Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008569.t1 | KEH34407.1 | 90.7 | 572 | 31 | 1 | 1 | 550 | 6 | 577 | 2.80E-295 | 1023.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008569.t1 | Q680I5 | 57.9 | 573 | 210 | 6 | 2 | 549 | 11 | 577 | 3.0e-184 | 646.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008569.t1 | A0A072UXY0 | 90.7 | 572 | 31 | 1 | 1 | 550 | 6 | 577 | 2.1e-295 | 1023.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene81622 | MS.gene008569 | PPI |
| MS.gene008569 | MS.gene049472 | PPI |
| MS.gene008569 | MS.gene81617 | PPI |
| MS.gene008569 | MS.gene045074 | PPI |
| MS.gene75436 | MS.gene008569 | PPI |
| MS.gene016743 | MS.gene008569 | PPI |
| MS.gene008569 | MS.gene37911 | PPI |
| MS.gene008569 | MS.gene070503 | PPI |
| MS.gene008569 | MS.gene81620 | PPI |
| MS.gene008569 | MS.gene75436 | PPI |
| MS.gene008569 | MS.gene016758 | PPI |
| MS.gene008569 | MS.gene013831 | PPI |
| MS.gene070505 | MS.gene008569 | PPI |
| MS.gene057886 | MS.gene008569 | PPI |
| MS.gene008569 | MS.gene070511 | PPI |
| MS.gene008569 | MS.gene064527 | PPI |
| MS.gene008569 | MS.gene070507 | PPI |
| MS.gene008569 | MS.gene057884 | PPI |
| MS.gene008569 | MS.gene75036 | PPI |
| MS.gene008569 | MS.gene057883 | PPI |
| MS.gene008569 | MS.gene013833 | PPI |
| MS.gene008569 | MS.gene070492 | PPI |
| MS.gene008569 | MS.gene070510 | PPI |
| MS.gene81615 | MS.gene008569 | PPI |
| MS.gene008569 | MS.gene38520 | PPI |
| MS.gene008569 | MS.gene41579 | PPI |
| MS.gene66373 | MS.gene008569 | PPI |
| MS.gene008569 | MS.gene030326 | PPI |
| MS.gene008569 | MS.gene070509 | PPI |
| MS.gene008569 | MS.gene67840 | PPI |
| MS.gene016742 | MS.gene008569 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008569.t1 | MTR_3g466000 | 90.536 | 560 | 31 | 1 | 13 | 550 | 18 | 577 | 0.0 | 985 |
| MS.gene008569.t1 | MTR_3g087950 | 71.728 | 573 | 136 | 3 | 4 | 550 | 10 | 582 | 0.0 | 803 |
| MS.gene008569.t1 | MTR_6g090280 | 48.057 | 566 | 256 | 6 | 22 | 550 | 59 | 623 | 3.73e-166 | 486 |
| MS.gene008569.t1 | MTR_6g090280 | 46.849 | 476 | 219 | 4 | 108 | 550 | 1 | 475 | 2.18e-146 | 430 |
| MS.gene008569.t1 | MTR_6g090280 | 49.070 | 430 | 191 | 5 | 22 | 424 | 59 | 487 | 4.44e-126 | 379 |
| MS.gene008569.t1 | MTR_5g084180 | 72.816 | 103 | 26 | 2 | 6 | 106 | 20 | 122 | 1.93e-24 | 99.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008569.t1 | AT4G39640 | 59.402 | 569 | 200 | 6 | 5 | 549 | 10 | 571 | 0.0 | 675 |
| MS.gene008569.t1 | AT4G39640 | 59.402 | 569 | 200 | 6 | 5 | 549 | 10 | 571 | 0.0 | 675 |
| MS.gene008569.t1 | AT4G39650 | 57.941 | 573 | 210 | 6 | 2 | 549 | 11 | 577 | 0.0 | 649 |
| MS.gene008569.t1 | AT4G29210 | 47.527 | 566 | 257 | 8 | 24 | 550 | 73 | 637 | 2.70e-174 | 507 |
| MS.gene008569.t1 | AT4G29210 | 47.887 | 426 | 196 | 6 | 24 | 424 | 73 | 497 | 1.35e-134 | 401 |
| MS.gene008569.t1 | AT1G69820 | 61.468 | 218 | 61 | 2 | 277 | 471 | 2 | 219 | 1.18e-87 | 270 |
Find 147 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTTCCTTCAGACCTTTC+TGG | 0.189248 | 3.3:-54046227 | MS.gene008569:CDS |
| ATTTCCACTGCTTCCATAAA+TGG | 0.190298 | 3.3:-54047785 | MS.gene008569:CDS |
| GCTTTCTATGGTGGACTAAT+TGG | 0.194098 | 3.3:-54046607 | MS.gene008569:CDS |
| GTGGCTGCTGCTCTTTGTTT+GGG | 0.210215 | 3.3:-54047641 | MS.gene008569:CDS |
| GTGGAGCCTTTATGCTTCTT+AGG | 0.221391 | 3.3:-54047586 | MS.gene008569:CDS |
| AATTGCTCGTAGAGGGTTTA+AGG | 0.223403 | 3.3:-54046800 | MS.gene008569:CDS |
| TGTGGCTGCTGCTCTTTGTT+TGG | 0.247120 | 3.3:-54047642 | MS.gene008569:CDS |
| TCTATAGATATAGGTTTCTT+TGG | 0.255080 | 3.3:+54046508 | None:intergenic |
| TAATTGCCTCAATTTGTCTA+TGG | 0.279157 | 3.3:+54046192 | None:intergenic |
| GGACATGACCCCTGCTTCTA+AGG | 0.294409 | 3.3:+54045277 | None:intergenic |
| CCTTAGTATGCCTCCTCCTT+CGG | 0.298404 | 3.3:-54046467 | MS.gene008569:CDS |
| ATAGAAACCTCTGCTGTTCC+TGG | 0.316097 | 3.3:+54045595 | None:intergenic |
| AAACGTGGAAAGAACCTTTA+GGG | 0.328668 | 3.3:+54045756 | None:intergenic |
| TATGGTCCAAATGCTTTCTA+TGG | 0.336198 | 3.3:-54046619 | MS.gene008569:CDS |
| CAGACCTTTCTGGCGCCCTC+GGG | 0.346521 | 3.3:-54046217 | MS.gene008569:CDS |
| CTAGTGATATTTACAAAATC+AGG | 0.348284 | 3.3:+54046134 | None:intergenic |
| TGGTCTAGCAATAGCAGTTC+CGG | 0.349888 | 3.3:-54046902 | MS.gene008569:CDS |
| ACAAACGTTTCTGACCATTC+TGG | 0.353306 | 3.3:-54045213 | MS.gene008569:CDS |
| GTCCGCAATTGCTCTAATAT+CGG | 0.354147 | 3.3:-54047707 | MS.gene008569:CDS |
