Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045074.t1 | XP_003602023.3 | 97.1 | 587 | 17 | 0 | 1 | 587 | 1 | 587 | 0.00E+00 | 1125.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045074.t1 | Q680I5 | 63.6 | 583 | 201 | 5 | 7 | 586 | 3 | 577 | 4.3e-205 | 715.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045074.t1 | A0A396IUP0 | 97.1 | 587 | 17 | 0 | 1 | 587 | 1 | 587 | 0.0e+00 | 1125.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene016742 | MS.gene045074 | PPI |
| MS.gene008569 | MS.gene045074 | PPI |
| MS.gene045074 | MS.gene070503 | PPI |
| MS.gene070510 | MS.gene045074 | PPI |
| MS.gene045074 | MS.gene016758 | PPI |
| MS.gene37911 | MS.gene045074 | PPI |
| MS.gene064527 | MS.gene045074 | PPI |
| MS.gene75036 | MS.gene045074 | PPI |
| MS.gene070509 | MS.gene045074 | PPI |
| MS.gene045074 | MS.gene070511 | PPI |
| MS.gene045074 | MS.gene070507 | PPI |
| MS.gene045074 | MS.gene057884 | PPI |
| MS.gene045074 | MS.gene057883 | PPI |
| MS.gene81620 | MS.gene045074 | PPI |
| MS.gene045074 | MS.gene070492 | PPI |
| MS.gene070505 | MS.gene045074 | PPI |
| MS.gene049472 | MS.gene045074 | PPI |
| MS.gene38520 | MS.gene045074 | PPI |
| MS.gene057886 | MS.gene045074 | PPI |
| MS.gene81615 | MS.gene045074 | PPI |
| MS.gene045074 | MS.gene38520 | PPI |
| MS.gene66373 | MS.gene045074 | PPI |
| MS.gene045074 | MS.gene41579 | PPI |
| MS.gene045074 | MS.gene030326 | PPI |
| MS.gene045074 | MS.gene67840 | PPI |
| MS.gene013833 | MS.gene045074 | PPI |
| MS.gene81622 | MS.gene045074 | PPI |
| MS.gene045074 | MS.gene81617 | PPI |
| MS.gene75436 | MS.gene045074 | PPI |
| MS.gene016743 | MS.gene045074 | PPI |
| MS.gene013831 | MS.gene045074 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045074.t1 | MTR_3g087950 | 97.237 | 579 | 16 | 0 | 9 | 587 | 4 | 582 | 0.0 | 1160 |
| MS.gene045074.t1 | MTR_3g466000 | 74.866 | 561 | 140 | 1 | 27 | 587 | 18 | 577 | 0.0 | 854 |
| MS.gene045074.t1 | MTR_6g090280 | 52.205 | 567 | 258 | 4 | 33 | 587 | 58 | 623 | 0.0 | 551 |
| MS.gene045074.t1 | MTR_6g090280 | 51.050 | 476 | 221 | 3 | 123 | 587 | 1 | 475 | 1.17e-167 | 485 |
| MS.gene045074.t1 | MTR_6g090280 | 54.756 | 431 | 192 | 3 | 33 | 461 | 58 | 487 | 2.06e-151 | 445 |
| MS.gene045074.t1 | MTR_5g084180 | 86.792 | 106 | 14 | 0 | 16 | 121 | 17 | 122 | 1.21e-39 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045074.t1 | AT4G39640 | 63.731 | 579 | 200 | 5 | 10 | 586 | 1 | 571 | 0.0 | 746 |
| MS.gene045074.t1 | AT4G39640 | 63.731 | 579 | 200 | 5 | 10 | 586 | 1 | 571 | 0.0 | 746 |
| MS.gene045074.t1 | AT4G39650 | 63.699 | 584 | 199 | 6 | 7 | 586 | 3 | 577 | 0.0 | 728 |
| MS.gene045074.t1 | AT4G29210 | 49.298 | 570 | 267 | 6 | 37 | 587 | 71 | 637 | 0.0 | 558 |
| MS.gene045074.t1 | AT4G29210 | 51.402 | 428 | 204 | 4 | 37 | 461 | 71 | 497 | 1.33e-155 | 456 |
| MS.gene045074.t1 | AT1G69820 | 71.111 | 225 | 64 | 1 | 291 | 514 | 1 | 225 | 4.28e-114 | 339 |
Find 152 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGCTTCCTTCAGGCCTTTC+TGG | 0.074565 | 3.2:-74986472 | MS.gene045074:CDS |
| TCCTACACCTTTATTTATTT+TGG | 0.084530 | 3.2:+74984926 | None:intergenic |
| TTGAACTTTCTGCTAATATC+AGG | 0.251199 | 3.2:-74985037 | MS.gene045074:CDS |
| TGTGGCTGCTGCTCTTTGTT+TGG | 0.260299 | 3.2:-74987951 | MS.gene045074:CDS |
| CATGTCCTTCAGAGCCTTGC+TGG | 0.265745 | 3.2:-74984993 | MS.gene045074:CDS |
| GCAGGAAAACCACCCTTTCT+TGG | 0.267405 | 3.2:+74984882 | None:intergenic |
| GCGGTGCCTTTATGCTTCTT+AGG | 0.281278 | 3.2:-74987895 | MS.gene045074:CDS |
| TCAGTTATATTTACAAAATC+AGG | 0.292693 | 3.2:+74986379 | None:intergenic |
| CCTCCTCTTTGTTTCCAGTT+TGG | 0.297674 | 3.2:-74988119 | MS.gene045074:CDS |
| TGGCTGCAGTTATGTTATTA+TGG | 0.301381 | 3.2:-74988156 | MS.gene045074:intron |
| TCAAAGCCTCGATTTCTCTA+TGG | 0.303562 | 3.2:+74986437 | None:intergenic |
| CTTGGTATGCCTCCTCCTTC+AGG | 0.309472 | 3.2:-74986833 | MS.gene045074:CDS |
| CTAAGAGCAATTGCAAAGTT+TGG | 0.312938 | 3.2:-74987004 | MS.gene045074:CDS |
| GTGGCTGCTGCTCTTTGTTT+GGG | 0.314878 | 3.2:-74987950 | MS.gene045074:CDS |
| ACTTATGATTCAAGTCATTA+TGG | 0.319436 | 3.2:-74986289 | MS.gene045074:CDS |
| GGACATGGCCCTTACTTCTA+AGG | 0.324451 | 3.2:+74985009 | None:intergenic |
| TCAGGCCTTTCTGGTTCCCT+TGG | 0.331021 | 3.2:-74986463 | MS.gene045074:CDS |
| CTTCCCCGGCACGACGAAAT+TGG | 0.336481 | 3.2:+74985955 | None:intergenic |
| GGAGCAGTTACAGAAGAAAA+AGG | 0.352470 | 3.2:+74985699 | None:intergenic |
| GATCGTCGATGCTCGAAGAT+TGG | 0.359812 | 3.2:-74988016 | MS.gene045074:CDS |
| TTTCAGTTAGAATGAATCTT+GGG | 0.364796 | 3.2:-74986405 | MS.gene045074:CDS |
| GGCCTCTCGGTAGCAGTTCC+AGG | 0.369742 | 3.2:-74987268 | MS.gene045074:CDS |
| CAGGCCTTTCTGGTTCCCTT+GGG | 0.372651 | 3.2:-74986462 | MS.gene045074:CDS |
| ACTACAGTAAATTCGTATTT+CGG | 0.375583 | 3.2:-74986085 | MS.gene045074:CDS |
| CCAAGAAAATCTATAGATAT+AGG | 0.377085 | 3.2:+74986866 | None:intergenic |
| TTTCTTCTGTAACTGCTCCT+AGG | 0.377805 | 3.2:-74985695 | MS.gene045074:CDS |
| ATCGTCGATGCTCGAAGATT+GGG | 0.379068 | 3.2:-74988015 | MS.gene045074:CDS |
| GAACATTCCAAAATAAATAA+AGG | 0.380999 | 3.2:-74984933 | MS.gene045074:CDS |
