Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38520.t1 | KEH34407.1 | 83.9 | 572 | 55 | 3 | 1 | 535 | 6 | 577 | 1.30E-265 | 925.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38520.t1 | Q680I5 | 53.9 | 571 | 219 | 10 | 4 | 534 | 11 | 577 | 1.3e-163 | 577.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38520.t1 | A0A072UXY0 | 83.9 | 572 | 55 | 3 | 1 | 535 | 6 | 577 | 9.7e-266 | 925.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38520 | MS.gene057884 | PPI |
| MS.gene38520 | MS.gene67840 | PPI |
| MS.gene38520 | MS.gene41579 | PPI |
| MS.gene81615 | MS.gene38520 | PPI |
| MS.gene013833 | MS.gene38520 | PPI |
| MS.gene81622 | MS.gene38520 | PPI |
| MS.gene75436 | MS.gene38520 | PPI |
| MS.gene016743 | MS.gene38520 | PPI |
| MS.gene38520 | MS.gene81617 | PPI |
| MS.gene013831 | MS.gene38520 | PPI |
| MS.gene016742 | MS.gene38520 | PPI |
| MS.gene070510 | MS.gene38520 | PPI |
| MS.gene38520 | MS.gene045074 | PPI |
| MS.gene045074 | MS.gene38520 | PPI |
| MS.gene37911 | MS.gene38520 | PPI |
| MS.gene064527 | MS.gene38520 | PPI |
| MS.gene75036 | MS.gene38520 | PPI |
| MS.gene070509 | MS.gene38520 | PPI |
| MS.gene38520 | MS.gene070503 | PPI |
| MS.gene38520 | MS.gene070507 | PPI |
| MS.gene008569 | MS.gene38520 | PPI |
| MS.gene38520 | MS.gene057883 | PPI |
| MS.gene38520 | MS.gene016758 | PPI |
| MS.gene38520 | MS.gene070492 | PPI |
| MS.gene81620 | MS.gene38520 | PPI |
| MS.gene070505 | MS.gene38520 | PPI |
| MS.gene049472 | MS.gene38520 | PPI |
| MS.gene057886 | MS.gene38520 | PPI |
| MS.gene38520 | MS.gene070511 | PPI |
| MS.gene38520 | MS.gene030326 | PPI |
| MS.gene66373 | MS.gene38520 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38520.t1 | MTR_3g466000 | 83.750 | 560 | 54 | 3 | 13 | 535 | 18 | 577 | 0.0 | 888 |
| MS.gene38520.t1 | MTR_3g087950 | 67.365 | 573 | 146 | 6 | 4 | 535 | 10 | 582 | 0.0 | 733 |
| MS.gene38520.t1 | MTR_6g090280 | 44.523 | 566 | 261 | 10 | 22 | 535 | 59 | 623 | 1.89e-142 | 424 |
| MS.gene38520.t1 | MTR_6g090280 | 43.067 | 476 | 222 | 8 | 108 | 535 | 1 | 475 | 5.22e-124 | 372 |
| MS.gene38520.t1 | MTR_6g090280 | 46.744 | 430 | 197 | 6 | 22 | 420 | 59 | 487 | 6.69e-118 | 357 |
| MS.gene38520.t1 | MTR_5g084180 | 72.816 | 103 | 26 | 2 | 6 | 106 | 20 | 122 | 9.59e-25 | 99.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38520.t1 | AT4G39640 | 54.355 | 574 | 217 | 9 | 1 | 534 | 3 | 571 | 0.0 | 598 |
| MS.gene38520.t1 | AT4G39640 | 54.355 | 574 | 217 | 9 | 1 | 534 | 3 | 571 | 0.0 | 598 |
| MS.gene38520.t1 | AT4G39650 | 54.116 | 571 | 218 | 10 | 4 | 534 | 11 | 577 | 0.0 | 582 |
| MS.gene38520.t1 | AT4G29210 | 44.170 | 566 | 261 | 11 | 24 | 535 | 73 | 637 | 1.23e-150 | 446 |
| MS.gene38520.t1 | AT4G29210 | 45.497 | 433 | 206 | 7 | 24 | 427 | 73 | 504 | 1.03e-125 | 378 |
| MS.gene38520.t1 | AT1G69820 | 58.716 | 218 | 62 | 4 | 267 | 456 | 2 | 219 | 1.29e-80 | 251 |
Find 140 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTCCATTGCTTCCATAAA+TGG | 0.167462 | 3.4:-61735419 | MS.gene38520:CDS |
| AAACTTCCTTCAGACCTTTC+TGG | 0.189248 | 3.4:-61732901 | MS.gene38520:CDS |
| AAACATTTGTAACTATAAAT+TGG | 0.239835 | 3.4:+61731851 | None:intergenic |
| GTTTAGCAGTGTATCGTTTA+AGG | 0.249177 | 3.4:+61733557 | None:intergenic |
| GTGGAGCATTTATGCTTCTT+AGG | 0.259055 | 3.4:-61735220 | MS.gene38520:CDS |
| CAGACCTTTCTGGCGCCCTT+GGG | 0.270126 | 3.4:-61732891 | MS.gene38520:CDS |
| GTGGCTGCTGCTTTATGTTT+GGG | 0.272170 | 3.4:-61735275 | MS.gene38520:CDS |
| TGTGGCTGCTGCTTTATGTT+TGG | 0.282673 | 3.4:-61735276 | MS.gene38520:CDS |
| ACAAATGTTTCGGACCATTC+TGG | 0.284997 | 3.4:-61731838 | MS.gene38520:CDS |
| GGACATGGCCCCTGCTTCTA+AGG | 0.295256 | 3.4:+61731902 | None:intergenic |
| TCATTGCCTCAATTTGTCTA+TGG | 0.296458 | 3.4:+61732866 | None:intergenic |
| AAACATAGAAAGAACCTTTA+GGG | 0.308155 | 3.4:+61732429 | None:intergenic |
| CCTAAGTATGCCTCCTCCTT+CGG | 0.314854 | 3.4:-61733494 | MS.gene38520:CDS |
| TCAGACCTTTCTGGCGCCCT+TGG | 0.317407 | 3.4:-61732892 | MS.gene38520:CDS |
| GTCCGACATTGTTCTAAAAT+CGG | 0.329897 | 3.4:-61735341 | MS.gene38520:CDS |
| CTAGTGATATTTACAAAATC+AGG | 0.348284 | 3.4:+61732808 | None:intergenic |
| TGGTCTAGCAATAGCAGTTC+CGG | 0.349888 | 3.4:-61734505 | MS.gene38520:CDS |
| TATGGTCCAAATGCTTTCTA+TGG | 0.358152 | 3.4:-61734222 | MS.gene38520:intron |
| TTTCGCAGCTAATACCAAAC+TGG | 0.359857 | 3.4:-61731993 | MS.gene38520:intron |
| ATTTATAGTTACAAATGTTT+CGG | 0.363932 | 3.4:-61731848 | MS.gene38520:CDS |
| TAGGGCAATAGTTGGTGATA+TGG | 0.367941 | 3.4:+61732447 | None:intergenic |
| CTAAGTATGCCTCCTCCTTC+GGG | 0.368983 | 3.4:-61733493 | MS.gene38520:CDS |
| CAACTTACCAGCATCGTTAC+AGG | 0.373723 | 3.4:+61733466 | None:intergenic |
| TTCAATATTATTCCAGTACT+TGG | 0.375460 | 3.4:+61732574 | None:intergenic |
| CCTGCCAACTTTGTCGCGCC+AGG | 0.383292 | 3.4:-61732487 | MS.gene38520:CDS |
| CATGTCCTAAAACCCTTTGC+TGG | 0.390693 | 3.4:-61731886 | MS.gene38520:CDS |
| CCAAGAAAATCAATAGATAT+AGG | 0.401064 | 3.4:+61733526 | None:intergenic |
| CTAAGAGTGATTTCAAAGTA+TGG | 0.401738 | 3.4:-61734240 | MS.gene38520:CDS |
| GCAGTTCCGGGAGAACTTGC+TGG | 0.413064 | 3.4:-61734492 | MS.gene38520:CDS |
| ATCTCATAACTAACCCAGTT+TGG | 0.417128 | 3.4:+61731979 | None:intergenic |
| ATGCTTCTTAGGTTAGCTAA+TGG | 0.432318 | 3.4:-61735209 | MS.gene38520:CDS |