| TCAGACCTTTCTGGCGCCCT+CGG | 0.355352 | 3.3:-54046218 | MS.gene008569:CDS |
| TTCAATATTATTCCAGTACT+TGG | 0.359758 | 3.3:+54045901 | None:intergenic |
| TTTCGCAGCTAATACCAAAC+TGG | 0.359857 | 3.3:-54045368 | MS.gene008569:intron |
| CTAAGAGTAATTTCTAAATA+TGG | 0.362243 | 3.3:-54046637 | MS.gene008569:CDS |
| CTTAGTATGCCTCCTCCTTC+GGG | 0.362650 | 3.3:-54046466 | MS.gene008569:CDS |
| TAGGGCAATAGTTGGTGATA+TGG | 0.367941 | 3.3:+54045774 | None:intergenic |
| AAACGTTTGTAACGATAAAC+TGG | 0.376072 | 3.3:+54045226 | None:intergenic |
| CCAAGAAAATCTATAGATAT+AGG | 0.377085 | 3.3:+54046499 | None:intergenic |
| AGTCCACCATAGAAAGCATT+TGG | 0.379482 | 3.3:+54046613 | None:intergenic |
| CCTGCCAACTTCGTCGCGCC+AGG | 0.395506 | 3.3:-54045814 | MS.gene008569:CDS |
| GGAGCCGTGACAGCAGAAAA+TGG | 0.397966 | 3.3:+54045547 | None:intergenic |
| CATGTCCTAAAACCCTTTGC+TGG | 0.400286 | 3.3:-54045261 | MS.gene008569:CDS |
| TTCTCATAACTAACCCAGTT+TGG | 0.401963 | 3.3:+54045354 | None:intergenic |
| TTCGCAATGCTCGACAAACT+TGG | 0.403540 | 3.3:+54046088 | None:intergenic |
| TCTAAGGAATTCTCTGATAT+CGG | 0.406374 | 3.3:+54045293 | None:intergenic |
| CAACTTACCAGCATCGTTGC+AGG | 0.409413 | 3.3:+54046439 | None:intergenic |
| GCAGTTCCGGGAGAACTTGC+TGG | 0.413064 | 3.3:-54046889 | MS.gene008569:CDS |
| GGAGGGGCTAACATTATTCC+AGG | 0.414651 | 3.3:-54045613 | MS.gene008569:CDS |
| TCTGGAATAAACAATGGTAT+TGG | 0.414944 | 3.3:-54045195 | MS.gene008569:CDS |
| AGCTAACCTAAGAAGCATAA+AGG | 0.415679 | 3.3:+54047580 | None:intergenic |
| AAGTACCTTTCGCCAAGTAC+TGG | 0.424772 | 3.3:-54045913 | MS.gene008569:CDS |
| ATGCTTCTTAGGTTAGCTAA+TGG | 0.427061 | 3.3:-54047575 | MS.gene008569:CDS |
| TATACCTGATGATAGAATCT+TGG | 0.450816 | 3.3:+54045526 | None:intergenic |
| ACTGGGTTAGTTATGAGAAC+TGG | 0.452963 | 3.3:-54045350 | MS.gene008569:CDS |
| TACCATTGTTTATTCCAGAA+TGG | 0.453919 | 3.3:+54045199 | None:intergenic |
| AAAGATGTTCAGAAGGCTAA+AGG | 0.454055 | 3.3:-54046571 | MS.gene008569:CDS |
| CTTCCCTGGCGCGACGAAGT+TGG | 0.460991 | 3.3:+54045810 | None:intergenic |
| CAGAAAATGGCTTCATTCCA+TGG | 0.461137 | 3.3:+54045560 | None:intergenic |
| TGGCTGCTGCTCTTTGTTTG+GGG | 0.461805 | 3.3:-54047640 | MS.gene008569:CDS |
| ATCACCAACTATTGCCCTAA+AGG | 0.461822 | 3.3:-54045770 | MS.gene008569:intron |
| AACAACATGGTAAGCTTCCA+TGG | 0.466710 | 3.3:-54046849 | MS.gene008569:CDS |
| AGTCCAGGTTCAAGTGGTAT+TGG | 0.471417 | 3.3:-54047611 | MS.gene008569:CDS |
| TCCTAAAACCCTTTGCTGGT+GGG | 0.471834 | 3.3:-54045257 | MS.gene008569:CDS |
| AATACTACTTTGAAGTCAAT+AGG | 0.472553 | 3.3:-54046925 | MS.gene008569:CDS |
| GAACATCTTTAACTAGATTG+AGG | 0.476087 | 3.3:+54046584 | None:intergenic |
| CCTAAAACCCTTTGCTGGTG+GGG | 0.481001 | 3.3:-54045256 | MS.gene008569:CDS |
| GAAGCTCCTCCGCGATCAGA+TGG | 0.484080 | 3.3:-54046773 | MS.gene008569:CDS |
| GTCCTAAAACCCTTTGCTGG+TGG | 0.484388 | 3.3:-54045258 | MS.gene008569:CDS |
| TCAGAGAATTCCTTAGAAGC+AGG | 0.485113 | 3.3:-54045287 | MS.gene008569:CDS |
| GGTTCAAGTGGTATTGGTGG+TGG | 0.486626 | 3.3:-54047605 | MS.gene008569:CDS |
| CCAGGTTCAAGTGGTATTGG+TGG | 0.488566 | 3.3:-54047608 | MS.gene008569:CDS |
| AGTTCAAAGTGGTCACCATA+TGG | 0.489478 | 3.3:+54045321 | None:intergenic |
| GGACCCCGAGGGCGCCAGAA+AGG | 0.491999 | 3.3:+54046213 | None:intergenic |
| GGTCTAGCAATAGCAGTTCC+GGG | 0.493839 | 3.3:-54046901 | MS.gene008569:CDS |
| TCCGCAATTGCTCTAATATC+GGG | 0.495456 | 3.3:-54047706 | MS.gene008569:CDS |
| GGCTCCAAGATTCTATCATC+AGG | 0.496268 | 3.3:-54045530 | MS.gene008569:intron |
| CCACCAATACCACTTGAACC+TGG | 0.498702 | 3.3:+54047608 | None:intergenic |
| CTACGAGCAATTATCTCAGC+AGG | 0.499103 | 3.3:+54046811 | None:intergenic |
| GCATATTGCCCCACCAGCAA+AGG | 0.499352 | 3.3:+54045248 | None:intergenic |
| CCTGGCGCGACGAAGTTGGC+AGG | 0.500307 | 3.3:+54045814 | None:intergenic |
| GCGACGAAGTTGGCAGGAGC+TGG | 0.501550 | 3.3:+54045820 | None:intergenic |
| TGGAATCAAATCAATGATCA+TGG | 0.503573 | 3.3:-54046015 | MS.gene008569:CDS |
| GTTGGTGATATGGATGATAA+TGG | 0.505734 | 3.3:+54045784 | None:intergenic |
| AAGATGTTCAGAAGGCTAAA+GGG | 0.506670 | 3.3:-54046570 | MS.gene008569:CDS |
| GGCTAAAGGGATATTAACCT+TGG | 0.510233 | 3.3:-54046557 | MS.gene008569:CDS |
| CATGGAAAACTCTTGAAAGT+AGG | 0.512425 | 3.3:-54046694 | MS.gene008569:CDS |
| GGCTGCTGCTCTTTGTTTGG+GGG | 0.512882 | 3.3:-54047639 | MS.gene008569:CDS |
| GGGTGGACCTGCAACGATGC+TGG | 0.513300 | 3.3:-54046446 | MS.gene008569:intron |
| GATGATAATGGTCTCTTCCC+TGG | 0.515652 | 3.3:+54045796 | None:intergenic |