| CCTGCCAATTTCGTCGTGCC+GGG | 0.393581 | 3.2:-74985959 | MS.gene045074:CDS |
| AGGGAAGTGAAAGCAGTAAT+AGG | 0.397679 | 3.2:-74985795 | MS.gene045074:CDS |
| GTTAAAGATGTTCAGAAGGC+TGG | 0.400636 | 3.2:-74986941 | MS.gene045074:CDS |
| TCCTGCCAATTTCGTCGTGC+CGG | 0.409726 | 3.2:-74985960 | MS.gene045074:CDS |
| ATGTGGTATATTATGAGAAC+TGG | 0.410439 | 3.2:-74985082 | MS.gene045074:CDS |
| GCACAATATGAGCTTCCTTC+AGG | 0.410702 | 3.2:-74986481 | MS.gene045074:CDS |
| GGCAGAAGCAGATGCCAAAC+TGG | 0.410790 | 3.2:+74988105 | None:intergenic |
| TACAATTGCAGACCTATTGA+TGG | 0.415731 | 3.2:+74988770 | None:intergenic |
| TCTCTCTCTTCTCCATCAAT+AGG | 0.420953 | 3.2:-74988782 | MS.gene045074:intron |
| AGTTCAGCTTCAAGTGGTAT+TGG | 0.425763 | 3.2:-74987920 | MS.gene045074:CDS |
| TTCTTCTGTAACTGCTCCTA+GGG | 0.425863 | 3.2:-74985694 | MS.gene045074:CDS |
| GCTTTGTATGGTGGAATAGT+TGG | 0.425952 | 3.2:-74986974 | MS.gene045074:CDS |
| ATGCTTCTTAGGTTAGCTAA+TGG | 0.427061 | 3.2:-74987884 | MS.gene045074:CDS |
| ACCCTTTCTTGGATCACTTA+CGG | 0.430481 | 3.2:+74984893 | None:intergenic |
| AGCTAACCTAAGAAGCATAA+AGG | 0.439391 | 3.2:+74987889 | None:intergenic |
| TTTCTTGGATTAAAGATCCT+TGG | 0.439838 | 3.2:-74986851 | MS.gene045074:CDS |
| CAGGGAAAGCCTTAGAAGTA+AGG | 0.450851 | 3.2:-74985018 | MS.gene045074:CDS |
| TTTGGTCCACAAGCTTTGTA+TGG | 0.452119 | 3.2:-74986986 | MS.gene045074:CDS |
| TTCTCATAATATACCACATT+AGG | 0.453122 | 3.2:+74985086 | None:intergenic |
| GAATCACTTTGTCAAAGGAA+TGG | 0.453749 | 3.2:-74985724 | MS.gene045074:CDS |
| AGCAGGCGGTCGAACATCCT+TGG | 0.454513 | 3.2:+74985982 | None:intergenic |
| TTTCAACACTTGAGCAAACT+TGG | 0.459644 | 3.2:+74986333 | None:intergenic |
| TGAAGGCCAGCTAGTTCTCC+TGG | 0.462220 | 3.2:+74987250 | None:intergenic |
| TTGAGTACTATTCCTGTACT+TGG | 0.467003 | 3.2:+74986046 | None:intergenic |
| TGCTCCTAGGGTCTATCATC+AGG | 0.468787 | 3.2:-74985682 | MS.gene045074:intron |
| AAAGTACACTGTTAAACAAA+AGG | 0.472586 | 3.2:-74986891 | MS.gene045074:CDS |
| ACGACGAAATTGGCAGGAGC+AGG | 0.472614 | 3.2:+74985965 | None:intergenic |
| AACACTACTTTGAAGGCAAA+TGG | 0.481370 | 3.2:-74987292 | MS.gene045074:CDS |
| TCCTTCAGAGCCTTGCTGGT+GGG | 0.483076 | 3.2:-74984989 | MS.gene045074:CDS |
| TAACTTACCAGCATCATTTG+AGG | 0.485318 | 3.2:+74986806 | None:intergenic |
| TGGTGGCAACACTACTTTGA+AGG | 0.485618 | 3.2:-74987299 | MS.gene045074:CDS |
| AACAACATGGGAAGCTTCCA+TGG | 0.490064 | 3.2:-74987216 | MS.gene045074:CDS |
| CGAATTTACTGTAGTGGTCA+TGG | 0.494343 | 3.2:+74986093 | None:intergenic |
| CAGTGATTCTTGCTAGTAGA+GGG | 0.498771 | 3.2:-74987174 | MS.gene045074:CDS |
| GAGAACTGGACAACAGTGAC+CGG | 0.499140 | 3.2:-74985068 | MS.gene045074:CDS |
| CGATTTCTCTATGGATCCCA+AGG | 0.500870 | 3.2:+74986446 | None:intergenic |
| TCCATCTGCATGTGAAGGTA+TGG | 0.508355 | 3.2:+74987139 | None:intergenic |
| CCCGGCACGACGAAATTGGC+AGG | 0.508773 | 3.2:+74985959 | None:intergenic |
| GAAGTAATCATTGCTCATCA+TGG | 0.511179 | 3.2:-74988055 | MS.gene045074:CDS |
| TAGCTGGCCTTCACAAGGCA+TGG | 0.517657 | 3.2:-74987240 | MS.gene045074:CDS |
| GATGATAATGGTCTCTTCCC+CGG | 0.518164 | 3.2:+74985941 | None:intergenic |
| CTTCGAGCATCGACGATCAT+CGG | 0.519186 | 3.2:+74988021 | None:intergenic |
| TCCCACCAGCAAGGCTCTGA+AGG | 0.522177 | 3.2:+74984988 | None:intergenic |
| GTCACCAACTATTGTTCTCA+AGG | 0.525838 | 3.2:-74985915 | MS.gene045074:intron |
| ACATGCAGTGGATGCAGCTG+TGG | 0.526599 | 3.2:-74987969 | MS.gene045074:CDS |
| GGCCGTAAGTGATCCAAGAA+AGG | 0.530949 | 3.2:-74984895 | MS.gene045074:CDS |
| GTCCTTCAGAGCCTTGCTGG+TGG | 0.531940 | 3.2:-74984990 | MS.gene045074:CDS |
| TTTAGTTAAAGATGTTCAGA+AGG | 0.532577 | 3.2:-74986945 | MS.gene045074:CDS |
| GTTGGTGACATGGATGATAA+TGG | 0.536093 | 3.2:+74985929 | None:intergenic |
| ATATGTTATAATAAGAAACT+AGG | 0.536973 | 3.2:-74987034 | MS.gene045074:CDS |
| GGGATGGATGTTATCCAAGA+AGG | 0.538671 | 3.2:-74987995 | MS.gene045074:CDS |
| TGAACTTTCTGCTAATATCA+GGG | 0.539929 | 3.2:-74985036 | MS.gene045074:CDS |
| TCAGCTTCAAGTGGTATTGG+TGG | 0.540011 | 3.2:-74987917 | MS.gene045074:CDS |
| GCTTCAAGTGGTATTGGTGG+CGG | 0.540106 | 3.2:-74987914 | MS.gene045074:CDS |
| GGTATGCCTCCTCCTTCAGG+TGG | 0.549489 | 3.2:-74986830 | MS.gene045074:CDS |
| AGGTGGGCCTCAAATGATGC+TGG | 0.553365 | 3.2:-74986813 | MS.gene045074:intron |
| GGCATTACAAGTCTATTCCA+TGG | 0.553522 | 3.2:+74987199 | None:intergenic |
| GATTATTGCTGCAACTTCAG+AGG | 0.553592 | 3.2:-74985754 | MS.gene045074:CDS |
| TGCTCCTCTTCATGCTTCCA+AGG | 0.556551 | 3.2:-74987831 | MS.gene045074:intron |
| TGAGGCCCACCTGAAGGAGG+AGG | 0.557428 | 3.2:+74986824 | None:intergenic |
| GAAGGCAAATGGTGGCCTCT+CGG | 0.562410 | 3.2:-74987281 | MS.gene045074:CDS |
| GGCTGGAGGGATATTGACAT+TGG | 0.564181 | 3.2:-74986924 | MS.gene045074:CDS |
| ATCATTTGAGGCCCACCTGA+AGG | 0.564377 | 3.2:+74986818 | None:intergenic |
| AGGGAAAGCCTTAGAAGTAA+GGG | 0.565321 | 3.2:-74985017 | MS.gene045074:CDS |
| GCCGTAAGTGATCCAAGAAA+GGG | 0.566039 | 3.2:-74984894 | MS.gene045074:CDS |
| ACAATACTTTCACCAAGTAC+AGG | 0.566632 | 3.2:-74986058 | MS.gene045074:CDS |
