Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049472.t1 | KEH34407.1 | 83.2 | 572 | 52 | 3 | 1 | 528 | 6 | 577 | 2.30E-265 | 924.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049472.t1 | Q680I5 | 53.2 | 573 | 215 | 9 | 2 | 527 | 11 | 577 | 9.6e-164 | 578.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049472.t1 | A0A072UXY0 | 83.2 | 572 | 52 | 3 | 1 | 528 | 6 | 577 | 1.6e-265 | 924.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049472.t1 | MTR_3g466000 | 83.214 | 560 | 50 | 3 | 13 | 528 | 18 | 577 | 0.0 | 886 |
| MS.gene049472.t1 | MTR_3g087950 | 66.492 | 573 | 144 | 5 | 4 | 528 | 10 | 582 | 0.0 | 731 |
| MS.gene049472.t1 | MTR_6g090280 | 43.718 | 581 | 268 | 11 | 6 | 528 | 44 | 623 | 3.46e-142 | 423 |
| MS.gene049472.t1 | MTR_6g090280 | 42.647 | 476 | 217 | 8 | 108 | 528 | 1 | 475 | 1.40e-123 | 370 |
| MS.gene049472.t1 | MTR_6g090280 | 45.393 | 445 | 205 | 7 | 6 | 413 | 44 | 487 | 3.51e-116 | 353 |
| MS.gene049472.t1 | MTR_5g084180 | 68.868 | 106 | 29 | 2 | 5 | 106 | 17 | 122 | 2.61e-24 | 98.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049472.t1 | AT4G39640 | 54.371 | 572 | 206 | 9 | 3 | 527 | 8 | 571 | 0.0 | 600 |
| MS.gene049472.t1 | AT4G39640 | 54.371 | 572 | 206 | 9 | 3 | 527 | 8 | 571 | 0.0 | 600 |
| MS.gene049472.t1 | AT4G39650 | 53.403 | 573 | 214 | 9 | 2 | 527 | 11 | 577 | 0.0 | 578 |
| MS.gene049472.t1 | AT4G29210 | 43.662 | 568 | 257 | 12 | 23 | 528 | 71 | 637 | 2.22e-149 | 442 |
| MS.gene049472.t1 | AT4G29210 | 44.651 | 430 | 201 | 7 | 27 | 420 | 76 | 504 | 4.91e-123 | 370 |
| MS.gene049472.t1 | AT1G69820 | 58.257 | 218 | 63 | 4 | 260 | 449 | 2 | 219 | 1.87e-80 | 251 |
Find 140 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTTCCTTCAGACCTTTC+TGG | 0.189248 | 3.2:-56697291 | MS.gene049472:CDS |
| ATTTCCACTGCTTCCATAAA+TGG | 0.190298 | 3.2:-56699236 | MS.gene049472:CDS |
| AAACATTTGTAACTATAAAT+TGG | 0.239835 | 3.2:+56696241 | None:intergenic |
| GTTTAGCAGTGTATCGTTTA+AGG | 0.249177 | 3.2:+56697947 | None:intergenic |
| GTGGAGCATTTATGCTTCTT+AGG | 0.259055 | 3.2:-56699037 | MS.gene049472:CDS |
| CAGACCTTTCTGGCGCCCTT+GGG | 0.270126 | 3.2:-56697281 | MS.gene049472:CDS |
| TGTGGTTGCTGCTTTATGTT+TGG | 0.280456 | 3.2:-56699093 | MS.gene049472:CDS |
| ACAAATGTTTCGGACCATTC+TGG | 0.284997 | 3.2:-56696228 | MS.gene049472:CDS |
| GGACATGGCCCCTGCTTCTA+AGG | 0.295256 | 3.2:+56696292 | None:intergenic |
| TCATTGCCTCAATTTGTCTA+TGG | 0.296458 | 3.2:+56697256 | None:intergenic |
| AAACATAGAAAGAACCTTTA+GGG | 0.308155 | 3.2:+56696819 | None:intergenic |
| CTAAGTATGCCTCCTCCTTC+AGG | 0.310743 | 3.2:-56697883 | MS.gene049472:CDS |
| TCAGACCTTTCTGGCGCCCT+TGG | 0.317407 | 3.2:-56697282 | MS.gene049472:CDS |
| GTGGTTGCTGCTTTATGTTT+GGG | 0.323882 | 3.2:-56699092 | MS.gene049472:CDS |
| CTAGTGATATTTACAAAATC+AGG | 0.348284 | 3.2:+56697198 | None:intergenic |
| TGGTCTAGCAATAGCAGTTC+CGG | 0.349888 | 3.2:-56698326 | MS.gene049472:CDS |
| TATGGTCCAAATGCTTTCTA+TGG | 0.358152 | 3.2:-56698043 | MS.gene049472:intron |
| TTTCGCAGCTAATACCAAAC+TGG | 0.359857 | 3.2:-56696383 | MS.gene049472:intron |
| ATTTATAGTTACAAATGTTT+CGG | 0.363932 | 3.2:-56696238 | MS.gene049472:CDS |
| GTCCGCCATTGCTCTAAAAT+CGG | 0.366163 | 3.2:-56699158 | MS.gene049472:CDS |
| TAGGGCAATAGTTGGTGATA+TGG | 0.367941 | 3.2:+56696837 | None:intergenic |
| CAACTTACCAGCATCGTTAC+AGG | 0.373723 | 3.2:+56697856 | None:intergenic |
| TTCAATATTATTCCAGTACT+TGG | 0.375460 | 3.2:+56696964 | None:intergenic |
| CCTGCCAACTTTGTCGCGCC+AGG | 0.383292 | 3.2:-56696877 | MS.gene049472:CDS |
| GCAGTTCCGGGAGAACTTGC+TGG | 0.388227 | 3.2:-56698313 | MS.gene049472:CDS |
| CATGTCCTAAAACCCTTTGC+TGG | 0.390693 | 3.2:-56696276 | MS.gene049472:CDS |
| CCAAGAAAATCAATAGATAT+AGG | 0.401064 | 3.2:+56697916 | None:intergenic |
| CTAAGAGTGATTTCAAAGTA+TGG | 0.401738 | 3.2:-56698061 | MS.gene049472:CDS |
| ATCTCATAACTAACCCAGTT+TGG | 0.417128 | 3.2:+56696369 | None:intergenic |
| ATGCTTCTTAGGTTAGCTAA+TGG | 0.432318 | 3.2:-56699026 | MS.gene049472:CDS |
| GGTCCACCATAGAAAGCATT+TGG | 0.433494 | 3.2:+56698037 | None:intergenic |
| ACTTTGAGTACTAATCAATA+TGG | 0.435171 | 3.2:-56697108 | MS.gene049472:intron |
| CTAATCAATATGGTGGCAAA+TGG | 0.435623 | 3.2:-56697098 | MS.gene049472:CDS |
| GGCTCCAAGGTTCTATCATC+AGG | 0.438235 | 3.2:-56696562 | MS.gene049472:intron |
| AAGTTCCTTTCACCAAGTAC+TGG | 0.441783 | 3.2:-56696976 | MS.gene049472:CDS |
| TGGAGGGGCAAACATTATTC+CGG | 0.442852 | 3.2:-56696645 | MS.gene049472:CDS |
| GAAGGAAAACCACCCTTTCT+CGG | 0.454525 | 3.2:+56696165 | None:intergenic |
| ATCACCAACTATTGCCCTAA+AGG | 0.461822 | 3.2:-56696833 | MS.gene049472:intron |