| AGAACCTTTAGGGCAATAGT+TGG | 0.517554 | 3.3:+54045766 | None:intergenic |
| GAGAACTGGACAACTCCATA+TGG | 0.519179 | 3.3:-54045336 | MS.gene008569:CDS |
| GGATGGATGTTATCCGTGAA+GGG | 0.520289 | 3.3:-54047685 | MS.gene008569:CDS |
| TCTATGAATCACTTTGTCCA+TGG | 0.521236 | 3.3:-54045577 | MS.gene008569:CDS |
| CCGAAGGAGGAGGCATACTA+AGG | 0.522435 | 3.3:+54046467 | None:intergenic |
| GGAGAAGTGAAAGCAATAGT+AGG | 0.525123 | 3.3:-54045643 | MS.gene008569:CDS |
| TATGCTATGAGAATGAATCT+TGG | 0.525741 | 3.3:-54046161 | MS.gene008569:CDS |
| AGGAATTCTCTGATATCGGC+AGG | 0.530497 | 3.3:+54045297 | None:intergenic |
| CTGAGATAATTGCTCGTAGA+GGG | 0.531028 | 3.3:-54046807 | MS.gene008569:CDS |
| TCGCAATGCTCGACAAACTT+GGG | 0.531431 | 3.3:+54046089 | None:intergenic |
| CATATTGCCCCACCAGCAAA+GGG | 0.532237 | 3.3:+54045249 | None:intergenic |
| GGCATTTATGGTACACGTCA+AGG | 0.532311 | 3.3:+54045948 | None:intergenic |
| CAATAGTAGGTGCAAGTGGA+GGG | 0.532804 | 3.3:-54045630 | MS.gene008569:CDS |
| CTGTCCATTTATGGAAGCAG+TGG | 0.535441 | 3.3:+54047781 | None:intergenic |
| GGTCCAAATGCTTTCTATGG+TGG | 0.538686 | 3.3:-54046616 | MS.gene008569:CDS |
| GCGGTCAGTGATCCGAGAAA+AGG | 0.539254 | 3.3:-54045162 | MS.gene008569:CDS |
| AATACCACTTGAACCTGGAC+TGG | 0.543182 | 3.3:+54047613 | None:intergenic |
| AAGTTGGCAGGAGCTGGTGG+TGG | 0.543678 | 3.3:+54045826 | None:intergenic |
| CGGGGTCCATAGACAAATTG+AGG | 0.545580 | 3.3:-54046198 | MS.gene008569:CDS |
| GCAGGTCCACCCGAAGGAGG+AGG | 0.546576 | 3.3:+54046457 | None:intergenic |
| CAATGGTATTGGAAAGATTG+TGG | 0.547343 | 3.3:-54045184 | MS.gene008569:CDS |
| TTCGCAGCTAATACCAAACT+GGG | 0.547751 | 3.3:-54045367 | MS.gene008569:intron |
| CTGCCAACTTCGTCGCGCCA+GGG | 0.552951 | 3.3:-54045813 | MS.gene008569:CDS |
| TGAAGGCCAGCAAGTTCTCC+CGG | 0.555393 | 3.3:+54046883 | None:intergenic |
| GGCTTTACAAGTCTCGCCCA+TGG | 0.557354 | 3.3:+54046832 | None:intergenic |
| GTTGTTTCCACGCCATGTGA+AGG | 0.557616 | 3.3:+54046866 | None:intergenic |
| CGTAGCGTGTTTGCTCCACA+TGG | 0.558643 | 3.3:-54046712 | MS.gene008569:CDS |
| AGAACTTGCTGGCCTTCACA+TGG | 0.561466 | 3.3:-54046878 | MS.gene008569:CDS |
| CAGAGAATTCCTTAGAAGCA+GGG | 0.566196 | 3.3:-54045286 | MS.gene008569:CDS |
| AATAATATTGAACAATGAGA+TGG | 0.567223 | 3.3:-54045890 | MS.gene008569:CDS |
| AGACCTTTCTGGCGCCCTCG+GGG | 0.568662 | 3.3:-54046216 | MS.gene008569:CDS |
| AAAGCAATAGTAGGTGCAAG+TGG | 0.572346 | 3.3:-54045634 | MS.gene008569:CDS |
| TTGCTGGCCTTCACATGGCG+TGG | 0.579240 | 3.3:-54046873 | MS.gene008569:CDS |
| TCTAGTTAAAGATGTTCAGA+AGG | 0.582689 | 3.3:-54046578 | MS.gene008569:CDS |
| TCATCATGGAGCTGTTGCCA+CGG | 0.584107 | 3.3:-54047732 | MS.gene008569:CDS |
| GGGATGGATGTTATCCGTGA+AGG | 0.586871 | 3.3:-54047686 | MS.gene008569:CDS |
| GTTGCCAGTCCAGGTTCAAG+TGG | 0.588058 | 3.3:-54047617 | MS.gene008569:CDS |
| AGCAGTTTCTCTCATATCAA+AGG | 0.589334 | 3.3:+54047541 | None:intergenic |
| TCCCGATATTAGAGCAATTG+CGG | 0.589884 | 3.3:+54047705 | None:intergenic |
| ATCGTTGCAGGTCCACCCGA+AGG | 0.590493 | 3.3:+54046451 | None:intergenic |
| ACGAAGTTGGCAGGAGCTGG+TGG | 0.590607 | 3.3:+54045823 | None:intergenic |
| CACATGGCGTGGAAACAACA+TGG | 0.592237 | 3.3:-54046862 | MS.gene008569:CDS |
| AGGGCGCCAGAAAGGTCTGA+AGG | 0.594981 | 3.3:+54046221 | None:intergenic |
| GCAATAGTAGGTGCAAGTGG+AGG | 0.596054 | 3.3:-54045631 | MS.gene008569:CDS |
| GTCAGTGATCCGAGAAAAGG+TGG | 0.599514 | 3.3:-54045159 | MS.gene008569:CDS |
| TTATTCCAGTACTTGGCGAA+AGG | 0.602336 | 3.3:+54045908 | None:intergenic |
| TCATGCAGTTGACGCAGCTG+TGG | 0.602480 | 3.3:-54047660 | MS.gene008569:CDS |
| GTTAGCTAATGGTGTAGCAA+AGG | 0.604530 | 3.3:-54047564 | MS.gene008569:CDS |
| AATGAAGTAATCGCTCATCA+TGG | 0.608619 | 3.3:-54047746 | MS.gene008569:CDS |
| AGAGCAATTGCGGACATCCG+TGG | 0.618185 | 3.3:+54047715 | None:intergenic |
| AATAGTAGGTGCAAGTGGAG+GGG | 0.618324 | 3.3:-54045629 | MS.gene008569:CDS |
| GAAATGTCTCAAACACCTGA+AGG | 0.619995 | 3.3:+54045132 | None:intergenic |
| ATGGATGTTATCCGTGAAGG+GGG | 0.620251 | 3.3:-54047683 | MS.gene008569:CDS |
| AGTATGCCTCCTCCTTCGGG+TGG | 0.620769 | 3.3:-54046463 | MS.gene008569:CDS |
| GATGGATGTTATCCGTGAAG+GGG | 0.622453 | 3.3:-54047684 | MS.gene008569:CDS |
| CATTATTCCAGGAACAGCAG+AGG | 0.623325 | 3.3:-54045602 | MS.gene008569:CDS |
| GACCATTCTGGAATAAACAA+TGG | 0.623349 | 3.3:-54045201 | MS.gene008569:CDS |
| AGAGAATTCCTTAGAAGCAG+GGG | 0.625923 | 3.3:-54045285 | MS.gene008569:CDS |
| CAATTGCTCTAATATCGGGA+TGG | 0.629868 | 3.3:-54047702 | MS.gene008569:CDS |