| CAGCAAGGCTCTGAAGGACA+TGG | 0.566832 | 3.2:+74984994 | None:intergenic |
| GCAGTTCCAGGAGAACTAGC+TGG | 0.567970 | 3.2:-74987256 | MS.gene045074:CDS |
| GTTGTTCCCATGCCTTGTGA+AGG | 0.569302 | 3.2:+74987233 | None:intergenic |
| GGTCCACAAGCTTTGTATGG+TGG | 0.569960 | 3.2:-74986983 | MS.gene045074:CDS |
| AGAACCTTGAGAACAATAGT+TGG | 0.571389 | 3.2:+74985911 | None:intergenic |
| TGGAATCAGATAAATGATCA+TGG | 0.571447 | 3.2:-74986160 | MS.gene045074:CDS |
| AATAGTACTCAACAATGAGA+TGG | 0.573475 | 3.2:-74986035 | MS.gene045074:CDS |
| GGATCCCAAGGGAACCAGAA+AGG | 0.575413 | 3.2:+74986458 | None:intergenic |
| GGATGGATGTTATCCAAGAA+GGG | 0.577595 | 3.2:-74987994 | MS.gene045074:CDS |
| CACAAGGCATGGGAACAACA+TGG | 0.579526 | 3.2:-74987229 | MS.gene045074:CDS |
| TCAGTGATTCTTGCTAGTAG+AGG | 0.579772 | 3.2:-74987175 | MS.gene045074:CDS |
| AAAGCAGTAATAGGTGCAAG+TGG | 0.581606 | 3.2:-74985786 | MS.gene045074:CDS |
| GTATGCCTCCTCCTTCAGGT+GGG | 0.584516 | 3.2:-74986829 | MS.gene045074:CDS |
| ACCATACCTTCACATGCAGA+TGG | 0.585318 | 3.2:-74987140 | MS.gene045074:CDS |
| CATGGAAAACTCTTGAAAGC+AGG | 0.586551 | 3.2:-74987061 | MS.gene045074:CDS |
| AGAACTGGACAACAGTGACC+GGG | 0.586985 | 3.2:-74985067 | MS.gene045074:CDS |
| AGAAAGTTCAAAGTGGTCCC+CGG | 0.588081 | 3.2:+74985049 | None:intergenic |
| AGCAGTTTCTCTCATATCAA+AGG | 0.589334 | 3.2:+74987850 | None:intergenic |
| AGCTGGCCTTCACAAGGCAT+GGG | 0.593280 | 3.2:-74987239 | MS.gene045074:CDS |
| ACGAAATTGGCAGGAGCAGG+CGG | 0.593667 | 3.2:+74985968 | None:intergenic |
| TCAAATATATCGAATGACAT+TGG | 0.595472 | 3.2:-74987106 | MS.gene045074:CDS |
| ATTCCACCATACAAAGCTTG+TGG | 0.596836 | 3.2:+74986980 | None:intergenic |
| GACATATTGTCCCACCAGCA+AGG | 0.600088 | 3.2:+74984979 | None:intergenic |
| CTGCCAATTTCGTCGTGCCG+GGG | 0.602376 | 3.2:-74985958 | MS.gene045074:CDS |
| TTCAGTTAGAATGAATCTTG+GGG | 0.603643 | 3.2:-74986404 | MS.gene045074:CDS |
| AACAAAGAGGAGGCATGCGA+TGG | 0.603767 | 3.2:+74988129 | None:intergenic |
| AAAGATGTTCAGAAGGCTGG+AGG | 0.604111 | 3.2:-74986938 | MS.gene045074:CDS |
| GTTAGCTAATGGTGTAGCAA+AGG | 0.604530 | 3.2:-74987873 | MS.gene045074:CDS |
| TCCAAAATAAATAAAGGTGT+AGG | 0.605868 | 3.2:-74984927 | MS.gene045074:CDS |
| AGTAGTGTATTTGCACCACA+TGG | 0.606382 | 3.2:-74987079 | MS.gene045074:CDS |
| AGGGAACCAGAAAGGCCTGA+AGG | 0.606461 | 3.2:+74986466 | None:intergenic |
| CATACCTGATGATAGACCCT+AGG | 0.617223 | 3.2:+74985678 | None:intergenic |
| GAAATACGAATTTACTGTAG+TGG | 0.620251 | 3.2:+74986087 | None:intergenic |
| TATGATTCAAGTCATTATGG+TGG | 0.621095 | 3.2:-74986286 | MS.gene045074:CDS |
| ATTTGAGGCCCACCTGAAGG+AGG | 0.625374 | 3.2:+74986821 | None:intergenic |
| ACAAGGCATGGGAACAACAT+GGG | 0.627987 | 3.2:-74987228 | MS.gene045074:CDS |
| AGAACTAGCTGGCCTTCACA+AGG | 0.628697 | 3.2:-74987245 | MS.gene045074:CDS |
| CTACTAGCAAGAATCACTGA+TGG | 0.635765 | 3.2:+74987178 | None:intergenic |
| TAAAGGTGTAGGAAAGCTTG+TGG | 0.635981 | 3.2:-74984916 | MS.gene045074:CDS |
| GTTGTCAGTTCAGCTTCAAG+TGG | 0.641203 | 3.2:-74987926 | MS.gene045074:CDS |
| CTGAAGGAGGAGGCATACCA+AGG | 0.655629 | 3.2:+74986834 | None:intergenic |
| AGTACCTTGGAAGCATGAAG+AGG | 0.656955 | 3.2:+74987827 | None:intergenic |
| AAGATGTTCAGAAGGCTGGA+GGG | 0.658153 | 3.2:-74986937 | MS.gene045074:CDS |
| ATGCCAAACTGGAAACAAAG+AGG | 0.660398 | 3.2:+74988116 | None:intergenic |
| TGGGATCCATAGAGAAATCG+AGG | 0.663794 | 3.2:-74986443 | MS.gene045074:CDS |
| TCGATGCTCGAAGATTGGGA+TGG | 0.670453 | 3.2:-74988011 | MS.gene045074:CDS |
| ACTACTTTGAAGGCAAATGG+TGG | 0.671606 | 3.2:-74987289 | MS.gene045074:CDS |
| GATGGATGTTATCCAAGAAG+GGG | 0.675440 | 3.2:-74987993 | MS.gene045074:CDS |
| CCAAACTGGAAACAAAGAGG+AGG | 0.676783 | 3.2:+74988119 | None:intergenic |
| TATGCAGCTGATACCTAATG+TGG | 0.679757 | 3.2:-74985099 | MS.gene045074:intron |
| GAGAACAATAGTTGGTGACA+TGG | 0.682147 | 3.2:+74985919 | None:intergenic |
| TATTAGCAGAAAGTTCAAAG+TGG | 0.683177 | 3.2:+74985042 | None:intergenic |
| GTAAGTGATCCAAGAAAGGG+TGG | 0.686908 | 3.2:-74984891 | MS.gene045074:CDS |
| GCAGTAATAGGTGCAAGTGG+AGG | 0.701044 | 3.2:-74985783 | MS.gene045074:CDS |
| CTCCTGGAACTGCTACCGAG+AGG | 0.707943 | 3.2:+74987266 | None:intergenic |
| ATGGATGTTATCCAAGAAGG+GGG | 0.708511 | 3.2:-74987992 | MS.gene045074:CDS |
| GATTTCTCTATGGATCCCAA+GGG | 0.710706 | 3.2:+74986447 | None:intergenic |
| GAACTGGACAACAGTGACCG+GGG | 0.715377 | 3.2:-74985066 | MS.gene045074:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATATAAAGATAAATG+TGG | - | chr3.2:74988451-74988470 | MS.gene045074:intron | 10.0% |
| !! | TGTTTGTATATAAATAATTT+AGG | + | chr3.2:74988302-74988321 | None:intergenic | 10.0% |
| !!! | TATTTTTAAAAAATGATCAA+TGG | + | chr3.2:74988439-74988458 | None:intergenic | 10.0% |
| !! | ATATGTTATAATAAGAAACT+AGG | - | chr3.2:74986623-74986642 | MS.gene045074:intron | 15.0% |
| !! | CATATTATAAAGAATTAAGA+TGG | + | chr3.2:74985483-74985502 | None:intergenic | 15.0% |
| !! | CATCTTAATTCTTTATAATA+TGG | - | chr3.2:74985481-74985500 | MS.gene045074:intron | 15.0% |
| !! | TCCTATTTATAAAAATAGAT+GGG | - | chr3.2:74986921-74986940 | MS.gene045074:CDS | 15.0% |