| GGTCCACCATAGAAAGCATT+TGG | 0.433494 | 3.4:+61734216 | None:intergenic |
| ACTTTGAGTACTAATCAATA+TGG | 0.435171 | 3.4:-61732718 | MS.gene38520:intron |
| CTAATCAATATGGTGGCAAA+TGG | 0.435623 | 3.4:-61732708 | MS.gene38520:CDS |
| GGCTCCAAGGTTCTATCATC+AGG | 0.438235 | 3.4:-61732172 | MS.gene38520:intron |
| AAGTTCCTTTCACCAAGTAC+TGG | 0.441783 | 3.4:-61732586 | MS.gene38520:CDS |
| TGGAGGGGCAAACATTATTC+CGG | 0.442852 | 3.4:-61732255 | MS.gene38520:CDS |
| GAAGGAAAACCACCCTTTCT+CGG | 0.454525 | 3.4:+61731775 | None:intergenic |
| ATCACCAACTATTGCCCTAA+AGG | 0.461822 | 3.4:-61732443 | MS.gene38520:intron |
| ACTGGGTTAGTTATGAGATC+TGG | 0.462039 | 3.4:-61731975 | MS.gene38520:CDS |
| CACCGTTGTTTGTTCCAGAA+TGG | 0.463693 | 3.4:+61731824 | None:intergenic |
| TGGCTGCTGCTTTATGTTTG+GGG | 0.464960 | 3.4:-61735274 | MS.gene38520:CDS |
| AGTTCAAAGTGTTCACCATA+TGG | 0.465251 | 3.4:+61731946 | None:intergenic |
| AACAACATGGTAAGCTTCCA+TGG | 0.466710 | 3.4:-61734452 | MS.gene38520:CDS |
| AGTCCAGGTTCAAGTGGTAT+TGG | 0.471417 | 3.4:-61735245 | MS.gene38520:CDS |
| TCCTAAAACCCTTTGCTGGT+GGG | 0.471834 | 3.4:-61731882 | MS.gene38520:CDS |
| TCCGACATTGTTCTAAAATC+GGG | 0.472038 | 3.4:-61735340 | MS.gene38520:CDS |
| AATACTACTTTGAAGTCAAT+AGG | 0.472553 | 3.4:-61734528 | MS.gene38520:CDS |
| TTGTCCATTTATGGAAGCAA+TGG | 0.473447 | 3.4:+61735415 | None:intergenic |
| CCACAGCTGCATCCACTGCA+TGG | 0.477539 | 3.4:+61735294 | None:intergenic |
| CCTAAAACCCTTTGCTGGTG+GGG | 0.481001 | 3.4:-61731881 | MS.gene38520:CDS |
| GAAGCTCCTCCGCGATCAGA+TGG | 0.484080 | 3.4:-61734376 | MS.gene38520:CDS |
| GTCCTAAAACCCTTTGCTGG+TGG | 0.484388 | 3.4:-61731883 | MS.gene38520:CDS |
| TCAGAGAATTCCTTAGAAGC+AGG | 0.484703 | 3.4:-61731912 | MS.gene38520:CDS |
| ACGATACACTGCTAAACAAA+AGG | 0.486357 | 3.4:-61733551 | MS.gene38520:CDS |
| GGTTCAAGTGGTATTGGTGG+TGG | 0.486626 | 3.4:-61735239 | MS.gene38520:CDS |
| CCAGGTTCAAGTGGTATTGG+TGG | 0.488566 | 3.4:-61735242 | MS.gene38520:CDS |
| CAAATTGCCCCACCAGCAAA+GGG | 0.489041 | 3.4:+61731874 | None:intergenic |
| CTTCCCTGGCGCGACAAAGT+TGG | 0.489876 | 3.4:+61732483 | None:intergenic |
| GCGACAAAGTTGGCAGGAGC+TGG | 0.489883 | 3.4:+61732493 | None:intergenic |
| CCATGCAGTGGATGCAGCTG+TGG | 0.493293 | 3.4:-61735294 | MS.gene38520:CDS |
| GGTCTAGCAATAGCAGTTCC+GGG | 0.493839 | 3.4:-61734504 | MS.gene38520:CDS |
| GCAAATTGCCCCACCAGCAA+AGG | 0.496917 | 3.4:+61731873 | None:intergenic |
| CCACCAATACCACTTGAACC+TGG | 0.498702 | 3.4:+61735242 | None:intergenic |
| CTACGAGCAATTATCTCAGC+AGG | 0.499103 | 3.4:+61734414 | None:intergenic |
| GGCAGTCAGTGATCCGAGAA+AGG | 0.502271 | 3.4:-61731788 | MS.gene38520:CDS |
| GTTGGTGATATGGATGATAA+TGG | 0.505734 | 3.4:+61732457 | None:intergenic |
| CTATTATACAATAAGAAACT+AGG | 0.508879 | 3.4:-61734270 | MS.gene38520:CDS |
| TAATGAACGACAAAGGTCTT+CGG | 0.509200 | 3.4:-61734335 | MS.gene38520:CDS |
| AGAACCTTTAGGGCAATAGT+TGG | 0.509201 | 3.4:+61732439 | None:intergenic |
| AGACCTTTCTGGCGCCCTTG+GGG | 0.511666 | 3.4:-61732890 | MS.gene38520:CDS |
| GAGATCTGGACAACTCCATA+TGG | 0.513769 | 3.4:-61731961 | MS.gene38520:CDS |
| CATGGAAATCTCTTGAAAGT+AGG | 0.514136 | 3.4:-61734297 | MS.gene38520:CDS |
| GATGATAATGGTCTCTTCCC+TGG | 0.515652 | 3.4:+61732469 | None:intergenic |
| CCGAAGGAGGAGGCATACTT+AGG | 0.515919 | 3.4:+61733494 | None:intergenic |
| CGGAGTGTGTTTGCACCACA+TGG | 0.519127 | 3.4:-61734315 | MS.gene38520:CDS |
| GGCTGCTGCTTTATGTTTGG+GGG | 0.520078 | 3.4:-61735273 | MS.gene38520:CDS |
| TATGCTATGAGAATGAATCT+TGG | 0.525741 | 3.4:-61732835 | MS.gene38520:CDS |
| AGGAATTCTCTGATATCAGC+AGG | 0.528201 | 3.4:+61731922 | None:intergenic |
| CTGAGATAATTGCTCGTAGA+GGG | 0.531028 | 3.4:-61734410 | MS.gene38520:CDS |
| TTTATGAATCACTTCGTCCA+TGG | 0.532903 | 3.4:-61732219 | MS.gene38520:CDS |
| GGACCCCAAGGGCGCCAGAA+AGG | 0.533287 | 3.4:+61732887 | None:intergenic |
| TATGGTACACGTCAAGGAAA+CGG | 0.534176 | 3.4:+61732627 | None:intergenic |
| GGGATGGATGTTATCCATGA+AGG | 0.543035 | 3.4:-61735320 | MS.gene38520:CDS |
| AATACCACTTGAACCTGGAC+TGG | 0.543182 | 3.4:+61735247 | None:intergenic |
| CCTGGCGCGACAAAGTTGGC+AGG | 0.546658 | 3.4:+61732487 | None:intergenic |
| TTCGCAGCTAATACCAAACT+GGG | 0.547751 | 3.4:-61731992 | MS.gene38520:intron |
| GGGTGGACCTGTAACGATGC+TGG | 0.547919 | 3.4:-61733473 | MS.gene38520:intron |
| TGGAATCAGATCAATGATCA+TGG | 0.548192 | 3.4:-61732688 | MS.gene38520:CDS |
| TTTACCTTAAAAGCACAAAG+AGG | 0.549220 | 3.4:+61735152 | None:intergenic |
| TGAATTTATGGTACACGTCA+AGG | 0.552181 | 3.4:+61732621 | None:intergenic |
| CTGCCAACTTTGTCGCGCCA+GGG | 0.552264 | 3.4:-61732486 | MS.gene38520:CDS |
| TGAAGGCCAGCAAGTTCTCC+CGG | 0.555393 | 3.4:+61734486 | None:intergenic |
| GGCTTTACAAGTCTCGCCCA+TGG | 0.557354 | 3.4:+61734435 | None:intergenic |
| GTTGTTTCCACGCCATGTGA+AGG | 0.557616 | 3.4:+61734469 | None:intergenic |
| AAGTTGGCAGGAGCTGGTGG+TGG | 0.557997 | 3.4:+61732499 | None:intergenic |
| AGAACTTGCTGGCCTTCACA+TGG | 0.561466 | 3.4:-61734481 | MS.gene38520:CDS |
| CAATTTGTCTATGGACCCCA+AGG | 0.564162 | 3.4:+61732875 | None:intergenic |
| TTTATGCTGTCACGGCTCCA+AGG | 0.566715 | 3.4:-61732185 | MS.gene38520:CDS |
| AATAATATTGAACAATGAGA+TGG | 0.567223 | 3.4:-61732563 | MS.gene38520:CDS |
| TGGGGTCCATAGACAAATTG+AGG | 0.568572 | 3.4:-61732872 | MS.gene38520:CDS |