| ACTGGGTTAGTTATGAGATC+TGG | 0.462039 | 3.2:-56696365 | MS.gene049472:CDS |
| CACCGTTGTTTGTTCCAGAA+TGG | 0.463693 | 3.2:+56696214 | None:intergenic |
| AGTTCAAAGTGTTCACCATA+TGG | 0.465251 | 3.2:+56696336 | None:intergenic |
| AACAACATGGTAAGCTTCCA+TGG | 0.466710 | 3.2:-56698273 | MS.gene049472:CDS |
| AGTCCAGGTTCAAGTGGTAT+TGG | 0.471417 | 3.2:-56699062 | MS.gene049472:CDS |
| TCCTAAAACCCTTTGCTGGT+GGG | 0.471834 | 3.2:-56696272 | MS.gene049472:CDS |
| AATACTACTTTGAAGTCAAT+AGG | 0.472553 | 3.2:-56698349 | MS.gene049472:CDS |
| CCTAAAACCCTTTGCTGGTG+GGG | 0.481001 | 3.2:-56696271 | MS.gene049472:CDS |
| GAAGCTCCTCCGCGATCAGA+TGG | 0.484080 | 3.2:-56698197 | MS.gene049472:CDS |
| GTCCTAAAACCCTTTGCTGG+TGG | 0.484388 | 3.2:-56696273 | MS.gene049472:CDS |
| TCAGAGAATTCCTTAGAAGC+AGG | 0.484703 | 3.2:-56696302 | MS.gene049472:CDS |
| ACGATACACTGCTAAACAAA+AGG | 0.486357 | 3.2:-56697941 | MS.gene049472:CDS |
| GGTTCAAGTGGTATTGGTGG+TGG | 0.486626 | 3.2:-56699056 | MS.gene049472:CDS |
| CCAGGTTCAAGTGGTATTGG+TGG | 0.488566 | 3.2:-56699059 | MS.gene049472:CDS |
| CAAATTGCCCCACCAGCAAA+GGG | 0.489041 | 3.2:+56696264 | None:intergenic |
| CTTCCCTGGCGCGACAAAGT+TGG | 0.489876 | 3.2:+56696873 | None:intergenic |
| GCGACAAAGTTGGCAGGAGC+TGG | 0.489883 | 3.2:+56696883 | None:intergenic |
| CATAAAACGGCTTCATTCCA+TGG | 0.491697 | 3.2:+56696592 | None:intergenic |
| GGTCTAGCAATAGCAGTTCC+GGG | 0.493839 | 3.2:-56698325 | MS.gene049472:CDS |
| GCAAATTGCCCCACCAGCAA+AGG | 0.496917 | 3.2:+56696263 | None:intergenic |
| CCACCAATACCACTTGAACC+TGG | 0.498702 | 3.2:+56699059 | None:intergenic |
| CTACGAGCAATTATCTCAGC+AGG | 0.499103 | 3.2:+56698235 | None:intergenic |
| GGCAGTCAGTGATCCGAGAA+AGG | 0.502271 | 3.2:-56696178 | MS.gene049472:CDS |
| TCCGCCATTGCTCTAAAATC+GGG | 0.504344 | 3.2:-56699157 | MS.gene049472:CDS |
| CCATGCAGTGGATGCAGCTG+TGG | 0.504771 | 3.2:-56699111 | MS.gene049472:CDS |
| TGGTTGCTGCTTTATGTTTG+GGG | 0.504989 | 3.2:-56699091 | MS.gene049472:CDS |
| GTTGGTGATATGGATGATAA+TGG | 0.505734 | 3.2:+56696847 | None:intergenic |
| TTTATGAATCACTTTGTCCA+TGG | 0.508041 | 3.2:-56696609 | MS.gene049472:CDS |
| CTATTATACAATAAGAAACT+AGG | 0.508879 | 3.2:-56698091 | MS.gene049472:CDS |
| TAATGAACGACAAAGGTCTT+CGG | 0.509200 | 3.2:-56698156 | MS.gene049472:CDS |
| AGAACCTTTAGGGCAATAGT+TGG | 0.509201 | 3.2:+56696829 | None:intergenic |
| AGACCTTTCTGGCGCCCTTG+GGG | 0.511666 | 3.2:-56697280 | MS.gene049472:CDS |
| CTGAAGGAGGAGGCATACTT+AGG | 0.513436 | 3.2:+56697884 | None:intergenic |
| GAGATCTGGACAACTCCATA+TGG | 0.513769 | 3.2:-56696351 | MS.gene049472:CDS |
| CATGGAAATCTCTTGAAAGT+AGG | 0.514136 | 3.2:-56698118 | MS.gene049472:CDS |
| GATGATAATGGTCTCTTCCC+TGG | 0.515652 | 3.2:+56696859 | None:intergenic |
| CGGAGTGTGTTTGCACCACA+TGG | 0.519127 | 3.2:-56698136 | MS.gene049472:CDS |
| TATGCTATGAGAATGAATCT+TGG | 0.525741 | 3.2:-56697225 | MS.gene049472:CDS |
| AGGAATTCTCTGATATCAGC+AGG | 0.528201 | 3.2:+56696312 | None:intergenic |
| TGCATTTATGGTACACGTCA+AGG | 0.528660 | 3.2:+56697011 | None:intergenic |
| CTGAGATAATTGCTCGTAGA+GGG | 0.531028 | 3.2:-56698231 | MS.gene049472:CDS |
| GGACCCCAAGGGCGCCAGAA+AGG | 0.533287 | 3.2:+56697277 | None:intergenic |
| TATGGTACACGTCAAGGAAA+CGG | 0.534176 | 3.2:+56697017 | None:intergenic |
| GGGATGGATGTTATCCATGA+AGG | 0.543035 | 3.2:-56699137 | MS.gene049472:CDS |
| AATACCACTTGAACCTGGAC+TGG | 0.543182 | 3.2:+56699064 | None:intergenic |
| AGGTGGACCTGTAACGATGC+TGG | 0.544589 | 3.2:-56697863 | MS.gene049472:intron |
| CCTGGCGCGACAAAGTTGGC+AGG | 0.546658 | 3.2:+56696877 | None:intergenic |
| AGAACTTGCTGGCTTTCACA+TGG | 0.547076 | 3.2:-56698302 | MS.gene049472:CDS |
| TTCGCAGCTAATACCAAACT+GGG | 0.547751 | 3.2:-56696382 | MS.gene049472:intron |
| TGGAATCAGATCAATGATCA+TGG | 0.548192 | 3.2:-56697078 | MS.gene049472:CDS |
| TTGCTGGCTTTCACATGGCG+TGG | 0.548677 | 3.2:-56698297 | MS.gene049472:CDS |
| CTGCCAACTTTGTCGCGCCA+GGG | 0.552264 | 3.2:-56696876 | MS.gene049472:CDS |
| TGAAAGCCAGCAAGTTCTCC+CGG | 0.555393 | 3.2:+56698307 | None:intergenic |
| TTGTCCATTTATGGAAGCAG+TGG | 0.556475 | 3.2:+56699232 | None:intergenic |
| GGCTTTACAAGTCTCGCCCA+TGG | 0.557354 | 3.2:+56698256 | None:intergenic |
| AAGTTGGCAGGAGCTGGTGG+TGG | 0.557997 | 3.2:+56696889 | None:intergenic |
| TTTAGAGCAATGGCGGACAT+CGG | 0.563881 | 3.2:+56699163 | None:intergenic |
| CAATTTGTCTATGGACCCCA+AGG | 0.564162 | 3.2:+56697265 | None:intergenic |
| GGTTGCTGCTTTATGTTTGG+GGG | 0.565597 | 3.2:-56699090 | MS.gene049472:CDS |
| TTTATGCTGTCACGGCTCCA+AGG | 0.566715 | 3.2:-56696575 | MS.gene049472:CDS |
| AATAATATTGAACAATGAGA+TGG | 0.567223 | 3.2:-56696953 | MS.gene049472:CDS |