| !! | TTAACTTAGTAAAGTATAAT+TGG | - | chr3.2:74988326-74988345 | MS.gene045074:intron | 15.0% |
| !! | TTCCTATTTATAAAAATAGA+TGG | - | chr3.2:74986920-74986939 | MS.gene045074:CDS | 15.0% |
| !!! | ATTTTTTTTTACTAACTTAC+TGG | - | chr3.2:74985135-74985154 | MS.gene045074:intron | 15.0% |
| !!! | TAACTCAATATTTTAAAAAC+TGG | + | chr3.2:74987059-74987078 | None:intergenic | 15.0% |
| !! | AACATATGTATATGAATTTC+AGG | + | chr3.2:74985050-74985069 | None:intergenic | 20.0% |
| !! | CATGAAAAATAGTTATAAGT+GGG | - | chr3.2:74988195-74988214 | MS.gene045074:intron | 20.0% |
| !! | CCACTATTTAATTAAAATCT+TGG | + | chr3.2:74985896-74985915 | None:intergenic | 20.0% |
| !! | CCTATTTATAAAAATAGATG+GGG | - | chr3.2:74986922-74986941 | MS.gene045074:CDS | 20.0% |
| !! | CTATTTATAAAAATAGATGG+GGG | - | chr3.2:74986923-74986942 | MS.gene045074:CDS | 20.0% |
| !! | GAACATTCCAAAATAAATAA+AGG | - | chr3.2:74988724-74988743 | MS.gene045074:intron | 20.0% |
| !! | TCAGTTATATTTACAAAATC+AGG | + | chr3.2:74987281-74987300 | None:intergenic | 20.0% |
| !! | TTACACATATTGATATATCA+AGG | + | chr3.2:74985214-74985233 | None:intergenic | 20.0% |
| !!! | AGATTTTAATTAAATAGTGG+CGG | - | chr3.2:74985896-74985915 | MS.gene045074:intron | 20.0% |
| !!! | CATATTTTTTGCTTATATTC+TGG | - | chr3.2:74988025-74988044 | MS.gene045074:CDS | 20.0% |
| !!! | CCAAGATTTTAATTAAATAG+TGG | - | chr3.2:74985893-74985912 | MS.gene045074:intron | 20.0% |
| !!! | TGAATTGTATATTTTCATTG+AGG | + | chr3.2:74985457-74985476 | None:intergenic | 20.0% |
| ! | AAAGTACACTGTTAAACAAA+AGG | - | chr3.2:74986766-74986785 | MS.gene045074:intron | 25.0% |
| ! | ACTACAGTAAATTCGTATTT+CGG | - | chr3.2:74987572-74987591 | MS.gene045074:intron | 25.0% |
| ! | ACTGCAATTAATTAAATTGC+TGG | + | chr3.2:74987450-74987469 | None:intergenic | 25.0% |
| ! | ACTTATGATTCAAGTCATTA+TGG | - | chr3.2:74987368-74987387 | MS.gene045074:intron | 25.0% |
| ! | ATGATAACATGATTGAACTT+AGG | + | chr3.2:74984978-74984997 | None:intergenic | 25.0% |
| ! | CAATAACATCATTAAAACCT+AGG | - | chr3.2:74988116-74988135 | MS.gene045074:CDS | 25.0% |
| ! | CCAAGAAAATCTATAGATAT+AGG | + | chr3.2:74986794-74986813 | None:intergenic | 25.0% |
| ! | GAAAAAATGGATGTATCATA+TGG | + | chr3.2:74986327-74986346 | None:intergenic | 25.0% |
| ! | GCATGAAAAATAGTTATAAG+TGG | - | chr3.2:74988194-74988213 | MS.gene045074:intron | 25.0% |
| ! | TCAAAAATTATTCTGCAATG+TGG | + | chr3.2:74987773-74987792 | None:intergenic | 25.0% |
| ! | TCAAATATATCGAATGACAT+TGG | - | chr3.2:74986551-74986570 | MS.gene045074:intron | 25.0% |
| ! | TCCTTATATAGAAAAGAACA+CGG | + | chr3.2:74986882-74986901 | None:intergenic | 25.0% |
| ! | TGTTGTAACCTGTATATAAT+TGG | - | chr3.2:74985424-74985443 | MS.gene045074:intron | 25.0% |
| ! | TTCTCATAATATACCACATT+AGG | + | chr3.2:74988574-74988593 | None:intergenic | 25.0% |
| ! | TTCTCTCTGTCAATAAAAAA+GGG | - | chr3.2:74987110-74987129 | MS.gene045074:CDS | 25.0% |
| ! | TTTAGTTAAAGATGTTCAGA+AGG | - | chr3.2:74986712-74986731 | MS.gene045074:intron | 25.0% |
| ! | TTTCAGTTAGAATGAATCTT+GGG | - | chr3.2:74987252-74987271 | MS.gene045074:CDS | 25.0% |
| ! | TTTCTCTCTGTCAATAAAAA+AGG | - | chr3.2:74987109-74987128 | MS.gene045074:CDS | 25.0% |
| !! | AATGAGAAGAGAAAATTTTG+AGG | + | chr3.2:74986284-74986303 | None:intergenic | 25.0% |
| !! | CCTATATCTATAGATTTTCT+TGG | - | chr3.2:74986791-74986810 | MS.gene045074:intron | 25.0% |
| !! | TCCAAAATAAATAAAGGTGT+AGG | - | chr3.2:74988730-74988749 | MS.gene045074:intron | 25.0% |
| !! | TGTAATATTTGTGTTACTAC+AGG | - | chr3.2:74987837-74987856 | MS.gene045074:CDS | 25.0% |
| !! | TTCTAGAAATTTATTCTCTG+TGG | + | chr3.2:74986184-74986203 | None:intergenic | 25.0% |
| !! | TTTTCAGTTAGAATGAATCT+TGG | - | chr3.2:74987251-74987270 | MS.gene045074:CDS | 25.0% |
| !!! | ATAACATTTTGAGTTTTCCT+AGG | + | chr3.2:74988136-74988155 | None:intergenic | 25.0% |
| !!! | CCCCATCTATTTTTATAAAT+AGG | + | chr3.2:74986925-74986944 | None:intergenic | 25.0% |
| !!! | TCCTACACCTTTATTTATTT+TGG | + | chr3.2:74988734-74988753 | None:intergenic | 25.0% |
| AATAGTACTCAACAATGAGA+TGG | - | chr3.2:74987622-74987641 | MS.gene045074:intron | 30.0% | |
| AGTAAGAAAAGTCTAGTAGA+TGG | - | chr3.2:74986091-74986110 | MS.gene045074:CDS | 30.0% | |
| ATCTTGGAAACTATATGCAA+AGG | + | chr3.2:74985880-74985899 | None:intergenic | 30.0% | |
| ATGGAATCTTACATTTGTTC+TGG | - | chr3.2:74987999-74988018 | MS.gene045074:CDS | 30.0% | |
| ATGTGGTATATTATGAGAAC+TGG | - | chr3.2:74988575-74988594 | MS.gene045074:intron | 30.0% | |
| ATTCAGAGCTATGTGAAATA+TGG | - | chr3.2:74988057-74988076 | MS.gene045074:CDS | 30.0% | |
| ATTTGTTTGGAAAAACCATG+TGG | - | chr3.2:74986032-74986051 | MS.gene045074:CDS | 30.0% | |
| CATACATATCCTGGAAAAAA+TGG | + | chr3.2:74986340-74986359 | None:intergenic | 30.0% | |
| CTTGGACAATAATATAGACA+TGG | - | chr3.2:74988172-74988191 | MS.gene045074:intron | 30.0% | |
| GAAATACGAATTTACTGTAG+TGG | + | chr3.2:74987573-74987592 | None:intergenic | 30.0% | |
| GAATTAGAGAATTCAATTGC+TGG | - | chr3.2:74985294-74985313 | MS.gene045074:intron | 30.0% | |