| GTTAGCTAATGGTGCAGCAA+AGG | 0.570001 | 3.4:-61735198 | MS.gene38520:CDS |
| GTATCGTTTAAGGTCTTCCA+CGG | 0.570359 | 3.4:+61733567 | None:intergenic |
| GCAGTCAGTGATCCGAGAAA+GGG | 0.571477 | 3.4:-61731787 | MS.gene38520:CDS |
| ACAGGTCCACCCGAAGGAGG+AGG | 0.574119 | 3.4:+61733484 | None:intergenic |
| TTGCTGGCCTTCACATGGCG+TGG | 0.579240 | 3.4:-61734476 | MS.gene38520:CDS |
| TTATTCCAGTACTTGGTGAA+AGG | 0.579633 | 3.4:+61732581 | None:intergenic |
| GGATGGATGTTATCCATGAA+GGG | 0.581232 | 3.4:-61735319 | MS.gene38520:CDS |
| CATAAAACGACTTCATTCCA+TGG | 0.586459 | 3.4:+61732202 | None:intergenic |
| GTTGCCAGTCCAGGTTCAAG+TGG | 0.588058 | 3.4:-61735251 | MS.gene38520:CDS |
| CAGAGAATTCCTTAGAAGCA+GGG | 0.589836 | 3.4:-61731911 | MS.gene38520:CDS |
| ACATTATTCCGGAACAGCAG+AGG | 0.591193 | 3.4:-61732244 | MS.gene38520:CDS |
| CAACGGTGTTAGAAAGATTG+TGG | 0.591538 | 3.4:-61731809 | MS.gene38520:CDS |
| CACATGGCGTGGAAACAACA+TGG | 0.592237 | 3.4:-61734465 | MS.gene38520:CDS |
| TATACCTGATGATAGAACCT+TGG | 0.593171 | 3.4:+61732168 | None:intergenic |
| ACAAAGTTGGCAGGAGCTGG+TGG | 0.593176 | 3.4:+61732496 | None:intergenic |
| AGCGGTTTCTCTCATATCAA+AGG | 0.598918 | 3.4:+61735175 | None:intergenic |
| GTCAGTGATCCGAGAAAGGG+TGG | 0.605438 | 3.4:-61731784 | MS.gene38520:CDS |
| AATGAAGTAATCGCTCATCA+TGG | 0.608619 | 3.4:-61735380 | MS.gene38520:CDS |
| AATAGTAGGTGCAAGTGGAG+GGG | 0.613136 | 3.4:-61732270 | MS.gene38520:intron |
| ATCGTTACAGGTCCACCCGA+AGG | 0.616120 | 3.4:+61733478 | None:intergenic |
| GAAATGTCTCAAACACCTGA+AGG | 0.619995 | 3.4:+61731757 | None:intergenic |
| AGTATGCCTCCTCCTTCGGG+TGG | 0.622722 | 3.4:-61733490 | MS.gene38520:CDS |
| AGAACAATGTCGGACATCAG+TGG | 0.624357 | 3.4:+61735349 | None:intergenic |
| GATGGATGTTATCCATGAAG+GGG | 0.628365 | 3.4:-61735318 | MS.gene38520:CDS |
| AGAGAATTCCTTAGAAGCAG+GGG | 0.628550 | 3.4:-61731910 | MS.gene38520:CDS |
| ACATTGTTCTAAAATCGGGA+TGG | 0.633366 | 3.4:-61735336 | MS.gene38520:CDS |
| TTGAGTACTAATCAATATGG+TGG | 0.636987 | 3.4:-61732715 | MS.gene38520:intron |
| GATAACAATGATATTAACCG+TGG | 0.638865 | 3.4:-61733584 | MS.gene38520:CDS |
| AGGGCGCCAGAAAGGTCTGA+AGG | 0.639518 | 3.4:+61732895 | None:intergenic |
| ACAACATGGTAAGCTTCCAT+GGG | 0.640600 | 3.4:-61734451 | MS.gene38520:CDS |
| GTTACAGGTCCACCCGAAGG+AGG | 0.645073 | 3.4:+61733481 | None:intergenic |
| GACCATTCTGGAACAAACAA+CGG | 0.652332 | 3.4:-61731826 | MS.gene38520:CDS |
| CTTAAAAGCACAAAGAGGAG+CGG | 0.655257 | 3.4:+61735157 | None:intergenic |
| ACAGATATAATGAACGACAA+AGG | 0.666346 | 3.4:-61734342 | MS.gene38520:CDS |
| GCTGAGATAATTGCTCGTAG+AGG | 0.669882 | 3.4:-61734411 | MS.gene38520:CDS |
| ACTACTTTGAAGTCAATAGG+TGG | 0.699074 | 3.4:-61734525 | MS.gene38520:CDS |
| ATGGATGTTATCCATGAAGG+GGG | 0.704860 | 3.4:-61735317 | MS.gene38520:CDS |
| AATTTGTCTATGGACCCCAA+GGG | 0.739993 | 3.4:+61732876 | None:intergenic |
| ACTTTCAAGAGATTTCCATG+TGG | 0.774772 | 3.4:+61734300 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAACATTATTTTTGTTT+TGG | + | chr3.4:61733246-61733265 | None:intergenic | 10.0% |
| !!! | TTTTATTTATATTTCAAACT+CGG | - | chr3.4:61733812-61733831 | MS.gene38520:intron | 10.0% |
| !! | AAAATACATATACATAAATG+TGG | - | chr3.4:61733316-61733335 | MS.gene38520:intron | 15.0% |
| !! | AAACATTTGTAACTATAAAT+TGG | + | chr3.4:61735369-61735388 | None:intergenic | 15.0% |
| !! | AAATACATATACATAAATGT+GGG | - | chr3.4:61733317-61733336 | MS.gene38520:intron | 15.0% |
| !! | ATTTATAGTTACAAATGTTT+CGG | - | chr3.4:61735369-61735388 | MS.gene38520:CDS | 15.0% |
| !! | TTTAATGATTATAAAATCCA+TGG | + | chr3.4:61733844-61733863 | None:intergenic | 15.0% |
| !! | TTTATTTATATTTCAAACTC+GGG | - | chr3.4:61733813-61733832 | MS.gene38520:intron | 15.0% |
| !!! | AAAAATACATTTAAGCTTTT+AGG | - | chr3.4:61735134-61735153 | MS.gene38520:intron | 15.0% |
| !!! | AAATTTTTTTTCTCATAAAG+TGG | + | chr3.4:61733932-61733951 | None:intergenic | 15.0% |
| !!! | ATGGTTTTAAATAATTTAGA+CGG | - | chr3.4:61732138-61732157 | MS.gene38520:intron | 15.0% |
| !!! | ATTTATGTATATGTATTTTG+TGG | + | chr3.4:61733315-61733334 | None:intergenic | 15.0% |
| !!! | TAATTTTCTCAAATTATTAG+TGG | - | chr3.4:61732486-61732505 | MS.gene38520:CDS | 15.0% |
| !! | AAGAAAAAAAACATGAAGTA+GGG | + | chr3.4:61734219-61734238 | None:intergenic | 20.0% |
| !! | AATAATATTGAACAATGAGA+TGG | - | chr3.4:61734654-61734673 | MS.gene38520:intron | 20.0% |
| !! | AATACATATACATAAATGTG+GGG | - | chr3.4:61733318-61733337 | MS.gene38520:intron | 20.0% |
| !! | CTATTATACAATAAGAAACT+AGG | - | chr3.4:61732947-61732966 | MS.gene38520:intron | 20.0% |
| !! | TAAGAAAAAAAACATGAAGT+AGG | + | chr3.4:61734220-61734239 | None:intergenic | 20.0% |
| !!! | AACATTATTTTTGTTTTGGT+AGG | + | chr3.4:61733242-61733261 | None:intergenic | 20.0% |
| !!! | AATGAAAAAATTTTGCCTTT+TGG | - | chr3.4:61733352-61733371 | MS.gene38520:intron | 20.0% |
| !!! | ATGAAAAAATTTTGCCTTTT+GGG | - | chr3.4:61733353-61733372 | MS.gene38520:intron | 20.0% |
| !!! | ATGTACTTTTTATCAATGAA+AGG | - | chr3.4:61734240-61734259 | MS.gene38520:CDS | 20.0% |
| !!! | ATTTAGTGACGAAAATATTT+TGG | - | chr3.4:61732219-61732238 | MS.gene38520:CDS | 20.0% |
| !!! | GAAATCTAAAACACTAATTT+TGG | + | chr3.4:61734098-61734117 | None:intergenic | 20.0% |
| !!! | TGTACCATAAATTCATTTTT+TGG | - | chr3.4:61734604-61734623 | MS.gene38520:intron | 20.0% |