| GTTGCAGGTCCACCCGAAGG+AGG | 0.634211 | 3.3:+54046454 | None:intergenic |
| CAATTTGTCTATGGACCCCG+AGG | 0.636178 | 3.3:+54046201 | None:intergenic |
| ACAACATGGTAAGCTTCCAT+GGG | 0.640600 | 3.3:-54046848 | MS.gene008569:CDS |
| TTTACTTTAGAAGCGCGAAG+AGG | 0.649660 | 3.3:+54047518 | None:intergenic |
| ACAGATATAATGAACGACAA+AGG | 0.666346 | 3.3:-54046739 | MS.gene008569:CDS |
| GCTGAGATAATTGCTCGTAG+AGG | 0.669882 | 3.3:-54046808 | MS.gene008569:CDS |
| AATTTGTCTATGGACCCCGA+GGG | 0.694353 | 3.3:+54046202 | None:intergenic |
| ACTACTTTGAAGTCAATAGG+TGG | 0.699074 | 3.3:-54046922 | MS.gene008569:CDS |
| TGGTATTGGAAAGATTGTGG+CGG | 0.719783 | 3.3:-54045181 | MS.gene008569:CDS |
| TATCGGCAGGAAGTTCAAAG+TGG | 0.724685 | 3.3:+54045310 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTAAATAATAATTTAGA+TGG | - | chr3.3:54045516-54045535 | MS.gene008569:intron | 10.0% |
| !!! | TAAACTATTATTTTAAAACG+TGG | + | chr3.3:54047220-54047239 | None:intergenic | 15.0% |
| !!! | TAATTTTCTCAAATTATTAG+CGG | - | chr3.3:54045851-54045870 | MS.gene008569:CDS | 15.0% |
| !! | AATAATATTGAACAATGAGA+TGG | - | chr3.3:54047068-54047087 | MS.gene008569:intron | 20.0% |
| !! | CTAAGAGTAATTTCTAAATA+TGG | - | chr3.3:54046321-54046340 | MS.gene008569:intron | 20.0% |
| !! | TATACAACTTTATATACTTC+AGG | - | chr3.3:54047290-54047309 | MS.gene008569:intron | 20.0% |
| !!! | ATTTAGTGACGAAAATATTT+TGG | - | chr3.3:54045596-54045615 | MS.gene008569:CDS | 20.0% |
| !!! | CTATTTTACAATAAGAAACT+AGG | - | chr3.3:54046291-54046310 | MS.gene008569:intron | 20.0% |
| !!! | TCATTGCATTTTTTAGTAAT+AGG | - | chr3.3:54047472-54047491 | MS.gene008569:intron | 20.0% |
| !!! | TTAACCACTTTAATGTTTTT+TGG | - | chr3.3:54046663-54046682 | MS.gene008569:CDS | 20.0% |
| !!! | TTTTTAGACACATTTTTCAT+AGG | + | chr3.3:54047108-54047127 | None:intergenic | 20.0% |
| ! | ACTTTGAGTACTAATCAATA+TGG | - | chr3.3:54046913-54046932 | MS.gene008569:CDS | 25.0% |
| ! | CCAAGAAAATCTATAGATAT+AGG | + | chr3.3:54046462-54046481 | None:intergenic | 25.0% |
| ! | CTAGTGATATTTACAAAATC+AGG | + | chr3.3:54046827-54046846 | None:intergenic | 25.0% |
| ! | TCTATAGATATAGGTTTCTT+TGG | + | chr3.3:54046453-54046472 | None:intergenic | 25.0% |
| ! | TGCATAATCTTGTTCAAAAT+CGG | - | chr3.3:54045648-54045667 | MS.gene008569:CDS | 25.0% |
| ! | TTCAATATTATTCCAGTACT+TGG | + | chr3.3:54047060-54047079 | None:intergenic | 25.0% |
| !! | CCTATATCTATAGATTTTCT+TGG | - | chr3.3:54046459-54046478 | MS.gene008569:CDS | 25.0% |
| !! | TACAAATTAAAGAGCATGTT+TGG | - | chr3.3:54045688-54045707 | MS.gene008569:intron | 25.0% |
| !!! | AATACTACTTTGAAGTCAAT+AGG | - | chr3.3:54046033-54046052 | MS.gene008569:intron | 25.0% |
| !!! | ATTTTGGTCTTCAATATGAT+CGG | - | chr3.3:54045612-54045631 | MS.gene008569:CDS | 25.0% |
| !!! | TGTTTTTATCTGTCCATTTA+TGG | + | chr3.3:54045189-54045208 | None:intergenic | 25.0% |
| !!! | TTGCATTTTTTAGTAATAGG+AGG | - | chr3.3:54047475-54047494 | MS.gene008569:intron | 25.0% |
| AAACGTTTGTAACGATAAAC+TGG | + | chr3.3:54047735-54047754 | None:intergenic | 30.0% | |
| ACAGATATAATGAACGACAA+AGG | - | chr3.3:54046219-54046238 | MS.gene008569:CDS | 30.0% | |
| AGACCGAAAAATGTGAAATT+CGG | + | chr3.3:54045990-54046009 | None:intergenic | 30.0% | |
| AGCTGCGAAAAATAACTAAA+TGG | + | chr3.3:54047580-54047599 | None:intergenic | 30.0% | |
| CAACTTTATATACTTCAGGA+TGG | - | chr3.3:54047294-54047313 | MS.gene008569:intron | 30.0% | |
| GAACATCTTTAACTAGATTG+AGG | + | chr3.3:54046377-54046396 | None:intergenic | 30.0% | |
| GTTTCTAATCAGTTAAGTGA+TGG | + | chr3.3:54047554-54047573 | None:intergenic | 30.0% | |
| TAATTGCCTCAATTTGTCTA+TGG | + | chr3.3:54046769-54046788 | None:intergenic | 30.0% | |
| TACCATTGTTTATTCCAGAA+TGG | + | chr3.3:54047762-54047781 | None:intergenic | 30.0% | |
| TATACCTGATGATAGAATCT+TGG | + | chr3.3:54047435-54047454 | None:intergenic | 30.0% | |
| TATGCTATGAGAATGAATCT+TGG | - | chr3.3:54046797-54046816 | MS.gene008569:CDS | 30.0% | |
| TCTAAGGAATTCTCTGATAT+CGG | + | chr3.3:54047668-54047687 | None:intergenic | 30.0% | |
| TCTAGTTAAAGATGTTCAGA+AGG | - | chr3.3:54046380-54046399 | MS.gene008569:intron | 30.0% | |
| TGGAATCAAATCAATGATCA+TGG | - | chr3.3:54046943-54046962 | MS.gene008569:CDS | 30.0% | |
| TTCAAACTCGTGTATATCAA+TGG | - | chr3.3:54046592-54046611 | MS.gene008569:CDS | 30.0% | |
| TTCAGTGTAATTACAAGTGT+CGG | + | chr3.3:54045826-54045845 | None:intergenic | 30.0% | |
| TTGAGTACTAATCAATATGG+TGG | - | chr3.3:54046916-54046935 | MS.gene008569:CDS | 30.0% | |