| GATATAATTGACACATGGTT+AGG | - | chr3.2:74986116-74986135 | MS.gene045074:CDS | 30.0% | |
| GTACAAGACCAATTATATAC+AGG | + | chr3.2:74985435-74985454 | None:intergenic | 30.0% | |
| TATGATTCAAGTCATTATGG+TGG | - | chr3.2:74987371-74987390 | MS.gene045074:intron | 30.0% | |
| TATTAGCAGAAAGTTCAAAG+TGG | + | chr3.2:74988618-74988637 | None:intergenic | 30.0% | |
| TCATCAGTTATGTGATTGAT+TGG | + | chr3.2:74988513-74988532 | None:intergenic | 30.0% | |
| TGAACTTTCTGCTAATATCA+GGG | - | chr3.2:74988621-74988640 | MS.gene045074:intron | 30.0% | |
| TGGAATCAGATAAATGATCA+TGG | - | chr3.2:74987497-74987516 | MS.gene045074:intron | 30.0% | |
| TGGATGATATAATTGACACA+TGG | - | chr3.2:74986111-74986130 | MS.gene045074:CDS | 30.0% | |
| TTCAGTTAGAATGAATCTTG+GGG | - | chr3.2:74987253-74987272 | MS.gene045074:CDS | 30.0% | |
| TTCATTCATTCCCTCTTTAT+AGG | - | chr3.2:74987474-74987493 | MS.gene045074:intron | 30.0% | |
| TTGAACTTTCTGCTAATATC+AGG | - | chr3.2:74988620-74988639 | MS.gene045074:intron | 30.0% | |
| TTTCTTGGATTAAAGATCCT+TGG | - | chr3.2:74986806-74986825 | MS.gene045074:intron | 30.0% | |
| ! | ACCGTGTTCTTTTCTATATA+AGG | - | chr3.2:74986878-74986897 | MS.gene045074:CDS | 30.0% |
| ! | CTTTTGAATCACTTTGTCAA+AGG | - | chr3.2:74987928-74987947 | MS.gene045074:CDS | 30.0% |
| !! | GTTTAACAGTGTACTTTTTG+AGG | + | chr3.2:74986763-74986782 | None:intergenic | 30.0% |
| !! | TGTTTTTGTGTGTCCATTTT+TGG | + | chr3.2:74985576-74985595 | None:intergenic | 30.0% |
| !! | TTATGTGATTGATTGGTTTG+AGG | + | chr3.2:74988506-74988525 | None:intergenic | 30.0% |
| !! | TTTTAATTAAATAGTGGCGG+TGG | - | chr3.2:74985899-74985918 | MS.gene045074:intron | 30.0% |
| !!! | ATGATACATCCATTTTTTCC+AGG | - | chr3.2:74986328-74986347 | MS.gene045074:CDS | 30.0% |
| !!! | CATTTTTTCCAGGATATGTA+TGG | - | chr3.2:74986338-74986357 | MS.gene045074:CDS | 30.0% |
| !!! | TCCTTGGAAACATTTTTTAC+AGG | + | chr3.2:74987662-74987681 | None:intergenic | 30.0% |
| AACCCAACTGCAATGTAAAT+GGG | - | chr3.2:74986973-74986992 | MS.gene045074:CDS | 35.0% | |
| ACAATACTTTCACCAAGTAC+AGG | - | chr3.2:74987599-74987618 | MS.gene045074:intron | 35.0% | |
| AGAACCTTGAGAACAATAGT+TGG | + | chr3.2:74987749-74987768 | None:intergenic | 35.0% | |
| AGACATACTAGAAGAAGAGA+TGG | + | chr3.2:74984940-74984959 | None:intergenic | 35.0% | |
| AGCAGTTTCTCTCATATCAA+AGG | + | chr3.2:74985810-74985829 | None:intergenic | 35.0% | |
| ATCCCATTTACATTGCAGTT+GGG | + | chr3.2:74986978-74986997 | None:intergenic | 35.0% | |
| ATCTACTTGTAGTCTCATCT+TGG | - | chr3.2:74988154-74988173 | MS.gene045074:intron | 35.0% | |
| ATCTGATTCCACCTATAAAG+AGG | + | chr3.2:74987488-74987507 | None:intergenic | 35.0% | |
| ATTCATTCCCTCTTTATAGG+TGG | - | chr3.2:74987477-74987496 | MS.gene045074:intron | 35.0% | |
| CTAAGAGCAATTGCAAAGTT+TGG | - | chr3.2:74986653-74986672 | MS.gene045074:intron | 35.0% | |
| GAAGTAATCATTGCTCATCA+TGG | - | chr3.2:74985602-74985621 | MS.gene045074:intron | 35.0% | |
| GAATCACTTTGTCAAAGGAA+TGG | - | chr3.2:74987933-74987952 | MS.gene045074:CDS | 35.0% | |
| GATGACATAACTCTATACGT+AGG | + | chr3.2:74988271-74988290 | None:intergenic | 35.0% | |
| GCCTGTAAAAAATGTTTCCA+AGG | - | chr3.2:74987658-74987677 | MS.gene045074:intron | 35.0% | |
| TAACTTACCAGCATCATTTG+AGG | + | chr3.2:74986854-74986873 | None:intergenic | 35.0% | |
| TACAATTGCAGACCTATTGA+TGG | + | chr3.2:74984890-74984909 | None:intergenic | 35.0% | |
| TCTATACGTAGGACTAAGTT+AGG | + | chr3.2:74988260-74988279 | None:intergenic | 35.0% | |
| TCTGATTCCACCTATAAAGA+GGG | + | chr3.2:74987487-74987506 | None:intergenic | 35.0% | |
| TGAGAAATTAACTCACCGTA+TGG | - | chr3.2:74988530-74988549 | MS.gene045074:intron | 35.0% | |
| TGGCTGCAGTTATGTTATTA+TGG | - | chr3.2:74985501-74985520 | MS.gene045074:intron | 35.0% | |
| TGTGGTGTAGAGAAATGAAA+AGG | - | chr3.2:74986050-74986069 | MS.gene045074:CDS | 35.0% | |
| TTGAGTACTATTCCTGTACT+TGG | + | chr3.2:74987614-74987633 | None:intergenic | 35.0% | |
| TTTCAACACTTGAGCAAACT+TGG | + | chr3.2:74987327-74987346 | None:intergenic | 35.0% | |
| TTTCATTTCTCTACACCACA+TGG | + | chr3.2:74986050-74986069 | None:intergenic | 35.0% | |
| ! | AACACTACTTTGAAGGCAAA+TGG | - | chr3.2:74986365-74986384 | MS.gene045074:CDS | 35.0% |
| ! | AGCTAACCTAAGAAGCATAA+AGG | + | chr3.2:74985771-74985790 | None:intergenic | 35.0% |
| ! | ATGCTTCTTAGGTTAGCTAA+TGG | - | chr3.2:74985773-74985792 | MS.gene045074:CDS | 35.0% |
| ! | ATTTGTGTTACTACAGGACA+GGG | - | chr3.2:74987843-74987862 | MS.gene045074:CDS | 35.0% |
| ! | TATTTGTGTTACTACAGGAC+AGG | - | chr3.2:74987842-74987861 | MS.gene045074:CDS | 35.0% |
| ! | TTTTTCCAGGATATGTATGG+TGG | - | chr3.2:74986341-74986360 | MS.gene045074:CDS | 35.0% |
| !! | TAAAAACTGGTTTGAACTGC+CGG | + | chr3.2:74987046-74987065 | None:intergenic | 35.0% |
| !! | TCCAAGGTACTTTTCAATCA+TGG | - | chr3.2:74985842-74985861 | MS.gene045074:intron | 35.0% |
| !! | TCCATGATTGAAAAGTACCT+TGG | + | chr3.2:74985846-74985865 | None:intergenic | 35.0% |
| !!! | AGTGTTTTGATATGTCAACG+CGG | + | chr3.2:74985979-74985998 | None:intergenic | 35.0% |
| !!! | GGAAACATTTTTTACAGGCA+TGG | + | chr3.2:74987657-74987676 | None:intergenic | 35.0% |