| !!! | TGTACTTTTTATCAATGAAA+GGG | - | chr3.4:61734241-61734260 | MS.gene38520:CDS | 20.0% |
| !!! | TGTTTTTATTTGTCCATTTA+TGG | + | chr3.4:61731814-61731833 | None:intergenic | 20.0% |
| !!! | TTAACCACATTAGTTTTTTT+TGG | - | chr3.4:61733897-61733916 | MS.gene38520:intron | 20.0% |
| !!! | TTTCGAATTTAGATTTTATG+CGG | - | chr3.4:61734026-61734045 | MS.gene38520:intron | 20.0% |
| ! | AAAACATAGAAAGAACCTTT+AGG | + | chr3.4:61734792-61734811 | None:intergenic | 25.0% |
| ! | AAACATAGAAAGAACCTTTA+GGG | + | chr3.4:61734791-61734810 | None:intergenic | 25.0% |
| ! | AAGACCAAAAATGTGAAATT+CGG | + | chr3.4:61732647-61732666 | None:intergenic | 25.0% |
| ! | ACTTTGAGTACTAATCAATA+TGG | - | chr3.4:61734499-61734518 | MS.gene38520:CDS | 25.0% |
| ! | ATACATATACATAAATGTGG+GGG | - | chr3.4:61733319-61733338 | MS.gene38520:intron | 25.0% |
| ! | CCAAGAAAATCAATAGATAT+AGG | + | chr3.4:61733694-61733713 | None:intergenic | 25.0% |
| ! | CGAACCAAAAAATGAATTTA+TGG | + | chr3.4:61734611-61734630 | None:intergenic | 25.0% |
| ! | CTAGTGATATTTACAAAATC+AGG | + | chr3.4:61734412-61734431 | None:intergenic | 25.0% |
| ! | TACTAATTATAGAGCATGTT+TGG | - | chr3.4:61732311-61732330 | MS.gene38520:intron | 25.0% |
| ! | TCGTATATGGAATAGAAAAA+TGG | - | chr3.4:61732119-61732138 | MS.gene38520:intron | 25.0% |
| ! | TGCATAATCTTGATCAAAAT+CGG | - | chr3.4:61732271-61732290 | MS.gene38520:intron | 25.0% |
| ! | TTAACCAAGGTTATCAAAAT+CGG | - | chr3.4:61733070-61733089 | MS.gene38520:intron | 25.0% |
| ! | TTCAATATTATTCCAGTACT+TGG | + | chr3.4:61734646-61734665 | None:intergenic | 25.0% |
| ! | TTTCTCATAAAGTGGTTAAA+GGG | + | chr3.4:61733924-61733943 | None:intergenic | 25.0% |
| !! | TCATTGATTATTGTCGTATA+TGG | - | chr3.4:61732106-61732125 | MS.gene38520:intron | 25.0% |
| !! | TTTTCTCATAAAGTGGTTAA+AGG | + | chr3.4:61733925-61733944 | None:intergenic | 25.0% |
| !! | TTTTTGGACACATTTTTCAT+AGG | + | chr3.4:61734694-61734713 | None:intergenic | 25.0% |
| !!! | AATACTACTTTGAAGTCAAT+AGG | - | chr3.4:61732689-61732708 | MS.gene38520:CDS | 25.0% |
| !!! | CCTATATCTATTGATTTTCT+TGG | - | chr3.4:61733691-61733710 | MS.gene38520:intron | 25.0% |
| !!! | TCGTTGCATATTTTAGTAAT+AGG | - | chr3.4:61735089-61735108 | MS.gene38520:intron | 25.0% |
| !!! | TGCATATTTTAGTAATAGGA+GGG | - | chr3.4:61735093-61735112 | MS.gene38520:intron | 25.0% |
| !!! | TTGCATATTTTAGTAATAGG+AGG | - | chr3.4:61735092-61735111 | MS.gene38520:intron | 25.0% |
| AAAATCGCAATCAAAATCGA+AGG | - | chr3.4:61733137-61733156 | MS.gene38520:intron | 30.0% | |
| ACAGATATAATGAACGACAA+AGG | - | chr3.4:61732875-61732894 | MS.gene38520:CDS | 30.0% | |
| AGCTGCGAAAAATAACTAAA+TGG | + | chr3.4:61735214-61735233 | None:intergenic | 30.0% | |
| ATTATAGAGCATGTTTGGAA+AGG | - | chr3.4:61732316-61732335 | MS.gene38520:intron | 30.0% | |
| CTAAGAGTGATTTCAAAGTA+TGG | - | chr3.4:61732977-61732996 | MS.gene38520:intron | 30.0% | |
| GAACATCTTTAACTAGATTG+AGG | + | chr3.4:61733033-61733052 | None:intergenic | 30.0% | |
| GATAACAATGATATTAACCG+TGG | - | chr3.4:61733633-61733652 | MS.gene38520:intron | 30.0% | |
| TAAAATCGCAATCAAAATCG+AGG | - | chr3.4:61733136-61733155 | MS.gene38520:intron | 30.0% | |
| TAACCAAGGTTATCAAAATC+GGG | - | chr3.4:61733071-61733090 | MS.gene38520:intron | 30.0% | |
| TACATATACATAAATGTGGG+GGG | - | chr3.4:61733320-61733339 | MS.gene38520:intron | 30.0% | |
| TATGCTATGAGAATGAATCT+TGG | - | chr3.4:61734382-61734401 | MS.gene38520:CDS | 30.0% | |
| TCTAGTTAAAGATGTTCAGA+AGG | - | chr3.4:61733036-61733055 | MS.gene38520:intron | 30.0% | |
| TCTCAAATTATTAGTGGTGT+CGG | - | chr3.4:61732492-61732511 | MS.gene38520:CDS | 30.0% | |
| TGATTACAACTTACAAGTGT+TGG | + | chr3.4:61732454-61732473 | None:intergenic | 30.0% | |
| TTGAGTACTAATCAATATGG+TGG | - | chr3.4:61734502-61734521 | MS.gene38520:CDS | 30.0% | |
| TTTCATCGTAATGTCAATTG+CGG | - | chr3.4:61733949-61733968 | MS.gene38520:intron | 30.0% | |
| ! | AAATCGAAGGATTTTACTCA+AGG | - | chr3.4:61733150-61733169 | MS.gene38520:intron | 30.0% |
| ! | ATAAGTGTCAATTTTTGACC+CGG | + | chr3.4:61733424-61733443 | None:intergenic | 30.0% |
| ! | CGACTTTTTATACTTCAGAA+TGG | - | chr3.4:61734912-61734931 | MS.gene38520:intron | 30.0% |
| ! | GCTATTTAGAATGTTAGAGT+TGG | - | chr3.4:61733972-61733991 | MS.gene38520:intron | 30.0% |
| ! | TTTACCTTAAAAGCACAAAG+AGG | + | chr3.4:61732068-61732087 | None:intergenic | 30.0% |
| !! | ATAGGATTTTGCCTGTTTTT+GGG | - | chr3.4:61733533-61733552 | MS.gene38520:CDS | 30.0% |
| !! | ATTTTGGTCTTCGATATGAT+CGG | - | chr3.4:61732235-61732254 | MS.gene38520:CDS | 30.0% |
| !! | CCTTTTGGGTATTTATAGAA+CGG | - | chr3.4:61733367-61733386 | MS.gene38520:intron | 30.0% |
| !!! | AGGATTTTGATGGATTTTGA+AGG | + | chr3.4:61733465-61733484 | None:intergenic | 30.0% |
| AAAACATGAAGTAGGGTTAC+CGG | + | chr3.4:61734212-61734231 | None:intergenic | 35.0% | |
| AAAGATGTTCAGAAGGCTAA+AGG | - | chr3.4:61733043-61733062 | MS.gene38520:intron | 35.0% | |
| AACGGATCATGGATTCAAAT+TGG | - | chr3.4:61733385-61733404 | MS.gene38520:intron | 35.0% | |
| AAGATGTTCAGAAGGCTAAA+GGG | - | chr3.4:61733044-61733063 | MS.gene38520:intron | 35.0% | |
| AATGAAGTAATCGCTCATCA+TGG | - | chr3.4:61731837-61731856 | MS.gene38520:CDS | 35.0% | |
| AATTGGGTCAATTTACGAAC+CGG | - | chr3.4:61733402-61733421 | MS.gene38520:intron | 35.0% | |