| TGGGGTCCATAGACAAATTG+AGG | 0.568572 | 3.2:-56697262 | MS.gene049472:CDS |
| TATGATGTAATCGCTCATCA+TGG | 0.569891 | 3.2:-56699197 | MS.gene049472:CDS |
| GTTAGCTAATGGTGCAGCAA+AGG | 0.570001 | 3.2:-56699015 | MS.gene049472:CDS |
| GTATCGTTTAAGGTCTTCCA+CGG | 0.570359 | 3.2:+56697957 | None:intergenic |
| GCAGTCAGTGATCCGAGAAA+GGG | 0.571477 | 3.2:-56696177 | MS.gene049472:CDS |
| TTATTCCAGTACTTGGTGAA+AGG | 0.579633 | 3.2:+56696971 | None:intergenic |
| GGAGCCGTGACAGCATAAAA+CGG | 0.580708 | 3.2:+56696579 | None:intergenic |
| GGATGGATGTTATCCATGAA+GGG | 0.581232 | 3.2:-56699136 | MS.gene049472:CDS |
| CCACAGCTGCATCCACTGCA+TGG | 0.584510 | 3.2:+56699111 | None:intergenic |
| CACATGGCGTGGAAACAACA+TGG | 0.586387 | 3.2:-56698286 | MS.gene049472:CDS |
| GTTGCCAGTCCAGGTTCAAG+TGG | 0.588058 | 3.2:-56699068 | MS.gene049472:CDS |
| CAGAGAATTCCTTAGAAGCA+GGG | 0.589836 | 3.2:-56696301 | MS.gene049472:CDS |
| ACATTATTCCGGAACAGCAG+AGG | 0.591193 | 3.2:-56696634 | MS.gene049472:CDS |
| CAACGGTGTTAGAAAGATTG+TGG | 0.591538 | 3.2:-56696199 | MS.gene049472:CDS |
| TATACCTGATGATAGAACCT+TGG | 0.593171 | 3.2:+56696558 | None:intergenic |
| ACAAAGTTGGCAGGAGCTGG+TGG | 0.593176 | 3.2:+56696886 | None:intergenic |
| AGTATGCCTCCTCCTTCAGG+TGG | 0.596225 | 3.2:-56697880 | MS.gene049472:CDS |
| ATCGTTACAGGTCCACCTGA+AGG | 0.596421 | 3.2:+56697868 | None:intergenic |
| AGCGGTTTCTCTCATATCAA+AGG | 0.598918 | 3.2:+56698992 | None:intergenic |
| GTCAGTGATCCGAGAAAGGG+TGG | 0.605438 | 3.2:-56696174 | MS.gene049472:CDS |
| CTTAAAAGCACGAAGAGGAG+CGG | 0.606169 | 3.2:+56698974 | None:intergenic |
| AATAGTAGGTGCAAGTGGAG+GGG | 0.613136 | 3.2:-56696660 | MS.gene049472:intron |
| TTTACCTTAAAAGCACGAAG+AGG | 0.613255 | 3.2:+56698969 | None:intergenic |
| ACAGGTCCACCTGAAGGAGG+AGG | 0.614345 | 3.2:+56697874 | None:intergenic |
| CCATTGCTCTAAAATCGGGA+TGG | 0.617720 | 3.2:-56699153 | MS.gene049472:CDS |
| GAAATGTCTCAAACACCTGA+AGG | 0.619995 | 3.2:+56696147 | None:intergenic |
| AGAGCAATGGCGGACATCGG+TGG | 0.623459 | 3.2:+56699166 | None:intergenic |
| GATGGATGTTATCCATGAAG+GGG | 0.628365 | 3.2:-56699135 | MS.gene049472:CDS |
| AGAGAATTCCTTAGAAGCAG+GGG | 0.628550 | 3.2:-56696300 | MS.gene049472:CDS |
| TTGAGTACTAATCAATATGG+TGG | 0.636987 | 3.2:-56697105 | MS.gene049472:intron |
| AGGGCGCCAGAAAGGTCTGA+AGG | 0.639518 | 3.2:+56697285 | None:intergenic |
| ACAACATGGTAAGCTTCCAT+GGG | 0.640600 | 3.2:-56698272 | MS.gene049472:CDS |
| GACCATTCTGGAACAAACAA+CGG | 0.652332 | 3.2:-56696216 | MS.gene049472:CDS |
| ACAGATATAATGAACGACAA+AGG | 0.666346 | 3.2:-56698163 | MS.gene049472:CDS |
| GCTGAGATAATTGCTCGTAG+AGG | 0.669882 | 3.2:-56698232 | MS.gene049472:CDS |
| GTTACAGGTCCACCTGAAGG+AGG | 0.671439 | 3.2:+56697871 | None:intergenic |
| GGGATATTAAGTATTAACCG+TGG | 0.687421 | 3.2:-56697974 | MS.gene049472:intron |
| ACTACTTTGAAGTCAATAGG+TGG | 0.699074 | 3.2:-56698346 | MS.gene049472:CDS |
| ATGGATGTTATCCATGAAGG+GGG | 0.704860 | 3.2:-56699134 | MS.gene049472:CDS |
| AATTTGTCTATGGACCCCAA+GGG | 0.739993 | 3.2:+56697266 | None:intergenic |
| ACTTTCAAGAGATTTCCATG+TGG | 0.774772 | 3.2:+56698121 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTATATTTCAAACT+CGG | - | chr3.2:56697629-56697648 | MS.gene049472:intron | 10.0% |
| !! | AAACATTTGTAACTATAAAT+TGG | + | chr3.2:56699186-56699205 | None:intergenic | 15.0% |
| !! | ATTTATAGTTACAAATGTTT+CGG | - | chr3.2:56699186-56699205 | MS.gene049472:CDS | 15.0% |
| !! | TATGAGAAAAAAAATTTCAT+CGG | - | chr3.2:56697752-56697771 | MS.gene049472:intron | 15.0% |
| !! | TTTAATGATTATAAAATCCA+TGG | + | chr3.2:56697661-56697680 | None:intergenic | 15.0% |
| !! | TTTATTTATATTTCAAACTC+GGG | - | chr3.2:56697630-56697649 | MS.gene049472:intron | 15.0% |
| !!! | AAAAATACATTTAAGCTTTT+AGG | - | chr3.2:56698951-56698970 | MS.gene049472:intron | 15.0% |
| !!! | AAATTTTTTTTCTCATAAAG+TGG | + | chr3.2:56697749-56697768 | None:intergenic | 15.0% |
| !!! | ATGGTTTTAAATAATTTAGA+CGG | - | chr3.2:56696528-56696547 | MS.gene049472:intron | 15.0% |
| !!! | TAATTTTCTCAAATTATTAG+TGG | - | chr3.2:56696876-56696895 | MS.gene049472:CDS | 15.0% |
| !! | AAGAAAAAAAACATGAAGTA+GGG | + | chr3.2:56698036-56698055 | None:intergenic | 20.0% |
| !! | AATAATATTGAACAATGAGA+TGG | - | chr3.2:56698471-56698490 | MS.gene049472:intron | 20.0% |
| !! | CTATTATACAATAAGAAACT+AGG | - | chr3.2:56697333-56697352 | MS.gene049472:intron | 20.0% |
| !! | TAAGAAAAAAAACATGAAGT+AGG | + | chr3.2:56698037-56698056 | None:intergenic | 20.0% |
| !!! | ATGTACTTTTTATCAATGAA+AGG | - | chr3.2:56698057-56698076 | MS.gene049472:CDS | 20.0% |
| !!! | ATTTAGTGACGAAAATATTT+TGG | - | chr3.2:56696609-56696628 | MS.gene049472:CDS | 20.0% |