| !!! | TTTTTTCCATCTGCATGTGA+AGG | + | chr3.2:74986526-74986545 | None:intergenic | 35.0% |
| AAAGCAGTAATAGGTGCAAG+TGG | - | chr3.2:74987871-74987890 | MS.gene045074:CDS | 40.0% | |
| AATGAAAAGGACACACGTAG+AGG | - | chr3.2:74986063-74986082 | MS.gene045074:CDS | 40.0% | |
| ACCCTTTCTTGGATCACTTA+CGG | + | chr3.2:74988767-74988786 | None:intergenic | 40.0% | |
| AGGGAAAGCCTTAGAAGTAA+GGG | - | chr3.2:74988640-74988659 | MS.gene045074:intron | 40.0% | |
| AGGGAAGTGAAAGCAGTAAT+AGG | - | chr3.2:74987862-74987881 | MS.gene045074:CDS | 40.0% | |
| AGTAGTGTATTTGCACCACA+TGG | - | chr3.2:74986578-74986597 | MS.gene045074:intron | 40.0% | |
| AGTTCAGCTTCAAGTGGTAT+TGG | - | chr3.2:74985737-74985756 | MS.gene045074:CDS | 40.0% | |
| ATGCCAAACTGGAAACAAAG+AGG | + | chr3.2:74985544-74985563 | None:intergenic | 40.0% | |
| ATGGATGTTATCCAAGAAGG+GGG | - | chr3.2:74985665-74985684 | MS.gene045074:intron | 40.0% | |
| ATTCCACCATACAAAGCTTG+TGG | + | chr3.2:74986680-74986699 | None:intergenic | 40.0% | |
| CAACCCAACTGCAATGTAAA+TGG | - | chr3.2:74986972-74986991 | MS.gene045074:CDS | 40.0% | |
| CAGCTGCATAATCAACCATA+CGG | + | chr3.2:74988548-74988567 | None:intergenic | 40.0% | |
| CAGTGATTCTTGCTAGTAGA+GGG | - | chr3.2:74986483-74986502 | MS.gene045074:CDS | 40.0% | |
| CATGGAAAACTCTTGAAAGC+AGG | - | chr3.2:74986596-74986615 | MS.gene045074:intron | 40.0% | |
| CGAATTTACTGTAGTGGTCA+TGG | + | chr3.2:74987567-74987586 | None:intergenic | 40.0% | |
| CTACTAGCAAGAATCACTGA+TGG | + | chr3.2:74986482-74986501 | None:intergenic | 40.0% | |
| CTGTAACAGAAAGATGAGAG+TGG | + | chr3.2:74987141-74987160 | None:intergenic | 40.0% | |
| GATCCCATTTACATTGCAGT+TGG | + | chr3.2:74986979-74986998 | None:intergenic | 40.0% | |
| GATGGATGTTATCCAAGAAG+GGG | - | chr3.2:74985664-74985683 | MS.gene045074:intron | 40.0% | |
| GATTATTGCTGCAACTTCAG+AGG | - | chr3.2:74987903-74987922 | MS.gene045074:CDS | 40.0% | |
| GATTTCTCTATGGATCCCAA+GGG | + | chr3.2:74987213-74987232 | None:intergenic | 40.0% | |
| GGAGCAGTTACAGAAGAAAA+AGG | + | chr3.2:74987961-74987980 | None:intergenic | 40.0% | |
| GGATGGATGTTATCCAAGAA+GGG | - | chr3.2:74985663-74985682 | MS.gene045074:intron | 40.0% | |
| GGCATTACAAGTCTATTCCA+TGG | + | chr3.2:74986461-74986480 | None:intergenic | 40.0% | |
| GTAAATGGGATCAAACCAAC+CGG | - | chr3.2:74986987-74987006 | MS.gene045074:CDS | 40.0% | |
| GTCACCAACTATTGTTCTCA+AGG | - | chr3.2:74987742-74987761 | MS.gene045074:intron | 40.0% | |
| GTTAAAGATGTTCAGAAGGC+TGG | - | chr3.2:74986716-74986735 | MS.gene045074:intron | 40.0% | |
| GTTAGCTAATGGTGTAGCAA+AGG | - | chr3.2:74985784-74985803 | MS.gene045074:CDS | 40.0% | |
| GTTGAACAACGATTGTACCA+CGG | + | chr3.2:74986956-74986975 | None:intergenic | 40.0% | |
| TATGCAGCTGATACCTAATG+TGG | - | chr3.2:74988558-74988577 | MS.gene045074:intron | 40.0% | |
| TCAAAGCCTCGATTTCTCTA+TGG | + | chr3.2:74987223-74987242 | None:intergenic | 40.0% | |
| TCAGTGATTCTTGCTAGTAG+AGG | - | chr3.2:74986482-74986501 | MS.gene045074:CDS | 40.0% | |
| TCTCTCTCTTCTCCATCAAT+AGG | - | chr3.2:74984875-74984894 | MS.gene045074:CDS | 40.0% | |
| TTCTTCTGTAACTGCTCCTA+GGG | - | chr3.2:74987963-74987982 | MS.gene045074:CDS | 40.0% | |
| TTGAACAACGATTGTACCAC+GGG | + | chr3.2:74986955-74986974 | None:intergenic | 40.0% | |
| TTTCTTCTGTAACTGCTCCT+AGG | - | chr3.2:74987962-74987981 | MS.gene045074:CDS | 40.0% | |
| ! | ACTACTTTGAAGGCAAATGG+TGG | - | chr3.2:74986368-74986387 | MS.gene045074:CDS | 40.0% |
| ! | GCTTTCAAGAGTTTTCCATG+TGG | + | chr3.2:74986596-74986615 | None:intergenic | 40.0% |
| ! | GCTTTGTATGGTGGAATAGT+TGG | - | chr3.2:74986683-74986702 | MS.gene045074:intron | 40.0% |
| ! | TAAAGGTGTAGGAAAGCTTG+TGG | - | chr3.2:74988741-74988760 | MS.gene045074:intron | 40.0% |
| ! | TTTGGTCCACAAGCTTTGTA+TGG | - | chr3.2:74986671-74986690 | MS.gene045074:intron | 40.0% |
| !! | GAGAACAATAGTTGGTGACA+TGG | + | chr3.2:74987741-74987760 | None:intergenic | 40.0% |
| !! | GTTGGTGACATGGATGATAA+TGG | + | chr3.2:74987731-74987750 | None:intergenic | 40.0% |
| AAAGATGTTCAGAAGGCTGG+AGG | - | chr3.2:74986719-74986738 | MS.gene045074:intron | 45.0% | |
| AACAACATGGGAAGCTTCCA+TGG | - | chr3.2:74986441-74986460 | MS.gene045074:CDS | 45.0% | |
| AAGATGTTCAGAAGGCTGGA+GGG | - | chr3.2:74986720-74986739 | MS.gene045074:intron | 45.0% | |
| ACAAGGCATGGGAACAACAT+GGG | - | chr3.2:74986429-74986448 | MS.gene045074:CDS | 45.0% | |
| ACCATACCTTCACATGCAGA+TGG | - | chr3.2:74986517-74986536 | MS.gene045074:intron | 45.0% | |
| AGAAAGTTCAAAGTGGTCCC+CGG | + | chr3.2:74988611-74988630 | None:intergenic | 45.0% | |
| ATCGTCGATGCTCGAAGATT+GGG | - | chr3.2:74985642-74985661 | MS.gene045074:intron | 45.0% | |
| CAGGGAAAGCCTTAGAAGTA+AGG | - | chr3.2:74988639-74988658 | MS.gene045074:intron | 45.0% | |
| CATACCTGATGATAGACCCT+AGG | + | chr3.2:74987982-74988001 | None:intergenic | 45.0% | |
| CCAAACTGGAAACAAAGAGG+AGG | + | chr3.2:74985541-74985560 | None:intergenic | 45.0% | |
| CGATTTCTCTATGGATCCCA+AGG | + | chr3.2:74987214-74987233 | None:intergenic | 45.0% | |