| ACCAAAAATGTGAAATTCGG+AGG | + | chr3.4:61732644-61732663 | None:intergenic | 35.0% | |
| ACGATACACTGCTAAACAAA+AGG | - | chr3.4:61733666-61733685 | MS.gene38520:intron | 35.0% | |
| ACGGATCATGGATTCAAATT+GGG | - | chr3.4:61733386-61733405 | MS.gene38520:intron | 35.0% | |
| ACTTTCAAGAGATTTCCATG+TGG | + | chr3.4:61732920-61732939 | None:intergenic | 35.0% | |
| ATCTCATAACTAACCCAGTT+TGG | + | chr3.4:61735241-61735260 | None:intergenic | 35.0% | |
| CATAAAACGACTTCATTCCA+TGG | + | chr3.4:61735018-61735037 | None:intergenic | 35.0% | |
| CATGGAAATCTCTTGAAAGT+AGG | - | chr3.4:61732920-61732939 | MS.gene38520:CDS | 35.0% | |
| CCGTTCTATAAATACCCAAA+AGG | + | chr3.4:61733370-61733389 | None:intergenic | 35.0% | |
| CTAATCAATATGGTGGCAAA+TGG | - | chr3.4:61734509-61734528 | MS.gene38520:CDS | 35.0% | |
| CTAGACTGTTGGATTAAGAT+CGG | + | chr3.4:61734150-61734169 | None:intergenic | 35.0% | |
| GACTTTACTTCAAGTCGAAA+GGG | - | chr3.4:61733093-61733112 | MS.gene38520:intron | 35.0% | |
| GGGACCAAAAAAAACTAATG+TGG | + | chr3.4:61733904-61733923 | None:intergenic | 35.0% | |
| GGTATTTATAGAACGGATCA+TGG | - | chr3.4:61733374-61733393 | MS.gene38520:intron | 35.0% | |
| GTTTAGCAGTGTATCGTTTA+AGG | + | chr3.4:61733663-61733682 | None:intergenic | 35.0% | |
| GTTTCCATTGCTTCCATAAA+TGG | - | chr3.4:61731798-61731817 | MS.gene38520:CDS | 35.0% | |
| TAATGAACGACAAAGGTCTT+CGG | - | chr3.4:61732882-61732901 | MS.gene38520:CDS | 35.0% | |
| TATACCTGATGATAGAACCT+TGG | + | chr3.4:61735052-61735071 | None:intergenic | 35.0% | |
| TATGGTCCAAATGCTTTCTA+TGG | - | chr3.4:61732995-61733014 | MS.gene38520:intron | 35.0% | |
| TCATTGCCTCAATTTGTCTA+TGG | + | chr3.4:61734354-61734373 | None:intergenic | 35.0% | |
| TCGATATAGCATAGCAAAGT+CGG | - | chr3.4:61733185-61733204 | MS.gene38520:intron | 35.0% | |
| TGAAATCCATTCAAAATCGC+AGG | + | chr3.4:61733485-61733504 | None:intergenic | 35.0% | |
| TGAATTTATGGTACACGTCA+AGG | + | chr3.4:61734599-61734618 | None:intergenic | 35.0% | |
| TGGAATCAGATCAATGATCA+TGG | - | chr3.4:61734529-61734548 | MS.gene38520:CDS | 35.0% | |
| TTAACTAGATTGAGGCCAAT+CGG | + | chr3.4:61733025-61733044 | None:intergenic | 35.0% | |
| TTCAGTGACCGAAAAGAATT+CGG | - | chr3.4:61732183-61732202 | MS.gene38520:CDS | 35.0% | |
| TTCATCGTAATGTCAATTGC+GGG | - | chr3.4:61733950-61733969 | MS.gene38520:intron | 35.0% | |
| TTGTCCATTTATGGAAGCAA+TGG | + | chr3.4:61731805-61731824 | None:intergenic | 35.0% | |
| TTTATGAATCACTTCGTCCA+TGG | - | chr3.4:61734998-61735017 | MS.gene38520:intron | 35.0% | |
| ! | ACCTCCGAATTTCACATTTT+TGG | - | chr3.4:61732640-61732659 | MS.gene38520:CDS | 35.0% |
| ! | AGTTCAAAGTGTTCACCATA+TGG | + | chr3.4:61735274-61735293 | None:intergenic | 35.0% |
| ! | ATGCTTCTTAGGTTAGCTAA+TGG | - | chr3.4:61732008-61732027 | MS.gene38520:intron | 35.0% |
| ! | CAAAATCCTGCGATTTTGAA+TGG | - | chr3.4:61733476-61733495 | MS.gene38520:CDS | 35.0% |
| ! | GATAGGATTTTGCCTGTTTT+TGG | - | chr3.4:61733532-61733551 | MS.gene38520:CDS | 35.0% |
| ! | GCTCTATACCGAATTCTTTT+CGG | + | chr3.4:61732194-61732213 | None:intergenic | 35.0% |
| ! | GTCTTTTTCCAGGATATGTA+TGG | - | chr3.4:61732662-61732681 | MS.gene38520:CDS | 35.0% |
| ! | TCAAAATCGCAGGATTTTGA+TGG | + | chr3.4:61733475-61733494 | None:intergenic | 35.0% |
| ! | TTATTCCAGTACTTGGTGAA+AGG | + | chr3.4:61734639-61734658 | None:intergenic | 35.0% |
| ! | TTTTATGCGGTCAACATAAG+TGG | - | chr3.4:61734039-61734058 | MS.gene38520:intron | 35.0% |
| ! | TTTTTCCAGGATATGTATGG+TGG | - | chr3.4:61732665-61732684 | MS.gene38520:CDS | 35.0% |
| !! | ACATTGTTCTAAAATCGGGA+TGG | - | chr3.4:61731881-61731900 | MS.gene38520:CDS | 35.0% |
| !! | ACTACTTTGAAGTCAATAGG+TGG | - | chr3.4:61732692-61732711 | MS.gene38520:CDS | 35.0% |
| !! | GTCCGACATTGTTCTAAAAT+CGG | - | chr3.4:61731876-61731895 | MS.gene38520:CDS | 35.0% |
| !! | GTTAAGTGATGGATTGGTTA+TGG | + | chr3.4:61735177-61735196 | None:intergenic | 35.0% |
| !! | GTTGGTGATATGGATGATAA+TGG | + | chr3.4:61734763-61734782 | None:intergenic | 35.0% |
| !! | TCCGACATTGTTCTAAAATC+GGG | - | chr3.4:61731877-61731896 | MS.gene38520:CDS | 35.0% |
| !!! | CACATTTTTGGTCTTTTTCC+AGG | - | chr3.4:61732652-61732671 | MS.gene38520:CDS | 35.0% |
| !!! | TCCCGATTTTAGAACAATGT+CGG | + | chr3.4:61731881-61731900 | None:intergenic | 35.0% |
| AAACTTCCTTCAGACCTTTC+TGG | - | chr3.4:61734316-61734335 | MS.gene38520:CDS | 40.0% | |
| AAAGCAATAGTAGGTGCAAG+TGG | - | chr3.4:61734942-61734961 | MS.gene38520:intron | 40.0% | |
| AACAACATGGTAAGCTTCCA+TGG | - | chr3.4:61732765-61732784 | MS.gene38520:intron | 40.0% | |
| AAGTTCCTTTCACCAAGTAC+TGG | - | chr3.4:61734631-61734650 | MS.gene38520:intron | 40.0% | |
| AATTTGTCTATGGACCCCAA+GGG | + | chr3.4:61734344-61734363 | None:intergenic | 40.0% | |
| ACAAATGTTTCGGACCATTC+TGG | - | chr3.4:61735379-61735398 | MS.gene38520:CDS | 40.0% | |
| ACAACATGGTAAGCTTCCAT+GGG | - | chr3.4:61732766-61732785 | MS.gene38520:intron | 40.0% | |
| AGAGAATTCCTTAGAAGCAG+GGG | - | chr3.4:61735307-61735326 | MS.gene38520:CDS | 40.0% | |
| AGCGGTTTCTCTCATATCAA+AGG | + | chr3.4:61732045-61732064 | None:intergenic | 40.0% | |
| AGGAATTCTCTGATATCAGC+AGG | + | chr3.4:61735298-61735317 | None:intergenic | 40.0% | |
| ATCACCAACTATTGCCCTAA+AGG | - | chr3.4:61734774-61734793 | MS.gene38520:intron | 40.0% | |