| !!! | GAAATCTAAAACACTAATTT+TGG | + | chr3.2:56697915-56697934 | None:intergenic | 20.0% |
| !!! | TGTACTTTTTATCAATGAAA+GGG | - | chr3.2:56698058-56698077 | MS.gene049472:CDS | 20.0% |
| !!! | TTAACCACATTAGTTTTTTT+TGG | - | chr3.2:56697714-56697733 | MS.gene049472:intron | 20.0% |
| !!! | TTTCGAATTTAGATTTTATG+CGG | - | chr3.2:56697843-56697862 | MS.gene049472:intron | 20.0% |
| ! | AAAACATAGAAAGAACCTTT+AGG | + | chr3.2:56698609-56698628 | None:intergenic | 25.0% |
| ! | AAACATAGAAAGAACCTTTA+GGG | + | chr3.2:56698608-56698627 | None:intergenic | 25.0% |
| ! | AAGACCAAAAATGTGAAATT+CGG | + | chr3.2:56697033-56697052 | None:intergenic | 25.0% |
| ! | ACTTTGAGTACTAATCAATA+TGG | - | chr3.2:56698316-56698335 | MS.gene049472:CDS | 25.0% |
| ! | CCAAGAAAATCAATAGATAT+AGG | + | chr3.2:56697511-56697530 | None:intergenic | 25.0% |
| ! | CTAGTGATATTTACAAAATC+AGG | + | chr3.2:56698229-56698248 | None:intergenic | 25.0% |
| ! | TAATTACAACTTACAAGTGT+TGG | + | chr3.2:56696844-56696863 | None:intergenic | 25.0% |
| ! | TACTAATTATAGAGCATGTT+TGG | - | chr3.2:56696701-56696720 | MS.gene049472:intron | 25.0% |
| ! | TCGTATATGGAATAGAAAAA+TGG | - | chr3.2:56696509-56696528 | MS.gene049472:intron | 25.0% |
| ! | TGCATAATCTTGATCAAAAT+CGG | - | chr3.2:56696661-56696680 | MS.gene049472:intron | 25.0% |
| ! | TTCAATATTATTCCAGTACT+TGG | + | chr3.2:56698463-56698482 | None:intergenic | 25.0% |
| ! | TTTCTCATAAAGTGGTTAAA+GGG | + | chr3.2:56697741-56697760 | None:intergenic | 25.0% |
| !! | TCATTGATTATTGTCGTATA+TGG | - | chr3.2:56696496-56696515 | MS.gene049472:intron | 25.0% |
| !! | TTTTCTCATAAAGTGGTTAA+AGG | + | chr3.2:56697742-56697761 | None:intergenic | 25.0% |
| !! | TTTTTGGACACATTTTTCAT+AGG | + | chr3.2:56698511-56698530 | None:intergenic | 25.0% |
| !!! | AATACTACTTTGAAGTCAAT+AGG | - | chr3.2:56697075-56697094 | MS.gene049472:CDS | 25.0% |
| !!! | CCTATATCTATTGATTTTCT+TGG | - | chr3.2:56697508-56697527 | MS.gene049472:intron | 25.0% |
| !!! | TCGTTGCATATTTTAGTAAT+AGG | - | chr3.2:56698906-56698925 | MS.gene049472:intron | 25.0% |
| !!! | TGCATATTTTAGTAATAGGA+GGG | - | chr3.2:56698910-56698929 | MS.gene049472:intron | 25.0% |
| !!! | TGTACCATAAATGCATTTTT+TGG | - | chr3.2:56698421-56698440 | MS.gene049472:intron | 25.0% |
| !!! | TGTTTTTGTTTGTCCATTTA+TGG | + | chr3.2:56696204-56696223 | None:intergenic | 25.0% |
| !!! | TTGCATATTTTAGTAATAGG+AGG | - | chr3.2:56698909-56698928 | MS.gene049472:intron | 25.0% |
| AAATCTGTAACTATGAAGCA+CGG | + | chr3.2:56696949-56696968 | None:intergenic | 30.0% | |
| ACAGATATAATGAACGACAA+AGG | - | chr3.2:56697261-56697280 | MS.gene049472:CDS | 30.0% | |
| AGCTGCGAAAAATAACTAAA+TGG | + | chr3.2:56699031-56699050 | None:intergenic | 30.0% | |
| CGAACCAAAAAATGCATTTA+TGG | + | chr3.2:56698428-56698447 | None:intergenic | 30.0% | |
| CTAAGAGTGATTTCAAAGTA+TGG | - | chr3.2:56697363-56697382 | MS.gene049472:intron | 30.0% | |
| GAACATCTTTAACTAGATTG+AGG | + | chr3.2:56697419-56697438 | None:intergenic | 30.0% | |
| TATGCTATGAGAATGAATCT+TGG | - | chr3.2:56698199-56698218 | MS.gene049472:CDS | 30.0% | |
| TCTAGTTAAAGATGTTCAGA+AGG | - | chr3.2:56697422-56697441 | MS.gene049472:intron | 30.0% | |
| TCTCAAATTATTAGTGGTGT+CGG | - | chr3.2:56696882-56696901 | MS.gene049472:CDS | 30.0% | |
| TTGAGTACTAATCAATATGG+TGG | - | chr3.2:56698319-56698338 | MS.gene049472:CDS | 30.0% | |
| TTTATGAATCACTTTGTCCA+TGG | - | chr3.2:56698815-56698834 | MS.gene049472:intron | 30.0% | |
| ! | CGACTTTTTATACTTCAGAA+TGG | - | chr3.2:56698729-56698748 | MS.gene049472:intron | 30.0% |
| ! | GCTATTTAGAATGTTAGAGT+TGG | - | chr3.2:56697789-56697808 | MS.gene049472:intron | 30.0% |
| !! | ATTTTGGTCTTCGATATGAT+CGG | - | chr3.2:56696625-56696644 | MS.gene049472:CDS | 30.0% |
| AAAACATGAAGTAGGGTTAC+CGG | + | chr3.2:56698029-56698048 | None:intergenic | 35.0% | |
| AAAGATGTTCAGAAGGCTAA+AGG | - | chr3.2:56697429-56697448 | MS.gene049472:intron | 35.0% | |
| AAGATGTTCAGAAGGCTAAA+GGG | - | chr3.2:56697430-56697449 | MS.gene049472:intron | 35.0% | |
| ACCAAAAATGTGAAATTCGG+AGG | + | chr3.2:56697030-56697049 | None:intergenic | 35.0% | |
| ACGATACACTGCTAAACAAA+AGG | - | chr3.2:56697483-56697502 | MS.gene049472:intron | 35.0% | |
| ACTTTCAAGAGATTTCCATG+TGG | + | chr3.2:56697306-56697325 | None:intergenic | 35.0% | |
| ATCTCATAACTAACCCAGTT+TGG | + | chr3.2:56699058-56699077 | None:intergenic | 35.0% | |
| ATTTCCACTGCTTCCATAAA+TGG | - | chr3.2:56696188-56696207 | MS.gene049472:CDS | 35.0% | |
| CATGGAAATCTCTTGAAAGT+AGG | - | chr3.2:56697306-56697325 | MS.gene049472:CDS | 35.0% | |
| CTAATCAATATGGTGGCAAA+TGG | - | chr3.2:56698326-56698345 | MS.gene049472:CDS | 35.0% | |