| TTTAGTGACCTAAACGAATT+TGG | - | chr3.3:54045560-54045579 | MS.gene008569:CDS | 30.0% | |
| ! | AAGGTACTTTGAACCAAAAA+AGG | + | chr3.3:54047034-54047053 | None:intergenic | 30.0% |
| ! | ATTAAAGAGCATGTTTGGAA+AGG | - | chr3.3:54045693-54045712 | MS.gene008569:intron | 30.0% |
| ! | GTTTAACAGTGTATCTTTTG+AGG | + | chr3.3:54046431-54046450 | None:intergenic | 30.0% |
| ! | TCATTGATTATTGTCGTAGA+TGG | - | chr3.3:54045481-54045500 | MS.gene008569:intron | 30.0% |
| ! | TCTGGAATAAACAATGGTAT+TGG | - | chr3.3:54047763-54047782 | MS.gene008569:CDS | 30.0% |
| !! | TAATCAGTTAAGTGATGGAT+TGG | + | chr3.3:54047549-54047568 | None:intergenic | 30.0% |
| !! | TGAACCAAAAAAGGCATTTA+TGG | + | chr3.3:54047025-54047044 | None:intergenic | 30.0% |
| !!! | TGTACCATAAATGCCTTTTT+TGG | - | chr3.3:54047018-54047037 | MS.gene008569:intron | 30.0% |
| AAAACGTGGAAAGAACCTTT+AGG | + | chr3.3:54047206-54047225 | None:intergenic | 35.0% | |
| AAACGTGGAAAGAACCTTTA+GGG | + | chr3.3:54047205-54047224 | None:intergenic | 35.0% | |
| AAAGATGTTCAGAAGGCTAA+AGG | - | chr3.3:54046387-54046406 | MS.gene008569:intron | 35.0% | |
| AAGATGTTCAGAAGGCTAAA+GGG | - | chr3.3:54046388-54046407 | MS.gene008569:intron | 35.0% | |
| AATGAAGTAATCGCTCATCA+TGG | - | chr3.3:54045212-54045231 | MS.gene008569:CDS | 35.0% | |
| AGCAGTTTCTCTCATATCAA+AGG | + | chr3.3:54045420-54045439 | None:intergenic | 35.0% | |
| ATTTCCACTGCTTCCATAAA+TGG | - | chr3.3:54045173-54045192 | MS.gene008569:CDS | 35.0% | |
| CATGGAAAACTCTTGAAAGT+AGG | - | chr3.3:54046264-54046283 | MS.gene008569:intron | 35.0% | |
| GAGGACTAAAATCGTTAATC+GGG | - | chr3.3:54047494-54047513 | MS.gene008569:intron | 35.0% | |
| GCTCTATACCAAATTCGTTT+AGG | + | chr3.3:54045571-54045590 | None:intergenic | 35.0% | |
| GGAGGACTAAAATCGTTAAT+CGG | - | chr3.3:54047493-54047512 | MS.gene008569:intron | 35.0% | |
| GGGACCAAAAAACATTAAAG+TGG | + | chr3.3:54046670-54046689 | None:intergenic | 35.0% | |
| TATGGTCCAAATGCTTTCTA+TGG | - | chr3.3:54046339-54046358 | MS.gene008569:intron | 35.0% | |
| TCTATGAATCACTTTGTCCA+TGG | - | chr3.3:54047381-54047400 | MS.gene008569:intron | 35.0% | |
| TCTCAAATTATTAGCGGTGT+CGG | - | chr3.3:54045857-54045876 | MS.gene008569:CDS | 35.0% | |
| TTCTCATAACTAACCCAGTT+TGG | + | chr3.3:54047607-54047626 | None:intergenic | 35.0% | |
| ! | ACTTTCAAGAGTTTTCCATG+TGG | + | chr3.3:54046264-54046283 | None:intergenic | 35.0% |
| ! | AGACACATTTTTCATAGGCA+TGG | + | chr3.3:54047103-54047122 | None:intergenic | 35.0% |
| ! | AGCTAACCTAAGAAGCATAA+AGG | + | chr3.3:54045381-54045400 | None:intergenic | 35.0% |
| ! | ATGCTTCTTAGGTTAGCTAA+TGG | - | chr3.3:54045383-54045402 | MS.gene008569:intron | 35.0% |
| ! | CAATGGTATTGGAAAGATTG+TGG | - | chr3.3:54047774-54047793 | MS.gene008569:CDS | 35.0% |
| ! | CCTCCGAATTTCACATTTTT+CGG | - | chr3.3:54045984-54046003 | MS.gene008569:CDS | 35.0% |
| ! | GTCTTTTTCCAGGATATGTA+TGG | - | chr3.3:54046006-54046025 | MS.gene008569:CDS | 35.0% |
| ! | TTTTTCCAGGATATGTATGG+TGG | - | chr3.3:54046009-54046028 | MS.gene008569:CDS | 35.0% |
| !! | ACATTTTTCGGTCTTTTTCC+AGG | - | chr3.3:54045996-54046015 | MS.gene008569:CDS | 35.0% |
| !! | ACTACTTTGAAGTCAATAGG+TGG | - | chr3.3:54046036-54046055 | MS.gene008569:intron | 35.0% |
| !! | AGTTAAGTGATGGATTGGTT+AGG | + | chr3.3:54047544-54047563 | None:intergenic | 35.0% |
| !! | GACCATTCTGGAATAAACAA+TGG | - | chr3.3:54047757-54047776 | MS.gene008569:CDS | 35.0% |
| !! | GTTAAGTGATGGATTGGTTA+GGG | + | chr3.3:54047543-54047562 | None:intergenic | 35.0% |
| !! | GTTGGTGATATGGATGATAA+TGG | + | chr3.3:54047177-54047196 | None:intergenic | 35.0% |
| !! | TCGTAGATGGACTAGAAAAA+TGG | - | chr3.3:54045494-54045513 | MS.gene008569:intron | 35.0% |
| AAACTTCCTTCAGACCTTTC+TGG | - | chr3.3:54046731-54046750 | MS.gene008569:CDS | 40.0% | |
| AAAGCAATAGTAGGTGCAAG+TGG | - | chr3.3:54047324-54047343 | MS.gene008569:intron | 40.0% | |
| AACAACATGGTAAGCTTCCA+TGG | - | chr3.3:54046109-54046128 | MS.gene008569:CDS | 40.0% | |
| AATTGCTCGTAGAGGGTTTA+AGG | - | chr3.3:54046158-54046177 | MS.gene008569:CDS | 40.0% | |
| ACAAACGTTTCTGACCATTC+TGG | - | chr3.3:54047745-54047764 | MS.gene008569:CDS | 40.0% | |
| ACAACATGGTAAGCTTCCAT+GGG | - | chr3.3:54046110-54046129 | MS.gene008569:CDS | 40.0% | |
| AGAGAATTCCTTAGAAGCAG+GGG | - | chr3.3:54047673-54047692 | MS.gene008569:CDS | 40.0% | |
| AGTTCAAAGTGGTCACCATA+TGG | + | chr3.3:54047640-54047659 | None:intergenic | 40.0% | |