| CGCACTTGCAGACATTTGTT+TGG | - | chr3.2:74986019-74986038 | MS.gene045074:CDS | 45.0% | |
| CTAGGGTCTATCATCAGGTA+TGG | - | chr3.2:74987980-74987999 | MS.gene045074:CDS | 45.0% | |
| GCACAATATGAGCTTCCTTC+AGG | - | chr3.2:74987176-74987195 | MS.gene045074:CDS | 45.0% | |
| GCATCTGCTTCTGCCAAAAA+TGG | - | chr3.2:74985560-74985579 | MS.gene045074:intron | 45.0% | |
| GCCGTAAGTGATCCAAGAAA+GGG | - | chr3.2:74988763-74988782 | MS.gene045074:intron | 45.0% | |
| GGATGTACAGCAAGATCACA+AGG | - | chr3.2:74988472-74988491 | MS.gene045074:intron | 45.0% | |
| GGGATGGATGTTATCCAAGA+AGG | - | chr3.2:74985662-74985681 | MS.gene045074:intron | 45.0% | |
| GTAAGTGATCCAAGAAAGGG+TGG | - | chr3.2:74988766-74988785 | MS.gene045074:intron | 45.0% | |
| GTTGTCAGTTCAGCTTCAAG+TGG | - | chr3.2:74985731-74985750 | MS.gene045074:CDS | 45.0% | |
| TCCATCTGCATGTGAAGGTA+TGG | + | chr3.2:74986521-74986540 | None:intergenic | 45.0% | |
| TGGGATCCATAGAGAAATCG+AGG | - | chr3.2:74987214-74987233 | MS.gene045074:CDS | 45.0% | |
| TGGTGGCAACACTACTTTGA+AGG | - | chr3.2:74986358-74986377 | MS.gene045074:CDS | 45.0% | |
| TGTTGCCACCATACATATCC+TGG | + | chr3.2:74986349-74986368 | None:intergenic | 45.0% | |
| ! | AGTACCTTGGAAGCATGAAG+AGG | + | chr3.2:74985833-74985852 | None:intergenic | 45.0% |
| ! | CCTCCTCTTTGTTTCCAGTT+TGG | - | chr3.2:74985538-74985557 | MS.gene045074:intron | 45.0% |
| ! | TCAGCTTCAAGTGGTATTGG+TGG | - | chr3.2:74985740-74985759 | MS.gene045074:CDS | 45.0% |
| !! | GATGATAATGGTCTCTTCCC+CGG | + | chr3.2:74987719-74987738 | None:intergenic | 45.0% |
| AATGGGATCAAACCAACCGG+CGG | - | chr3.2:74986990-74987009 | MS.gene045074:CDS | 50.0% | |
| AGAACTGGACAACAGTGACC+GGG | - | chr3.2:74988590-74988609 | MS.gene045074:intron | 50.0% | |
| AGGTTGAACCGGAAACCAGA+CGG | + | chr3.2:74987017-74987036 | None:intergenic | 50.0% | |
| ATCTGATGCAGCCTCAATCG+CGG | - | chr3.2:74985944-74985963 | MS.gene045074:CDS | 50.0% | |
| ATGTCTGCAAGTGCGCAACT+TGG | + | chr3.2:74986014-74986033 | None:intergenic | 50.0% | |
| CACAAGGCATGGGAACAACA+TGG | - | chr3.2:74986428-74986447 | MS.gene045074:CDS | 50.0% | |
| GACATATTGTCCCACCAGCA+AGG | + | chr3.2:74988681-74988700 | None:intergenic | 50.0% | |
| GAGAACTGGACAACAGTGAC+CGG | - | chr3.2:74988589-74988608 | MS.gene045074:intron | 50.0% | |
| GATCGTCGATGCTCGAAGAT+TGG | - | chr3.2:74985641-74985660 | MS.gene045074:intron | 50.0% | |
| GCAGGAAAACCACCCTTTCT+TGG | + | chr3.2:74988778-74988797 | None:intergenic | 50.0% | |
| GCAGTAATAGGTGCAAGTGG+AGG | - | chr3.2:74987874-74987893 | MS.gene045074:CDS | 50.0% | |
| GCGGTGCCTTTATGCTTCTT+AGG | - | chr3.2:74985762-74985781 | MS.gene045074:CDS | 50.0% | |
| GGACATGGCCCTTACTTCTA+AGG | + | chr3.2:74988651-74988670 | None:intergenic | 50.0% | |
| GGCCGTAAGTGATCCAAGAA+AGG | - | chr3.2:74988762-74988781 | MS.gene045074:intron | 50.0% | |
| GGCTGGAGGGATATTGACAT+TGG | - | chr3.2:74986733-74986752 | MS.gene045074:intron | 50.0% | |
| GTTGTTCCCATGCCTTGTGA+AGG | + | chr3.2:74986427-74986446 | None:intergenic | 50.0% | |
| GTTTGAACTGCCGGATCAAC+AGG | + | chr3.2:74987037-74987056 | None:intergenic | 50.0% | |
| TCCGGTTCAACCTGTTGATC+CGG | - | chr3.2:74987024-74987043 | MS.gene045074:CDS | 50.0% | |
| TCGATGCTCGAAGATTGGGA+TGG | - | chr3.2:74985646-74985665 | MS.gene045074:intron | 50.0% | |
| TGCTCCTAGGGTCTATCATC+AGG | - | chr3.2:74987975-74987994 | MS.gene045074:CDS | 50.0% | |
| TGCTCCTCTTCATGCTTCCA+AGG | - | chr3.2:74985826-74985845 | MS.gene045074:intron | 50.0% | |
| TGTGGCTGCTGCTCTTTGTT+TGG | - | chr3.2:74985706-74985725 | MS.gene045074:CDS | 50.0% | |
| TTAAATAGTGGCGGTGGACG+AGG | - | chr3.2:74985905-74985924 | MS.gene045074:intron | 50.0% | |
| ! | AACAAAGAGGAGGCATGCGA+TGG | + | chr3.2:74985531-74985550 | None:intergenic | 50.0% |
| ! | AGAAAGGGTGGTTTTCCTGC+AGG | - | chr3.2:74988778-74988797 | MS.gene045074:intron | 50.0% |
| ! | ATCATTTGAGGCCCACCTGA+AGG | + | chr3.2:74986842-74986861 | None:intergenic | 50.0% |
| ! | GGTCCACAAGCTTTGTATGG+TGG | - | chr3.2:74986674-74986693 | MS.gene045074:intron | 50.0% |
| ! | GTGGCTGCTGCTCTTTGTTT+GGG | - | chr3.2:74985707-74985726 | MS.gene045074:CDS | 50.0% |
| !! | AGAACTAGCTGGCCTTCACA+AGG | - | chr3.2:74986412-74986431 | MS.gene045074:CDS | 50.0% |
| !! | CTTCGAGCATCGACGATCAT+CGG | + | chr3.2:74985639-74985658 | None:intergenic | 50.0% |
| !! | GCTTCAAGTGGTATTGGTGG+CGG | - | chr3.2:74985743-74985762 | MS.gene045074:CDS | 50.0% |
| ACATGCAGTGGATGCAGCTG+TGG | - | chr3.2:74985688-74985707 | MS.gene045074:CDS | 55.0% | |
| ACGAAATTGGCAGGAGCAGG+CGG | + | chr3.2:74987692-74987711 | None:intergenic | 55.0% | |
| ACGACGAAATTGGCAGGAGC+AGG | + | chr3.2:74987695-74987714 | None:intergenic | 55.0% | |
| AGGGAACCAGAAAGGCCTGA+AGG | + | chr3.2:74987194-74987213 | None:intergenic | 55.0% | |
| AGGTGGGCCTCAAATGATGC+TGG | - | chr3.2:74986844-74986863 | MS.gene045074:CDS | 55.0% | |
| CATGTCCTTCAGAGCCTTGC+TGG | - | chr3.2:74988664-74988683 | MS.gene045074:intron | 55.0% | |
| CTTGGTATGCCTCCTCCTTC+AGG | - | chr3.2:74986824-74986843 | MS.gene045074:CDS | 55.0% | |
| GAACTGGACAACAGTGACCG+GGG | - | chr3.2:74988591-74988610 | MS.gene045074:intron | 55.0% | |