| CTAGACTGTTGGATTAAGAT+CGG | + | chr3.2:56697967-56697986 | None:intergenic | 35.0% | |
| GGGACCAAAAAAAACTAATG+TGG | + | chr3.2:56697721-56697740 | None:intergenic | 35.0% | |
| GGGATATTAAGTATTAACCG+TGG | - | chr3.2:56697450-56697469 | MS.gene049472:intron | 35.0% | |
| GTTTAGCAGTGTATCGTTTA+AGG | + | chr3.2:56697480-56697499 | None:intergenic | 35.0% | |
| TAATGAACGACAAAGGTCTT+CGG | - | chr3.2:56697268-56697287 | MS.gene049472:CDS | 35.0% | |
| TATACCTGATGATAGAACCT+TGG | + | chr3.2:56698869-56698888 | None:intergenic | 35.0% | |
| TATGATGTAATCGCTCATCA+TGG | - | chr3.2:56696227-56696246 | MS.gene049472:CDS | 35.0% | |
| TATGGTCCAAATGCTTTCTA+TGG | - | chr3.2:56697381-56697400 | MS.gene049472:intron | 35.0% | |
| TCATTGCCTCAATTTGTCTA+TGG | + | chr3.2:56698171-56698190 | None:intergenic | 35.0% | |
| TGGAATCAGATCAATGATCA+TGG | - | chr3.2:56698346-56698365 | MS.gene049472:CDS | 35.0% | |
| TTAACTAGATTGAGGCCAAT+CGG | + | chr3.2:56697411-56697430 | None:intergenic | 35.0% | |
| TTCAGTGACCGAAAAGAATT+CGG | - | chr3.2:56696573-56696592 | MS.gene049472:CDS | 35.0% | |
| TTTCATCGGAATGTCAATTG+CGG | - | chr3.2:56697766-56697785 | MS.gene049472:intron | 35.0% | |
| ! | ACCTCCGAATTTCACATTTT+TGG | - | chr3.2:56697026-56697045 | MS.gene049472:CDS | 35.0% |
| ! | AGTTCAAAGTGTTCACCATA+TGG | + | chr3.2:56699091-56699110 | None:intergenic | 35.0% |
| ! | ATGCTTCTTAGGTTAGCTAA+TGG | - | chr3.2:56696398-56696417 | MS.gene049472:intron | 35.0% |
| ! | GCTCTATACCGAATTCTTTT+CGG | + | chr3.2:56696584-56696603 | None:intergenic | 35.0% |
| ! | GTCTTTTTCCAGGATATGTA+TGG | - | chr3.2:56697048-56697067 | MS.gene049472:CDS | 35.0% |
| ! | TTATTCCAGTACTTGGTGAA+AGG | + | chr3.2:56698456-56698475 | None:intergenic | 35.0% |
| ! | TTTACCTTAAAAGCACGAAG+AGG | + | chr3.2:56696458-56696477 | None:intergenic | 35.0% |
| ! | TTTTATGCGGTCAACATAAG+TGG | - | chr3.2:56697856-56697875 | MS.gene049472:intron | 35.0% |
| ! | TTTTTCCAGGATATGTATGG+TGG | - | chr3.2:56697051-56697070 | MS.gene049472:CDS | 35.0% |
| !! | ACTACTTTGAAGTCAATAGG+TGG | - | chr3.2:56697078-56697097 | MS.gene049472:CDS | 35.0% |
| !! | GTTAAGTGATGGATTGGTTA+TGG | + | chr3.2:56698994-56699013 | None:intergenic | 35.0% |
| !! | GTTGGTGATATGGATGATAA+TGG | + | chr3.2:56698580-56698599 | None:intergenic | 35.0% |
| !!! | CACATTTTTGGTCTTTTTCC+AGG | - | chr3.2:56697038-56697057 | MS.gene049472:CDS | 35.0% |
| AAACTTCCTTCAGACCTTTC+TGG | - | chr3.2:56698133-56698152 | MS.gene049472:CDS | 40.0% | |
| AAAGCAATAGTAGGTGCAAG+TGG | - | chr3.2:56698759-56698778 | MS.gene049472:intron | 40.0% | |
| AACAACATGGTAAGCTTCCA+TGG | - | chr3.2:56697151-56697170 | MS.gene049472:intron | 40.0% | |
| AAGTTCCTTTCACCAAGTAC+TGG | - | chr3.2:56698448-56698467 | MS.gene049472:intron | 40.0% | |
| AATTTGTCTATGGACCCCAA+GGG | + | chr3.2:56698161-56698180 | None:intergenic | 40.0% | |
| ACAAATGTTTCGGACCATTC+TGG | - | chr3.2:56699196-56699215 | MS.gene049472:CDS | 40.0% | |
| ACAACATGGTAAGCTTCCAT+GGG | - | chr3.2:56697152-56697171 | MS.gene049472:intron | 40.0% | |
| AGAGAATTCCTTAGAAGCAG+GGG | - | chr3.2:56699124-56699143 | MS.gene049472:CDS | 40.0% | |
| AGCGGTTTCTCTCATATCAA+AGG | + | chr3.2:56696435-56696454 | None:intergenic | 40.0% | |
| AGGAATTCTCTGATATCAGC+AGG | + | chr3.2:56699115-56699134 | None:intergenic | 40.0% | |
| ATCACCAACTATTGCCCTAA+AGG | - | chr3.2:56698591-56698610 | MS.gene049472:intron | 40.0% | |
| ATGGATGTTATCCATGAAGG+GGG | - | chr3.2:56696290-56696309 | MS.gene049472:CDS | 40.0% | |
| CAGAGAATTCCTTAGAAGCA+GGG | - | chr3.2:56699123-56699142 | MS.gene049472:CDS | 40.0% | |
| CATAAAAACCTCTGCTGTTC+CGG | + | chr3.2:56698801-56698820 | None:intergenic | 40.0% | |
| CATAAAACGGCTTCATTCCA+TGG | + | chr3.2:56698835-56698854 | None:intergenic | 40.0% | |
| CTGAGATAATTGCTCGTAGA+GGG | - | chr3.2:56697193-56697212 | MS.gene049472:CDS | 40.0% | |
| GATATGCTTTCTCCCAAGTT+TGG | - | chr3.2:56698259-56698278 | MS.gene049472:CDS | 40.0% | |
| GATGGATGTTATCCATGAAG+GGG | - | chr3.2:56696289-56696308 | MS.gene049472:CDS | 40.0% | |
| GGAGAAGTGAAAGCAATAGT+AGG | - | chr3.2:56698750-56698769 | MS.gene049472:intron | 40.0% | |
| GGAGGGCTAAAATCGTTAAT+CGG | - | chr3.2:56698927-56698946 | MS.gene049472:intron | 40.0% | |
| GGATGGATGTTATCCATGAA+GGG | - | chr3.2:56696288-56696307 | MS.gene049472:CDS | 40.0% | |
| GTAACTATGAAGCACGGATA+CGG | + | chr3.2:56696943-56696962 | None:intergenic | 40.0% | |
| GTTTCGCATCAGTTAAGTGA+TGG | + | chr3.2:56699005-56699024 | None:intergenic | 40.0% | |
| TATGGTACACGTCAAGGAAA+CGG | + | chr3.2:56698410-56698429 | None:intergenic | 40.0% | |
| TATTGCCACCATACATATCC+TGG | + | chr3.2:56697059-56697078 | None:intergenic | 40.0% | |