| ATCACCAACTATTGCCCTAA+AGG | - | chr3.3:54047188-54047207 | MS.gene008569:intron | 40.0% | |
| CAATTGCTCTAATATCGGGA+TGG | - | chr3.3:54045256-54045275 | MS.gene008569:CDS | 40.0% | |
| CAGAAAATGGCTTCATTCCA+TGG | + | chr3.3:54047401-54047420 | None:intergenic | 40.0% | |
| CAGAGAATTCCTTAGAAGCA+GGG | - | chr3.3:54047672-54047691 | MS.gene008569:CDS | 40.0% | |
| CCGAAAAATGTGAAATTCGG+AGG | + | chr3.3:54045987-54046006 | None:intergenic | 40.0% | |
| CTAATCAATATGGTGGCAAG+TGG | - | chr3.3:54046923-54046942 | MS.gene008569:CDS | 40.0% | |
| CTGAGATAATTGCTCGTAGA+GGG | - | chr3.3:54046151-54046170 | MS.gene008569:CDS | 40.0% | |
| GGAGAAGTGAAAGCAATAGT+AGG | - | chr3.3:54047315-54047334 | MS.gene008569:intron | 40.0% | |
| GGCTAAAGGGATATTAACCT+TGG | - | chr3.3:54046401-54046420 | MS.gene008569:intron | 40.0% | |
| GTCCGCAATTGCTCTAATAT+CGG | - | chr3.3:54045251-54045270 | MS.gene008569:CDS | 40.0% | |
| GTTAGCTAATGGTGTAGCAA+AGG | - | chr3.3:54045394-54045413 | MS.gene008569:intron | 40.0% | |
| TATTGCCACCATACATATCC+TGG | + | chr3.3:54046017-54046036 | None:intergenic | 40.0% | |
| TCAGAGAATTCCTTAGAAGC+AGG | - | chr3.3:54047671-54047690 | MS.gene008569:CDS | 40.0% | |
| TCCCGATATTAGAGCAATTG+CGG | + | chr3.3:54045256-54045275 | None:intergenic | 40.0% | |
| TCCGCAATTGCTCTAATATC+GGG | - | chr3.3:54045252-54045271 | MS.gene008569:CDS | 40.0% | |
| TTATTCCAGTACTTGGCGAA+AGG | + | chr3.3:54047053-54047072 | None:intergenic | 40.0% | |
| TTCGCAGCTAATACCAAACT+GGG | - | chr3.3:54047591-54047610 | MS.gene008569:CDS | 40.0% | |
| TTTCGCAGCTAATACCAAAC+TGG | - | chr3.3:54047590-54047609 | MS.gene008569:CDS | 40.0% | |
| ! | AGAAAAGGTGGTTTTCCTTC+AGG | - | chr3.3:54047811-54047830 | MS.gene008569:CDS | 40.0% |
| ! | CTGATTTTTCCATCTGATCG+CGG | + | chr3.3:54046197-54046216 | None:intergenic | 40.0% |
| ! | GAAGGAAAACCACCTTTTCT+CGG | + | chr3.3:54047811-54047830 | None:intergenic | 40.0% |
| ! | TGGTATTGGAAAGATTGTGG+CGG | - | chr3.3:54047777-54047796 | MS.gene008569:CDS | 40.0% |
| ! | TTTACTTTAGAAGCGCGAAG+AGG | + | chr3.3:54045443-54045462 | None:intergenic | 40.0% |
| !! | ACTGGGTTAGTTATGAGAAC+TGG | - | chr3.3:54047608-54047627 | MS.gene008569:CDS | 40.0% |
| !! | AGAACCTTTAGGGCAATAGT+TGG | + | chr3.3:54047195-54047214 | None:intergenic | 40.0% |
| !! | AGTCCACCATAGAAAGCATT+TGG | + | chr3.3:54046348-54046367 | None:intergenic | 40.0% |
| !! | GCTTTCTATGGTGGACTAAT+TGG | - | chr3.3:54046351-54046370 | MS.gene008569:intron | 40.0% |
| !! | TAGGGCAATAGTTGGTGATA+TGG | + | chr3.3:54047187-54047206 | None:intergenic | 40.0% |
| !! | TTGGAAAGGTGTTAAGCCAT+TGG | - | chr3.3:54045707-54045726 | MS.gene008569:intron | 40.0% |
| !!! | GTATCTTTTGAGGTCTTCCA+AGG | + | chr3.3:54046421-54046440 | None:intergenic | 40.0% |
| AAGTACCTTTCGCCAAGTAC+TGG | - | chr3.3:54047045-54047064 | MS.gene008569:intron | 45.0% | |
| AATACCACTTGAACCTGGAC+TGG | + | chr3.3:54045348-54045367 | None:intergenic | 45.0% | |
| AATAGTAGGTGCAAGTGGAG+GGG | - | chr3.3:54047329-54047348 | MS.gene008569:intron | 45.0% | |
| AATTTGTCTATGGACCCCGA+GGG | + | chr3.3:54046759-54046778 | None:intergenic | 45.0% | |
| AGGAATTCTCTGATATCGGC+AGG | + | chr3.3:54047664-54047683 | None:intergenic | 45.0% | |
| AGTCCAGGTTCAAGTGGTAT+TGG | - | chr3.3:54045347-54045366 | MS.gene008569:CDS | 45.0% | |
| ATAGAAACCTCTGCTGTTCC+TGG | + | chr3.3:54047366-54047385 | None:intergenic | 45.0% | |
| ATGGATGTTATCCGTGAAGG+GGG | - | chr3.3:54045275-54045294 | MS.gene008569:CDS | 45.0% | |
| CAATAGTAGGTGCAAGTGGA+GGG | - | chr3.3:54047328-54047347 | MS.gene008569:intron | 45.0% | |
| CAGCTGTAACACAAGGATGA+GGG | + | chr3.3:54046690-54046709 | None:intergenic | 45.0% | |
| CATGTCCTAAAACCCTTTGC+TGG | - | chr3.3:54047697-54047716 | MS.gene008569:CDS | 45.0% | |
| CATTATTCCAGGAACAGCAG+AGG | - | chr3.3:54047356-54047375 | MS.gene008569:intron | 45.0% | |
| CTACGAGCAATTATCTCAGC+AGG | + | chr3.3:54046150-54046169 | None:intergenic | 45.0% | |
| CTATGAAGCACAGATACGAC+AGG | + | chr3.3:54045894-54045913 | None:intergenic | 45.0% | |
| CTGTCCATTTATGGAAGCAG+TGG | + | chr3.3:54045180-54045199 | None:intergenic | 45.0% | |
| GAGAACTGGACAACTCCATA+TGG | - | chr3.3:54047622-54047641 | MS.gene008569:CDS | 45.0% | |
| GATGGATGTTATCCGTGAAG+GGG | - | chr3.3:54045274-54045293 | MS.gene008569:CDS | 45.0% | |
| GCTGAGATAATTGCTCGTAG+AGG | - | chr3.3:54046150-54046169 | MS.gene008569:CDS | 45.0% | |
| GGATGGATGTTATCCGTGAA+GGG | - | chr3.3:54045273-54045292 | MS.gene008569:CDS | 45.0% | |