| ATGGATGTTATCCATGAAGG+GGG | - | chr3.4:61731900-61731919 | MS.gene38520:CDS | 40.0% | |
| ATTGGGTCAATTTACGAACC+GGG | - | chr3.4:61733403-61733422 | MS.gene38520:intron | 40.0% | |
| CAGAGAATTCCTTAGAAGCA+GGG | - | chr3.4:61735306-61735325 | MS.gene38520:CDS | 40.0% | |
| CATAAAAACCTCTGCTGTTC+CGG | + | chr3.4:61734984-61735003 | None:intergenic | 40.0% | |
| CATAGCAAAGTCCCAAAAAC+AGG | + | chr3.4:61733547-61733566 | None:intergenic | 40.0% | |
| CGATATAGCATAGCAAAGTC+GGG | - | chr3.4:61733186-61733205 | MS.gene38520:intron | 40.0% | |
| CTAACTATGAAGCACGGATA+CGG | + | chr3.4:61732553-61732572 | None:intergenic | 40.0% | |
| CTGAGATAATTGCTCGTAGA+GGG | - | chr3.4:61732807-61732826 | MS.gene38520:CDS | 40.0% | |
| GATATGCTTTCTCCCAAGTT+TGG | - | chr3.4:61734442-61734461 | MS.gene38520:CDS | 40.0% | |
| GATGGATGTTATCCATGAAG+GGG | - | chr3.4:61731899-61731918 | MS.gene38520:CDS | 40.0% | |
| GGACTTTACTTCAAGTCGAA+AGG | - | chr3.4:61733092-61733111 | MS.gene38520:intron | 40.0% | |
| GGAGAAGTGAAAGCAATAGT+AGG | - | chr3.4:61734933-61734952 | MS.gene38520:intron | 40.0% | |
| GGAGGGCTAAAATCGTTAAT+CGG | - | chr3.4:61735110-61735129 | MS.gene38520:intron | 40.0% | |
| GGATGGATGTTATCCATGAA+GGG | - | chr3.4:61731898-61731917 | MS.gene38520:CDS | 40.0% | |
| GGCTAAAGGGATATTAACCA+AGG | - | chr3.4:61733057-61733076 | MS.gene38520:intron | 40.0% | |
| GTTTCGCATCAGTTAAGTGA+TGG | + | chr3.4:61735188-61735207 | None:intergenic | 40.0% | |
| TATGGTACACGTCAAGGAAA+CGG | + | chr3.4:61734593-61734612 | None:intergenic | 40.0% | |
| TATTGCCACCATACATATCC+TGG | + | chr3.4:61732673-61732692 | None:intergenic | 40.0% | |
| TCAGAGAATTCCTTAGAAGC+AGG | - | chr3.4:61735305-61735324 | MS.gene38520:CDS | 40.0% | |
| TCGAAAGGGAGTAGCAAAAT+CGG | - | chr3.4:61733107-61733126 | MS.gene38520:intron | 40.0% | |
| TTCAAACTCGGGTATATCCA+TGG | - | chr3.4:61733824-61733843 | MS.gene38520:intron | 40.0% | |
| TTCGCAGCTAATACCAAACT+GGG | - | chr3.4:61735225-61735244 | MS.gene38520:CDS | 40.0% | |
| TTTCGCAGCTAATACCAAAC+TGG | - | chr3.4:61735224-61735243 | MS.gene38520:CDS | 40.0% | |
| ! | AGTCGCAAAAACCAGGATTT+TGG | - | chr3.4:61733592-61733611 | MS.gene38520:CDS | 40.0% |
| ! | CAACGGTGTTAGAAAGATTG+TGG | - | chr3.4:61735408-61735427 | MS.gene38520:CDS | 40.0% |
| ! | CGATTTTGTGCGACTTTGAT+AGG | - | chr3.4:61733515-61733534 | MS.gene38520:CDS | 40.0% |
| ! | CTGATTTTTCCATCTGATCG+CGG | + | chr3.4:61732853-61732872 | None:intergenic | 40.0% |
| ! | CTTAAAAGCACAAAGAGGAG+CGG | + | chr3.4:61732063-61732082 | None:intergenic | 40.0% |
| ! | GGACACATTTTTCATAGGCA+TGG | + | chr3.4:61734689-61734708 | None:intergenic | 40.0% |
| ! | GGTTATGGAAAAGTATGCGT+AGG | + | chr3.4:61735162-61735181 | None:intergenic | 40.0% |
| ! | GTATCGTTTAAGGTCTTCCA+CGG | + | chr3.4:61733653-61733672 | None:intergenic | 40.0% |
| ! | GTCGCAAAAACCAGGATTTT+GGG | - | chr3.4:61733593-61733612 | MS.gene38520:CDS | 40.0% |
| ! | GTGGAGCATTTATGCTTCTT+AGG | - | chr3.4:61731997-61732016 | MS.gene38520:intron | 40.0% |
| !! | AATTGGTGATGGTAGGTAAC+CGG | - | chr3.4:61734190-61734209 | MS.gene38520:intron | 40.0% |
| !! | ACTGGGTTAGTTATGAGATC+TGG | - | chr3.4:61735242-61735261 | MS.gene38520:CDS | 40.0% |
| !! | AGAACCTTTAGGGCAATAGT+TGG | + | chr3.4:61734781-61734800 | None:intergenic | 40.0% |
| !! | AGTCCCGATTTTGATAACCT+TGG | + | chr3.4:61733077-61733096 | None:intergenic | 40.0% |
| !! | GAAGTCGTTTTATGCTGTCA+CGG | - | chr3.4:61735024-61735043 | MS.gene38520:intron | 40.0% |
| !! | GACCATTCTGGAACAAACAA+CGG | - | chr3.4:61735391-61735410 | MS.gene38520:CDS | 40.0% |
| !! | GCATCAGTTAAGTGATGGAT+TGG | + | chr3.4:61735183-61735202 | None:intergenic | 40.0% |
| !! | TAGGGCAATAGTTGGTGATA+TGG | + | chr3.4:61734773-61734792 | None:intergenic | 40.0% |
| !!! | CTGTTTTTGGGACTTTGCTA+TGG | - | chr3.4:61733545-61733564 | MS.gene38520:CDS | 40.0% |
| AACGTCGTTAACATGACCAG+TGG | + | chr3.4:61732349-61732368 | None:intergenic | 45.0% | |
| AATACCACTTGAACCTGGAC+TGG | + | chr3.4:61731973-61731992 | None:intergenic | 45.0% | |
| AATAGTAGGTGCAAGTGGAG+GGG | - | chr3.4:61734947-61734966 | MS.gene38520:intron | 45.0% | |
| ACATTATTCCGGAACAGCAG+AGG | - | chr3.4:61734973-61734992 | MS.gene38520:intron | 45.0% | |
| AGAACAATGTCGGACATCAG+TGG | + | chr3.4:61731871-61731890 | None:intergenic | 45.0% | |
| AGTCCAGGTTCAAGTGGTAT+TGG | - | chr3.4:61731972-61731991 | MS.gene38520:CDS | 45.0% | |
| CAACTTACCAGCATCGTTAC+AGG | + | chr3.4:61733754-61733773 | None:intergenic | 45.0% | |
| CAATAGTAGGTGCAAGTGGA+GGG | - | chr3.4:61734946-61734965 | MS.gene38520:intron | 45.0% | |
| CAATTTGTCTATGGACCCCA+AGG | + | chr3.4:61734345-61734364 | None:intergenic | 45.0% | |
| CACCGTTGTTTGTTCCAGAA+TGG | + | chr3.4:61735396-61735415 | None:intergenic | 45.0% | |
| CATGTCCTAAAACCCTTTGC+TGG | - | chr3.4:61735331-61735350 | MS.gene38520:CDS | 45.0% | |
| CCAATTGCATGCATTCGCAA+CGG | + | chr3.4:61734176-61734195 | None:intergenic | 45.0% | |
| CGAAAGGGAGTAGCAAAATC+GGG | - | chr3.4:61733108-61733127 | MS.gene38520:intron | 45.0% | |
| CGAATGCATGCAATTGGTGA+TGG | - | chr3.4:61734179-61734198 | MS.gene38520:intron | 45.0% | |
| CGACTTAAGTCCCAAAATCC+TGG | + | chr3.4:61733606-61733625 | None:intergenic | 45.0% | |
| CTACGAGCAATTATCTCAGC+AGG | + | chr3.4:61732806-61732825 | None:intergenic | 45.0% | |