| TCAGAGAATTCCTTAGAAGC+AGG | - | chr3.2:56699122-56699141 | MS.gene049472:CDS | 40.0% | |
| TGCATTTATGGTACACGTCA+AGG | + | chr3.2:56698416-56698435 | None:intergenic | 40.0% | |
| TTCAAACTCGGGTATATCCA+TGG | - | chr3.2:56697641-56697660 | MS.gene049472:intron | 40.0% | |
| TTCATCGGAATGTCAATTGC+GGG | - | chr3.2:56697767-56697786 | MS.gene049472:intron | 40.0% | |
| TTCGCAGCTAATACCAAACT+GGG | - | chr3.2:56699042-56699061 | MS.gene049472:CDS | 40.0% | |
| TTGGAAATGTGTTAAGCCAC+TGG | - | chr3.2:56696720-56696739 | MS.gene049472:intron | 40.0% | |
| TTGTCCATTTATGGAAGCAG+TGG | + | chr3.2:56696195-56696214 | None:intergenic | 40.0% | |
| TTTCGCAGCTAATACCAAAC+TGG | - | chr3.2:56699041-56699060 | MS.gene049472:CDS | 40.0% | |
| ! | CAACGGTGTTAGAAAGATTG+TGG | - | chr3.2:56699225-56699244 | MS.gene049472:CDS | 40.0% |
| ! | CTGATTTTTCCATCTGATCG+CGG | + | chr3.2:56697239-56697258 | None:intergenic | 40.0% |
| ! | GTATCGTTTAAGGTCTTCCA+CGG | + | chr3.2:56697470-56697489 | None:intergenic | 40.0% |
| ! | GTGGAGCATTTATGCTTCTT+AGG | - | chr3.2:56696387-56696406 | MS.gene049472:intron | 40.0% |
| !! | AATTGGTGATGGTAGGTAAC+CGG | - | chr3.2:56698007-56698026 | MS.gene049472:intron | 40.0% |
| !! | ACTGGGTTAGTTATGAGATC+TGG | - | chr3.2:56699059-56699078 | MS.gene049472:CDS | 40.0% |
| !! | AGAACCTTTAGGGCAATAGT+TGG | + | chr3.2:56698598-56698617 | None:intergenic | 40.0% |
| !! | GACCATTCTGGAACAAACAA+CGG | - | chr3.2:56699208-56699227 | MS.gene049472:CDS | 40.0% |
| !! | GCATCAGTTAAGTGATGGAT+TGG | + | chr3.2:56699000-56699019 | None:intergenic | 40.0% |
| !! | GTGGTTGCTGCTTTATGTTT+GGG | - | chr3.2:56696332-56696351 | MS.gene049472:CDS | 40.0% |
| !! | TAGGGCAATAGTTGGTGATA+TGG | + | chr3.2:56698590-56698609 | None:intergenic | 40.0% |
| !! | TGGTTGCTGCTTTATGTTTG+GGG | - | chr3.2:56696333-56696352 | MS.gene049472:CDS | 40.0% |
| !! | TGTGGTTGCTGCTTTATGTT+TGG | - | chr3.2:56696331-56696350 | MS.gene049472:CDS | 40.0% |
| AACGTCGTTAACATGACCAG+TGG | + | chr3.2:56696739-56696758 | None:intergenic | 45.0% | |
| AATACCACTTGAACCTGGAC+TGG | + | chr3.2:56696363-56696382 | None:intergenic | 45.0% | |
| AATAGTAGGTGCAAGTGGAG+GGG | - | chr3.2:56698764-56698783 | MS.gene049472:intron | 45.0% | |
| ACATTATTCCGGAACAGCAG+AGG | - | chr3.2:56698790-56698809 | MS.gene049472:intron | 45.0% | |
| AGTCCAGGTTCAAGTGGTAT+TGG | - | chr3.2:56696362-56696381 | MS.gene049472:CDS | 45.0% | |
| CAACTTACCAGCATCGTTAC+AGG | + | chr3.2:56697571-56697590 | None:intergenic | 45.0% | |
| CAATAGTAGGTGCAAGTGGA+GGG | - | chr3.2:56698763-56698782 | MS.gene049472:intron | 45.0% | |
| CAATTTGTCTATGGACCCCA+AGG | + | chr3.2:56698162-56698181 | None:intergenic | 45.0% | |
| CACCGTTGTTTGTTCCAGAA+TGG | + | chr3.2:56699213-56699232 | None:intergenic | 45.0% | |
| CATGTCCTAAAACCCTTTGC+TGG | - | chr3.2:56699148-56699167 | MS.gene049472:CDS | 45.0% | |
| CCAATTGCATGCATTCGCAA+CGG | + | chr3.2:56697993-56698012 | None:intergenic | 45.0% | |
| CGAATGCATGCAATTGGTGA+TGG | - | chr3.2:56697996-56698015 | MS.gene049472:intron | 45.0% | |
| CTACGAGCAATTATCTCAGC+AGG | + | chr3.2:56697192-56697211 | None:intergenic | 45.0% | |
| CTGTAACGATGCTGGTAAGT+TGG | - | chr3.2:56697569-56697588 | MS.gene049472:intron | 45.0% | |
| GAAGGAAAACCACCCTTTCT+CGG | + | chr3.2:56699262-56699281 | None:intergenic | 45.0% | |
| GAGATCTGGACAACTCCATA+TGG | - | chr3.2:56699073-56699092 | MS.gene049472:CDS | 45.0% | |
| GCTGAGATAATTGCTCGTAG+AGG | - | chr3.2:56697192-56697211 | MS.gene049472:CDS | 45.0% | |
| GGGATGGATGTTATCCATGA+AGG | - | chr3.2:56696287-56696306 | MS.gene049472:CDS | 45.0% | |
| GGTCCAAATGCTTTCTATGG+TGG | - | chr3.2:56697384-56697403 | MS.gene049472:intron | 45.0% | |
| GTTAGCTAATGGTGCAGCAA+AGG | - | chr3.2:56696409-56696428 | MS.gene049472:intron | 45.0% | |
| TCCTAAAACCCTTTGCTGGT+GGG | - | chr3.2:56699152-56699171 | MS.gene049472:CDS | 45.0% | |
| TGGAGGGGCAAACATTATTC+CGG | - | chr3.2:56698779-56698798 | MS.gene049472:intron | 45.0% | |
| TGGGGTCCATAGACAAATTG+AGG | - | chr3.2:56698162-56698181 | MS.gene049472:CDS | 45.0% | |
| TGGTCTAGCAATAGCAGTTC+CGG | - | chr3.2:56697098-56697117 | MS.gene049472:CDS | 45.0% | |
| TGTTCAGCAGCTGTAACACA+AGG | + | chr3.2:56698099-56698118 | None:intergenic | 45.0% | |
| ! | AGAAAGGGTGGTTTTCCTTC+AGG | - | chr3.2:56699262-56699281 | MS.gene049472:CDS | 45.0% |
| ! | ATTTTTCCATCTGATCGCGG+AGG | + | chr3.2:56697236-56697255 | None:intergenic | 45.0% |
| ! | CTTAAAAGCACGAAGAGGAG+CGG | + | chr3.2:56696453-56696472 | None:intergenic | 45.0% |
| !! | AGAACTTGCTGGCTTTCACA+TGG | - | chr3.2:56697122-56697141 | MS.gene049472:intron | 45.0% |
| !! | CCATTGCTCTAAAATCGGGA+TGG | - | chr3.2:56696271-56696290 | MS.gene049472:CDS | 45.0% |