| GGCATTTATGGTACACGTCA+AGG | + | chr3.3:54047013-54047032 | None:intergenic | 45.0% | |
| GGCTCCAAGATTCTATCATC+AGG | - | chr3.3:54047428-54047447 | MS.gene008569:intron | 45.0% | |
| GGTCCAAATGCTTTCTATGG+TGG | - | chr3.3:54046342-54046361 | MS.gene008569:intron | 45.0% | |
| GTGGAGCCTTTATGCTTCTT+AGG | - | chr3.3:54045372-54045391 | MS.gene008569:intron | 45.0% | |
| TATCGGCAGGAAGTTCAAAG+TGG | + | chr3.3:54047651-54047670 | None:intergenic | 45.0% | |
| TCCTAAAACCCTTTGCTGGT+GGG | - | chr3.3:54047701-54047720 | MS.gene008569:CDS | 45.0% | |
| TCGCAATGCTCGACAAACTT+GGG | + | chr3.3:54046872-54046891 | None:intergenic | 45.0% | |
| TCGCTAACGTCGTTAACCAA+TGG | + | chr3.3:54045726-54045745 | None:intergenic | 45.0% | |
| TGGTCTAGCAATAGCAGTTC+CGG | - | chr3.3:54046056-54046075 | MS.gene008569:intron | 45.0% | |
| TGTTCAGCAGCTGTAACACA+AGG | + | chr3.3:54046697-54046716 | None:intergenic | 45.0% | |
| TTCGCAATGCTCGACAAACT+TGG | + | chr3.3:54046873-54046892 | None:intergenic | 45.0% | |
| ! | ATTTTTCCATCTGATCGCGG+AGG | + | chr3.3:54046194-54046213 | None:intergenic | 45.0% |
| !! | GAAGCCATTTTCTGCTGTCA+CGG | - | chr3.3:54047407-54047426 | MS.gene008569:intron | 45.0% |
| !! | GATGATAATGGTCTCTTCCC+TGG | + | chr3.3:54047165-54047184 | None:intergenic | 45.0% |
| CAACTTACCAGCATCGTTGC+AGG | + | chr3.3:54046522-54046541 | None:intergenic | 50.0% | |
| CAATTTGTCTATGGACCCCG+AGG | + | chr3.3:54046760-54046779 | None:intergenic | 50.0% | |
| CACATGGCGTGGAAACAACA+TGG | - | chr3.3:54046096-54046115 | MS.gene008569:intron | 50.0% | |
| CATATTGCCCCACCAGCAAA+GGG | + | chr3.3:54047712-54047731 | None:intergenic | 50.0% | |
| CCACCAATACCACTTGAACC+TGG | + | chr3.3:54045353-54045372 | None:intergenic | 50.0% | |
| CCTAAAACCCTTTGCTGGTG+GGG | - | chr3.3:54047702-54047721 | MS.gene008569:CDS | 50.0% | |
| CCTTAGTATGCCTCCTCCTT+CGG | - | chr3.3:54046491-54046510 | MS.gene008569:CDS | 50.0% | |
| CGGGGTCCATAGACAAATTG+AGG | - | chr3.3:54046760-54046779 | MS.gene008569:CDS | 50.0% | |
| CTTAGTATGCCTCCTCCTTC+GGG | - | chr3.3:54046492-54046511 | MS.gene008569:CDS | 50.0% | |
| GCAATAGTAGGTGCAAGTGG+AGG | - | chr3.3:54047327-54047346 | MS.gene008569:intron | 50.0% | |
| GCAGCTGTAACACAAGGATG+AGG | + | chr3.3:54046691-54046710 | None:intergenic | 50.0% | |
| GGAGGGGCTAACATTATTCC+AGG | - | chr3.3:54047345-54047364 | MS.gene008569:intron | 50.0% | |
| GGGATGGATGTTATCCGTGA+AGG | - | chr3.3:54045272-54045291 | MS.gene008569:CDS | 50.0% | |
| GGTCTAGCAATAGCAGTTCC+GGG | - | chr3.3:54046057-54046076 | MS.gene008569:intron | 50.0% | |
| GTCAGTGATCCGAGAAAAGG+TGG | - | chr3.3:54047799-54047818 | MS.gene008569:CDS | 50.0% | |
| GTCCTAAAACCCTTTGCTGG+TGG | - | chr3.3:54047700-54047719 | MS.gene008569:CDS | 50.0% | |
| TCATCATGGAGCTGTTGCCA+CGG | - | chr3.3:54045226-54045245 | MS.gene008569:CDS | 50.0% | |
| TCCTCGTGTTAGCAGTGTTC+CGG | - | chr3.3:54045764-54045783 | MS.gene008569:intron | 50.0% | |
| TGTGGCTGCTGCTCTTTGTT+TGG | - | chr3.3:54045316-54045335 | MS.gene008569:CDS | 50.0% | |
| TGTTAGCAGTGTTCCGGTGT+CGG | - | chr3.3:54045770-54045789 | MS.gene008569:intron | 50.0% | |
| ! | CCAGGTTCAAGTGGTATTGG+TGG | - | chr3.3:54045350-54045369 | MS.gene008569:CDS | 50.0% |
| ! | GTGGCTGCTGCTCTTTGTTT+GGG | - | chr3.3:54045317-54045336 | MS.gene008569:CDS | 50.0% |
| ! | GTTGTTTCCACGCCATGTGA+AGG | + | chr3.3:54046095-54046114 | None:intergenic | 50.0% |
| ! | GTTTGTCGAGCATTGCGAAG+AGG | - | chr3.3:54046874-54046893 | MS.gene008569:CDS | 50.0% |
| ! | TGGCTGCTGCTCTTTGTTTG+GGG | - | chr3.3:54045318-54045337 | MS.gene008569:CDS | 50.0% |
| !! | AGAACTTGCTGGCCTTCACA+TGG | - | chr3.3:54046080-54046099 | MS.gene008569:intron | 50.0% |
| !! | GAGGAGTGTTCGTGCTTCAT+GGG | + | chr3.3:54045749-54045768 | None:intergenic | 50.0% |
| !! | GGTTCAAGTGGTATTGGTGG+TGG | - | chr3.3:54045353-54045372 | MS.gene008569:CDS | 50.0% |
| !! | TACAAGTGTCGGTGTCGTGT+CGG | + | chr3.3:54045815-54045834 | None:intergenic | 50.0% |
| ACCGGAACACTGCTAACACG+AGG | + | chr3.3:54045768-54045787 | None:intergenic | 55.0% | |
| AGAGCAATTGCGGACATCCG+TGG | + | chr3.3:54045246-54045265 | None:intergenic | 55.0% | |
| CAACTGCATGACCCCCTTCA+CGG | + | chr3.3:54045289-54045308 | None:intergenic | 55.0% | |
| CGTAGCGTGTTTGCTCCACA+TGG | - | chr3.3:54046246-54046265 | MS.gene008569:CDS | 55.0% | |
| GCATATTGCCCCACCAGCAA+AGG | + | chr3.3:54047713-54047732 | None:intergenic | 55.0% | |
| GCGGTCAGTGATCCGAGAAA+AGG | - | chr3.3:54047796-54047815 | MS.gene008569:CDS | 55.0% | |