| CTGTAACGATGCTGGTAAGT+TGG | - | chr3.4:61733752-61733771 | MS.gene38520:intron | 45.0% | |
| CTGTCGCTAACTATGAAGCA+CGG | + | chr3.4:61732559-61732578 | None:intergenic | 45.0% | |
| GAAGGAAAACCACCCTTTCT+CGG | + | chr3.4:61735445-61735464 | None:intergenic | 45.0% | |
| GAGATCTGGACAACTCCATA+TGG | - | chr3.4:61735256-61735275 | MS.gene38520:CDS | 45.0% | |
| GCTGAGATAATTGCTCGTAG+AGG | - | chr3.4:61732806-61732825 | MS.gene38520:CDS | 45.0% | |
| GGGATGGATGTTATCCATGA+AGG | - | chr3.4:61731897-61731916 | MS.gene38520:CDS | 45.0% | |
| GGTCCAAATGCTTTCTATGG+TGG | - | chr3.4:61732998-61733017 | MS.gene38520:intron | 45.0% | |
| GTTAGCTAATGGTGCAGCAA+AGG | - | chr3.4:61732019-61732038 | MS.gene38520:intron | 45.0% | |
| TACGCAAAGTCGCAAAAACC+AGG | - | chr3.4:61733585-61733604 | MS.gene38520:CDS | 45.0% | |
| TCCTAAAACCCTTTGCTGGT+GGG | - | chr3.4:61735335-61735354 | MS.gene38520:CDS | 45.0% | |
| TGGAGGGGCAAACATTATTC+CGG | - | chr3.4:61734962-61734981 | MS.gene38520:intron | 45.0% | |
| TGGGGTCCATAGACAAATTG+AGG | - | chr3.4:61734345-61734364 | MS.gene38520:CDS | 45.0% | |
| TGGTCTAGCAATAGCAGTTC+CGG | - | chr3.4:61732712-61732731 | MS.gene38520:CDS | 45.0% | |
| TGTTCAGCAGCTGTAACACA+AGG | + | chr3.4:61734282-61734301 | None:intergenic | 45.0% | |
| ! | AGAAAGGGTGGTTTTCCTTC+AGG | - | chr3.4:61735445-61735464 | MS.gene38520:CDS | 45.0% |
| ! | ATTTTTCCATCTGATCGCGG+AGG | + | chr3.4:61732850-61732869 | None:intergenic | 45.0% |
| ! | CGCTCCTCTTTGTGCTTTTA+AGG | - | chr3.4:61732061-61732080 | MS.gene38520:intron | 45.0% |
| !! | GATGATAATGGTCTCTTCCC+TGG | + | chr3.4:61734751-61734770 | None:intergenic | 45.0% |
| !! | GGTCCACCATAGAAAGCATT+TGG | + | chr3.4:61733004-61733023 | None:intergenic | 45.0% |
| !! | GTGGCTGCTGCTTTATGTTT+GGG | - | chr3.4:61731942-61731961 | MS.gene38520:CDS | 45.0% |
| !! | TACAAGTGTTGGTGTCGTGT+CGG | + | chr3.4:61732443-61732462 | None:intergenic | 45.0% |
| !! | TGCATGCAATTGGTGATGGT+AGG | - | chr3.4:61734183-61734202 | MS.gene38520:intron | 45.0% |
| !! | TGGCTGCTGCTTTATGTTTG+GGG | - | chr3.4:61731943-61731962 | MS.gene38520:CDS | 45.0% |
| !! | TGTGGCTGCTGCTTTATGTT+TGG | - | chr3.4:61731941-61731960 | MS.gene38520:CDS | 45.0% |
| !! | TTGGAAAGGTGTTAAGCCAC+TGG | - | chr3.4:61732330-61732349 | MS.gene38520:intron | 45.0% |
| !!! | AGCTGGTGGTGGAACATTTT+TGG | + | chr3.4:61734710-61734729 | None:intergenic | 45.0% |
| !!! | CAGCAAAGGGTTTTAGGACA+TGG | + | chr3.4:61735333-61735352 | None:intergenic | 45.0% |
| ACACAAACACCGGATACGAC+AGG | + | chr3.4:61732530-61732549 | None:intergenic | 50.0% | |
| ACGGATACGGACACAAACAC+CGG | + | chr3.4:61732540-61732559 | None:intergenic | 50.0% | |
| ATCGTCTGATCTCGATCCAG+TGG | + | chr3.4:61734068-61734087 | None:intergenic | 50.0% | |
| CAAATTGCCCCACCAGCAAA+GGG | + | chr3.4:61735346-61735365 | None:intergenic | 50.0% | |
| CACAAACACCGGATACGACA+GGG | + | chr3.4:61732529-61732548 | None:intergenic | 50.0% | |
| CACATGGCGTGGAAACAACA+TGG | - | chr3.4:61732752-61732771 | MS.gene38520:intron | 50.0% | |
| CCACCAATACCACTTGAACC+TGG | + | chr3.4:61731978-61731997 | None:intergenic | 50.0% | |
| CCGTTGCGAATGCATGCAAT+TGG | - | chr3.4:61734173-61734192 | MS.gene38520:intron | 50.0% | |
| CCTAAAACCCTTTGCTGGTG+GGG | - | chr3.4:61735336-61735355 | MS.gene38520:CDS | 50.0% | |
| CCTAAGTATGCCTCCTCCTT+CGG | - | chr3.4:61733723-61733742 | MS.gene38520:intron | 50.0% | |
| CGCAATGCTCGACCAAACTT+GGG | + | chr3.4:61734457-61734476 | None:intergenic | 50.0% | |
| CGTTAGCGACCTATGAAGCA+CGG | - | chr3.4:61732365-61732384 | MS.gene38520:intron | 50.0% | |
| CTAAGTATGCCTCCTCCTTC+GGG | - | chr3.4:61733724-61733743 | MS.gene38520:intron | 50.0% | |
| GCAATAGTAGGTGCAAGTGG+AGG | - | chr3.4:61734945-61734964 | MS.gene38520:intron | 50.0% | |
| GCAGTCAGTGATCCGAGAAA+GGG | - | chr3.4:61735430-61735449 | MS.gene38520:CDS | 50.0% | |
| GGCTCCAAGGTTCTATCATC+AGG | - | chr3.4:61735045-61735064 | MS.gene38520:intron | 50.0% | |
| GGTCTAGCAATAGCAGTTCC+GGG | - | chr3.4:61732713-61732732 | MS.gene38520:CDS | 50.0% | |
| GTCCTAAAACCCTTTGCTGG+TGG | - | chr3.4:61735334-61735353 | MS.gene38520:CDS | 50.0% | |
| TCAACATAAGTGGACGCCAC+TGG | - | chr3.4:61734049-61734068 | MS.gene38520:intron | 50.0% | |
| TCGCAATGCTCGACCAAACT+TGG | + | chr3.4:61734458-61734477 | None:intergenic | 50.0% | |
| TTTATGCTGTCACGGCTCCA+AGG | - | chr3.4:61735032-61735051 | MS.gene38520:intron | 50.0% | |
| ! | CCAGGTTCAAGTGGTATTGG+TGG | - | chr3.4:61731975-61731994 | MS.gene38520:CDS | 50.0% |
| ! | GTTGTTTCCACGCCATGTGA+AGG | + | chr3.4:61732751-61732770 | None:intergenic | 50.0% |
| ! | TTTGGTCGAGCATTGCGAAG+AGG | - | chr3.4:61734460-61734479 | MS.gene38520:CDS | 50.0% |
| !! | AGAACTTGCTGGCCTTCACA+TGG | - | chr3.4:61732736-61732755 | MS.gene38520:intron | 50.0% |
| !! | GCTTTCTATGGTGGACCGAT+TGG | - | chr3.4:61733007-61733026 | MS.gene38520:intron | 50.0% |
| !! | GGCTGCTGCTTTATGTTTGG+GGG | - | chr3.4:61731944-61731963 | MS.gene38520:CDS | 50.0% |
| !! | GGTTCAAGTGGTATTGGTGG+TGG | - | chr3.4:61731978-61731997 | MS.gene38520:CDS | 50.0% |
| ACAAAGTTGGCAGGAGCTGG+TGG | + | chr3.4:61734724-61734743 | None:intergenic | 55.0% | |
| ACACGACACGTGTCTGACAC+CGG | + | chr3.4:61732414-61732433 | None:intergenic | 55.0% | |