| !! | GAAGCCGTTTTATGCTGTCA+CGG | - | chr3.2:56698841-56698860 | MS.gene049472:intron | 45.0% |
| !! | GATGATAATGGTCTCTTCCC+TGG | + | chr3.2:56698568-56698587 | None:intergenic | 45.0% |
| !! | GGTCCACCATAGAAAGCATT+TGG | + | chr3.2:56697390-56697409 | None:intergenic | 45.0% |
| !! | GGTTGCTGCTTTATGTTTGG+GGG | - | chr3.2:56696334-56696353 | MS.gene049472:CDS | 45.0% |
| !! | GTCCGCCATTGCTCTAAAAT+CGG | - | chr3.2:56696266-56696285 | MS.gene049472:CDS | 45.0% |
| !! | TACAAGTGTTGGTGTCGTGT+CGG | + | chr3.2:56696833-56696852 | None:intergenic | 45.0% |
| !! | TCCGCCATTGCTCTAAAATC+GGG | - | chr3.2:56696267-56696286 | MS.gene049472:CDS | 45.0% |
| !! | TGCATGCAATTGGTGATGGT+AGG | - | chr3.2:56698000-56698019 | MS.gene049472:intron | 45.0% |
| !! | TTTAGAGCAATGGCGGACAT+CGG | + | chr3.2:56696264-56696283 | None:intergenic | 45.0% |
| !!! | AGCTGGTGGTGGAACATTTT+TGG | + | chr3.2:56698527-56698546 | None:intergenic | 45.0% |
| !!! | CAGCAAAGGGTTTTAGGACA+TGG | + | chr3.2:56699150-56699169 | None:intergenic | 45.0% |
| !!! | CCATCCCGATTTTAGAGCAA+TGG | + | chr3.2:56696274-56696293 | None:intergenic | 45.0% |
| !!! | TCCCGATTTTAGAGCAATGG+CGG | + | chr3.2:56696271-56696290 | None:intergenic | 45.0% |
| ACACAAACACCGGATACGAC+AGG | + | chr3.2:56696920-56696939 | None:intergenic | 50.0% | |
| ACGGATACGGACACAAACAC+CGG | + | chr3.2:56696930-56696949 | None:intergenic | 50.0% | |
| ATCGTCTGATCTCGATCCAG+TGG | + | chr3.2:56697885-56697904 | None:intergenic | 50.0% | |
| ATCGTTACAGGTCCACCTGA+AGG | + | chr3.2:56697559-56697578 | None:intergenic | 50.0% | |
| CAAATTGCCCCACCAGCAAA+GGG | + | chr3.2:56699163-56699182 | None:intergenic | 50.0% | |
| CACAAACACCGGATACGACA+GGG | + | chr3.2:56696919-56696938 | None:intergenic | 50.0% | |
| CACATGGCGTGGAAACAACA+TGG | - | chr3.2:56697138-56697157 | MS.gene049472:intron | 50.0% | |
| CCACCAATACCACTTGAACC+TGG | + | chr3.2:56696368-56696387 | None:intergenic | 50.0% | |
| CCGTTGCGAATGCATGCAAT+TGG | - | chr3.2:56697990-56698009 | MS.gene049472:intron | 50.0% | |
| CCTAAAACCCTTTGCTGGTG+GGG | - | chr3.2:56699153-56699172 | MS.gene049472:CDS | 50.0% | |
| CGCAATGCTCGACCAAACTT+GGG | + | chr3.2:56698274-56698293 | None:intergenic | 50.0% | |
| CGTTAGCGACCTATGAAGCA+CGG | - | chr3.2:56696755-56696774 | MS.gene049472:intron | 50.0% | |
| CTAAGTATGCCTCCTCCTTC+AGG | - | chr3.2:56697541-56697560 | MS.gene049472:intron | 50.0% | |
| GCAATAGTAGGTGCAAGTGG+AGG | - | chr3.2:56698762-56698781 | MS.gene049472:intron | 50.0% | |
| GCAGTCAGTGATCCGAGAAA+GGG | - | chr3.2:56699247-56699266 | MS.gene049472:CDS | 50.0% | |
| GGAGCCGTGACAGCATAAAA+CGG | + | chr3.2:56698848-56698867 | None:intergenic | 50.0% | |
| GGCTCCAAGGTTCTATCATC+AGG | - | chr3.2:56698862-56698881 | MS.gene049472:intron | 50.0% | |
| GGTCTAGCAATAGCAGTTCC+GGG | - | chr3.2:56697099-56697118 | MS.gene049472:CDS | 50.0% | |
| GTCCTAAAACCCTTTGCTGG+TGG | - | chr3.2:56699151-56699170 | MS.gene049472:CDS | 50.0% | |
| TCAACATAAGTGGACGCCAC+TGG | - | chr3.2:56697866-56697885 | MS.gene049472:CDS | 50.0% | |
| TCGCAATGCTCGACCAAACT+TGG | + | chr3.2:56698275-56698294 | None:intergenic | 50.0% | |
| TGAAAGCCAGCAAGTTCTCC+CGG | + | chr3.2:56697120-56697139 | None:intergenic | 50.0% | |
| TTTATGCTGTCACGGCTCCA+AGG | - | chr3.2:56698849-56698868 | MS.gene049472:intron | 50.0% | |
| ! | CCAGGTTCAAGTGGTATTGG+TGG | - | chr3.2:56696365-56696384 | MS.gene049472:CDS | 50.0% |
| ! | CGCTCCTCTTCGTGCTTTTA+AGG | - | chr3.2:56696451-56696470 | MS.gene049472:intron | 50.0% |
| ! | CTGAAGGAGGAGGCATACTT+AGG | + | chr3.2:56697543-56697562 | None:intergenic | 50.0% |
| ! | TTTGGTCGAGCATTGCGAAG+AGG | - | chr3.2:56698277-56698296 | MS.gene049472:CDS | 50.0% |
| !! | GCTTTCTATGGTGGACCGAT+TGG | - | chr3.2:56697393-56697412 | MS.gene049472:intron | 50.0% |
| !! | GGTTCAAGTGGTATTGGTGG+TGG | - | chr3.2:56696368-56696387 | MS.gene049472:CDS | 50.0% |
| ACAAAGTTGGCAGGAGCTGG+TGG | + | chr3.2:56698541-56698560 | None:intergenic | 55.0% | |
| ACACGACACGTGTCTGACAC+CGG | + | chr3.2:56696804-56696823 | None:intergenic | 55.0% | |
| AGGTGGACCTGTAACGATGC+TGG | - | chr3.2:56697561-56697580 | MS.gene049472:intron | 55.0% | |
| AGTATGCCTCCTCCTTCAGG+TGG | - | chr3.2:56697544-56697563 | MS.gene049472:intron | 55.0% | |
| CGCAACGGTGACTAGACTGT+TGG | + | chr3.2:56697978-56697997 | None:intergenic | 55.0% | |
| CGGAGTGTGTTTGCACCACA+TGG | - | chr3.2:56697288-56697307 | MS.gene049472:CDS | 55.0% | |
| GCAAATTGCCCCACCAGCAA+AGG | + | chr3.2:56699164-56699183 | None:intergenic | 55.0% | |
| GGCAGTCAGTGATCCGAGAA+AGG | - | chr3.2:56699246-56699265 | MS.gene049472:CDS | 55.0% | |