| GAAGGCAAATGGTGGCCTCT+CGG | - | chr3.2:74986376-74986395 | MS.gene045074:CDS | 55.0% | |
| GAGCTTCCTTCAGGCCTTTC+TGG | - | chr3.2:74987185-74987204 | MS.gene045074:CDS | 55.0% | |
| GCAGTTCCAGGAGAACTAGC+TGG | - | chr3.2:74986401-74986420 | MS.gene045074:CDS | 55.0% | |
| GGATCCCAAGGGAACCAGAA+AGG | + | chr3.2:74987202-74987221 | None:intergenic | 55.0% | |
| GGCAGAAGCAGATGCCAAAC+TGG | + | chr3.2:74985555-74985574 | None:intergenic | 55.0% | |
| GTATGCCTCCTCCTTCAGGT+GGG | - | chr3.2:74986828-74986847 | MS.gene045074:CDS | 55.0% | |
| GTGGGACAGCTCTCATGACA+TGG | - | chr3.2:74988213-74988232 | MS.gene045074:intron | 55.0% | |
| TCCTGCCAATTTCGTCGTGC+CGG | - | chr3.2:74987697-74987716 | MS.gene045074:intron | 55.0% | |
| TCCTTCAGAGCCTTGCTGGT+GGG | - | chr3.2:74988668-74988687 | MS.gene045074:intron | 55.0% | |
| ! | ATTTGAGGCCCACCTGAAGG+AGG | + | chr3.2:74986839-74986858 | None:intergenic | 55.0% |
| ! | CTGAAGGAGGAGGCATACCA+AGG | + | chr3.2:74986826-74986845 | None:intergenic | 55.0% |
| ! | GCCGGATCAACAGGTTGAAC+CGG | + | chr3.2:74987028-74987047 | None:intergenic | 55.0% |
| ! | TGAAGGCCAGCTAGTTCTCC+TGG | + | chr3.2:74986410-74986429 | None:intergenic | 55.0% |
| !! | AGCTGGCCTTCACAAGGCAT+GGG | - | chr3.2:74986418-74986437 | MS.gene045074:CDS | 55.0% |
| !! | CAGCAAGGCTCTGAAGGACA+TGG | + | chr3.2:74988666-74988685 | None:intergenic | 55.0% |
| !! | CAGGCCTTTCTGGTTCCCTT+GGG | - | chr3.2:74987195-74987214 | MS.gene045074:CDS | 55.0% |
| !! | TAGCTGGCCTTCACAAGGCA+TGG | - | chr3.2:74986417-74986436 | MS.gene045074:CDS | 55.0% |
| !! | TCAGGCCTTTCTGGTTCCCT+TGG | - | chr3.2:74987194-74987213 | MS.gene045074:CDS | 55.0% |
| AGCAGGCGGTCGAACATCCT+TGG | + | chr3.2:74987678-74987697 | None:intergenic | 60.0% | |
| CCAAGAAGGGGGACATGCAG+TGG | - | chr3.2:74985676-74985695 | MS.gene045074:intron | 60.0% | |
| CCACTGCATGTCCCCCTTCT+TGG | + | chr3.2:74985679-74985698 | None:intergenic | 60.0% | |
| CCTGCCAATTTCGTCGTGCC+GGG | - | chr3.2:74987698-74987717 | MS.gene045074:intron | 60.0% | |
| CTCCTGGAACTGCTACCGAG+AGG | + | chr3.2:74986394-74986413 | None:intergenic | 60.0% | |
| CTGCCAATTTCGTCGTGCCG+GGG | - | chr3.2:74987699-74987718 | MS.gene045074:intron | 60.0% | |
| CTTCCCCGGCACGACGAAAT+TGG | + | chr3.2:74987705-74987724 | None:intergenic | 60.0% | |
| GGTATGCCTCCTCCTTCAGG+TGG | - | chr3.2:74986827-74986846 | MS.gene045074:CDS | 60.0% | |
| GTCCTTCAGAGCCTTGCTGG+TGG | - | chr3.2:74988667-74988686 | MS.gene045074:intron | 60.0% | |
| ! | TCCCACCAGCAAGGCTCTGA+AGG | + | chr3.2:74988672-74988691 | None:intergenic | 60.0% |
| !! | TAGATGGGGGCATTGTCCCG+TGG | - | chr3.2:74986936-74986955 | MS.gene045074:CDS | 60.0% |
| AAACCAACCGGCGGACCGTC+TGG | - | chr3.2:74986999-74987018 | MS.gene045074:CDS | 65.0% | |
| AAACCAGACGGTCCGCCGGT+TGG | + | chr3.2:74987005-74987024 | None:intergenic | 65.0% | |
| CCCGGCACGACGAAATTGGC+AGG | + | chr3.2:74987701-74987720 | None:intergenic | 65.0% | |
| GGCCTCTCGGTAGCAGTTCC+AGG | - | chr3.2:74986389-74986408 | MS.gene045074:CDS | 65.0% | |
| GGTCAGCGCAACCGCGATTG+AGG | + | chr3.2:74985958-74985977 | None:intergenic | 65.0% | |
| TGAGGCCCACCTGAAGGAGG+AGG | + | chr3.2:74986836-74986855 | None:intergenic | 65.0% | |
| CCGGAAACCAGACGGTCCGC+CGG | + | chr3.2:74987009-74987028 | None:intergenic | 70.0% | |
| ! | CCGGCGGACCGTCTGGTTTC+CGG | - | chr3.2:74987006-74987025 | MS.gene045074:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 74984872 | 74988807 | 74984872 | ID=MS.gene045074 |
| chr3.2 | mRNA | 74984872 | 74988807 | 74984872 | ID=MS.gene045074.t1;Parent=MS.gene045074 |
| chr3.2 | exon | 74988783 | 74988807 | 74988783 | ID=MS.gene045074.t1.exon1;Parent=MS.gene045074.t1 |
| chr3.2 | CDS | 74988783 | 74988807 | 74988783 | ID=cds.MS.gene045074.t1;Parent=MS.gene045074.t1 |
| chr3.2 | exon | 74987832 | 74988169 | 74987832 | ID=MS.gene045074.t1.exon2;Parent=MS.gene045074.t1 |
| chr3.2 | CDS | 74987832 | 74988169 | 74987832 | ID=cds.MS.gene045074.t1;Parent=MS.gene045074.t1 |
| chr3.2 | exon | 74986814 | 74987329 | 74986814 | ID=MS.gene045074.t1.exon3;Parent=MS.gene045074.t1 |
| chr3.2 | CDS | 74986814 | 74987329 | 74986814 | ID=cds.MS.gene045074.t1;Parent=MS.gene045074.t1 |
| chr3.2 | exon | 74986283 | 74986518 | 74986283 | ID=MS.gene045074.t1.exon4;Parent=MS.gene045074.t1 |
| chr3.2 | CDS | 74986283 | 74986518 | 74986283 | ID=cds.MS.gene045074.t1;Parent=MS.gene045074.t1 |
| chr3.2 | exon | 74985916 | 74986183 | 74985916 | ID=MS.gene045074.t1.exon5;Parent=MS.gene045074.t1 |
| chr3.2 | CDS | 74985916 | 74986183 | 74985916 | ID=cds.MS.gene045074.t1;Parent=MS.gene045074.t1 |
| chr3.2 | exon | 74985683 | 74985820 | 74985683 | ID=MS.gene045074.t1.exon6;Parent=MS.gene045074.t1 |
| chr3.2 | CDS | 74985683 | 74985820 | 74985683 | ID=cds.MS.gene045074.t1;Parent=MS.gene045074.t1 |
| chr3.2 | exon | 74984872 | 74985114 | 74984872 | ID=MS.gene045074.t1.exon7;Parent=MS.gene045074.t1 |
| chr3.2 | CDS | 74984872 | 74985114 | 74984872 | ID=cds.MS.gene045074.t1;Parent=MS.gene045074.t1 |
| Gene Sequence |
| Protein sequence |
