic | 60.0% | |
| GGACATGGCCCCTGCTTCTA+AGG | + | chr3.1:50303444-50303463 | None:intergenic | 60.0% | |
| TGTTTGGGGGTTGCCAGTCC+AGG | - | chr3.1:50300619-50300638 | MS.gene41579:CDS | 60.0% | |
| ! | AGACCTTTCTGGCGCCCTTG+GGG | - | chr3.1:50302422-50302441 | MS.gene41579:CDS | 60.0% |
| ! | AGGGCGCCAGAAAGGTCTGA+AGG | + | chr3.1:50302420-50302439 | None:intergenic | 60.0% |
| ! | CAGACCTTTCTGGCGCCCTT+GGG | - | chr3.1:50302421-50302440 | MS.gene41579:CDS | 60.0% |
| ! | TCAGACCTTTCTGGCGCCCT+TGG | - | chr3.1:50302420-50302439 | MS.gene41579:CDS | 60.0% |
| !! | TTGCTGGCCTTCACATGGCG+TGG | - | chr3.1:50301412-50301431 | MS.gene41579:intron | 60.0% |
| CCACTGCATGGCCCCCTTCA+TGG | + | chr3.1:50300576-50300595 | None:intergenic | 65.0% | |
| CCATGAAGGGGGCCATGCAG+TGG | - | chr3.1:50300573-50300592 | MS.gene41579:CDS | 65.0% | |
| CCTGCCAACTTTGTCGCGCC+AGG | - | chr3.1:50302825-50302844 | MS.gene41579:intron | 65.0% | |
| CCTGGCGCGACAAAGTTGGC+AGG | + | chr3.1:50302828-50302847 | None:intergenic | 65.0% | |
| !! | GGACCCCAAGGGCGCCAGAA+AGG | + | chr3.1:50302428-50302447 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 50300427 | 50303600 | 50300427 | ID=MS.gene41579 |
| chr3.1 | mRNA | 50300427 | 50303600 | 50300427 | ID=MS.gene41579.t1;Parent=MS.gene41579 |
| chr3.1 | exon | 50303283 | 50303600 | 50303283 | ID=MS.gene41579.t1.exon1;Parent=MS.gene41579.t1 |
| chr3.1 | CDS | 50303283 | 50303600 | 50303283 | ID=cds.MS.gene41579.t1;Parent=MS.gene41579.t1 |
| chr3.1 | exon | 50302167 | 50302682 | 50302167 | ID=MS.gene41579.t1.exon2;Parent=MS.gene41579.t1 |
| chr3.1 | CDS | 50302167 | 50302682 | 50302167 | ID=cds.MS.gene41579.t1;Parent=MS.gene41579.t1 |
| chr3.1 | exon | 50301474 | 50301640 | 50301474 | ID=MS.gene41579.t1.exon3;Parent=MS.gene41579.t1 |
| chr3.1 | CDS | 50301474 | 50301640 | 50301474 | ID=cds.MS.gene41579.t1;Parent=MS.gene41579.t1 |
| chr3.1 | exon | 50301137 | 50301425 | 50301137 | ID=MS.gene41579.t1.exon4;Parent=MS.gene41579.t1 |
| chr3.1 | CDS | 50301137 | 50301425 | 50301137 | ID=cds.MS.gene41579.t1;Parent=MS.gene41579.t1 |
| chr3.1 | exon | 50300835 | 50300939 | 50300835 | ID=MS.gene41579.t1.exon5;Parent=MS.gene41579.t1 |
| chr3.1 | CDS | 50300835 | 50300939 | 50300835 | ID=cds.MS.gene41579.t1;Parent=MS.gene41579.t1 |
| chr3.1 | exon | 50300427 | 50300669 | 50300427 | ID=MS.gene41579.t1.exon6;Parent=MS.gene41579.t1 |
| chr3.1 | CDS | 50300427 | 50300669 | 50300427 | ID=cds.MS.gene41579.t1;Parent=MS.gene41579.t1 |
| Gene Sequence |
| Protein sequence |