| GGCTTTACAAGTCTCGCCCA+TGG | + | chr3.2:56697171-56697190 | None:intergenic | 55.0% | |
| GTCAGTGATCCGAGAAAGGG+TGG | - | chr3.2:56699250-56699269 | MS.gene049472:CDS | 55.0% | |
| GTCAGTGTCCCTGTCGTATC+CGG | - | chr3.2:56696908-56696927 | MS.gene049472:CDS | 55.0% | |
| GTTACAGGTCCACCTGAAGG+AGG | + | chr3.2:56697556-56697575 | None:intergenic | 55.0% | |
| GTTGCCAGTCCAGGTTCAAG+TGG | - | chr3.2:56696356-56696375 | MS.gene049472:CDS | 55.0% | |
| ! | CCCCACCAGCAAAGGGTTTT+AGG | + | chr3.2:56699156-56699175 | None:intergenic | 55.0% |
| !! | GAGGAGTGTCCGTGCTTCAT+AGG | + | chr3.2:56696767-56696786 | None:intergenic | 55.0% |
| !! | TCCTCGCGTTAGGAGTGTTC+CGG | - | chr3.2:56696782-56696801 | MS.gene049472:intron | 55.0% |
| !! | TGTTGGTGTCGTGTCGGTGT+CGG | + | chr3.2:56696827-56696846 | None:intergenic | 55.0% |
| !! | TTGCTGGCTTTCACATGGCG+TGG | - | chr3.2:56697127-56697146 | MS.gene049472:intron | 55.0% |
| AAGTTGGCAGGAGCTGGTGG+TGG | + | chr3.2:56698538-56698557 | None:intergenic | 60.0% | |
| ACAGGTCCACCTGAAGGAGG+AGG | + | chr3.2:56697553-56697572 | None:intergenic | 60.0% | |
| ACCGGAACACTCCTAACGCG+AGG | + | chr3.2:56696786-56696805 | None:intergenic | 60.0% | |
| CCACAGCTGCATCCACTGCA+TGG | + | chr3.2:56696316-56696335 | None:intergenic | 60.0% | |
| CCATGCAGTGGATGCAGCTG+TGG | - | chr3.2:56696313-56696332 | MS.gene049472:CDS | 60.0% | |
| CTGCCAACTTTGTCGCGCCA+GGG | - | chr3.2:56698548-56698567 | MS.gene049472:intron | 60.0% | |
| CTTCCCTGGCGCGACAAAGT+TGG | + | chr3.2:56698554-56698573 | None:intergenic | 60.0% | |
| GAAGCTCCTCCGCGATCAGA+TGG | - | chr3.2:56697227-56697246 | MS.gene049472:CDS | 60.0% | |
| GCAGTTCCGGGAGAACTTGC+TGG | - | chr3.2:56697111-56697130 | MS.gene049472:intron | 60.0% | |
| GCGACAAAGTTGGCAGGAGC+TGG | + | chr3.2:56698544-56698563 | None:intergenic | 60.0% | |
| GGACATGGCCCCTGCTTCTA+AGG | + | chr3.2:56699135-56699154 | None:intergenic | 60.0% | |
| TGTTTGGGGGTTGCCAGTCC+AGG | - | chr3.2:56696347-56696366 | MS.gene049472:CDS | 60.0% | |
| ! | AGACCTTTCTGGCGCCCTTG+GGG | - | chr3.2:56698144-56698163 | MS.gene049472:CDS | 60.0% |
| ! | AGGGCGCCAGAAAGGTCTGA+AGG | + | chr3.2:56698142-56698161 | None:intergenic | 60.0% |
| ! | CAGACCTTTCTGGCGCCCTT+GGG | - | chr3.2:56698143-56698162 | MS.gene049472:CDS | 60.0% |
| ! | TCAGACCTTTCTGGCGCCCT+TGG | - | chr3.2:56698142-56698161 | MS.gene049472:CDS | 60.0% |
| !! | AGAGCAATGGCGGACATCGG+TGG | + | chr3.2:56696261-56696280 | None:intergenic | 60.0% |
| CCACTGCATGGCCCCCTTCA+TGG | + | chr3.2:56696304-56696323 | None:intergenic | 65.0% | |
| CCATGAAGGGGGCCATGCAG+TGG | - | chr3.2:56696301-56696320 | MS.gene049472:CDS | 65.0% | |
| CCTGCCAACTTTGTCGCGCC+AGG | - | chr3.2:56698547-56698566 | MS.gene049472:intron | 65.0% | |
| CCTGGCGCGACAAAGTTGGC+AGG | + | chr3.2:56698550-56698569 | None:intergenic | 65.0% | |
| GCACGGACACTCCTCGCGTT+AGG | - | chr3.2:56696772-56696791 | MS.gene049472:intron | 65.0% | |
| !! | GGACCCCAAGGGCGCCAGAA+AGG | + | chr3.2:56698150-56698169 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 56696155 | 56699291 | 56696155 | ID=MS.gene049472 |
| chr3.2 | mRNA | 56696155 | 56699291 | 56696155 | ID=MS.gene049472.t1;Parent=MS.gene049472 |
| chr3.2 | exon | 56698974 | 56699291 | 56698974 | ID=MS.gene049472.t1.exon1;Parent=MS.gene049472.t1 |
| chr3.2 | CDS | 56698974 | 56699291 | 56698974 | ID=cds.MS.gene049472.t1;Parent=MS.gene049472.t1 |
| chr3.2 | exon | 56698044 | 56698386 | 56698044 | ID=MS.gene049472.t1.exon2;Parent=MS.gene049472.t1 |
| chr3.2 | CDS | 56698044 | 56698386 | 56698044 | ID=cds.MS.gene049472.t1;Parent=MS.gene049472.t1 |
| chr3.2 | exon | 56697864 | 56697985 | 56697864 | ID=MS.gene049472.t1.exon3;Parent=MS.gene049472.t1 |
| chr3.2 | CDS | 56697864 | 56697985 | 56697864 | ID=cds.MS.gene049472.t1;Parent=MS.gene049472.t1 |
| chr3.2 | exon | 56697171 | 56697337 | 56697171 | ID=MS.gene049472.t1.exon4;Parent=MS.gene049472.t1 |
| chr3.2 | CDS | 56697171 | 56697337 | 56697171 | ID=cds.MS.gene049472.t1;Parent=MS.gene049472.t1 |
| chr3.2 | exon | 56696834 | 56697122 | 56696834 | ID=MS.gene049472.t1.exon5;Parent=MS.gene049472.t1 |
| chr3.2 | CDS | 56696834 | 56697122 | 56696834 | ID=cds.MS.gene049472.t1;Parent=MS.gene049472.t1 |
| chr3.2 | exon | 56696563 | 56696667 | 56696563 | ID=MS.gene049472.t1.exon6;Parent=MS.gene049472.t1 |
| chr3.2 | CDS | 56696563 | 56696667 | 56696563 | ID=cds.MS.gene049472.t1;Parent=MS.gene049472.t1 |
| chr3.2 | exon | 56696155 | 56696397 | 56696155 | ID=MS.gene049472.t1.exon7;Parent=MS.gene049472.t1 |
| chr3.2 | CDS | 56696155 | 56696397 | 56696155 | ID=cds.MS.gene049472.t1;Parent=MS.gene049472.t1 |
| Gene Sequence |
| Protein sequence |