| ATCGTTACAGGTCCACCCGA+AGG | + | chr3.4:61733742-61733761 | None:intergenic | 55.0% | |
| CGCAACGGTGACTAGACTGT+TGG | + | chr3.4:61734161-61734180 | None:intergenic | 55.0% | |
| CGGAGTGTGTTTGCACCACA+TGG | - | chr3.4:61732902-61732921 | MS.gene38520:CDS | 55.0% | |
| GCAAATTGCCCCACCAGCAA+AGG | + | chr3.4:61735347-61735366 | None:intergenic | 55.0% | |
| GGCAGTCAGTGATCCGAGAA+AGG | - | chr3.4:61735429-61735448 | MS.gene38520:CDS | 55.0% | |
| GGCTTTACAAGTCTCGCCCA+TGG | + | chr3.4:61732785-61732804 | None:intergenic | 55.0% | |
| GTCAGTGATCCGAGAAAGGG+TGG | - | chr3.4:61735433-61735452 | MS.gene38520:CDS | 55.0% | |
| GTCAGTGTCCCTGTCGTATC+CGG | - | chr3.4:61732518-61732537 | MS.gene38520:CDS | 55.0% | |
| GTTGCCAGTCCAGGTTCAAG+TGG | - | chr3.4:61731966-61731985 | MS.gene38520:CDS | 55.0% | |
| TGAAGGCCAGCAAGTTCTCC+CGG | + | chr3.4:61732734-61732753 | None:intergenic | 55.0% | |
| ! | CCCCACCAGCAAAGGGTTTT+AGG | + | chr3.4:61735339-61735358 | None:intergenic | 55.0% |
| ! | CCGAAGGAGGAGGCATACTT+AGG | + | chr3.4:61733726-61733745 | None:intergenic | 55.0% |
| !! | GAGGAGTGTCCGTGCTTCAT+AGG | + | chr3.4:61732377-61732396 | None:intergenic | 55.0% |
| !! | TCCTCGCGTTAGGAGTGTTC+CGG | - | chr3.4:61732392-61732411 | MS.gene38520:intron | 55.0% |
| !! | TGTTGGTGTCGTGTCGGTGT+CGG | + | chr3.4:61732437-61732456 | None:intergenic | 55.0% |
| AAGTTGGCAGGAGCTGGTGG+TGG | + | chr3.4:61734721-61734740 | None:intergenic | 60.0% | |
| ACCGGAACACTCCTAACGCG+AGG | + | chr3.4:61732396-61732415 | None:intergenic | 60.0% | |
| AGTATGCCTCCTCCTTCGGG+TGG | - | chr3.4:61733727-61733746 | MS.gene38520:intron | 60.0% | |
| CCACAGCTGCATCCACTGCA+TGG | + | chr3.4:61731926-61731945 | None:intergenic | 60.0% | |
| CCATGCAGTGGATGCAGCTG+TGG | - | chr3.4:61731923-61731942 | MS.gene38520:CDS | 60.0% | |
| CTGCCAACTTTGTCGCGCCA+GGG | - | chr3.4:61734731-61734750 | MS.gene38520:intron | 60.0% | |
| CTTCCCTGGCGCGACAAAGT+TGG | + | chr3.4:61734737-61734756 | None:intergenic | 60.0% | |
| GAAGCTCCTCCGCGATCAGA+TGG | - | chr3.4:61732841-61732860 | MS.gene38520:CDS | 60.0% | |
| GCAGTTCCGGGAGAACTTGC+TGG | - | chr3.4:61732725-61732744 | MS.gene38520:intron | 60.0% | |
| GCGACAAAGTTGGCAGGAGC+TGG | + | chr3.4:61734727-61734746 | None:intergenic | 60.0% | |
| GGACATGGCCCCTGCTTCTA+AGG | + | chr3.4:61735318-61735337 | None:intergenic | 60.0% | |
| GGGTGGACCTGTAACGATGC+TGG | - | chr3.4:61733744-61733763 | MS.gene38520:intron | 60.0% | |
| GTTACAGGTCCACCCGAAGG+AGG | + | chr3.4:61733739-61733758 | None:intergenic | 60.0% | |
| TGTTTGGGGGTTGCCAGTCC+AGG | - | chr3.4:61731957-61731976 | MS.gene38520:CDS | 60.0% | |
| ! | AGACCTTTCTGGCGCCCTTG+GGG | - | chr3.4:61734327-61734346 | MS.gene38520:CDS | 60.0% |
| ! | AGGGCGCCAGAAAGGTCTGA+AGG | + | chr3.4:61734325-61734344 | None:intergenic | 60.0% |
| ! | CAGACCTTTCTGGCGCCCTT+GGG | - | chr3.4:61734326-61734345 | MS.gene38520:CDS | 60.0% |
| ! | TCAGACCTTTCTGGCGCCCT+TGG | - | chr3.4:61734325-61734344 | MS.gene38520:CDS | 60.0% |
| !! | TTGCTGGCCTTCACATGGCG+TGG | - | chr3.4:61732741-61732760 | MS.gene38520:intron | 60.0% |
| ACAGGTCCACCCGAAGGAGG+AGG | + | chr3.4:61733736-61733755 | None:intergenic | 65.0% | |
| CCACTGCATGGCCCCCTTCA+TGG | + | chr3.4:61731914-61731933 | None:intergenic | 65.0% | |
| CCATGAAGGGGGCCATGCAG+TGG | - | chr3.4:61731911-61731930 | MS.gene38520:CDS | 65.0% | |
| CCTGCCAACTTTGTCGCGCC+AGG | - | chr3.4:61734730-61734749 | MS.gene38520:intron | 65.0% | |
| CCTGGCGCGACAAAGTTGGC+AGG | + | chr3.4:61734733-61734752 | None:intergenic | 65.0% | |
| GCACGGACACTCCTCGCGTT+AGG | - | chr3.4:61732382-61732401 | MS.gene38520:intron | 65.0% | |
| !! | GGACCCCAAGGGCGCCAGAA+AGG | + | chr3.4:61734333-61734352 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 61731765 | 61735474 | 61731765 | ID=MS.gene38520 |
| chr3.4 | mRNA | 61731765 | 61735474 | 61731765 | ID=MS.gene38520.t1;Parent=MS.gene38520 |
| chr3.4 | exon | 61735157 | 61735474 | 61735157 | ID=MS.gene38520.t1.exon1;Parent=MS.gene38520.t1 |
| chr3.4 | CDS | 61735157 | 61735474 | 61735157 | ID=cds.MS.gene38520.t1;Parent=MS.gene38520.t1 |
| chr3.4 | exon | 61734223 | 61734565 | 61734223 | ID=MS.gene38520.t1.exon2;Parent=MS.gene38520.t1 |
| chr3.4 | CDS | 61734223 | 61734565 | 61734223 | ID=cds.MS.gene38520.t1;Parent=MS.gene38520.t1 |
| chr3.4 | exon | 61733474 | 61733616 | 61733474 | ID=MS.gene38520.t1.exon3;Parent=MS.gene38520.t1 |
| chr3.4 | CDS | 61733474 | 61733616 | 61733474 | ID=cds.MS.gene38520.t1;Parent=MS.gene38520.t1 |
| chr3.4 | exon | 61732781 | 61732947 | 61732781 | ID=MS.gene38520.t1.exon4;Parent=MS.gene38520.t1 |
| chr3.4 | CDS | 61732781 | 61732947 | 61732781 | ID=cds.MS.gene38520.t1;Parent=MS.gene38520.t1 |
| chr3.4 | exon | 61732444 | 61732732 | 61732444 | ID=MS.gene38520.t1.exon5;Parent=MS.gene38520.t1 |
| chr3.4 | CDS | 61732444 | 61732732 | 61732444 | ID=cds.MS.gene38520.t1;Parent=MS.gene38520.t1 |
| chr3.4 | exon | 61732173 | 61732277 | 61732173 | ID=MS.gene38520.t1.exon6;Parent=MS.gene38520.t1 |
| chr3.4 | CDS | 61732173 | 61732277 | 61732173 | ID=cds.MS.gene38520.t1;Parent=MS.gene38520.t1 |
| chr3.4 | exon | 61731765 | 61732007 | 61731765 | ID=MS.gene38520.t1.exon7;Parent=MS.gene38520.t1 |
| chr3.4 | CDS | 61731765 | 61732007 | 61731765 | ID=cds.MS.gene38520.t1;Parent=MS.gene38520.t1 |
| Gene Sequence |
| Protein sequence |