| GGACATGACCCCTGCTTCTA+AGG | + | chr3.3:54047684-54047703 | None:intergenic | 55.0% | |
| GGAGCCGTGACAGCAGAAAA+TGG | + | chr3.3:54047414-54047433 | None:intergenic | 55.0% | |
| GGCTTTACAAGTCTCGCCCA+TGG | + | chr3.3:54046129-54046148 | None:intergenic | 55.0% | |
| GTTGCCAGTCCAGGTTCAAG+TGG | - | chr3.3:54045341-54045360 | MS.gene008569:CDS | 55.0% | |
| TCATGCAGTTGACGCAGCTG+TGG | - | chr3.3:54045298-54045317 | MS.gene008569:CDS | 55.0% | |
| TGAAGGCCAGCAAGTTCTCC+CGG | + | chr3.3:54046078-54046097 | None:intergenic | 55.0% | |
| ! | CCCCACCAGCAAAGGGTTTT+AGG | + | chr3.3:54047705-54047724 | None:intergenic | 55.0% |
| ! | CCGAAGGAGGAGGCATACTA+AGG | + | chr3.3:54046494-54046513 | None:intergenic | 55.0% |
| ! | GGCTGCTGCTCTTTGTTTGG+GGG | - | chr3.3:54045319-54045338 | MS.gene008569:CDS | 55.0% |
| !! | CGAGGAGTGTTCGTGCTTCA+TGG | + | chr3.3:54045750-54045769 | None:intergenic | 55.0% |
| AAGTTGGCAGGAGCTGGTGG+TGG | + | chr3.3:54047135-54047154 | None:intergenic | 60.0% | |
| ACACGACACGTGTCCGACAC+CGG | + | chr3.3:54045786-54045805 | None:intergenic | 60.0% | |
| ACGAAGTTGGCAGGAGCTGG+TGG | + | chr3.3:54047138-54047157 | None:intergenic | 60.0% | |
| AGTATGCCTCCTCCTTCGGG+TGG | - | chr3.3:54046495-54046514 | MS.gene008569:CDS | 60.0% | |
| ATCGTTGCAGGTCCACCCGA+AGG | + | chr3.3:54046510-54046529 | None:intergenic | 60.0% | |
| GAAGCTCCTCCGCGATCAGA+TGG | - | chr3.3:54046185-54046204 | MS.gene008569:CDS | 60.0% | |
| GCAGTTCCGGGAGAACTTGC+TGG | - | chr3.3:54046069-54046088 | MS.gene008569:intron | 60.0% | |
| TGTTTGGGGGTTGCCAGTCC+AGG | - | chr3.3:54045332-54045351 | MS.gene008569:CDS | 60.0% | |
| ! | AGGGCGCCAGAAAGGTCTGA+AGG | + | chr3.3:54046740-54046759 | None:intergenic | 60.0% |
| ! | TCAGACCTTTCTGGCGCCCT+CGG | - | chr3.3:54046740-54046759 | MS.gene008569:CDS | 60.0% |
| !! | TGTCGGTGTCGTGTCGGTGT+TGG | + | chr3.3:54045809-54045828 | None:intergenic | 60.0% |
| !! | TTGCTGGCCTTCACATGGCG+TGG | - | chr3.3:54046085-54046104 | MS.gene008569:intron | 60.0% |
| CTGCCAACTTCGTCGCGCCA+GGG | - | chr3.3:54047145-54047164 | MS.gene008569:intron | 65.0% | |
| CTTCCCTGGCGCGACGAAGT+TGG | + | chr3.3:54047151-54047170 | None:intergenic | 65.0% | |
| GCGACGAAGTTGGCAGGAGC+TGG | + | chr3.3:54047141-54047160 | None:intergenic | 65.0% | |
| GGGTGGACCTGCAACGATGC+TGG | - | chr3.3:54046512-54046531 | MS.gene008569:CDS | 65.0% | |
| GTTGCAGGTCCACCCGAAGG+AGG | + | chr3.3:54046507-54046526 | None:intergenic | 65.0% | |
| ! | AGACCTTTCTGGCGCCCTCG+GGG | - | chr3.3:54046742-54046761 | MS.gene008569:CDS | 65.0% |
| ! | CAGACCTTTCTGGCGCCCTC+GGG | - | chr3.3:54046741-54046760 | MS.gene008569:CDS | 65.0% |
| CCTGCCAACTTCGTCGCGCC+AGG | - | chr3.3:54047144-54047163 | MS.gene008569:intron | 70.0% | |
| CCTGGCGCGACGAAGTTGGC+AGG | + | chr3.3:54047147-54047166 | None:intergenic | 70.0% | |
| GCAGGTCCACCCGAAGGAGG+AGG | + | chr3.3:54046504-54046523 | None:intergenic | 70.0% | |
| !! | GGACCCCGAGGGCGCCAGAA+AGG | + | chr3.3:54046748-54046767 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 54045140 | 54047840 | 54045140 | ID=MS.gene008569 |
| chr3.3 | mRNA | 54045140 | 54047840 | 54045140 | ID=MS.gene008569.t1;Parent=MS.gene008569 |
| chr3.3 | exon | 54047523 | 54047840 | 54047523 | ID=MS.gene008569.t1.exon1;Parent=MS.gene008569.t1 |
| chr3.3 | CDS | 54047523 | 54047840 | 54047523 | ID=cds.MS.gene008569.t1;Parent=MS.gene008569.t1 |
| chr3.3 | exon | 54046447 | 54046962 | 54046447 | ID=MS.gene008569.t1.exon2;Parent=MS.gene008569.t1 |
| chr3.3 | CDS | 54046447 | 54046962 | 54046447 | ID=cds.MS.gene008569.t1;Parent=MS.gene008569.t1 |
| chr3.3 | exon | 54046103 | 54046273 | 54046103 | ID=MS.gene008569.t1.exon3;Parent=MS.gene008569.t1 |
| chr3.3 | CDS | 54046103 | 54046273 | 54046103 | ID=cds.MS.gene008569.t1;Parent=MS.gene008569.t1 |
| chr3.3 | exon | 54045771 | 54046037 | 54045771 | ID=MS.gene008569.t1.exon4;Parent=MS.gene008569.t1 |
| chr3.3 | CDS | 54045771 | 54046037 | 54045771 | ID=cds.MS.gene008569.t1;Parent=MS.gene008569.t1 |
| chr3.3 | exon | 54045531 | 54045668 | 54045531 | ID=MS.gene008569.t1.exon5;Parent=MS.gene008569.t1 |
| chr3.3 | CDS | 54045531 | 54045668 | 54045531 | ID=cds.MS.gene008569.t1;Parent=MS.gene008569.t1 |
| chr3.3 | exon | 54045140 | 54045382 | 54045140 | ID=MS.gene008569.t1.exon6;Parent=MS.gene008569.t1 |
| chr3.3 | CDS | 54045140 | 54045382 | 54045140 | ID=cds.MS.gene008569.t1;Parent=MS.gene008569.t1 |
| Gene Sequence |
| Protein sequence |
